Lcy04g005410 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g005410
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr04: 33757593 .. 33764300 (+)
RNA-Seq ExpressionLcy04g005410
SyntenyLcy04g005410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGCCATTTTTTCTCTTCTCTTCTCCTCTCTTCCTCCATTGCCGCCGCTCGATCTCCTCATCTTCCGCCATCGCCGATTGCCTCTCCAAGATTTCCTTTGCCTTTCAGAAATGTCGGTGAGTTCATCATCTTCTTCTTCTTCTTGTTTTATCTGTGAATCTTTGATGCAGCTCGATCTCCTCATCTTCCGCCCTCCAATATGCAGATCTGCCGTGTTTGCGTTCGGTTATTTATTTTCTCTTATGGTGAATGTCTGCTGTGTTGATTTGGGGATTTTTAATTGTAATGTGGGAATAGGGTTTTTTATTTTGATTTTGATTTTCAAGATCTCTGTTTCTGTATCCTTTGGTTTCTTCAATTTGCGAATTCTGTTTGGCTGCCCAAAATTCCACTGTGCATTTTTCTCCCTTGGGAATTTATCAAGAAATGGTTGAGATCCTCGTTCTTTTGATGATGGTGAATAGAACTATTTTTTGATAAATAGTTGAGATTCTCGTTCTTTCGATTCTGTTTGGCTGCCGCCACCATTATCGCCCAGGAAAAAAAATTGATGTCGTTAGACTAACTGAATCTTAACCATTTCTTGATAAAATTGCATATAGGCTGTGGGGAAGAGAAGGGAAGAGAAAAATGGTTGTGGGGAAGGGAAGGAGATGGAGAGAAGATGAAGGCGGCGCCGCTCGCCGGCGATAAGATGAAGGAGAGGGAGAGAAGAGGAGGGGGAGAGAGAAGTAGAAGGAAAAAGGGGGAAGGGAATCGGGGAGAGAGAGAAGGGTTCATTTTTTATTTTTTTATTTTATTATTATTTTAATTTAAAATTCAATATTTTGATATTTTTAACGTGCCACGTCAGCACCGTTAAAAAAACTAACGGTTGAAGGACTTAATAGAACTATTTCCGAAACAATAGGGACTTGATTGTTCAATTTTGAAACCTAAGGACCTATTAGAAACGGACTCGAAACAGTAGGGGCCAAAAGGGTATTTTACCCTTTTTATAATTTAGCCAAAGTTTAAGGACCAAAATTAACATTTTGAAAGTTTAAAGACCAAAATAGAACAAATTTGAAAGTTTGGGGACTAAAATGAGATTTAAAAAAAAAAAAAATCTATCCATGTACCCCAATAAATCCCTCGTCCGTTTTTTTTCCTAATTTTTAAGCTCGGCACAATTTTTAGGAAAGAAGCTAACTGCTCCACTCCACTTCTTCATCTTCATCTTCACGCTGTCTCCTCCTCCATTTCATCAGCTCAGTGTCACCGCTGCCTCCCTCCCGTTCATTGCTGCCGTCGCCGTCGTCTTTCTTCTGTTTGTTCAGCCACAACCTCCGCCGATTTTCTACTCCCTTGTTGTTACTGGTATTCTCCCAATCTCCATTATGTCTTTCTGCTCACTTGAAAAACACAAATTAGAACTTGTATAATGAGAGGATAGAGGAGTTGTTTGATGTTTCCTTTTTTAATATTTAATAACAATAGCCGAATAGTAGTAAAAAAAAGGAACAGAAACGGGAGAGATTGTTCTCCAGGGCGCAATTGGTACATATACGACGGAAAGATGGTTTTGAGATACTGAATTCTTGGCAGAGAGAAAAGGATTTGGATTGAAAAAAAACCAAACCAAATCGAACGTGTTGTATTTGTTTGTGAATTGTCCTTCCTTCCATTAGACAATTCAAATTAGGACTTAGTTTGATGGATTTAGTTTGAGGGTACATTATAATAGATGTTGATGAGTTATTGAATTAAAGTTTTTCTATAGGAAGCCAATGAACCGTTTTCTAAAACTTGAAGTTGTCTTTTGAGATTCTCTAATGGATGGTACTTGGAATGAGAAGAGTTCATAGGTTTTTGTGTAATAATAAAAACAGAGAGATACAATAATTAATAGCAAATAGTAAATTGAAAAGCCAGCTTGGTAGGGTTGTGGGGCAACGATCTTGAACCAACCCCACTTCCTCTTTCCCGACTTGCTTTTTGTCCTGATTCCAATACATTCAATGTATGTACTTAAAAGAATTAGGTAAAATAGGCATATGTTTAAAATTTGGAGGAAAAATGGGAGATAAAGTTTCTCCCTATAGCCACTTTTATATATAGTATAGATATAGATGATTTAATTGTTCAATTAGAATCTTTTGGATTATTGATGGTTTGGGTTTTGTTGTATTTGTTTATGCTACTGTGGAATAACTTATACTTTGAAACCTGAAATGTGTGGATTTTTTGGAGAGTAGAGTGTTGGGTGGGACAGAAAGTTTCATTTTTACTTAATATTTGGGTTTTCCTGTTTGTTACTCTGTTTCTGTTTAAGTTGTAAGTGTTCATATTATATTTAGATATGCACGAAAGTCTTGTAAAAAGAAGGATTTTTCATGAAATTCCAGCTTGATGGTGTGTGAAAATTTTCGCTATTTGAAGCGATTGTTCTCATTTAAATGTTGCAAGTAGATTTGATTTATCTATTTAGTTGGTCTGTTGTCGTTGTAGGTGGTGGTGTCGAATATGTTAAAACCAAGCAAAGTTTTTGACAACGTTGTCAATAGATTAGCTTGGTGCTTAACAAACAAAAAGATCATCTTCTCCAAAATTGTCTCCAAGAAGCACTACTTTTTCCCTTCTTTTCTTAGTTTCTCTACTTCACTACCTTCGAAGCTTTCAGTTTTTCAACTGCTGGATAATGTAAACACATGCATTGCTTTTCTACAATCATGTGCTGACCACAAGAATCTCAGCAAAGGAAAACAACTTCATTCCCTTATGATCACCTATGGTTTTTCTCATTCACCTTCATCCATTACTAGCTTAATCAACATGTACACCAAATGTGGTCATATGGAGGAGGCCATTTTGGTTTTCCATGATCCGTGTCATGAGCGTAATGTGTTTGCATATAATGCTTTAATTTCCGGGTTTGTCTCTAATGGACTTAATTCAAATGGGTTTCAGTTTTATAAGCAAATGAGGGTAGAGGGTGTAATGCCTGATAAGTACACTTTTCCATGTGTAGTTAGATCTTGTTGTGAGGTTATGGAGGTGAAGAAGATTCATGGATGTTTGTTTAAAATGGGGTTGGAGTTGGATTTGTTTGTTGGCAGTGCTCTGGTTAATACTTACTTAAAGATTGGCTCAATGGAGGATGCGCAAGAAGTGTTTGAAGAACTCTCAATAAAAGATGTTGTGCTGTGGAATGCAATGATCAATGGTTATGCCCAGATTGGTTGCCTTGATGAGGCATTAGAGGTTTTCAGAAGAATGCATATAGAAGGGATTGCACCTAGTAGGTTTACAATTACTGGCATTTTATCAATTTTTGCTTTAAGGGGAGACTTAGGCAATGGGAGAACAGTTCACGGGATTGTGATGAAAATGGGCTATGATTCAGGAGTTGCGGTTTCAAACGCATTAATTGATATGTATGGGAAATGCAAACATATTGGAGATGCTTTAATGATTTTTGAGATGATAAATGAGAAGGACATATTCTCATGGAATTCAATTATATCAGTTCATGAACAATGTGGTGATCATGATGGTACCTTGAGGCTTTTTGATAAGATGTTAGGTTCTGGGATCCTACCTGATTTGGTAACTGTCACAACCGTACTTCCAGCTTGCTCTCATTTGGCTGCCCTCATGCATGGTAGAGAAATTCATGGATATATGATTGTTAATGGATTGGGAAAGGATGGAGACAATGGAGCTGTAGATGATTTGCTTGTGAATAATGCTGTTATGGATATGTATGCAAAATGTGGAAGTATGAGAAATGCCCACAAGGTTTTTGACCTAATGAGCGACAATGATGTGGCATCATGGAATATCATGATTATGGGTTATGGCATGCATGGATATGGTATGGAGGCATTGGATATGTTTTCTCGAATGTGTGAGGAAAAAATTATGCCCGATGAAGTTACGTTTGTTGGAGTTTTATCGGCATGCAATCATGTGGGCTTTGTGTGTCAAGGGCGTTTGTTTTTAGCCCAAATGGAATCTAAATTTGGTGTTATTCCAACTATTGAGCATTATACATGTGTAATTGATATGCTTGGTCGAGCTGGACATTTGGAGGATGCTTATGAGTTGGCTCAGAAAATGCCTATTCAAGCCAATCCCGTCGTGTGGAGGGCTTTATTGGGTGCATGTCGACTTCATGGGAATGCAGAGCTGGCCGAAGTTGCTGCACGACAAGTAATGCAACTTGAACCAGAACATTGTGGGAGTTATGTATTGATGTCTAATGTTTATGGAGTTGTAGGTCGATATGAAGAGGTGTTGGAGGTAAGAAAAACAATGAAGGAACAAAATGTCAAGAAGACACCTGGTTGTAGTTGGATAGAACTCAAGGATGGGGTGCACGTTTTTCTTACCGGAGATAGGACACATTCAGAATTGAATGCGTTGACTAATCAACTTTGTGATATTGGATTCATTTTAGATGAAGTTTTGAATTTATATTGAGATATGGTAGTATGTGCAATTGCAATAACCTTTTCTTTCATTCAAAAATTGATGAGTGGCATAAAAAAAAAACTAACAATTCACAATACATAGTAAACTCATCAATGTCTGATACAATCATTAATCAACGATTCATAATGTGAATCGTTGATTAATGATTGTATCAGACAAATATCCTTGATTGCCCACCTCCTCTTATTGAGTAATGAGTTAAATGTTGTAATTTCTCTCTTTCTTTGGCTACTTCTACATTTTTGTTCCAAATGCAAGTATTTCTTATATCTTCCCTTCTCTCATTGGGAGCTCTCCATTGCAAAGTTTCTTAGTTGAAGAGCCTAGCTTCAAGGATATGACAACAAAACTGATGATCAAAGGTGGTGCCTTTTTGTGGCTCTTTTCATTCAAGTTCTCTCAACTGTGGCCTTACTCATATTGGTAATCTCTCTCTCTTCTCTATCACTTTTTTTTATCTGTTCTCTTGGAATTGGGAGGAGATTTTATTTTGTATTATGATTTCTATGTGCTAGTGATTGAGATATGTATGCAAAGAGTCCTGCTTAATGTCGATCTCAAAAAGTTTTAGAAGGTATTTCGTTGATCATTGAATTTCTTTGGTAGAAGAATTATTGCGAGCTGACTTCCTCCAATTCACTTTGCTTCCCTGAGTGCAATTGCTCCACTACTAGTCTCTCTCTCTCTTGTTTTGTTTTGCTCATTGTTGATTGATGTGACAACACTTCCATAACTCCGCTAATGAAGGCGATAAACAAATTTGTTTCTTAATTTTAATGTACAATTTCAACCAGGCTAGCATCATAAAATCAAATGCATTAGTTTGGGTGATTGCACTATCATGCTCTAAATCTTTTTTATTATGATTTTGCTACCTTATATTCAAATGATTTTGCTACCCAAAACCTATTTCCTTAGTTCTATTAATGTTAATGACAAGCATATGTATTTAATTTTTTTTGAAGTACTATATTTCACTTGAATATTCTAAATGTTGGGAGATCTTGCTTCAAATGTAAATTTTGGTCTTTTTAAATAAGTTTTGCATCACTTGTATGTATATTGCAAATAAGAATATATATGGTATTAAAGGTTTTTTTTTTTTTTTTTTTTTCCTGCAATTGTAGACTCAAATGTATGATGAGATTCGGCGAGCCTATGAACAACCTAAACTAATTAGGTCTTGAACAAGCATAAAAAGTGCCCAACTGCTATGTCAAAGTAAAGTCAAGAAATTGGAGTTGATGAAGGTATTATCCTACTAGTATTTTGTATTATGTTTAAGAAAAAATATTTGGTAAGAGTCGTGGGATATTGCAGGGTTATTCTTGGGTTTGTTTTATTGCTGTAACTATTCCTTTAACTTAATCGTGTTGCCAAAGTATTATTCTAGACGAATTGACTTGTTTTGATCTTCTGTTTCCTTGAATACTTACAAGGTTATAAAAACATTTTGAACCACCATGGGTTGGCCTAGTGGTTGTCGAGGCCCATGAAAAAAGTAATGGACTTAGAAGGGATATGTTCAAACCATGGTGGTCACTACTCAAAATTTTATATCTTACGAGTCTCCATGGTATTCAAGATTTTGGTCGAGGTGTAGATTGAATATTATAAATGGAAATCAAGATTGTTGTTGAGTGGTTCTAACGAGGATGAGGTATGAATTCTTTCTACTACTTATGTATCTCAATTTCTTTTAAGAAACTGTTACCTACCACAGCTTTGTGTTGTAGGTCCCAATAGATATACTTTTGCAAACTATGTTAATATCCATTTGCTTGCTCAATGAACAGATGCTGTGGAGAAAATGATTGTCTTACTTTGATTATTGTTTTTGAATTTTTTTGATGGCTCTATAAACAGGAATTACATTTGTAACTATCTTTTTAGAAAGATGCTAGCAACATTTTGTTTCTCATTGCACTCTTGCTCCCATCTTCGTCGTCTGTAGCCCTCACACGCTCAAACCTTAATCTAGATCGTTTTTCTATCGCCATTGAGCTCTCTTTTAAAACATTTTGAAGATAAAATGTTTCGAGTTGTCGAGGTCCGAATGGTTGCCAGTTCAGGAAGGTAGTTCACCACTAATTGGTATGTCAAAATCTCTACCATTGTAGAGGATGAGTTTTGTTTATTTGTTTGTGTGTTTTTTTTTTCATCATATTTTTATTGTCCAAAATATGTGCTTAGATATGTATCATTCATCCATCAAAACTCATAACATTGTCC

mRNA sequence

CAGCCATTTTTTCTCTTCTCTTCTCCTCTCTTCCTCCATTGCCGCCGCTCGATCTCCTCATCTTCCGCCATCGCCGATTGCCTCTCCAAGATTTCCTTTGCCTTTCAGAAATGTCGGTGGTGGTGTCGAATATGTTAAAACCAAGCAAAGTTTTTGACAACGTTGTCAATAGATTAGCTTGGTGCTTAACAAACAAAAAGATCATCTTCTCCAAAATTGTCTCCAAGAAGCACTACTTTTTCCCTTCTTTTCTTAGTTTCTCTACTTCACTACCTTCGAAGCTTTCAGTTTTTCAACTGCTGGATAATGTAAACACATGCATTGCTTTTCTACAATCATGTGCTGACCACAAGAATCTCAGCAAAGGAAAACAACTTCATTCCCTTATGATCACCTATGGTTTTTCTCATTCACCTTCATCCATTACTAGCTTAATCAACATGTACACCAAATGTGGTCATATGGAGGAGGCCATTTTGGTTTTCCATGATCCGTGTCATGAGCGTAATGTGTTTGCATATAATGCTTTAATTTCCGGGTTTGTCTCTAATGGACTTAATTCAAATGGGTTTCAGTTTTATAAGCAAATGAGGGTAGAGGGTGTAATGCCTGATAAGTACACTTTTCCATGTGTAGTTAGATCTTGTTGTGAGGTTATGGAGGTGAAGAAGATTCATGGATGTTTGTTTAAAATGGGGTTGGAGTTGGATTTGTTTGTTGGCAGTGCTCTGGTTAATACTTACTTAAAGATTGGCTCAATGGAGGATGCGCAAGAAGTGTTTGAAGAACTCTCAATAAAAGATGTTGTGCTGTGGAATGCAATGATCAATGGTTATGCCCAGATTGGTTGCCTTGATGAGGCATTAGAGGTTTTCAGAAGAATGCATATAGAAGGGATTGCACCTAGTAGGTTTACAATTACTGGCATTTTATCAATTTTTGCTTTAAGGGGAGACTTAGGCAATGGGAGAACAGTTCACGGGATTGTGATGAAAATGGGCTATGATTCAGGAGTTGCGGTTTCAAACGCATTAATTGATATGTATGGGAAATGCAAACATATTGGAGATGCTTTAATGATTTTTGAGATGATAAATGAGAAGGACATATTCTCATGGAATTCAATTATATCAGTTCATGAACAATGTGGTGATCATGATGGTACCTTGAGGCTTTTTGATAAGATGTTAGGTTCTGGGATCCTACCTGATTTGGTAACTGTCACAACCGTACTTCCAGCTTGCTCTCATTTGGCTGCCCTCATGCATGGTAGAGAAATTCATGGATATATGATTGTTAATGGATTGGGAAAGGATGGAGACAATGGAGCTGTAGATGATTTGCTTGTGAATAATGCTGTTATGGATATGTATGCAAAATGTGGAAGTATGAGAAATGCCCACAAGGTTTTTGACCTAATGAGCGACAATGATGTGGCATCATGGAATATCATGATTATGGGTTATGGCATGCATGGATATGGTATGGAGGCATTGGATATGTTTTCTCGAATGTGTGAGGAAAAAATTATGCCCGATGAAGTTACGTTTGTTGGAGTTTTATCGGCATGCAATCATGTGGGCTTTGTGTGTCAAGGGCGTTTGTTTTTAGCCCAAATGGAATCTAAATTTGGTGTTATTCCAACTATTGAGCATTATACATGTGTAATTGATATGCTTGGTCGAGCTGGACATTTGGAGGATGCTTATGAGTTGGCTCAGAAAATGCCTATTCAAGCCAATCCCGTCGTGTGGAGGGCTTTATTGGGTGCATGTCGACTTCATGGGAATGCAGAGCTGGCCGAAGTTGCTGCACGACAAGTAATGCAACTTGAACCAGAACATTGTGGGAGTTATGTATTGATGTCTAATGTTTATGGAGTTGTAGGTCGATATGAAGAGGTGTTGGAGGTAAGAAAAACAATGAAGGAACAAAATGTCAAGAAGACACCTGGTTGTAGTTGGATAGAACTCAAGGATGGGGTGCACGTTTTTCTTACCGGAGATAGGACACATTCAGAATTGAATGCGTTGACTAATCAACTTTGTGATATTGGATTCATTTTAGATGAAGTTTTGAATTTATATTGAGATATGGTAGTATGTGCAATTGCAATAACCTTTTCTTTCATTCAAAAATTGATGAGTGGCATAAAAAAAAAACTAACAATTCACAATACATAGTAAACTCATCAATGTCTGATACAATCATTAATCAACGATTCATAATGTGAATCGTTGATTAATGATTGTATCAGACAAATATCCTTGATTGCCCACCTCCTCTTATTGAGTAATGAGTTAAATGTTGTAATTTCTCTCTTTCTTTGGCTACTTCTACATTTTTGTTCCAAATGCAAGTATTTCTTATATCTTCCCTTCTCTCATTGGGAGCTCTCCATTGCAAAGTTTCTTAGTTGAAGAGCCTAGCTTCAAGGATATGACAACAAAACTGATGATCAAAGGTGGTGCCTTTTTGTGGCTCTTTTCATTCAAGTTCTCTCAACTGTGGCCTTACTCATATTGACTCAAATGTATGATGAGATTCGGCGAGCCTATGAACAACCTAAACTAATTAGGTCTTGAACAAGCATAAAAAGTGCCCAACTGCTATGTCAAAGTAAAGTCAAGAAATTGGAGTTGATGAAGGTATTATCCTACTAGTATTTTGTATTATGTTTAAGAAAAAATATTTGGTAAGAGTCGTGGGATATTGCAGGGTTATTCTTGGGTTTGTTTTATTGCTGTAACTATTCCTTTAACTTAATCGTGTTGCCAAAGTATTATTCTAGACGAATTGACTTGTTTTGATCTTCTGTTTCCTTGAATACTTACAAGGTTATAAAAACATTTTGAACCACCATGGGTTGGCCTAGTGGTTGTCGAGGCCCATGAAAAAAGTAATGGACTTAGAAGGGATATGTTCAAACCATGGTGGTCACTACTCAAAATTTTATATCTTACGAGTCTCCATGGTATTCAAGATTTTGGTCGAGGTGTAGATTGAATATTATAAATGGAAATCAAGATTGTTGTTGAGTGGTTCTAACGAGGATGAGGTATGAATTCTTTCTACTACTTATGTATCTCAATTTCTTTTAAGAAACTGTTACCTACCACAGCTTTGTGTTGTAGGTCCCAATAGATATACTTTTGCAAACTATGTTAATATCCATTTGCTTGCTCAATGAACAGATGCTGTGGAGAAAATGATTGTCTTACTTTGATTATTGTTTTTGAATTTTTTTGATGGCTCTATAAACAGGAATTACATTTGTAACTATCTTTTTAGAAAGATGCTAGCAACATTTTGTTTCTCATTGCACTCTTGCTCCCATCTTCGTCGTCTGTAGCCCTCACACGCTCAAACCTTAATCTAGATCGTTTTTCTATCGCCATTGAGCTCTCTTTTAAAACATTTTGAAGATAAAATGTTTCGAGTTGTCGAGGTCCGAATGGTTGCCAGTTCAGGAAGGTAGTTCACCACTAATTGGTATGTCAAAATCTCTACCATTGTAGAGGATGAGTTTTGTTTATTTGTTTGTGTGTTTTTTTTTTCATCATATTTTTATTGTCCAAAATATGTGCTTAGATATGTATCATTCATCCATCAAAACTCATAACATTGTCC

Coding sequence (CDS)

ATGTCGGTGGTGGTGTCGAATATGTTAAAACCAAGCAAAGTTTTTGACAACGTTGTCAATAGATTAGCTTGGTGCTTAACAAACAAAAAGATCATCTTCTCCAAAATTGTCTCCAAGAAGCACTACTTTTTCCCTTCTTTTCTTAGTTTCTCTACTTCACTACCTTCGAAGCTTTCAGTTTTTCAACTGCTGGATAATGTAAACACATGCATTGCTTTTCTACAATCATGTGCTGACCACAAGAATCTCAGCAAAGGAAAACAACTTCATTCCCTTATGATCACCTATGGTTTTTCTCATTCACCTTCATCCATTACTAGCTTAATCAACATGTACACCAAATGTGGTCATATGGAGGAGGCCATTTTGGTTTTCCATGATCCGTGTCATGAGCGTAATGTGTTTGCATATAATGCTTTAATTTCCGGGTTTGTCTCTAATGGACTTAATTCAAATGGGTTTCAGTTTTATAAGCAAATGAGGGTAGAGGGTGTAATGCCTGATAAGTACACTTTTCCATGTGTAGTTAGATCTTGTTGTGAGGTTATGGAGGTGAAGAAGATTCATGGATGTTTGTTTAAAATGGGGTTGGAGTTGGATTTGTTTGTTGGCAGTGCTCTGGTTAATACTTACTTAAAGATTGGCTCAATGGAGGATGCGCAAGAAGTGTTTGAAGAACTCTCAATAAAAGATGTTGTGCTGTGGAATGCAATGATCAATGGTTATGCCCAGATTGGTTGCCTTGATGAGGCATTAGAGGTTTTCAGAAGAATGCATATAGAAGGGATTGCACCTAGTAGGTTTACAATTACTGGCATTTTATCAATTTTTGCTTTAAGGGGAGACTTAGGCAATGGGAGAACAGTTCACGGGATTGTGATGAAAATGGGCTATGATTCAGGAGTTGCGGTTTCAAACGCATTAATTGATATGTATGGGAAATGCAAACATATTGGAGATGCTTTAATGATTTTTGAGATGATAAATGAGAAGGACATATTCTCATGGAATTCAATTATATCAGTTCATGAACAATGTGGTGATCATGATGGTACCTTGAGGCTTTTTGATAAGATGTTAGGTTCTGGGATCCTACCTGATTTGGTAACTGTCACAACCGTACTTCCAGCTTGCTCTCATTTGGCTGCCCTCATGCATGGTAGAGAAATTCATGGATATATGATTGTTAATGGATTGGGAAAGGATGGAGACAATGGAGCTGTAGATGATTTGCTTGTGAATAATGCTGTTATGGATATGTATGCAAAATGTGGAAGTATGAGAAATGCCCACAAGGTTTTTGACCTAATGAGCGACAATGATGTGGCATCATGGAATATCATGATTATGGGTTATGGCATGCATGGATATGGTATGGAGGCATTGGATATGTTTTCTCGAATGTGTGAGGAAAAAATTATGCCCGATGAAGTTACGTTTGTTGGAGTTTTATCGGCATGCAATCATGTGGGCTTTGTGTGTCAAGGGCGTTTGTTTTTAGCCCAAATGGAATCTAAATTTGGTGTTATTCCAACTATTGAGCATTATACATGTGTAATTGATATGCTTGGTCGAGCTGGACATTTGGAGGATGCTTATGAGTTGGCTCAGAAAATGCCTATTCAAGCCAATCCCGTCGTGTGGAGGGCTTTATTGGGTGCATGTCGACTTCATGGGAATGCAGAGCTGGCCGAAGTTGCTGCACGACAAGTAATGCAACTTGAACCAGAACATTGTGGGAGTTATGTATTGATGTCTAATGTTTATGGAGTTGTAGGTCGATATGAAGAGGTGTTGGAGGTAAGAAAAACAATGAAGGAACAAAATGTCAAGAAGACACCTGGTTGTAGTTGGATAGAACTCAAGGATGGGGTGCACGTTTTTCTTACCGGAGATAGGACACATTCAGAATTGAATGCGTTGACTAATCAACTTTGTGATATTGGATTCATTTTAGATGAAGTTTTGAATTTATATTGA

Protein sequence

MSVVVSNMLKPSKVFDNVVNRLAWCLTNKKIIFSKIVSKKHYFFPSFLSFSTSLPSKLSVFQLLDNVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEAILVFHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEVMEVKKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMINGYAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSGVAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDMYAKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTFVGVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMPIQANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY
Homology
BLAST of Lcy04g005410 vs. ExPASy Swiss-Prot
Match: Q9LUC2 (Pentatricopeptide repeat-containing protein At3g14730 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E31 PE=2 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 5.6e-193
Identity = 328/584 (56.16%), Postives = 425/584 (72.77%), Query Frame = 0

Query: 66  NVNTCIAFLQSCADHKNLSKGKQLHSLMITYGF-SHSPSSITSLINMYTKCGHMEEAILV 125
           NV TCIA LQ CA  K+   G+Q+H  M+  GF   SP + TSL+NMY KCG M  A+LV
Sbjct: 59  NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118

Query: 126 FHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVR--SCCEV 185
           F     ER+VF YNALISGFV NG   +  + Y++MR  G++PDKYTFP +++     E+
Sbjct: 119 FGG--SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMEL 178

Query: 186 MEVKKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIK-DVVLWNAMING 245
            +VKK+HG  FK+G + D +VGS LV +Y K  S+EDAQ+VF+EL  + D VLWNA++NG
Sbjct: 179 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 238

Query: 246 YAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSG 305
           Y+QI   ++AL VF +M  EG+  SR TIT +LS F + GD+ NGR++HG+ +K G  S 
Sbjct: 239 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD 298

Query: 306 VAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLG 365
           + VSNALIDMYGK K + +A  IFE ++E+D+F+WNS++ VH+ CGDHDGTL LF++ML 
Sbjct: 299 IVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLC 358

Query: 366 SGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDMY 425
           SGI PD+VT+TTVLP C  LA+L  GREIHGYMIV+GL     N    +  ++N++MDMY
Sbjct: 359 SGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGL----LNRKSSNEFIHNSLMDMY 418

Query: 426 AKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTFV 485
            KCG +R+A  VFD M   D ASWNIMI GYG+   G  ALDMFS MC   + PDE+TFV
Sbjct: 419 VKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFV 478

Query: 486 GVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMPI 545
           G+L AC+H GF+ +GR FLAQME+ + ++PT +HY CVIDMLGRA  LE+AYELA   PI
Sbjct: 479 GLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPI 538

Query: 546 QANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLEV 605
             NPVVWR++L +CRLHGN +LA VA +++ +LEPEHCG YVLMSNVY   G+YEEVL+V
Sbjct: 539 CDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDV 598

Query: 606 RKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQL 646
           R  M++QNVKKTPGCSWI LK+GVH F TG++TH E  ++ + L
Sbjct: 599 RDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWL 636

BLAST of Lcy04g005410 vs. ExPASy Swiss-Prot
Match: Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 5.5e-116
Identity = 226/615 (36.75%), Postives = 349/615 (56.75%), Query Frame = 0

Query: 56  SKLSVFQLLDNVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKC 115
           S + + Q+  N  T    L  CA    +  G QLH L++  G     S   SL++MY+KC
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287

Query: 116 GHMEEAILVFHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCV 175
           G  ++A  +F       +   +N +ISG+V +GL      F+ +M   GV+PD  TF  +
Sbjct: 288 GRFDDASKLFR-MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 347

Query: 176 VRSCCEVMEV---KKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDV 235
           + S  +   +   K+IH  + +  + LD+F+ SAL++ Y K   +  AQ +F + +  DV
Sbjct: 348 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 407

Query: 236 VLWNAMINGYAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGI 295
           V++ AMI+GY   G   ++LE+FR +    I+P+  T+  IL +  +   L  GR +HG 
Sbjct: 408 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 467

Query: 296 VMKMGYDSGVAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGT 355
           ++K G+D+   +  A+IDMY KC  +  A  IFE ++++DI SWNS+I+   Q  +    
Sbjct: 468 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 527

Query: 356 LRLFDKMLGSGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLL 415
           + +F +M  SGI  D V+++  L AC++L +   G+ IHG+MI + L          D+ 
Sbjct: 528 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSL--------ASDVY 587

Query: 416 VNNAVMDMYAKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEK 475
             + ++DMYAKCG+++ A  VF  M + ++ SWN +I   G HG   ++L +F  M E+ 
Sbjct: 588 SESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 647

Query: 476 -IMPDEVTFVGVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLED 535
            I PD++TF+ ++S+C HVG V +G  F   M   +G+ P  EHY CV+D+ GRAG L +
Sbjct: 648 GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 707

Query: 536 AYELAQKMPIQANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGV 595
           AYE  + MP   +  VW  LLGACRLH N ELAEVA+ ++M L+P + G YVL+SN +  
Sbjct: 708 AYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHAN 767

Query: 596 VGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSE-------LNALTNQ 655
              +E V +VR  MKE+ V+K PG SWIE+    H+F++GD  H E       LN+L  +
Sbjct: 768 AREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGE 827

Query: 656 LCDIGFILDEVLNLY 660
           L   G+I    L L+
Sbjct: 828 LRLEGYIPQPYLPLH 833

BLAST of Lcy04g005410 vs. ExPASy Swiss-Prot
Match: Q9M9E2 (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.6e-115
Identity = 212/587 (36.12%), Postives = 343/587 (58.43%), Query Frame = 0

Query: 66  NVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEAILVF 125
           +V T    L++C    +L++GK++H  ++ YG+      + +LI MY KCG ++ A L+F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254

Query: 126 HDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEVMEV 185
            D    R++ ++NA+ISG+  NG+   G + +  MR   V PD  T   V+ S CE++  
Sbjct: 255 -DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI-SACELLGD 314

Query: 186 KK----IHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMING 245
           ++    IH  +   G  +D+ V ++L   YL  GS  +A+++F  +  KD+V W  MI+G
Sbjct: 315 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 374

Query: 246 YAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSG 305
           Y      D+A++ +R M  + + P   T+  +LS  A  GDL  G  +H + +K    S 
Sbjct: 375 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 434

Query: 306 VAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIIS---VHEQCGDHDGTLRLFDK 365
           V V+N LI+MY KCK I  AL IF  I  K++ SW SII+   ++ +C +      +F +
Sbjct: 435 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFE----ALIFLR 494

Query: 366 MLGSGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVM 425
            +   + P+ +T+T  L AC+ + ALM G+EIH +++  G+G       +DD L  NA++
Sbjct: 495 QMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVG-------LDDFL-PNALL 554

Query: 426 DMYAKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEV 485
           DMY +CG M  A   F+     DV SWNI++ GY   G G   +++F RM + ++ PDE+
Sbjct: 555 DMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEI 614

Query: 486 TFVGVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQK 545
           TF+ +L  C+    V QG ++ ++ME  +GV P ++HY CV+D+LGRAG L++A++  QK
Sbjct: 615 TFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQK 674

Query: 546 MPIQANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEV 605
           MP+  +P VW ALL ACR+H   +L E++A+ + +L+ +  G Y+L+ N+Y   G++ EV
Sbjct: 675 MPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREV 734

Query: 606 LEVRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQL 646
            +VR+ MKE  +    GCSW+E+K  VH FL+ D+ H +   +   L
Sbjct: 735 AKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVL 765

BLAST of Lcy04g005410 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.0e-114
Identity = 216/620 (34.84%), Postives = 354/620 (57.10%), Query Frame = 0

Query: 81  KNLSKGKQLHSLMI-TYGFSHSPSSITSLINMYTKCGHMEEAILVFHDPCHERNVFAYNA 140
           K+ S+ KQLH+  I T   SH+ +SI  +I++YT    + EA+L+F        V A+ +
Sbjct: 19  KSKSQAKQLHAQFIRTQSLSHTSASI--VISIYTNLKLLHEALLLF-KTLKSPPVLAWKS 78

Query: 141 LISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEVMEVK---KIHGCLFKMG 200
           +I  F    L S     + +MR  G  PD   FP V++SC  +M+++    +HG + ++G
Sbjct: 79  VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 138

Query: 201 LELDLFVGSALVNTYLKIGSM------------------------------------EDA 260
           ++ DL+ G+AL+N Y K+  M                                    +  
Sbjct: 139 MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV 198

Query: 261 QEVFEELSIKDVVLWNAMINGYAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALR 320
           + VFE +  KDVV +N +I GYAQ G  ++AL + R M    + P  FT++ +L IF+  
Sbjct: 199 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 258

Query: 321 GDLGNGRTVHGIVMKMGYDSGVAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSII 380
            D+  G+ +HG V++ G DS V + ++L+DMY K   I D+  +F  +  +D  SWNS++
Sbjct: 259 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 318

Query: 381 SVHEQCGDHDGTLRLFDKMLGSGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLG 440
           + + Q G ++  LRLF +M+ + + P  V  ++V+PAC+HLA L  G+++HGY++  G G
Sbjct: 319 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 378

Query: 441 KDGDNGAVDDLLVNNAVMDMYAKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGME 500
                    ++ + +A++DMY+KCG+++ A K+FD M+  D  SW  +IMG+ +HG+G E
Sbjct: 379 --------SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHE 438

Query: 501 ALDMFSRMCEEKIMPDEVTFVGVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVI 560
           A+ +F  M  + + P++V FV VL+AC+HVG V +   +   M   +G+   +EHY  V 
Sbjct: 439 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 498

Query: 561 DMLGRAGHLEDAYELAQKMPIQANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCG 620
           D+LGRAG LE+AY    KM ++    VW  LL +C +H N ELAE  A ++  ++ E+ G
Sbjct: 499 DLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMG 558

Query: 621 SYVLMSNVYGVVGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSE--- 654
           +YVLM N+Y   GR++E+ ++R  M+++ ++K P CSWIE+K+  H F++GDR+H     
Sbjct: 559 AYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDK 618

BLAST of Lcy04g005410 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.0e-113
Identity = 230/637 (36.11%), Postives = 358/637 (56.20%), Query Frame = 0

Query: 7   NMLKPSKVFDNV--VNRLAWCLTNKKIIFSKIVSKKHYFFPSFLSFSTSLPSKLSVFQLL 66
           ++ + S+VFD V     L W +   ++  S   S     F   +S    + S        
Sbjct: 144 DLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDS-------- 203

Query: 67  DNVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEAILV 126
               +C++  +S +  +++  G+QLH  ++  GF    S   SL+  Y K   ++ A  V
Sbjct: 204 -YTFSCVS--KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKV 263

Query: 127 FHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEVME 186
           F D   ER+V ++N++I+G+VSNGL   G   + QM V G+  D  T   V   C +   
Sbjct: 264 F-DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRL 323

Query: 187 V---KKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMING 246
           +   + +H    K     +    + L++ Y K G ++ A+ VF E+S + VV + +MI G
Sbjct: 324 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 383

Query: 247 YAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSG 306
           YA+ G   EA+++F  M  EGI+P  +T+T +L+  A    L  G+ VH  + +      
Sbjct: 384 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD 443

Query: 307 VAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKML- 366
           + VSNAL+DMY KC  + +A ++F  +  KDI SWN+II  + +    +  L LF+ +L 
Sbjct: 444 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 503

Query: 367 GSGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDM 426
                PD  TV  VLPAC+ L+A   GREIHGY++         NG   D  V N+++DM
Sbjct: 504 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIM--------RNGYFSDRHVANSLVDM 563

Query: 427 YAKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTF 486
           YAKCG++  AH +FD ++  D+ SW +MI GYGMHG+G EA+ +F++M +  I  DE++F
Sbjct: 564 YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF 623

Query: 487 VGVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMP 546
           V +L AC+H G V +G  F   M  +  + PT+EHY C++DML R G L  AY   + MP
Sbjct: 624 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP 683

Query: 547 IQANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLE 606
           I  +  +W ALL  CR+H + +LAE  A +V +LEPE+ G YVLM+N+Y    ++E+V  
Sbjct: 684 IPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKR 743

Query: 607 VRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSE 638
           +RK + ++ ++K PGCSWIE+K  V++F+ GD ++ E
Sbjct: 744 LRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPE 760

BLAST of Lcy04g005410 vs. ExPASy TrEMBL
Match: A0A6J1EGD0 (pentatricopeptide repeat-containing protein At3g14730 OS=Cucurbita moschata OX=3662 GN=LOC111432309 PE=4 SV=1)

HSP 1 Score: 1204.1 bits (3114), Expect = 0.0e+00
Identity = 581/654 (88.84%), Postives = 618/654 (94.50%), Query Frame = 0

Query: 7   NMLKPSKVFDNVVNRLAWCLTNKKIIFSKIVSKKHYFF-PSFLSFSTSLPSKLSVFQLLD 66
           NMLKPSK FDNVV+RLAWC+TNKK I +KIVSKKHYF   SFLS STSLPSK S F+LLD
Sbjct: 3   NMLKPSKFFDNVVDRLAWCITNKK-ISTKIVSKKHYFVSSSFLSLSTSLPSKPSDFRLLD 62

Query: 67  NVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEAILVF 126
           NV TCIAFLQSCA+ KNL+KGKQLHS+MITYGFSHSPSSITSLINMY+KCG MEEA+LVF
Sbjct: 63  NVTTCIAFLQSCAESKNLNKGKQLHSVMITYGFSHSPSSITSLINMYSKCGRMEEAVLVF 122

Query: 127 HDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEVMEV 186
           HDPC+E NVFAYNA+ISGFV+NGL S GFQFYKQMR+EGVMPDKYTFPCVVRSCCEVMEV
Sbjct: 123 HDPCYEPNVFAYNAIISGFVANGLASIGFQFYKQMRLEGVMPDKYTFPCVVRSCCEVMEV 182

Query: 187 KKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMINGYAQI 246
           KKIHGCLFKMGLELDLFVGSALVNTYLK+GSMEDAQEVFEEL I+DVVLWNAMINGYAQI
Sbjct: 183 KKIHGCLFKMGLELDLFVGSALVNTYLKLGSMEDAQEVFEELPIRDVVLWNAMINGYAQI 242

Query: 247 GCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSGVAVS 306
           GCLDEALE+FRRMHIEG++PSRFTITGILSIFAL+G L NGRTVHGIVMKMGYDSGVAVS
Sbjct: 243 GCLDEALEIFRRMHIEGVSPSRFTITGILSIFALKGHLDNGRTVHGIVMKMGYDSGVAVS 302

Query: 307 NALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGIL 366
           NALIDMYGKCKHIGDALM+FE +NEKDIFSWNSIISVHEQCGDHDG LRLFDKMLGSG L
Sbjct: 303 NALIDMYGKCKHIGDALMVFETMNEKDIFSWNSIISVHEQCGDHDGALRLFDKMLGSGFL 362

Query: 367 PDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDMYAKCG 426
           PDLVTVTT+LPACSHLAALMHGREIHGYMIVNGLG+DGDNG +DDLLVNNAVMDMYAKCG
Sbjct: 363 PDLVTVTTILPACSHLAALMHGREIHGYMIVNGLGRDGDNGVIDDLLVNNAVMDMYAKCG 422

Query: 427 SMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTFVGVLS 486
           SM+NA KVF+ M++ DVASWNIMIMGYGMHGYGM+ALDM S MCE KI PDEVTFVGVLS
Sbjct: 423 SMKNAQKVFNSMTNKDVASWNIMIMGYGMHGYGMDALDMISHMCEAKIKPDEVTFVGVLS 482

Query: 487 ACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMPIQANP 546
           ACNH GFVCQGR FLAQME  FGVIPTIEHYTCVIDMLGRAGHLEDAY+LAQ MPIQANP
Sbjct: 483 ACNHAGFVCQGRWFLAQMEHDFGVIPTIEHYTCVIDMLGRAGHLEDAYDLAQTMPIQANP 542

Query: 547 VVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLEVRKTM 606
           VVWRALLGACRLHGNAELAE+AA++VMQL+PEHCGSYVLMSNVYGVVGRYEEVLEVR TM
Sbjct: 543 VVWRALLGACRLHGNAELAEIAAQKVMQLDPEHCGSYVLMSNVYGVVGRYEEVLEVRNTM 602

Query: 607 KEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 660
           KEQ+V+KTPGCSWIELKDGVHVFLTGDRTH ELNALT+QLCDIGFILDEVLNLY
Sbjct: 603 KEQHVRKTPGCSWIELKDGVHVFLTGDRTHLELNALTSQLCDIGFILDEVLNLY 655

BLAST of Lcy04g005410 vs. ExPASy TrEMBL
Match: A0A6J1DFN8 (pentatricopeptide repeat-containing protein At3g14730-like OS=Momordica charantia OX=3673 GN=LOC111020018 PE=4 SV=1)

HSP 1 Score: 1203.7 bits (3113), Expect = 0.0e+00
Identity = 589/656 (89.79%), Postives = 618/656 (94.21%), Query Frame = 0

Query: 4   VVSNMLKPSKVFDNVVNRLAWCLTNKKIIFSKIVSKKHYFFPSFLSFSTSLPSKLSVFQL 63
           +VSNMLKP KVFD+VV+RLAWCLT KKI FSKIVSKKHY F SFLSFSTS PSK SVFQL
Sbjct: 1   MVSNMLKPHKVFDDVVDRLAWCLTTKKINFSKIVSKKHYLFSSFLSFSTSPPSKCSVFQL 60

Query: 64  LDNVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEAIL 123
           L+NV T I+FLQSCADHKNL++GKQLHSLMITYGFSHSPSSITSLINMY+KCG MEEAIL
Sbjct: 61  LENVTTSISFLQSCADHKNLNRGKQLHSLMITYGFSHSPSSITSLINMYSKCGQMEEAIL 120

Query: 124 VFHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEVM 183
           VFHDPCHERNVFAYNALISGFV+NGL SNG QFYKQMR+EGVMPDKYTFPCVVRSCCE M
Sbjct: 121 VFHDPCHERNVFAYNALISGFVANGLASNGLQFYKQMRLEGVMPDKYTFPCVVRSCCEAM 180

Query: 184 EVKKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMINGYA 243
           EVKKIHGCLFKMGLELD+FVGSALVNTYLKIG ME+AQ+VFEELSI+DVVLWNA+INGYA
Sbjct: 181 EVKKIHGCLFKMGLELDMFVGSALVNTYLKIGLMENAQKVFEELSIRDVVLWNALINGYA 240

Query: 244 QIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSGVA 303
           QIGCLDEALEVFRRM IEGI PSRFT+TGILSIFALRGDL NGRTVH IV KMGY+ GVA
Sbjct: 241 QIGCLDEALEVFRRMSIEGILPSRFTVTGILSIFALRGDLNNGRTVHAIVTKMGYNLGVA 300

Query: 304 VSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSG 363
           V NALIDMYGKCKHI DALMIF+MI+EKDIFSWNSIISVHEQ GDHDGTLRLFDKMLGSG
Sbjct: 301 VLNALIDMYGKCKHIRDALMIFKMIDEKDIFSWNSIISVHEQYGDHDGTLRLFDKMLGSG 360

Query: 364 ILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDMYAK 423
           ILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNG GKD   G VDDLLVNNAVMDMYAK
Sbjct: 361 ILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGFGKD---GGVDDLLVNNAVMDMYAK 420

Query: 424 CGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTFVGV 483
           CGSM+NA  VFDLMS+ DVASWNI+IMGYGMHGYGMEALD+FS MCE +I PDEVTFVGV
Sbjct: 421 CGSMKNALMVFDLMSNKDVASWNIVIMGYGMHGYGMEALDIFSCMCEARIKPDEVTFVGV 480

Query: 484 LSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMPIQA 543
           LSACNH GFV QGRLFLAQMES+FGVIPTIEHYTCVIDMLGRAGHL+DAYELAQKMPIQA
Sbjct: 481 LSACNHAGFVSQGRLFLAQMESEFGVIPTIEHYTCVIDMLGRAGHLKDAYELAQKMPIQA 540

Query: 544 NPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLEVRK 603
           NP+VWRALLGACRLHGNAELAEVAAR+VMQLEPEHCGSYVLMSNVYGVVGRY EVLEVRK
Sbjct: 541 NPIVWRALLGACRLHGNAELAEVAARKVMQLEPEHCGSYVLMSNVYGVVGRYGEVLEVRK 600

Query: 604 TMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 660
           TMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNAL NQLCDIG+ILDEVLNLY
Sbjct: 601 TMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALANQLCDIGYILDEVLNLY 653

BLAST of Lcy04g005410 vs. ExPASy TrEMBL
Match: A0A6J1HNR1 (pentatricopeptide repeat-containing protein At3g14730-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465952 PE=4 SV=1)

HSP 1 Score: 1202.2 bits (3109), Expect = 0.0e+00
Identity = 580/658 (88.15%), Postives = 620/658 (94.22%), Query Frame = 0

Query: 3   VVVSNMLKPSKVFDNVVNRLAWCLTNKKIIFSKIVSKKHYFF-PSFLSFSTSLPSKLSVF 62
           V + NMLKPSK FDNVV+RLAWC+TNKK I +KIVSKKHYF   SFLS STS PSK S F
Sbjct: 5   VTMLNMLKPSKFFDNVVDRLAWCITNKK-ISTKIVSKKHYFVSSSFLSLSTSPPSKPSDF 64

Query: 63  QLLDNVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEA 122
           +LL+NV TCIAFLQSCA+ KNL+KGKQLHS+MITYGFSHSPSSITSLINMY+KCG MEEA
Sbjct: 65  RLLNNVTTCIAFLQSCAESKNLNKGKQLHSVMITYGFSHSPSSITSLINMYSKCGRMEEA 124

Query: 123 ILVFHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCE 182
           +LVFHDPC+E NVFAYNA+ISGFV+NGL S GFQFYKQMR+EGVMPDKYTFPCVVRSCCE
Sbjct: 125 VLVFHDPCYEPNVFAYNAIISGFVANGLASIGFQFYKQMRLEGVMPDKYTFPCVVRSCCE 184

Query: 183 VMEVKKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMING 242
           VMEVKKIHGCLFKMGLELDLFVGSALVNTYLK+GSMEDAQEVFEEL I+DVVLWNAMING
Sbjct: 185 VMEVKKIHGCLFKMGLELDLFVGSALVNTYLKLGSMEDAQEVFEELPIRDVVLWNAMING 244

Query: 243 YAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSG 302
           YAQIGCLDEALE+F+RMHIEG++PSRFTITGILSIFAL+G L NGRTVHGIVMKMGYDSG
Sbjct: 245 YAQIGCLDEALEIFKRMHIEGVSPSRFTITGILSIFALKGHLDNGRTVHGIVMKMGYDSG 304

Query: 303 VAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLG 362
           VAVSNALIDMYGKCKHIGDALM+FE +NEKDIFSWNSIISVHEQCGDHDG LRLFDKMLG
Sbjct: 305 VAVSNALIDMYGKCKHIGDALMVFETMNEKDIFSWNSIISVHEQCGDHDGALRLFDKMLG 364

Query: 363 SGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDMY 422
           SG LPDLVTVTT+LPACSHLAALMHGREIHGYMIVNGLG+DGDNG +DDLLVNNAVMDMY
Sbjct: 365 SGFLPDLVTVTTILPACSHLAALMHGREIHGYMIVNGLGRDGDNGVIDDLLVNNAVMDMY 424

Query: 423 AKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTFV 482
           AKCGSM NA KVF+ M++ DVASWNIMIMGYGMHGYGM+ALDMFS MCE KI PDEVTFV
Sbjct: 425 AKCGSMNNAQKVFNSMTNKDVASWNIMIMGYGMHGYGMDALDMFSHMCEAKIKPDEVTFV 484

Query: 483 GVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMPI 542
           GVLSACNH GFVCQGR+FLAQME  FGVIPTIEHYTCVIDMLGRAGHLEDAY+LAQ MPI
Sbjct: 485 GVLSACNHAGFVCQGRMFLAQMEHDFGVIPTIEHYTCVIDMLGRAGHLEDAYDLAQTMPI 544

Query: 543 QANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLEV 602
           QANPVVWRALLGACRLHGNAELAE+AA++VMQL+PEHCGSYVLMSNVYGVVGRYEEVLEV
Sbjct: 545 QANPVVWRALLGACRLHGNAELAEIAAQKVMQLDPEHCGSYVLMSNVYGVVGRYEEVLEV 604

Query: 603 RKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 660
           R TMKEQ+V+KTPGCSWIELKDGVHVFLTGDRTH ELNALT+QLCDIGFILDEVLNLY
Sbjct: 605 RNTMKEQHVRKTPGCSWIELKDGVHVFLTGDRTHLELNALTSQLCDIGFILDEVLNLY 661

BLAST of Lcy04g005410 vs. ExPASy TrEMBL
Match: A0A6J1HME0 (pentatricopeptide repeat-containing protein At3g14730-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465952 PE=4 SV=1)

HSP 1 Score: 1201.4 bits (3107), Expect = 0.0e+00
Identity = 579/654 (88.53%), Postives = 618/654 (94.50%), Query Frame = 0

Query: 7   NMLKPSKVFDNVVNRLAWCLTNKKIIFSKIVSKKHYFF-PSFLSFSTSLPSKLSVFQLLD 66
           NMLKPSK FDNVV+RLAWC+TNKK I +KIVSKKHYF   SFLS STS PSK S F+LL+
Sbjct: 3   NMLKPSKFFDNVVDRLAWCITNKK-ISTKIVSKKHYFVSSSFLSLSTSPPSKPSDFRLLN 62

Query: 67  NVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEAILVF 126
           NV TCIAFLQSCA+ KNL+KGKQLHS+MITYGFSHSPSSITSLINMY+KCG MEEA+LVF
Sbjct: 63  NVTTCIAFLQSCAESKNLNKGKQLHSVMITYGFSHSPSSITSLINMYSKCGRMEEAVLVF 122

Query: 127 HDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEVMEV 186
           HDPC+E NVFAYNA+ISGFV+NGL S GFQFYKQMR+EGVMPDKYTFPCVVRSCCEVMEV
Sbjct: 123 HDPCYEPNVFAYNAIISGFVANGLASIGFQFYKQMRLEGVMPDKYTFPCVVRSCCEVMEV 182

Query: 187 KKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMINGYAQI 246
           KKIHGCLFKMGLELDLFVGSALVNTYLK+GSMEDAQEVFEEL I+DVVLWNAMINGYAQI
Sbjct: 183 KKIHGCLFKMGLELDLFVGSALVNTYLKLGSMEDAQEVFEELPIRDVVLWNAMINGYAQI 242

Query: 247 GCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSGVAVS 306
           GCLDEALE+F+RMHIEG++PSRFTITGILSIFAL+G L NGRTVHGIVMKMGYDSGVAVS
Sbjct: 243 GCLDEALEIFKRMHIEGVSPSRFTITGILSIFALKGHLDNGRTVHGIVMKMGYDSGVAVS 302

Query: 307 NALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGIL 366
           NALIDMYGKCKHIGDALM+FE +NEKDIFSWNSIISVHEQCGDHDG LRLFDKMLGSG L
Sbjct: 303 NALIDMYGKCKHIGDALMVFETMNEKDIFSWNSIISVHEQCGDHDGALRLFDKMLGSGFL 362

Query: 367 PDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDMYAKCG 426
           PDLVTVTT+LPACSHLAALMHGREIHGYMIVNGLG+DGDNG +DDLLVNNAVMDMYAKCG
Sbjct: 363 PDLVTVTTILPACSHLAALMHGREIHGYMIVNGLGRDGDNGVIDDLLVNNAVMDMYAKCG 422

Query: 427 SMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTFVGVLS 486
           SM NA KVF+ M++ DVASWNIMIMGYGMHGYGM+ALDMFS MCE KI PDEVTFVGVLS
Sbjct: 423 SMNNAQKVFNSMTNKDVASWNIMIMGYGMHGYGMDALDMFSHMCEAKIKPDEVTFVGVLS 482

Query: 487 ACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMPIQANP 546
           ACNH GFVCQGR+FLAQME  FGVIPTIEHYTCVIDMLGRAGHLEDAY+LAQ MPIQANP
Sbjct: 483 ACNHAGFVCQGRMFLAQMEHDFGVIPTIEHYTCVIDMLGRAGHLEDAYDLAQTMPIQANP 542

Query: 547 VVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLEVRKTM 606
           VVWRALLGACRLHGNAELAE+AA++VMQL+PEHCGSYVLMSNVYGVVGRYEEVLEVR TM
Sbjct: 543 VVWRALLGACRLHGNAELAEIAAQKVMQLDPEHCGSYVLMSNVYGVVGRYEEVLEVRNTM 602

Query: 607 KEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 660
           KEQ+V+KTPGCSWIELKDGVHVFLTGDRTH ELNALT+QLCDIGFILDEVLNLY
Sbjct: 603 KEQHVRKTPGCSWIELKDGVHVFLTGDRTHLELNALTSQLCDIGFILDEVLNLY 655

BLAST of Lcy04g005410 vs. ExPASy TrEMBL
Match: A0A1S4E0R7 (pentatricopeptide repeat-containing protein At3g14730-like OS=Cucumis melo OX=3656 GN=LOC103495881 PE=4 SV=1)

HSP 1 Score: 1184.1 bits (3062), Expect = 0.0e+00
Identity = 572/657 (87.06%), Postives = 611/657 (93.00%), Query Frame = 0

Query: 4   VVSNMLKPSKVFDNVVNRLAWCLTNKKIIFSKIVSKKHYFF-PSFLSFSTSLPSKLSVFQ 63
           ++ N+LKPSKVFDNV++ LAWCLTN+K IFSKIVSKKHYFF  SFLSFSTS  SKLS  Q
Sbjct: 1   MMPNVLKPSKVFDNVLDSLAWCLTNRKFIFSKIVSKKHYFFSSSFLSFSTSPLSKLSAIQ 60

Query: 64  LLDNVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEAI 123
           +LDNV  CIAFLQSCADHKNL+KGKQ HSLMITYGFS SP SITSLINMY+KCG M EAI
Sbjct: 61  MLDNVTKCIAFLQSCADHKNLNKGKQFHSLMITYGFSLSPPSITSLINMYSKCGQMGEAI 120

Query: 124 LVFHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEV 183
           LVF+DPCHERNVFAYNA+ISGFV+NGL S GFQFY++MR+EGVMPDKYTFPCVVR+CCEV
Sbjct: 121 LVFYDPCHERNVFAYNAIISGFVANGLASKGFQFYEKMRLEGVMPDKYTFPCVVRTCCEV 180

Query: 184 MEVKKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMINGY 243
            EVKKIHGC  KMGLELD+FVGSALVNTYLK GSMEDAQ+VF EL ++DVVLWNAMINGY
Sbjct: 181 KEVKKIHGCSLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELPMRDVVLWNAMINGY 240

Query: 244 AQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSGV 303
           A+IGCLDEALEVFRRMH+EGIAP RFTITGILSIFA RGDL NG+TVHGIV+KMGYDSGV
Sbjct: 241 AKIGCLDEALEVFRRMHVEGIAPGRFTITGILSIFASRGDLDNGKTVHGIVVKMGYDSGV 300

Query: 304 AVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGS 363
           AVSNALIDMYGKCKHIGDAL+IFEMINEKDIFSWNSIISVHEQCGDH GTLRLFDKMLGS
Sbjct: 301 AVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHHGTLRLFDKMLGS 360

Query: 364 GILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDMYA 423
           GILPDLVT+TTVLPACSHLAALM GREIHGYMI+NG GKD +NGA+DDL V+NAVMDMYA
Sbjct: 361 GILPDLVTITTVLPACSHLAALMRGREIHGYMIINGFGKDDENGAIDDLHVSNAVMDMYA 420

Query: 424 KCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTFVG 483
           KCGSM NA K+FD MS+ DVASWNIMIMGYGMHGY +EALDMFSRMCE +  PDEVT VG
Sbjct: 421 KCGSMNNALKIFDSMSNKDVASWNIMIMGYGMHGYALEALDMFSRMCEAEFKPDEVTLVG 480

Query: 484 VLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMPIQ 543
           VLSACNH GFV QGRLF AQMES FGVIPTIEHYTCVIDMLGRAGHLEDAYE+AQKMPIQ
Sbjct: 481 VLSACNHAGFVSQGRLFFAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEVAQKMPIQ 540

Query: 544 ANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLEVR 603
           ANPVVWRALLGACRLHGNAELAEVAARQV+QLEPEHCGSYVLMSNVYGV+GRYEEVLEVR
Sbjct: 541 ANPVVWRALLGACRLHGNAELAEVAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVR 600

Query: 604 KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 660
           KTMKEQNVKKTPGCSWIELKDG+HVF TGDRTHSELNALTNQLCDIGF+LDEVLNLY
Sbjct: 601 KTMKEQNVKKTPGCSWIELKDGMHVFRTGDRTHSELNALTNQLCDIGFLLDEVLNLY 657

BLAST of Lcy04g005410 vs. NCBI nr
Match: XP_038881250.1 (pentatricopeptide repeat-containing protein At3g14730-like [Benincasa hispida])

HSP 1 Score: 1217.2 bits (3148), Expect = 0.0e+00
Identity = 593/657 (90.26%), Postives = 624/657 (94.98%), Query Frame = 0

Query: 4   VVSNMLKPSKVFDNVVNRLAWCLTNKKIIFSKIVSKKHYFFP-SFLSFSTSLPSKLSVFQ 63
           ++SN+LKPSKVFD+V+N LAW LTN+KIIF+KIVS KHYFFP SFLSFSTS PSKLSVFQ
Sbjct: 1   MISNVLKPSKVFDDVLNSLAWGLTNRKIIFAKIVS-KHYFFPSSFLSFSTSRPSKLSVFQ 60

Query: 64  LLDNVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEAI 123
           LLDNV TCIAFLQSCADHKNL+KGKQLHSLMITYGFS SP SITSLINMY+KCG M EAI
Sbjct: 61  LLDNVTTCIAFLQSCADHKNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMREAI 120

Query: 124 LVFHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEV 183
           LVFHDPCHERNVFAYNA+ISGFV+NGL S GFQFY+QMR+EGVMPDKYTFPCVVR+CCEV
Sbjct: 121 LVFHDPCHERNVFAYNAIISGFVANGLASKGFQFYEQMRLEGVMPDKYTFPCVVRTCCEV 180

Query: 184 MEVKKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMINGY 243
           MEVKKIHGCLFKMGLELD+FVGSALVNTYLKIGSME+AQ+VFEE+SI+DVVLWNAMINGY
Sbjct: 181 MEVKKIHGCLFKMGLELDVFVGSALVNTYLKIGSMENAQKVFEEMSIRDVVLWNAMINGY 240

Query: 244 AQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSGV 303
           AQIGCLDEALEVFRRMHIEGIAPSRFTITGIL IFA RGDL NG+TVHGIVMKMGYDSGV
Sbjct: 241 AQIGCLDEALEVFRRMHIEGIAPSRFTITGILPIFASRGDLDNGQTVHGIVMKMGYDSGV 300

Query: 304 AVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGS 363
           AVSNALIDMYGKCKHI DAL+IFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGS
Sbjct: 301 AVSNALIDMYGKCKHIRDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGS 360

Query: 364 GILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDMYA 423
            ILPDLVT+TTVLPACSHLAA MHGREIHGYMIVNGLGKD +NG VDDLLVNNAVMDMYA
Sbjct: 361 EILPDLVTITTVLPACSHLAAFMHGREIHGYMIVNGLGKDDENGVVDDLLVNNAVMDMYA 420

Query: 424 KCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTFVG 483
           KCGSM NA KVFD MS+ DVASWNIMIMGYGMHGYGM+ALDMFSRMCE    PDEVT VG
Sbjct: 421 KCGSMYNALKVFDQMSNKDVASWNIMIMGYGMHGYGMKALDMFSRMCEVGFKPDEVTLVG 480

Query: 484 VLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMPIQ 543
           VLSACNH GFV QGRL LAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAY++ QKMPIQ
Sbjct: 481 VLSACNHTGFVSQGRLLLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYDITQKMPIQ 540

Query: 544 ANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLEVR 603
           ANPVVWRALLGACRLHGNAELAE+AARQVMQLEPEHCGSYVLMSNVYGV+GR+EEVLEVR
Sbjct: 541 ANPVVWRALLGACRLHGNAELAEIAARQVMQLEPEHCGSYVLMSNVYGVIGRHEEVLEVR 600

Query: 604 KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 660
           KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQ+CDIGFILDEVLNLY
Sbjct: 601 KTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQMCDIGFILDEVLNLY 656

BLAST of Lcy04g005410 vs. NCBI nr
Match: KAG6595676.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1207.2 bits (3122), Expect = 0.0e+00
Identity = 583/658 (88.60%), Postives = 621/658 (94.38%), Query Frame = 0

Query: 3   VVVSNMLKPSKVFDNVVNRLAWCLTNKKIIFSKIVSKKHYFF-PSFLSFSTSLPSKLSVF 62
           V + NMLKPSK FDNVV+RLAWC+TNKK I +KIVSKKHYF   SFLS STSLPSK S F
Sbjct: 72  VTMLNMLKPSKFFDNVVDRLAWCITNKK-ISTKIVSKKHYFVSSSFLSLSTSLPSKPSDF 131

Query: 63  QLLDNVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEA 122
           +LLDNV TCIAFLQSCA+ KNL+KGKQLHS+MITYGFSHSPSSITSLINMY+KCG MEEA
Sbjct: 132 RLLDNVTTCIAFLQSCAESKNLNKGKQLHSVMITYGFSHSPSSITSLINMYSKCGRMEEA 191

Query: 123 ILVFHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCE 182
           +LVFHDPC+E NVFAYNA+ISGFV+NGL S GFQFYKQMR+EGVMPDKYTFPCVVRSCCE
Sbjct: 192 VLVFHDPCYEPNVFAYNAIISGFVANGLASIGFQFYKQMRLEGVMPDKYTFPCVVRSCCE 251

Query: 183 VMEVKKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMING 242
           VMEVKKIHGCLFKMGLELDLFVGSALVNTYLK+GSMEDAQEVFEEL I+DVVLWNAMING
Sbjct: 252 VMEVKKIHGCLFKMGLELDLFVGSALVNTYLKLGSMEDAQEVFEELPIRDVVLWNAMING 311

Query: 243 YAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSG 302
           YAQIGCLDEALE+FRRMHIEG++PSRFTITGILSIFAL+G L NGRTVHGIVMKMGYDSG
Sbjct: 312 YAQIGCLDEALEIFRRMHIEGVSPSRFTITGILSIFALKGHLDNGRTVHGIVMKMGYDSG 371

Query: 303 VAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLG 362
           VAVSNALIDMYGKCKHIGDALM+FE +NEKDIFSWNSIISVHEQCGDHDG LRLFDKMLG
Sbjct: 372 VAVSNALIDMYGKCKHIGDALMVFETMNEKDIFSWNSIISVHEQCGDHDGALRLFDKMLG 431

Query: 363 SGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDMY 422
           SG LPDLVTVTT+LPACSHLAALMHGREIHGYMIVNGLG+DGDNG +DDLLVNNAVMDMY
Sbjct: 432 SGFLPDLVTVTTILPACSHLAALMHGREIHGYMIVNGLGRDGDNGVIDDLLVNNAVMDMY 491

Query: 423 AKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTFV 482
           AKCGSM+NA KVF+ M++ DVASWNIMIMGYGMHGYGM+ALDMFS MCE KI PDEVTFV
Sbjct: 492 AKCGSMKNAQKVFNSMTNKDVASWNIMIMGYGMHGYGMDALDMFSHMCEAKIKPDEVTFV 551

Query: 483 GVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMPI 542
           GVLSACNH GFVCQGR FLAQME  FGVIPTIEHYTCVIDMLGRAGHLEDAY+LAQ MPI
Sbjct: 552 GVLSACNHAGFVCQGRWFLAQMEHDFGVIPTIEHYTCVIDMLGRAGHLEDAYDLAQTMPI 611

Query: 543 QANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLEV 602
           QANPVVWRALLGACRLHGNAELAE+AA++VMQL+PEHCGSYVLMSNVYGVVGRYEEVLEV
Sbjct: 612 QANPVVWRALLGACRLHGNAELAEIAAQKVMQLDPEHCGSYVLMSNVYGVVGRYEEVLEV 671

Query: 603 RKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 660
           R TMKEQ+V+KTPGCSWIELKDGVHVFLTGDRTH ELNALT+QLCDIGFILDEVLNLY
Sbjct: 672 RNTMKEQHVRKTPGCSWIELKDGVHVFLTGDRTHLELNALTSQLCDIGFILDEVLNLY 728

BLAST of Lcy04g005410 vs. NCBI nr
Match: XP_023517268.1 (pentatricopeptide repeat-containing protein At3g14730-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023517269.1 pentatricopeptide repeat-containing protein At3g14730-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1204.5 bits (3115), Expect = 0.0e+00
Identity = 580/658 (88.15%), Postives = 621/658 (94.38%), Query Frame = 0

Query: 3   VVVSNMLKPSKVFDNVVNRLAWCLTNKKIIFSKIVSKKHYFF-PSFLSFSTSLPSKLSVF 62
           V + NMLKPSK FDNVV+RLAWC+TNKK I +KIVSKKHYF   SFLS STSLPSK S F
Sbjct: 5   VTMLNMLKPSKFFDNVVDRLAWCITNKK-ISTKIVSKKHYFVSSSFLSLSTSLPSKPSDF 64

Query: 63  QLLDNVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEA 122
           +LLDNV TCIAFLQSCA+ KNL+KGKQLHS+MITYGFSHSPSSITSLINMY+KCG MEEA
Sbjct: 65  RLLDNVTTCIAFLQSCAESKNLNKGKQLHSVMITYGFSHSPSSITSLINMYSKCGRMEEA 124

Query: 123 ILVFHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCE 182
           +LVFHDPC+E NVFAYNA+ISGFV+NGL S GFQFYKQM++EGVMPDKYTFPCVVRSCCE
Sbjct: 125 VLVFHDPCYEPNVFAYNAIISGFVANGLASIGFQFYKQMKLEGVMPDKYTFPCVVRSCCE 184

Query: 183 VMEVKKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMING 242
           VMEVKKIHGCLFKMGLELDLFVGSALVNTYLK+GSMEDAQEVFEEL I+DVVLWNAMING
Sbjct: 185 VMEVKKIHGCLFKMGLELDLFVGSALVNTYLKLGSMEDAQEVFEELPIRDVVLWNAMING 244

Query: 243 YAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSG 302
           YAQIGCLDEALE+FRRMHIEG++PSRFTITGILSIFAL+G L NGRTVHGIVMKMGYDSG
Sbjct: 245 YAQIGCLDEALEIFRRMHIEGVSPSRFTITGILSIFALKGHLDNGRTVHGIVMKMGYDSG 304

Query: 303 VAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLG 362
           VAVSNAL+DMYGKCKHIGDALM+FE +NEKDIFSWNSIISVHEQCGDHDG LRLFDKMLG
Sbjct: 305 VAVSNALVDMYGKCKHIGDALMVFETMNEKDIFSWNSIISVHEQCGDHDGALRLFDKMLG 364

Query: 363 SGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDMY 422
           SG LPDLVTVTT+LPACSHLAALMHGREIHGYMIVNGLG+DGDNG +DDLLVNNAVMDMY
Sbjct: 365 SGFLPDLVTVTTILPACSHLAALMHGREIHGYMIVNGLGRDGDNGVIDDLLVNNAVMDMY 424

Query: 423 AKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTFV 482
           AKCGSM+NA KVF+ M++ DVASWNIMIMGYGMHGYGM+ALDMFS MCE KI PDEVTFV
Sbjct: 425 AKCGSMKNAQKVFNSMTNKDVASWNIMIMGYGMHGYGMDALDMFSHMCEAKIKPDEVTFV 484

Query: 483 GVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMPI 542
           GVLSACNH GFVCQGR FLAQME  FGVIPTIEHYTCVIDMLGRAGHLEDAY+LAQ MPI
Sbjct: 485 GVLSACNHAGFVCQGRSFLAQMEHDFGVIPTIEHYTCVIDMLGRAGHLEDAYDLAQTMPI 544

Query: 543 QANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLEV 602
           +ANPVVWRALLGACRLHGNAELAE+AA++VMQL+PEHCGSYVLMSNVYGVVGRYEEVLEV
Sbjct: 545 EANPVVWRALLGACRLHGNAELAEIAAQKVMQLDPEHCGSYVLMSNVYGVVGRYEEVLEV 604

Query: 603 RKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 660
           R TMKEQ+V+KTPGCSWIELKDGVHVFLTGDRTH ELNALT+QLCDIGFILDEVLNLY
Sbjct: 605 RNTMKEQHVRKTPGCSWIELKDGVHVFLTGDRTHLELNALTSQLCDIGFILDEVLNLY 661

BLAST of Lcy04g005410 vs. NCBI nr
Match: XP_022924900.1 (pentatricopeptide repeat-containing protein At3g14730 [Cucurbita moschata])

HSP 1 Score: 1204.1 bits (3114), Expect = 0.0e+00
Identity = 581/654 (88.84%), Postives = 618/654 (94.50%), Query Frame = 0

Query: 7   NMLKPSKVFDNVVNRLAWCLTNKKIIFSKIVSKKHYFF-PSFLSFSTSLPSKLSVFQLLD 66
           NMLKPSK FDNVV+RLAWC+TNKK I +KIVSKKHYF   SFLS STSLPSK S F+LLD
Sbjct: 3   NMLKPSKFFDNVVDRLAWCITNKK-ISTKIVSKKHYFVSSSFLSLSTSLPSKPSDFRLLD 62

Query: 67  NVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEAILVF 126
           NV TCIAFLQSCA+ KNL+KGKQLHS+MITYGFSHSPSSITSLINMY+KCG MEEA+LVF
Sbjct: 63  NVTTCIAFLQSCAESKNLNKGKQLHSVMITYGFSHSPSSITSLINMYSKCGRMEEAVLVF 122

Query: 127 HDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEVMEV 186
           HDPC+E NVFAYNA+ISGFV+NGL S GFQFYKQMR+EGVMPDKYTFPCVVRSCCEVMEV
Sbjct: 123 HDPCYEPNVFAYNAIISGFVANGLASIGFQFYKQMRLEGVMPDKYTFPCVVRSCCEVMEV 182

Query: 187 KKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMINGYAQI 246
           KKIHGCLFKMGLELDLFVGSALVNTYLK+GSMEDAQEVFEEL I+DVVLWNAMINGYAQI
Sbjct: 183 KKIHGCLFKMGLELDLFVGSALVNTYLKLGSMEDAQEVFEELPIRDVVLWNAMINGYAQI 242

Query: 247 GCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSGVAVS 306
           GCLDEALE+FRRMHIEG++PSRFTITGILSIFAL+G L NGRTVHGIVMKMGYDSGVAVS
Sbjct: 243 GCLDEALEIFRRMHIEGVSPSRFTITGILSIFALKGHLDNGRTVHGIVMKMGYDSGVAVS 302

Query: 307 NALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGIL 366
           NALIDMYGKCKHIGDALM+FE +NEKDIFSWNSIISVHEQCGDHDG LRLFDKMLGSG L
Sbjct: 303 NALIDMYGKCKHIGDALMVFETMNEKDIFSWNSIISVHEQCGDHDGALRLFDKMLGSGFL 362

Query: 367 PDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDMYAKCG 426
           PDLVTVTT+LPACSHLAALMHGREIHGYMIVNGLG+DGDNG +DDLLVNNAVMDMYAKCG
Sbjct: 363 PDLVTVTTILPACSHLAALMHGREIHGYMIVNGLGRDGDNGVIDDLLVNNAVMDMYAKCG 422

Query: 427 SMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTFVGVLS 486
           SM+NA KVF+ M++ DVASWNIMIMGYGMHGYGM+ALDM S MCE KI PDEVTFVGVLS
Sbjct: 423 SMKNAQKVFNSMTNKDVASWNIMIMGYGMHGYGMDALDMISHMCEAKIKPDEVTFVGVLS 482

Query: 487 ACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMPIQANP 546
           ACNH GFVCQGR FLAQME  FGVIPTIEHYTCVIDMLGRAGHLEDAY+LAQ MPIQANP
Sbjct: 483 ACNHAGFVCQGRWFLAQMEHDFGVIPTIEHYTCVIDMLGRAGHLEDAYDLAQTMPIQANP 542

Query: 547 VVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLEVRKTM 606
           VVWRALLGACRLHGNAELAE+AA++VMQL+PEHCGSYVLMSNVYGVVGRYEEVLEVR TM
Sbjct: 543 VVWRALLGACRLHGNAELAEIAAQKVMQLDPEHCGSYVLMSNVYGVVGRYEEVLEVRNTM 602

Query: 607 KEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 660
           KEQ+V+KTPGCSWIELKDGVHVFLTGDRTH ELNALT+QLCDIGFILDEVLNLY
Sbjct: 603 KEQHVRKTPGCSWIELKDGVHVFLTGDRTHLELNALTSQLCDIGFILDEVLNLY 655

BLAST of Lcy04g005410 vs. NCBI nr
Match: XP_022152247.1 (pentatricopeptide repeat-containing protein At3g14730-like [Momordica charantia])

HSP 1 Score: 1203.7 bits (3113), Expect = 0.0e+00
Identity = 589/656 (89.79%), Postives = 618/656 (94.21%), Query Frame = 0

Query: 4   VVSNMLKPSKVFDNVVNRLAWCLTNKKIIFSKIVSKKHYFFPSFLSFSTSLPSKLSVFQL 63
           +VSNMLKP KVFD+VV+RLAWCLT KKI FSKIVSKKHY F SFLSFSTS PSK SVFQL
Sbjct: 1   MVSNMLKPHKVFDDVVDRLAWCLTTKKINFSKIVSKKHYLFSSFLSFSTSPPSKCSVFQL 60

Query: 64  LDNVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEAIL 123
           L+NV T I+FLQSCADHKNL++GKQLHSLMITYGFSHSPSSITSLINMY+KCG MEEAIL
Sbjct: 61  LENVTTSISFLQSCADHKNLNRGKQLHSLMITYGFSHSPSSITSLINMYSKCGQMEEAIL 120

Query: 124 VFHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEVM 183
           VFHDPCHERNVFAYNALISGFV+NGL SNG QFYKQMR+EGVMPDKYTFPCVVRSCCE M
Sbjct: 121 VFHDPCHERNVFAYNALISGFVANGLASNGLQFYKQMRLEGVMPDKYTFPCVVRSCCEAM 180

Query: 184 EVKKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMINGYA 243
           EVKKIHGCLFKMGLELD+FVGSALVNTYLKIG ME+AQ+VFEELSI+DVVLWNA+INGYA
Sbjct: 181 EVKKIHGCLFKMGLELDMFVGSALVNTYLKIGLMENAQKVFEELSIRDVVLWNALINGYA 240

Query: 244 QIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSGVA 303
           QIGCLDEALEVFRRM IEGI PSRFT+TGILSIFALRGDL NGRTVH IV KMGY+ GVA
Sbjct: 241 QIGCLDEALEVFRRMSIEGILPSRFTVTGILSIFALRGDLNNGRTVHAIVTKMGYNLGVA 300

Query: 304 VSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSG 363
           V NALIDMYGKCKHI DALMIF+MI+EKDIFSWNSIISVHEQ GDHDGTLRLFDKMLGSG
Sbjct: 301 VLNALIDMYGKCKHIRDALMIFKMIDEKDIFSWNSIISVHEQYGDHDGTLRLFDKMLGSG 360

Query: 364 ILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDMYAK 423
           ILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNG GKD   G VDDLLVNNAVMDMYAK
Sbjct: 361 ILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGFGKD---GGVDDLLVNNAVMDMYAK 420

Query: 424 CGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTFVGV 483
           CGSM+NA  VFDLMS+ DVASWNI+IMGYGMHGYGMEALD+FS MCE +I PDEVTFVGV
Sbjct: 421 CGSMKNALMVFDLMSNKDVASWNIVIMGYGMHGYGMEALDIFSCMCEARIKPDEVTFVGV 480

Query: 484 LSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMPIQA 543
           LSACNH GFV QGRLFLAQMES+FGVIPTIEHYTCVIDMLGRAGHL+DAYELAQKMPIQA
Sbjct: 481 LSACNHAGFVSQGRLFLAQMESEFGVIPTIEHYTCVIDMLGRAGHLKDAYELAQKMPIQA 540

Query: 544 NPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLEVRK 603
           NP+VWRALLGACRLHGNAELAEVAAR+VMQLEPEHCGSYVLMSNVYGVVGRY EVLEVRK
Sbjct: 541 NPIVWRALLGACRLHGNAELAEVAARKVMQLEPEHCGSYVLMSNVYGVVGRYGEVLEVRK 600

Query: 604 TMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQLCDIGFILDEVLNLY 660
           TMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNAL NQLCDIG+ILDEVLNLY
Sbjct: 601 TMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALANQLCDIGYILDEVLNLY 653

BLAST of Lcy04g005410 vs. TAIR 10
Match: AT3G14730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 675.6 bits (1742), Expect = 3.9e-194
Identity = 328/584 (56.16%), Postives = 425/584 (72.77%), Query Frame = 0

Query: 66  NVNTCIAFLQSCADHKNLSKGKQLHSLMITYGF-SHSPSSITSLINMYTKCGHMEEAILV 125
           NV TCIA LQ CA  K+   G+Q+H  M+  GF   SP + TSL+NMY KCG M  A+LV
Sbjct: 59  NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118

Query: 126 FHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVR--SCCEV 185
           F     ER+VF YNALISGFV NG   +  + Y++MR  G++PDKYTFP +++     E+
Sbjct: 119 FGG--SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMEL 178

Query: 186 MEVKKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIK-DVVLWNAMING 245
            +VKK+HG  FK+G + D +VGS LV +Y K  S+EDAQ+VF+EL  + D VLWNA++NG
Sbjct: 179 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 238

Query: 246 YAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSG 305
           Y+QI   ++AL VF +M  EG+  SR TIT +LS F + GD+ NGR++HG+ +K G  S 
Sbjct: 239 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD 298

Query: 306 VAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLG 365
           + VSNALIDMYGK K + +A  IFE ++E+D+F+WNS++ VH+ CGDHDGTL LF++ML 
Sbjct: 299 IVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLC 358

Query: 366 SGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDMY 425
           SGI PD+VT+TTVLP C  LA+L  GREIHGYMIV+GL     N    +  ++N++MDMY
Sbjct: 359 SGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGL----LNRKSSNEFIHNSLMDMY 418

Query: 426 AKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTFV 485
            KCG +R+A  VFD M   D ASWNIMI GYG+   G  ALDMFS MC   + PDE+TFV
Sbjct: 419 VKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFV 478

Query: 486 GVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMPI 545
           G+L AC+H GF+ +GR FLAQME+ + ++PT +HY CVIDMLGRA  LE+AYELA   PI
Sbjct: 479 GLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPI 538

Query: 546 QANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLEV 605
             NPVVWR++L +CRLHGN +LA VA +++ +LEPEHCG YVLMSNVY   G+YEEVL+V
Sbjct: 539 CDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDV 598

Query: 606 RKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQL 646
           R  M++QNVKKTPGCSWI LK+GVH F TG++TH E  ++ + L
Sbjct: 599 RDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWL 636

BLAST of Lcy04g005410 vs. TAIR 10
Match: AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 419.9 bits (1078), Expect = 3.9e-117
Identity = 226/615 (36.75%), Postives = 349/615 (56.75%), Query Frame = 0

Query: 56  SKLSVFQLLDNVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKC 115
           S + + Q+  N  T    L  CA    +  G QLH L++  G     S   SL++MY+KC
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287

Query: 116 GHMEEAILVFHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCV 175
           G  ++A  +F       +   +N +ISG+V +GL      F+ +M   GV+PD  TF  +
Sbjct: 288 GRFDDASKLFR-MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 347

Query: 176 VRSCCEVMEV---KKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDV 235
           + S  +   +   K+IH  + +  + LD+F+ SAL++ Y K   +  AQ +F + +  DV
Sbjct: 348 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 407

Query: 236 VLWNAMINGYAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGI 295
           V++ AMI+GY   G   ++LE+FR +    I+P+  T+  IL +  +   L  GR +HG 
Sbjct: 408 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 467

Query: 296 VMKMGYDSGVAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGT 355
           ++K G+D+   +  A+IDMY KC  +  A  IFE ++++DI SWNS+I+   Q  +    
Sbjct: 468 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 527

Query: 356 LRLFDKMLGSGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLL 415
           + +F +M  SGI  D V+++  L AC++L +   G+ IHG+MI + L          D+ 
Sbjct: 528 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSL--------ASDVY 587

Query: 416 VNNAVMDMYAKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEK 475
             + ++DMYAKCG+++ A  VF  M + ++ SWN +I   G HG   ++L +F  M E+ 
Sbjct: 588 SESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 647

Query: 476 -IMPDEVTFVGVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLED 535
            I PD++TF+ ++S+C HVG V +G  F   M   +G+ P  EHY CV+D+ GRAG L +
Sbjct: 648 GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 707

Query: 536 AYELAQKMPIQANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGV 595
           AYE  + MP   +  VW  LLGACRLH N ELAEVA+ ++M L+P + G YVL+SN +  
Sbjct: 708 AYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHAN 767

Query: 596 VGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSE-------LNALTNQ 655
              +E V +VR  MKE+ V+K PG SWIE+    H+F++GD  H E       LN+L  +
Sbjct: 768 AREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGE 827

Query: 656 LCDIGFILDEVLNLY 660
           L   G+I    L L+
Sbjct: 828 LRLEGYIPQPYLPLH 833

BLAST of Lcy04g005410 vs. TAIR 10
Match: AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 418.3 bits (1074), Expect = 1.1e-116
Identity = 212/587 (36.12%), Postives = 343/587 (58.43%), Query Frame = 0

Query: 66  NVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEAILVF 125
           +V T    L++C    +L++GK++H  ++ YG+      + +LI MY KCG ++ A L+F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254

Query: 126 HDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEVMEV 185
            D    R++ ++NA+ISG+  NG+   G + +  MR   V PD  T   V+ S CE++  
Sbjct: 255 -DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI-SACELLGD 314

Query: 186 KK----IHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMING 245
           ++    IH  +   G  +D+ V ++L   YL  GS  +A+++F  +  KD+V W  MI+G
Sbjct: 315 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 374

Query: 246 YAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSG 305
           Y      D+A++ +R M  + + P   T+  +LS  A  GDL  G  +H + +K    S 
Sbjct: 375 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 434

Query: 306 VAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIIS---VHEQCGDHDGTLRLFDK 365
           V V+N LI+MY KCK I  AL IF  I  K++ SW SII+   ++ +C +      +F +
Sbjct: 435 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFE----ALIFLR 494

Query: 366 MLGSGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVM 425
            +   + P+ +T+T  L AC+ + ALM G+EIH +++  G+G       +DD L  NA++
Sbjct: 495 QMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVG-------LDDFL-PNALL 554

Query: 426 DMYAKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEV 485
           DMY +CG M  A   F+     DV SWNI++ GY   G G   +++F RM + ++ PDE+
Sbjct: 555 DMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEI 614

Query: 486 TFVGVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQK 545
           TF+ +L  C+    V QG ++ ++ME  +GV P ++HY CV+D+LGRAG L++A++  QK
Sbjct: 615 TFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQK 674

Query: 546 MPIQANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEV 605
           MP+  +P VW ALL ACR+H   +L E++A+ + +L+ +  G Y+L+ N+Y   G++ EV
Sbjct: 675 MPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREV 734

Query: 606 LEVRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSELNALTNQL 646
            +VR+ MKE  +    GCSW+E+K  VH FL+ D+ H +   +   L
Sbjct: 735 AKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVL 765

BLAST of Lcy04g005410 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 415.6 bits (1067), Expect = 7.4e-116
Identity = 216/620 (34.84%), Postives = 354/620 (57.10%), Query Frame = 0

Query: 81  KNLSKGKQLHSLMI-TYGFSHSPSSITSLINMYTKCGHMEEAILVFHDPCHERNVFAYNA 140
           K+ S+ KQLH+  I T   SH+ +SI  +I++YT    + EA+L+F        V A+ +
Sbjct: 19  KSKSQAKQLHAQFIRTQSLSHTSASI--VISIYTNLKLLHEALLLF-KTLKSPPVLAWKS 78

Query: 141 LISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEVMEVK---KIHGCLFKMG 200
           +I  F    L S     + +MR  G  PD   FP V++SC  +M+++    +HG + ++G
Sbjct: 79  VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 138

Query: 201 LELDLFVGSALVNTYLKIGSM------------------------------------EDA 260
           ++ DL+ G+AL+N Y K+  M                                    +  
Sbjct: 139 MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV 198

Query: 261 QEVFEELSIKDVVLWNAMINGYAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALR 320
           + VFE +  KDVV +N +I GYAQ G  ++AL + R M    + P  FT++ +L IF+  
Sbjct: 199 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 258

Query: 321 GDLGNGRTVHGIVMKMGYDSGVAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSII 380
            D+  G+ +HG V++ G DS V + ++L+DMY K   I D+  +F  +  +D  SWNS++
Sbjct: 259 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 318

Query: 381 SVHEQCGDHDGTLRLFDKMLGSGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLG 440
           + + Q G ++  LRLF +M+ + + P  V  ++V+PAC+HLA L  G+++HGY++  G G
Sbjct: 319 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 378

Query: 441 KDGDNGAVDDLLVNNAVMDMYAKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGME 500
                    ++ + +A++DMY+KCG+++ A K+FD M+  D  SW  +IMG+ +HG+G E
Sbjct: 379 --------SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHE 438

Query: 501 ALDMFSRMCEEKIMPDEVTFVGVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVI 560
           A+ +F  M  + + P++V FV VL+AC+HVG V +   +   M   +G+   +EHY  V 
Sbjct: 439 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 498

Query: 561 DMLGRAGHLEDAYELAQKMPIQANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCG 620
           D+LGRAG LE+AY    KM ++    VW  LL +C +H N ELAE  A ++  ++ E+ G
Sbjct: 499 DLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMG 558

Query: 621 SYVLMSNVYGVVGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSE--- 654
           +YVLM N+Y   GR++E+ ++R  M+++ ++K P CSWIE+K+  H F++GDR+H     
Sbjct: 559 AYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDK 618

BLAST of Lcy04g005410 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 411.4 bits (1056), Expect = 1.4e-114
Identity = 230/637 (36.11%), Postives = 358/637 (56.20%), Query Frame = 0

Query: 7   NMLKPSKVFDNV--VNRLAWCLTNKKIIFSKIVSKKHYFFPSFLSFSTSLPSKLSVFQLL 66
           ++ + S+VFD V     L W +   ++  S   S     F   +S    + S        
Sbjct: 144 DLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDS-------- 203

Query: 67  DNVNTCIAFLQSCADHKNLSKGKQLHSLMITYGFSHSPSSITSLINMYTKCGHMEEAILV 126
               +C++  +S +  +++  G+QLH  ++  GF    S   SL+  Y K   ++ A  V
Sbjct: 204 -YTFSCVS--KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKV 263

Query: 127 FHDPCHERNVFAYNALISGFVSNGLNSNGFQFYKQMRVEGVMPDKYTFPCVVRSCCEVME 186
           F D   ER+V ++N++I+G+VSNGL   G   + QM V G+  D  T   V   C +   
Sbjct: 264 F-DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRL 323

Query: 187 V---KKIHGCLFKMGLELDLFVGSALVNTYLKIGSMEDAQEVFEELSIKDVVLWNAMING 246
           +   + +H    K     +    + L++ Y K G ++ A+ VF E+S + VV + +MI G
Sbjct: 324 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 383

Query: 247 YAQIGCLDEALEVFRRMHIEGIAPSRFTITGILSIFALRGDLGNGRTVHGIVMKMGYDSG 306
           YA+ G   EA+++F  M  EGI+P  +T+T +L+  A    L  G+ VH  + +      
Sbjct: 384 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD 443

Query: 307 VAVSNALIDMYGKCKHIGDALMIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKML- 366
           + VSNAL+DMY KC  + +A ++F  +  KDI SWN+II  + +    +  L LF+ +L 
Sbjct: 444 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 503

Query: 367 GSGILPDLVTVTTVLPACSHLAALMHGREIHGYMIVNGLGKDGDNGAVDDLLVNNAVMDM 426
                PD  TV  VLPAC+ L+A   GREIHGY++         NG   D  V N+++DM
Sbjct: 504 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIM--------RNGYFSDRHVANSLVDM 563

Query: 427 YAKCGSMRNAHKVFDLMSDNDVASWNIMIMGYGMHGYGMEALDMFSRMCEEKIMPDEVTF 486
           YAKCG++  AH +FD ++  D+ SW +MI GYGMHG+G EA+ +F++M +  I  DE++F
Sbjct: 564 YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF 623

Query: 487 VGVLSACNHVGFVCQGRLFLAQMESKFGVIPTIEHYTCVIDMLGRAGHLEDAYELAQKMP 546
           V +L AC+H G V +G  F   M  +  + PT+EHY C++DML R G L  AY   + MP
Sbjct: 624 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP 683

Query: 547 IQANPVVWRALLGACRLHGNAELAEVAARQVMQLEPEHCGSYVLMSNVYGVVGRYEEVLE 606
           I  +  +W ALL  CR+H + +LAE  A +V +LEPE+ G YVLM+N+Y    ++E+V  
Sbjct: 684 IPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKR 743

Query: 607 VRKTMKEQNVKKTPGCSWIELKDGVHVFLTGDRTHSE 638
           +RK + ++ ++K PGCSWIE+K  V++F+ GD ++ E
Sbjct: 744 LRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPE 760

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LUC25.6e-19356.16Pentatricopeptide repeat-containing protein At3g14730 OS=Arabidopsis thaliana OX... [more]
Q9STE15.5e-11636.75Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... [more]
Q9M9E21.6e-11536.12Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... [more]
Q9LW631.0e-11434.84Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
Q9SN392.0e-11336.11Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
A0A6J1EGD00.0e+0088.84pentatricopeptide repeat-containing protein At3g14730 OS=Cucurbita moschata OX=3... [more]
A0A6J1DFN80.0e+0089.79pentatricopeptide repeat-containing protein At3g14730-like OS=Momordica charanti... [more]
A0A6J1HNR10.0e+0088.15pentatricopeptide repeat-containing protein At3g14730-like isoform X1 OS=Cucurbi... [more]
A0A6J1HME00.0e+0088.53pentatricopeptide repeat-containing protein At3g14730-like isoform X2 OS=Cucurbi... [more]
A0A1S4E0R70.0e+0087.06pentatricopeptide repeat-containing protein At3g14730-like OS=Cucumis melo OX=36... [more]
Match NameE-valueIdentityDescription
XP_038881250.10.0e+0090.26pentatricopeptide repeat-containing protein At3g14730-like [Benincasa hispida][more]
KAG6595676.10.0e+0088.60Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023517268.10.0e+0088.15pentatricopeptide repeat-containing protein At3g14730-like isoform X1 [Cucurbita... [more]
XP_022924900.10.0e+0088.84pentatricopeptide repeat-containing protein At3g14730 [Cucurbita moschata][more]
XP_022152247.10.0e+0089.79pentatricopeptide repeat-containing protein At3g14730-like [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT3G14730.13.9e-19456.16Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G21300.13.9e-11736.75Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G15510.11.1e-11636.12Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G23330.17.4e-11634.84Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G18750.11.4e-11436.11Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 494..627
e-value: 6.5E-14
score: 54.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 402..493
e-value: 1.8E-19
score: 71.8
coord: 56..187
e-value: 2.1E-23
score: 84.6
coord: 188..283
e-value: 8.6E-20
score: 72.8
coord: 284..387
e-value: 2.5E-20
score: 74.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 111..360
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 209..601
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 106..126
e-value: 0.008
score: 16.4
coord: 206..227
e-value: 1.1
score: 9.7
coord: 515..539
e-value: 0.024
score: 14.9
coord: 581..610
e-value: 0.089
score: 13.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 444..477
e-value: 2.6E-6
score: 25.2
coord: 136..168
e-value: 9.5E-4
score: 17.2
coord: 415..442
e-value: 0.0012
score: 16.9
coord: 233..266
e-value: 2.8E-9
score: 34.6
coord: 334..367
e-value: 4.2E-5
score: 21.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 132..180
e-value: 1.9E-11
score: 44.0
coord: 331..378
e-value: 1.9E-8
score: 34.4
coord: 441..487
e-value: 2.0E-9
score: 37.5
coord: 230..275
e-value: 1.3E-9
score: 38.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 133..167
score: 11.005202
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 231..265
score: 13.526301
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 441..475
score: 10.64348
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 332..366
score: 11.257313
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 65..637
NoneNo IPR availablePANTHERPTHR47928:SF61OS01G0818200 PROTEINcoord: 65..637

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g005410.1Lcy04g005410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding