Lcy04g005470 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g005470
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	serine/threonine-protein phosphatase 7 long form homolog
Location	Chr04: 33912852 .. 33913807 (-)
RNA-Seq Expression	Lcy04g005470
Synteny	Lcy04g005470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGATTAGGATTTATTCAGTTGGACTGGCACTTCATCACCGCTCTTGTCGAGAAATGGAGACCAGAGACACATACATTTCATGTGCTTGGTGGGGAGACGACTATTACGCTACAGGACGTAGCAGTGTTACTCGGGTTACCAGTGGATGGCGAGCCGGTCACTGGATCCCTAAAACATGATTGGAAAGAGATGTGTTATAGGTTACTTGGTGTCACTGCTGGAAATAACGTCATTAAAGTATCCAGATTAAGTTTGCCTTGGTTAGCAACTCAATTTCCAAGATTGGATGACAATGTTGATGATATAACAGTGGAGAGGTATGCTCGGGCATACATTTTGCAGTTGATGGGTGGGAGCTTATTCTCTAATAAGGCTGGAGACAGGGTATATTTAATGTTCCTGCTATTGTTAGAAAACTTCAAGGTTACAGGACGATATTCTTAGGGTGGAACGTGCTTAGCATGGTTGTATAGAAAACTATGCAAGGCCACGAGATTAGATGCTTGCGAGATCGAGGGGCCCTTGATTCTCCTACAACTTTGGGGTTGGGAACGATTTCCAATGATGGCTTCTCAACGTCGCCACATCAATGATCATGAATTGGTTGGTCGACCATGCAGTTCTCGGTATGTTGATTGATTACAATTTGAATTCATGTTCTATTTGATCGATATAATTGAATCAAAAATTAATTTAACATTGAATGTAGGTGGAGAGACCAATTTTGTGTGACTGGATCAGCTACACATGTATAGATCCAGTATAGATACATGTTTGACCATCTAAAACCTGATTTGGTACGTACTTAGTATTTGAGAATTTTATTATAGTTTTATTTATTTTAATCGTACCTCACCTTTTATGTTGTTGTGTTTTAGATGATATGGGAACCATACAACCATGTCATGGCCACTTTACCTCCTTACTGTAACAATGGTCATGACATTTGA

mRNA sequence

ATGGCTAGATTAGGATTTATTCAGTTGGACTGGCACTTCATCACCGCTCTTGTCGAGAAATGGAGACCAGAGACACATACATTTCATGTGCTTGGTGGGGAGACGACTATTACGCTACAGGACGTAGCAGTGTTACTCGGGTTACCAGTGGATGGCGAGCCGGTCACTGGATCCCTAAAACATGATTGGAAAGAGATGTGTTATAGGTTACTTGGTGTCACTGCTGGAAATAACGTCATTAAAGTATCCAGATTAAGTTTGCCTTGGTTAGCAACTCAATTTCCAAGATTGGATGACAATGTTGATGATATAACAGTGGAGAGGTATGCTCGGGCATACATTTTGCAGTTGATGGGTGGGAGCTTATTCTCTAATAAGGCTGGAGACAGGATGATATGGGAACCATACAACCATGTCATGGCCACTTTACCTCCTTACTGTAACAATGGTCATGACATTTGA

Coding sequence (CDS)

ATGGCTAGATTAGGATTTATTCAGTTGGACTGGCACTTCATCACCGCTCTTGTCGAGAAATGGAGACCAGAGACACATACATTTCATGTGCTTGGTGGGGAGACGACTATTACGCTACAGGACGTAGCAGTGTTACTCGGGTTACCAGTGGATGGCGAGCCGGTCACTGGATCCCTAAAACATGATTGGAAAGAGATGTGTTATAGGTTACTTGGTGTCACTGCTGGAAATAACGTCATTAAAGTATCCAGATTAAGTTTGCCTTGGTTAGCAACTCAATTTCCAAGATTGGATGACAATGTTGATGATATAACAGTGGAGAGGTATGCTCGGGCATACATTTTGCAGTTGATGGGTGGGAGCTTATTCTCTAATAAGGCTGGAGACAGGATGATATGGGAACCATACAACCATGTCATGGCCACTTTACCTCCTTACTGTAACAATGGTCATGACATTTGA

Protein sequence

MARLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLKHDWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGGSLFSNKAGDRMIWEPYNHVMATLPPYCNNGHDI

Homology

[Close]

BLAST of Lcy04g005470 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.3e-32
Identity = 63/125 (50.40%), Postives = 87/125 (69.60%), Query Frame = 0


Query: 3   RLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLKHD 62
           ++ FIQLD+  ITALVE+WRPETHTFH+  GE T+TLQDV +LLGL VDG  VTGS K++
Sbjct: 74  KVAFIQLDYALITALVERWRPETHTFHLPAGEITVTLQDVNILLGLRVDGPAVTGSTKYN 133

Query: 63  WKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGGSL 122
           W ++C  LLG   G   +  S +SL WL   F  L  + D++T++ + RA++L LM G L
Sbjct: 134 WADLCEDLLGHRPGPKDLHGSHVSLAWLRENFRNLPADPDEVTLKCHTRAFVLALMSGFL 193

Query: 123 FSNKA 128
           + +K+
Sbjct: 194 YGDKS 198

[Close]

BLAST of Lcy04g005470 vs. ExPASy Swiss-Prot
Match: F4IFD0 (Protein MAIN-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=At2g04865 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.4e-24
Identity = 54/131 (41.22%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 1   MARLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLK 60
           + R+  I LD   I+ALVE+WR ET+TFH   GE T+TL+D+A+LLGL +DG+PV G   
Sbjct: 65  LRRIPAISLDNPLISALVERWRRETNTFHFTVGEMTVTLEDIALLLGLGIDGKPVIGLTY 124

Query: 61  HDWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGG 120
                +C R LG +  +N      + L WL   F    D+     VER  RAY+L L+G 
Sbjct: 125 TTCSAVCERYLGKSPASNSASGGMVKLSWLKDNFSECPDDASFEEVERRTRAYLLYLVGS 184

Query: 121 SLFSNKAGDRM 132
           ++FS   G+++
Sbjct: 185 TIFSTTTGNKV 195

[Close]

BLAST of Lcy04g005470 vs. ExPASy Swiss-Prot
Match: Q9SK32 (Protein MAIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=MAIL1 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.8e-23
Identity = 55/133 (41.35%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 3   RLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLKHD 62
           ++G + L+   I+ALVE+WR ET+TFH+  GE TITL +VA++LGL +DG+P+ GS   D
Sbjct: 65  KIGPMSLNNSLISALVERWRRETNTFHLPLGEMTITLDEVALVLGLEIDGDPIVGSKVGD 124

Query: 63  --WKEMCYRLLG--VTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLM 122
               +MC RLLG   +A N  +  SR+ L WL   F    ++     V+ + RAY+L L+
Sbjct: 125 EVAMDMCGRLLGKLPSAANKEVNCSRVKLNWLKRTFSECPEDASFDVVKCHTRAYLLYLI 184

Query: 123 GGSLFSNKAGDRM 132
           G ++F+   GD++
Sbjct: 185 GSTIFATTDGDKV 197

[Close]

BLAST of Lcy04g005470 vs. ExPASy Swiss-Prot
Match: Q9LMT7 (Protein MAINTENANCE OF MERISTEMS OS=Arabidopsis thaliana OX=3702 GN=MAIN PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.7e-18
Identity = 47/123 (38.21%), Postives = 72/123 (58.54%), Query Frame = 0


Query: 4   LGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTG--SLKH 63
           +G I L+   I+ALVE+WR ET+TFH   GE TITL +V+++LGL VDG+PV G      
Sbjct: 57  VGSISLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAVDGKPVVGVKEKDE 116

Query: 64  DWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGGS 123
           D  ++C RLLG       +  +R++  WL   F           +E + RAY++ ++G +
Sbjct: 117 DPSQVCLRLLG-KLPKGELSGNRVTAKWLKESFAECPKGATMKEIEYHTRAYLIYIVGST 176

Query: 124 LFS 125
           +F+
Sbjct: 177 IFA 178

[Close]

BLAST of Lcy04g005470 vs. ExPASy TrEMBL
Match: A0A5D3CIZ8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00630 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.0e-47
Identity = 88/153 (57.52%), Postives = 112/153 (73.20%), Query Frame = 0


Query: 1   MARLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLK 60
           +ARLGF+QLDWH I AL+E+WRPE HTFH+  GE TITLQDV VL+GLP DGEPVT  + 
Sbjct: 363 LARLGFVQLDWHLIIALLERWRPEMHTFHMSVGECTITLQDVKVLVGLPADGEPVTDQMH 422

Query: 61  HDWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGG 120
             W  +C +LLGV      I+  RLSL WL  +F  L ++ D+ T+ RYARAYILQLMGG
Sbjct: 423 DVWLHVCQKLLGVIPPLEQIRGQRLSLTWLGVEFHELANDADEETITRYARAYILQLMGG 482

Query: 121 SLFSNKAGDRMIWEPYNHVMATLPPYCNNGHDI 154
           S+F++K+   ++WEPY  V+ +LP +C NGHDI
Sbjct: 483 SIFADKSTRYIVWEPYKTVIDSLPHFCTNGHDI 515

[Close]

BLAST of Lcy04g005470 vs. ExPASy TrEMBL
Match: A0A5A7U115 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold199G00010 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 5.5e-46
Identity = 87/153 (56.86%), Postives = 110/153 (71.90%), Query Frame = 0


Query: 1   MARLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLK 60
           +ARLGFIQLDWH I AL+E+WRPE HTFH+  GE TITLQDV VL+GL  DGEPVT  + 
Sbjct: 456 LARLGFIQLDWHLIIALLERWRPEMHTFHMSVGECTITLQDVKVLVGLLADGEPVTDQMH 515

Query: 61  HDWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGG 120
             W  +C +LLGV      I+  RL L WL  +F  L ++ D+ T+ RYARAYILQLMGG
Sbjct: 516 DVWLHICQKLLGVIPPLEQIRGQRLILTWLGAEFHELANDADEETITRYARAYILQLMGG 575

Query: 121 SLFSNKAGDRMIWEPYNHVMATLPPYCNNGHDI 154
           S+F++K+   ++WEPY  V+ +LP +C NGHDI
Sbjct: 576 SIFADKSTRYIVWEPYKTVIDSLPHFCTNGHDI 608

[Close]

BLAST of Lcy04g005470 vs. ExPASy TrEMBL
Match: A0A6J1DJK3 (serine/threonine-protein phosphatase 7 long form homolog OS=Momordica charantia OX=3673 GN=LOC111021487 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.6e-45
Identity = 88/125 (70.40%), Postives = 104/125 (83.20%), Query Frame = 0


Query: 2   ARLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLKH 61
           ARLGFIQLDWHFITALVE+WRPETHTFH+  GE TITL+DVAV LGLPVDGEPVTG + +
Sbjct: 133 ARLGFIQLDWHFITALVERWRPETHTFHMPDGECTITLKDVAVQLGLPVDGEPVTGRVDY 192

Query: 62  DWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGGS 121
           DW+  C  LLGVT G   I+ S+LSLPWLA+QF  L D+ D+ T+ RYARAYI+QL+GGS
Sbjct: 193 DWRGTCQALLGVTPGAAHIRGSKLSLPWLASQFCNLADDADEETIARYARAYIMQLIGGS 252

Query: 122 LFSNK 127
           LF++K
Sbjct: 253 LFADK 257

[Close]

BLAST of Lcy04g005470 vs. ExPASy TrEMBL
Match: A0A2N9J9V0 (PMD domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61530 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.5e-43
Identity = 84/131 (64.12%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 1   MARLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLK 60
           ++RL FI+LDWHFITALVE+WRPETHTFH+  GE TITL+DV++ LGLPVDG PVTG + 
Sbjct: 260 LSRLPFIKLDWHFITALVERWRPETHTFHLPSGEMTITLEDVSIQLGLPVDGLPVTGLID 319

Query: 61  HDWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGG 120
             W+E+C RLLGV   +  +  SRLSL WLA QFP L  + DD+TVERYAR YILQLMGG
Sbjct: 320 SKWRELCIRLLGVDPPSPQLSGSRLSLNWLAQQFPPLAADADDVTVERYARMYILQLMGG 379

Query: 121 SLFSNKAGDRM 132
           S+F++K+ D++
Sbjct: 380 SIFADKSQDKV 390

[Close]

BLAST of Lcy04g005470 vs. ExPASy TrEMBL
Match: A0A2N9FA09 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11895 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.5e-43
Identity = 84/131 (64.12%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 1   MARLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLK 60
           ++RL FI+LDWHFITALVE+WRPETHTFH+  GE TITL+DV++ LGLPVDG PVTG + 
Sbjct: 462 LSRLPFIKLDWHFITALVERWRPETHTFHLPSGEMTITLEDVSIQLGLPVDGLPVTGLID 521

Query: 61  HDWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGG 120
             W+E+C RLLGV   +  +  SRLSL WLA QFP L  + DD+TVERYAR YILQLMGG
Sbjct: 522 SKWRELCIRLLGVDPPSPQLSGSRLSLNWLAQQFPPLAADADDVTVERYARMYILQLMGG 581

Query: 121 SLFSNKAGDRM 132
           S+F++K+ D++
Sbjct: 582 SIFADKSQDKV 592

[Close]

BLAST of Lcy04g005470 vs. NCBI nr
Match: TYK11154.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 199.5 bits (506), Expect = 2.1e-47
Identity = 88/153 (57.52%), Postives = 112/153 (73.20%), Query Frame = 0


Query: 1   MARLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLK 60
           +ARLGF+QLDWH I AL+E+WRPE HTFH+  GE TITLQDV VL+GLP DGEPVT  + 
Sbjct: 363 LARLGFVQLDWHLIIALLERWRPEMHTFHMSVGECTITLQDVKVLVGLPADGEPVTDQMH 422

Query: 61  HDWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGG 120
             W  +C +LLGV      I+  RLSL WL  +F  L ++ D+ T+ RYARAYILQLMGG
Sbjct: 423 DVWLHVCQKLLGVIPPLEQIRGQRLSLTWLGVEFHELANDADEETITRYARAYILQLMGG 482

Query: 121 SLFSNKAGDRMIWEPYNHVMATLPPYCNNGHDI 154
           S+F++K+   ++WEPY  V+ +LP +C NGHDI
Sbjct: 483 SIFADKSTRYIVWEPYKTVIDSLPHFCTNGHDI 515

[Close]

BLAST of Lcy04g005470 vs. NCBI nr
Match: KAA0047926.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-45
Identity = 87/153 (56.86%), Postives = 110/153 (71.90%), Query Frame = 0


Query: 1   MARLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLK 60
           +ARLGFIQLDWH I AL+E+WRPE HTFH+  GE TITLQDV VL+GL  DGEPVT  + 
Sbjct: 456 LARLGFIQLDWHLIIALLERWRPEMHTFHMSVGECTITLQDVKVLVGLLADGEPVTDQMH 515

Query: 61  HDWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGG 120
             W  +C +LLGV      I+  RL L WL  +F  L ++ D+ T+ RYARAYILQLMGG
Sbjct: 516 DVWLHICQKLLGVIPPLEQIRGQRLILTWLGAEFHELANDADEETITRYARAYILQLMGG 575

Query: 121 SLFSNKAGDRMIWEPYNHVMATLPPYCNNGHDI 154
           S+F++K+   ++WEPY  V+ +LP +C NGHDI
Sbjct: 576 SIFADKSTRYIVWEPYKTVIDSLPHFCTNGHDI 608

[Close]

BLAST of Lcy04g005470 vs. NCBI nr
Match: XP_022154173.1 (serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia])

HSP 1 Score: 191.0 bits (484), Expect = 7.3e-45
Identity = 88/125 (70.40%), Postives = 104/125 (83.20%), Query Frame = 0


Query: 2   ARLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLKH 61
           ARLGFIQLDWHFITALVE+WRPETHTFH+  GE TITL+DVAV LGLPVDGEPVTG + +
Sbjct: 133 ARLGFIQLDWHFITALVERWRPETHTFHMPDGECTITLKDVAVQLGLPVDGEPVTGRVDY 192

Query: 62  DWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGGS 121
           DW+  C  LLGVT G   I+ S+LSLPWLA+QF  L D+ D+ T+ RYARAYI+QL+GGS
Sbjct: 193 DWRGTCQALLGVTPGAAHIRGSKLSLPWLASQFCNLADDADEETIARYARAYIMQLIGGS 252

Query: 122 LFSNK 127
           LF++K
Sbjct: 253 LFADK 257

[Close]

BLAST of Lcy04g005470 vs. NCBI nr
Match: XP_022152173.1 (serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 1.5e-42
Identity = 83/127 (65.35%), Postives = 102/127 (80.31%), Query Frame = 0


Query: 1   MARLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLK 60
           +AR+GF QLDWH ITALVE+WRPETHTFH+ GGE TITLQDVA+  GLPVDGEPVTGSL+
Sbjct: 377 VARIGFTQLDWHLITALVERWRPETHTFHMPGGECTITLQDVAIQFGLPVDGEPVTGSLQ 436

Query: 61  HDWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGG 120
           HDW  +C  LLGV      +K SRLSLPWLA+QF +L    D++ ++RY RAYI+QL+GG
Sbjct: 437 HDWATICEDLLGVRP--TQLKGSRLSLPWLASQFTKLPVEADEVMIKRYTRAYIMQLIGG 496

Query: 121 SLFSNKA 128
            LF++K+
Sbjct: 497 FLFADKS 501

[Close]

BLAST of Lcy04g005470 vs. NCBI nr
Match: XP_022152174.1 (uncharacterized protein LOC111019957 isoform X2 [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 1.5e-42
Identity = 83/127 (65.35%), Postives = 102/127 (80.31%), Query Frame = 0


Query: 1   MARLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLK 60
           +AR+GF QLDWH ITALVE+WRPETHTFH+ GGE TITLQDVA+  GLPVDGEPVTGSL+
Sbjct: 377 VARIGFTQLDWHLITALVERWRPETHTFHMPGGECTITLQDVAIQFGLPVDGEPVTGSLQ 436

Query: 61  HDWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGG 120
           HDW  +C  LLGV      +K SRLSLPWLA+QF +L    D++ ++RY RAYI+QL+GG
Sbjct: 437 HDWATICEDLLGVRP--TQLKGSRLSLPWLASQFTKLPVEADEVMIKRYTRAYIMQLIGG 496

Query: 121 SLFSNKA 128
            LF++K+
Sbjct: 497 FLFADKS 501

[Close]

BLAST of Lcy04g005470 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-33
Identity = 63/125 (50.40%), Postives = 87/125 (69.60%), Query Frame = 0


Query: 3   RLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLKHD 62
           ++ FIQLD+  ITALVE+WRPETHTFH+  GE T+TLQDV +LLGL VDG  VTGS K++
Sbjct: 74  KVAFIQLDYALITALVERWRPETHTFHLPAGEITVTLQDVNILLGLRVDGPAVTGSTKYN 133

Query: 63  WKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGGSL 122
           W ++C  LLG   G   +  S +SL WL   F  L  + D++T++ + RA++L LM G L
Sbjct: 134 WADLCEDLLGHRPGPKDLHGSHVSLAWLRENFRNLPADPDEVTLKCHTRAFVLALMSGFL 193

Query: 123 FSNKA 128
           + +K+
Sbjct: 194 YGDKS 198

[Close]

BLAST of Lcy04g005470 vs. TAIR 10
Match: AT2G04865.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-25
Identity = 54/131 (41.22%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 1   MARLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLK 60
           + R+  I LD   I+ALVE+WR ET+TFH   GE T+TL+D+A+LLGL +DG+PV G   
Sbjct: 65  LRRIPAISLDNPLISALVERWRRETNTFHFTVGEMTVTLEDIALLLGLGIDGKPVIGLTY 124

Query: 61  HDWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGG 120
                +C R LG +  +N      + L WL   F    D+     VER  RAY+L L+G 
Sbjct: 125 TTCSAVCERYLGKSPASNSASGGMVKLSWLKDNFSECPDDASFEEVERRTRAYLLYLVGS 184

Query: 121 SLFSNKAGDRM 132
           ++FS   G+++
Sbjct: 185 TIFSTTTGNKV 195

[Close]

BLAST of Lcy04g005470 vs. TAIR 10
Match: AT2G25010.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-24
Identity = 55/133 (41.35%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 3   RLGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLKHD 62
           ++G + L+   I+ALVE+WR ET+TFH+  GE TITL +VA++LGL +DG+P+ GS   D
Sbjct: 65  KIGPMSLNNSLISALVERWRRETNTFHLPLGEMTITLDEVALVLGLEIDGDPIVGSKVGD 124

Query: 63  --WKEMCYRLLG--VTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLM 122
               +MC RLLG   +A N  +  SR+ L WL   F    ++     V+ + RAY+L L+
Sbjct: 125 EVAMDMCGRLLGKLPSAANKEVNCSRVKLNWLKRTFSECPEDASFDVVKCHTRAYLLYLI 184

Query: 123 GGSLFSNKAGDRM 132
           G ++F+   GD++
Sbjct: 185 GSTIFATTDGDKV 197

[Close]

BLAST of Lcy04g005470 vs. TAIR 10
Match: AT1G17930.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 92.4 bits (228), Expect = 3.3e-19
Identity = 47/123 (38.21%), Postives = 72/123 (58.54%), Query Frame = 0


Query: 4   LGFIQLDWHFITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTG--SLKH 63
           +G I L+   I+ALVE+WR ET+TFH   GE TITL +V+++LGL VDG+PV G      
Sbjct: 57  VGSISLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAVDGKPVVGVKEKDE 116

Query: 64  DWKEMCYRLLGVTAGNNVIKVSRLSLPWLATQFPRLDDNVDDITVERYARAYILQLMGGS 123
           D  ++C RLLG       +  +R++  WL   F           +E + RAY++ ++G +
Sbjct: 117 DPSQVCLRLLG-KLPKGELSGNRVTAKWLKESFAECPKGATMKEIEYHTRAYLIYIVGST 176

Query: 124 LFS 125
           +F+
Sbjct: 177 IFA 178

[Close]

BLAST of Lcy04g005470 vs. TAIR 10
Match: AT1G50790.1 (Plant mobile domain protein family )

HSP 1 Score: 56.2 bits (134), Expect = 2.6e-08
Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 14  ITALVEKWRPETHTFHVLGGETTITLQDVAVLLGLPVDGEPVTGSLKHDWKEMCYRL 71
           +  + EKW P+T+TF    GE TITL+DV VLLG  V G PV  +L    KE+  +L
Sbjct: 102 VMGIAEKWCPDTNTFVFSWGEATITLEDVMVLLGFSVLGSPVFATLDSSGKEIMAKL 158

The following BLAST results are available for this feature:

BLAST of Lcy04g005470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNG5	4.3e-32	50.40	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana...	[more]
F4IFD0	4.4e-24	41.22	Protein MAIN-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=At2g04865 PE=1 SV=1	[more]
Q9SK32	4.8e-23	41.35	Protein MAIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=MAIL1 PE=1 SV=1	[more]
Q9LMT7	4.7e-18	38.21	Protein MAINTENANCE OF MERISTEMS OS=Arabidopsis thaliana OX=3702 GN=MAIN PE=1 SV...	[more]

BLAST of Lcy04g005470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CIZ8	1.0e-47	57.52	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5A7U115	5.5e-46	56.86	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A6J1DJK3	3.6e-45	70.40	serine/threonine-protein phosphatase 7 long form homolog OS=Momordica charantia ...	[more]
A0A2N9J9V0	1.5e-43	64.12	PMD domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61530 PE=4...	[more]
A0A2N9FA09	1.5e-43	64.12	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11895 PE=4 SV=1	[more]

BLAST of Lcy04g005470 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11154.1	2.1e-47	57.52	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
KAA0047926.1	1.1e-45	56.86	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
XP_022154173.1	7.3e-45	70.40	serine/threonine-protein phosphatase 7 long form homolog [Momordica charantia]	[more]
XP_022152173.1	1.5e-42	65.35	serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Momordica c...	[more]
XP_022152174.1	1.5e-42	65.35	uncharacterized protein LOC111019957 isoform X2 [Momordica charantia]	[more]

BLAST of Lcy04g005470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48120.1	3.1e-33	50.40	hydrolases;protein serine/threonine phosphatases	[more]
AT2G04865.1	3.1e-25	41.22	Aminotransferase-like, plant mobile domain family protein	[more]
AT2G25010.1	3.4e-24	41.35	Aminotransferase-like, plant mobile domain family protein	[more]
AT1G17930.1	3.3e-19	38.21	Aminotransferase-like, plant mobile domain family protein	[more]
AT1G50790.1	2.6e-08	47.37	Plant mobile domain protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019557	Aminotransferase-like, plant mobile domain	PFAM	PF10536	PMD	coord: 5..130 e-value: 4.9E-30 score: 104.9
None	No IPR available	PANTHER	PTHR46033:SF8	SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG ISOFORM X1	coord: 7..131
IPR044824	Protein MAINTENANCE OF MERISTEMS-like	PANTHER	PTHR46033	PROTEIN MAIN-LIKE 2	coord: 7..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g005470.1	Lcy04g005470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance
biological_process	GO:0048507	meristem development