Lcy04g002720 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTTCTGCCTTTTCCTTCCTTCTTTCATTTTCTTGTGTTTTTGGAGCAAATTGGAGAGAAGAAAGTAATGATAATAATGCTGCTGATCAATTTCCTTGTGTTGGTGCTGCTGATTATCATATGTCGATGTCTGGTGGCGCGATTGAAGAGAAGAAGATGGAGTCTGTTTTCTCCGCTTGTAATGACATTTTGTTGGAAGAGATCAATGGCTTTTGCGGTGAAGATAGATTTTTAAACGTGGATGTTGAAACCCATCAAGGGGATAATGCTAGCAATCTTGCAAATGCATTGCACCACAAAAGGAAGTCCATTGTTGTCGTTGGTGATGATGATCTTGATCACAACAAGCTCAACAACGACCCCAATAAGAGCATTCATGCTTCAAACAATGTAAGTAAATTTATCGTAACCCATCAACTTAAAATTTTAAATTCATTAGTTTTTTCAAGTGTTAAAGATAACGAGTTCGATCTTCATGCATATTCTTGTGATAGTATGATATTGTCCACTCTAAACTAATTTCAGTACTCAAAGTTCCATATCATTGAAATATTACCACGTGGAACATTATTTGTTTTTCCAATGTTAATATACATGATATAAGATTAGGATGACATCTAGGTTTAGGTAGGTTTAAAGATTTGTAAATTTCTAGTTTGGGATAAACAAATATGTATACTAATCCTAAGTTTGTGTTTTGGGTTTAGAAAGGGTCATTTTGATATTATGATATGATTATGTTTTGTCTATTTAACTTGCTAGAGGAAGGGAAGGACATGAGAAAAAGTAGTGTAAGACAATGAGGAAGGGAAGGGCATGAGAAAAAGTAGTGAAGACAGTAGTCTTCGAGAGAATTCAACCCTCTCGAATTGGTTGAAATCTAACCGAAACCCAAAAAGAGTGATGAATTTGACCAAACTATAGAGCTCCATTGATTGGTTTTGAAAGTATATATATATATTTTCTAGAGCATAAAACTGAAAAATAAAGATCGATTCAGTTTGGATAGATTTTGTTTGTTTTAGTCGGTTTGATTCACCTAGTTCAGCTCCATTGGGTTGCTGCATTTCTCTTGGTTATTGGGTGATTAACAATTGTGTCCAGTTAGATTTTCATTAACTTTTGGGGCTTGGTAATGATTAATGGAATTTAAGGATGTTGAGTTAGTTTTGTATTTTGATGTCATGTGGTATTTGGATATTTGCAGGCAACAATGGAATATGGAGAGGCTGAGTCATTTTCTCTGTTATTGGTCCTCGAAGCATTCACCTTTCTGGTTATTTTCTAA ATGTTTTCTGCCTTTTCCTTCCTTCTTTCATTTTCTTGTGTTTTTGGAGCAAATTGGAGAGAAGAAAGTAATGATAATAATGCTGCTGATCAATTTCCTTGTGTTGGTGCTGCTGATTATCATATGTCGATGTCTGGTGGCGCGATTGAAGAGAAGAAGATGGAGTCTGTTTTCTCCGCTTGTAATGACATTTTGTTGGAAGAGATCAATGGCTTTTGCGGTGAAGATAGATTTTTAAACGTGGATGTTGAAACCCATCAAGGGGATAATGCTAGCAATCTTGCAAATGCATTGCACCACAAAAGGAAGTCCATTGTTGTCGTTGGTGATGATGATCTTGATCACAACAAGCTCAACAACGACCCCAATAAGAGCATTCATGCTTCAAACAATGCAACAATGGAATATGGAGAGGCTGAGTCATTTTCTCTGTTATTGGTCCTCGAAGCATTCACCTTTCTGGTTATTTTCTAA ATGTTTTCTGCCTTTTCCTTCCTTCTTTCATTTTCTTGTGTTTTTGGAGCAAATTGGAGAGAAGAAAGTAATGATAATAATGCTGCTGATCAATTTCCTTGTGTTGGTGCTGCTGATTATCATATGTCGATGTCTGGTGGCGCGATTGAAGAGAAGAAGATGGAGTCTGTTTTCTCCGCTTGTAATGACATTTTGTTGGAAGAGATCAATGGCTTTTGCGGTGAAGATAGATTTTTAAACGTGGATGTTGAAACCCATCAAGGGGATAATGCTAGCAATCTTGCAAATGCATTGCACCACAAAAGGAAGTCCATTGTTGTCGTTGGTGATGATGATCTTGATCACAACAAGCTCAACAACGACCCCAATAAGAGCATTCATGCTTCAAACAATGCAACAATGGAATATGGAGAGGCTGAGTCATTTTCTCTGTTATTGGTCCTCGAAGCATTCACCTTTCTGGTTATTTTCTAA MFSAFSFLLSFSCVFGANWREESNDNNAADQFPCVGAADYHMSMSGGAIEEKKMESVFSACNDILLEEINGFCGEDRFLNVDVETHQGDNASNLANALHHKRKSIVVVGDDDLDHNKLNNDPNKSIHASNNATMEYGEAESFSLLLVLEAFTFLVIF Homology
BLAST of Lcy04g002720 vs. ExPASy TrEMBL
Match: A0A6J1IQF1 (transcription factor bHLH54-like OS=Cucurbita maxima OX=3661 GN=LOC111477249 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27 Identity = 67/107 (62.62%), Postives = 81/107 (75.70%), Query Frame = 0
BLAST of Lcy04g002720 vs. ExPASy TrEMBL
Match: A0A6J1FEZ9 (transcription factor bHLH139-like OS=Cucurbita moschata OX=3662 GN=LOC111443476 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27 Identity = 69/107 (64.49%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of Lcy04g002720 vs. ExPASy TrEMBL
Match: A0A0A0L533 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642470 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 3.8e-10 Identity = 60/136 (44.12%), Postives = 79/136 (58.09%), Query Frame = 0
BLAST of Lcy04g002720 vs. ExPASy TrEMBL
Match: A0A5D3D9B7 (Transcription factor bHLH85-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002780 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.1e-09 Identity = 58/125 (46.40%), Postives = 73/125 (58.40%), Query Frame = 0
BLAST of Lcy04g002720 vs. ExPASy TrEMBL
Match: A0A1S3BU96 (transcription factor bHLH85-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493599 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.1e-09 Identity = 58/125 (46.40%), Postives = 73/125 (58.40%), Query Frame = 0
BLAST of Lcy04g002720 vs. NCBI nr
Match: KAG7024298.1 (Transcription factor bHLH84 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 139.0 bits (349), Expect = 3.4e-29 Identity = 70/107 (65.42%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of Lcy04g002720 vs. NCBI nr
Match: KAG6591418.1 (Transcription factor basic helix-loop-helix 85, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 136.3 bits (342), Expect = 2.2e-28 Identity = 69/107 (64.49%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of Lcy04g002720 vs. NCBI nr
Match: XP_022977069.1 (transcription factor bHLH54-like [Cucurbita maxima]) HSP 1 Score: 132.9 bits (333), Expect = 2.4e-27 Identity = 67/107 (62.62%), Postives = 81/107 (75.70%), Query Frame = 0
BLAST of Lcy04g002720 vs. NCBI nr
Match: XP_022937063.1 (transcription factor bHLH139-like [Cucurbita moschata]) HSP 1 Score: 132.9 bits (333), Expect = 2.4e-27 Identity = 69/107 (64.49%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of Lcy04g002720 vs. NCBI nr
Match: XP_023536485.1 (transcription factor bHLH84-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 131.3 bits (329), Expect = 7.1e-27 Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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