Lcy04g002530 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g002530
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Thioredoxin
Location	Chr04: 18681177 .. 18688798 (-)
RNA-Seq Expression	Lcy04g002530
Synteny	Lcy04g002530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGCTCCATTCCTCTTCTCTCTCATTTCAAATCCCAAACCCCCAAAAAGAAAAAAAAGAAAAAAAAAAAAAAAAAAAATCTTCCTTCACAAACCAAAACCATGAGCCCCTAAAACGTACACCTAGAAAAAAGATACAGAGAGGATATAGAGATGTCTGTTTTGGCTGCAAGTGGTTCTCAGATTCTGTACAGAGAAGTTCATGAACACCAAATACTCCGTAATGGGAGGCTCTGTTTTGTGAATCGTGATTTTGGATCTCTTTTGTTTGGGCGGAGAAATGGAGCGCGGCGGAGGGAGTTGAAGCTGAGGGCGGAGGCTGGGTTTTGGCCGGATTTGTCGCGGCCGTCGCTGGTGGAGATGGAGTCCATTGATGATTCCGATCACCTCGATCGGATTTTGCTTCACGCCCACGACTTATCTCAGCCCGTTCTCATCGATTGGTTCCTATCTATCTCTTTATCTTCTCCAACTTTTCATTTCCGCACTTTACTTTTCCAATAATTCACGCTTGCTTTCTAATTTCTCCACTTATCTTACCACATTTCTTCTTCCAAACCCCTATCTTAATTACATACCTTAACTTCAAATATATAAATATAGATTAGCTATTTTCTTAAAAAAGATTTATTTGGGTTAAATTATAAATTTGGTAGTTTTTAGTTCAATATCTAGATTGAAACTTTTGAAACCATAAGCTAAGCACTCAGTTGAAAATCTTCCTAAATCATAAAGACTAAATTTGGAATTTACCATTTTTGTTTCTCACTCTTGGGTCACCTATGGCTATGGGTGCTTCTTTTGTATGTAATTTAAATTGTAATCTTTTTTAATACAACAACATTTGGAGGTGGGGGATTCGAACCTCTGATCTAGGTGGTCGAGAGTATATGCCAATTACCGCTGAACTATGCTCACCTTGGCTCAATAATACAAAATCTTGTTAAAGTTGGTGATAAAATATATTAAGGTTGAAATAAATTTGTAATGATTAGGGGGATTGATTGATACACGATGTTAACTCATCAAAATTCATTTAATAAACATAGTATGTCAAAATTTCATTAATGGTATTAAAGGTAGAGAATAAATGGAAGCATAATTTAAAGTGGGGAAATTTTCAATTTATAACCTTGAGCTTAGATGGAATGATAAAGAAAAAACCTCAAGCAATTGAGTCTAAGAAACCAAATGGAAATGGTTCAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAACCAAATGGAAATGCAAACCGTTAGATTACCCTTCTTAAACTCCCAGAAATCAACCAAGGATAAGATTAGAATTGGATTTACCCCGTGAACTAATATCTCAAGGGTAGGAAGATTGTTCTTGTTTGAGATTCAAATCACTCCACAAGCAAGCTTTTGTTATGTATCTAACTCGATAAACCTGTGATAAAACACCAAGAACACACAAACTAGGGAGATAAAGACCCAACTCTGTACTATTGAGGGTTCTTCAATAGCCAAAGTGGGTTATTCAGCCACAATATATTGATAATCTTCAAAGAAAACACAAGAACAATGGGAACAAGGTAAGAAAAGAACTTTCCAACAATTCGAGAGGTTGGTTTCTCTCCTCTTCAGACTACTCTCAGCCTAAGACAAAATGTTTCCTACCTCCCCACATTCCCTGCTCCCCAATACATCAAAAACTCACTCCCACGTTCGCAGTGGTCCCCTCTCTCTGTAACGATTTCCCATCTTTTCCTATCTTGCCCCTTCTTTTGTACACACGCGTAATAGGAGGTCTTACAGCTTCCAAAGGGATTACAACCATAAGATTAGAATTAGAATTTGATTTATCCTGTGAACTTGGATAGCGTGAAGGGTATAACTCTTACATCTTCCTTGAAGTCCTTGTGGCATGACTAATGACACCTCTATTCACATCATGATGATATGAATCTCGATATGACTTAAAACTGGAGTTCAACGAGTTAATTTTACTTGTTTCATGCCAAGAACACCTTCAAGATTGAGTTGCATGAAATGCACTCAGACTTCATTTATGATGAATGGAAGTTAAACTCAAGTTGCAGATTAATGGAATTTAAACTTAGATTGCATTAAGGGGAATCAAGTTTCGTTAAAGTTGAAGTTGAGTTGCATTAGATAAACTTTAAGTGTAACTCATACTCGAACTTCATTTGGGGTAAATCATCCATCAATTAATGAAACTACATTTCAACATACTCAAAACTAAATGGAGTTTCATTTATACTTGAGGAGGTTACAAAGATTTAGTGGGCTAATGAAGACTTCAATTCTTACCTTTTTTGCTTTCTGTCAAGTTATTTTCCGTTCTAGATTTTTTTTCATTACTTCTAGGTTACTTTTGGCTTAAAATCATCTAATTTGTTTTGCAAAAGAAGATTTGAGTTTTGATCGTAATGAAGGTTGTGTTAGACATGAGTTACTTCATTTACATAACTTGTGTTTAGATTTGCATGTTGTGGATGATTAAGTAGTACTGATGAAATTACTTGTGGAGTGATTTGAATCTTGAGTTTAAAAACAAGTTTTCTCTACTCTTGATTTTGATCGCGGATTTTAGCATTTGTGATCTAGAGGTTTGCATAACCATTAGGATTCGTGAGGGCTTCTTAGGTCTAAATTACTAGAGTTATTTTATTAGTGAATTTGTTTTAAACTTTAAATTTCATCCATTTAAATCATAACCTTGAATAAGTTTTGCAATAGTGGTGCCAATATACTCTCAATTAGTTAAGTTTATCTTTTTTTTTAAAAAGAAAAAAGAAAGAAATGTAACTAACTACAAGTATTCTTATAGTTGGATAAGACTATTTTTCGGAATACTCATTCTTCAAATTATGTTAGATATTTTTAATTGATTGGGTCGAGACATTTTATTCCTTTAAAATTTTTATTTGCTTGATTTTGTGATACTATGGATACATCAAATTCATGTTCAACAAGCTTGTCTTCATAAATATTTTCAAGTTATTTTCTATAACATTTTGTAAGGTAATTCCCTCAAGCCCATTTTTAAAAACATTTCTCTTAATTTTGTTTTCTTTCTTTAAATAAATAAACAAAGAAAAAGGAAAACGTACATTGAGGTTTCCTATTCAGCATTTTAATAAATTAGTTATCTAACCTTTTCTTTTTCTTTGTAATAAATGGGTAATAGGATGGCAACTTGGTGTAGGAAATGCATCTATTTGAAGCCAAAACTGGAGAAACTTGCTGCTGACTATGTTACCAAGTAACCCTCTATCTTCCTCATTCTTAGAAAATAAATCTTATTTTAAAGTTCATCTCTCTCAATTTCATTTGCCTTTCATTTATTTAAAAAGGTTAAAAGTTAAATTACAATGGTAGTTTGTAAACTTTTATGGTTGTACTAATTTACTCTTTAGGATTTGAAAAGTTTAGACCTCGTTTGATAACCATTTGGTATTGTCTTTTTTGAAAATTAAACTTATAAACACTACTTCTACCAATAAGTTCACTTGTTTTGTTATCTACTTTCTTCCCATGTTTTCAAAAACCAAATCATGTTTTGAAAACTAAGGCCCCATTTAATTTGATAACCATTTGGTTTTTGGTTTTTGGTTTTCAAAAATTAAGCTTATAATCACTACTCCTACCTATAAGATTCTTTGTTTTGCTATCTACTTTCTTCCCATGTTTTCAAAAACCAAGTCAAAATTTGAAAACTAAAAAAAGTAGTTTCCAAAAACTTTTTTTTTTTTTTTGAAATTTGGTTATAGATTCAAATGTGTCCTCCACAAAGATGAAAACTATCCTAAGAAAATTGGGAGAAAACAAGCGTAAAACAAGCATAATTTTCAAAAACCAAAAACCAAAAACCAAATGGTTATCAAACGTGGCCTAAAAAACTAGTTTTCAAAATTTTGTTTTTGTTTTTGGAATTTGGCTAGAAATTCAAATATGTCCTTAACAAAAATGAAAACCATTGTAAGGAAATTCGGAGAAAACGAGCATAATTTTCAAAAACCAAATGGTTGTCAAACGGAACTGTAAATTGTTTCTGAACTTTCAATTTTAGTTTTAACAAGTTTCTATAGTGATAATATGTTTGTCGAGCTATTGAGTGATGATTTAATACAACATAATATAAGAAAATAGGTTAAAAAGAAGGTGCAGATGGACCTAAAAATTTGGTTTAAAATATTGCCAACCCACCCTATAAAATCTTTTACTCTCAAACTCTTATTTTATCTTTAAATTGAAGTACTTTCGTATGTCACATTGTGTAAAAACAATACTTATTAATCTAGTTAGCAGGACATGTTAATATTTAAGTAATAATAATGATGATGTGTAAAAAGTTTAATACATTATGTTTCAAAAAAAAAAAAAACATTATTAATATACATGTAAATATACCAAATATAAAGAAAACTTTTGCAAACATGAGCTTAGCTCAATTGGCATAAATCTTGTATACTTATGATGACCAAGAGGTATGTGGTTCGAGTTATTTAAAAGTAAAAATATCACCTTTAACTCTAAGAAAAATATAAAAGAAAACTTTTTGGATATCATACCTTCTCAAATAGTAAATAAATAAAGTTATTTAAATAATAAATTACAAATGTTTATTTTAATAATAATATTAATAACAACAAAACACCGATCAATTTGATTTTTTTTTTTTTTTTACAACATGTAGGGTGGGGGATTAAACCTCCGACCACTTGTCGGGATATAAGCTTTATGCCGATTGAGTCATGCTCTTGTTGGCAATCACCCATCAATTTGTTAACAGTAATTAATTGTTTTTTTTTAATTTTATTCAAATTAACAGAATTAATGTTTATTGAGATACCAACTGAGATTATTAATATAACATTTTCATAATATATATATATATATATATATATTAGTTGAATAGGGGTTGGAGGATTGGAACCTCCAACCTTTTAGGAAATAAAGTAATGTCTTGACTTGTTTGTTTGTTTTTTGTTTTTTTTTGTTTTTCTTTAAATAGTGTCTTTACTAGTTAAAACTAGGGCAAAATGCACTTTTGGTCCCTGAGGTTTGGGGTTCATGTCTATTTGGTCCCTGAAGTTTCAAAAGATACACTTTAGTCTTCCAGGTTTGTAAAACCATTTTAAATGGTCCCTGACTTAACTTTGACTTAATGGAATGCTGACTAGACCGTTATGTACTGACATGAATGGGATGATGTGGCTATTTCATTTGATTACTAGGCAAATAAATTGAAAAATTAATTGAGAAAACTAAAATATTAAACATGTTAAAAATGGTTTAAAGCATATTAAGATATAAAAAATCCCTTCACGTGCCCTAATCCACACCTTCTTCTCCCATAAAAATCAACGTTGTCGTTCAGAGTTGGACGGAGACACCCCAATCACTGTAAAGTAATAGTGAGAAAATTAGTCAAAAACCCAAATAAGAAATTTCATCTGAAAGGCCCTTCCTCAAGACTGTTACTGTGGAGCCGTCGAAACGAGGATCAAAATTGTTACTGTGATGTGTATGCAGACCTTCACCAAATAGCATTTGTCGCCCAACCATCCACTTTCTCGATTCATCGCCGATCATCTTCCATTAAAGTCACCGTCGCACCTCCCACGACCCCGGAAACCCCCTTCCGACAGTCAAGTCGCCACCGTGCTACGCGACCGTCGTGGAGCATAACGTGATTGTTGAGAGGAAATTGGATCGGGTTCTGTATTTGCGTTAAGAAATTGTGAAATCGAAGATAAAGAAGGGAGGAAGATTGATTTATTGTGGGTTTATTCAGTATTATTTGCGTTCAAGAAATTGGATCAGGGAATTGAATGTATTGTGGGTTTTGTGGGGTATATTTGCGAGGTTCCTGAGTCGTTGCATCTTCAAAAGAATGATTTTATATTTTAATATGTTTTAAACGATTTTTTATTTAATATTTTAGTTTTCTTGATTAATTTCTCAATTTATTTTCCTATTAATCAAATGAAATAGCCACGTCATCCCATCCATGTCAGTATATAACGGTCTAGTCAGCATTCCGTTAAGTCAAAGTTAAGTTAGGGACCATTTAGAATGGTTTTACAAACCTGGTGGACTAAAGTGTATCTTTTGAAACTTCAGGGACCAAATAGACATGAATCCCAAACCTCAGGGACCAAAAGTGCATTTTGCCCTTAAAACTATAATCACGTTTGTATTTTATTTTTATATTTTCTAAACTCGTCTTTAAATAACAAAATTTATTGTATTTTGATTTGTAAACATATTTTCTTCATACTATAGATTGATGGCTGAATCCTAAAACAAGCCATTGTTGAATTTAAATATATATATATATATATATATTAAATAAATGTGTATAGGCACATTTTATGTACTAACTTTTCAACAAATAAATTCTTTTGCAGAGTAAAATTCTACTATGTAGATGTAAATACGGTCCCTCAATCTCTAGTAAAACGTGGCAACATCTCTGTAAGTAAATATTCAACAAATCCTTTTGAGGTTCTTGAAATCTTTCCATTTTTTGGTTTGACCAATTATTATTATTATTTTTCTTTTATTGTGCAGAAAATGCCTACAATTCAGGTGACCACTTTTGATTTCATTCTCTCATGTCGGGTGTTTTTGAGATTGCTTCTAGATTAATTGTGACTTTGAGATGAATTTTAGGAAAAAAGTGCTTTTTAGGTAAGAACTCCTGGAAGGAAATTGTGTGTTTTTTCTGAAAATATCTTGAAGTACTTTTTAGTTTTTAGGAGTGCGTTTAGAATGCTTTTAAAATAAGTACTTTATTCATAAGCTCTTATATTAAAAATGAATAACGAAAGACTGAGTGGACAATTTTCGTTAAATGCCTTAATTTTTTAATAAGTTCTAAAATTATGTTTCAATTCTCTTAATTCTTAAAAAAAAAAAAAAATTCCAAAGACTTGGTTGGTTAACTACTTGGTGAGAAGTGTTTTTTGCCTATGCTGAAAGCATAGCTCGAGTGTTTTTGAAATTCTTTTTTAAATCTTTCTTTTTCTTTTATCTAACTAAATCCTTCTATGAACTTTTAAAAACATTCTTTCCCATTCAAAGTTATCTCAAACTCATCTTTGAGTGATTTTAGTAAAAAAGTACTTTGATTTCAAGCATTTTATTAGAAAGTATTTAATGACAAGTGGCTTTCATGTAATGGTTTTACATTCTTGAAGCTGCTTTTGAAGTGGTTTTTGGCAACGAAGGAATCTACTATTCCTATATATAATTCTTTCGAGAGAATTAGTTTTGCGTTTTGCTAAGTACTCCCAAACATACCCGTAGCTTTCTAGCTTTCAATTTTTGAACGAATGAGTTGTTGGTAACGTTTCAAAATTACGTTTTAGCTTTGGAAAGATGGAGAAATGAAAGCAGAAGTGATTGGAGGACACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCGAAAAGTTTGTTTCATGATTCAGTTCCAAAAGGAATATAGAGAAACTTTGGTGATTTTCTTTTATATGCGATTATCTTTGTAATTTTAATGTACATATATAAGAGAGTTGACCTTGATGAAAATATTCAAATATGCAAATATTAACAAATATTGAATCTTGAGTCCCTTC

mRNA sequence

ACGCTCCATTCCTCTTCTCTCTCATTTCAAATCCCAAACCCCCAAAAAGAAAAAAAAGAAAAAAAAAAAAAAAAAAAATCTTCCTTCACAAACCAAAACCATGAGCCCCTAAAACGTACACCTAGAAAAAAGATACAGAGAGGATATAGAGATGTCTGTTTTGGCTGCAAGTGGTTCTCAGATTCTGTACAGAGAAGTTCATGAACACCAAATACTCCGTAATGGGAGGCTCTGTTTTGTGAATCGTGATTTTGGATCTCTTTTGTTTGGGCGGAGAAATGGAGCGCGGCGGAGGGAGTTGAAGCTGAGGGCGGAGGCTGGGTTTTGGCCGGATTTGTCGCGGCCGTCGCTGGTGGAGATGGAGTCCATTGATGATTCCGATCACCTCGATCGGATTTTGCTTCACGCCCACGACTTATCTCAGCCCGTTCTCATCGATTGGATGGCAACTTGGTGTAGGAAATGCATCTATTTGAAGCCAAAACTGGAGAAACTTGCTGCTGACTATGTTACCAAAGTAAAATTCTACTATGTAGATGTAAATACGGTCCCTCAATCTCTAGTAAAACGTGGCAACATCTCTAAAATGCCTACAATTCAGCTTTGGAAAGATGGAGAAATGAAAGCAGAAGTGATTGGAGGACACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCGAAAAGTTTGTTTCATGATTCAGTTCCAAAAGGAATATAGAGAAACTTTGGTGATTTTCTTTTATATGCGATTATCTTTGTAATTTTAATGTACATATATAAGAGAGTTGACCTTGATGAAAATATTCAAATATGCAAATATTAACAAATATTGAATCTTGAGTCCCTTC

Coding sequence (CDS)

ATGTCTGTTTTGGCTGCAAGTGGTTCTCAGATTCTGTACAGAGAAGTTCATGAACACCAAATACTCCGTAATGGGAGGCTCTGTTTTGTGAATCGTGATTTTGGATCTCTTTTGTTTGGGCGGAGAAATGGAGCGCGGCGGAGGGAGTTGAAGCTGAGGGCGGAGGCTGGGTTTTGGCCGGATTTGTCGCGGCCGTCGCTGGTGGAGATGGAGTCCATTGATGATTCCGATCACCTCGATCGGATTTTGCTTCACGCCCACGACTTATCTCAGCCCGTTCTCATCGATTGGATGGCAACTTGGTGTAGGAAATGCATCTATTTGAAGCCAAAACTGGAGAAACTTGCTGCTGACTATGTTACCAAAGTAAAATTCTACTATGTAGATGTAAATACGGTCCCTCAATCTCTAGTAAAACGTGGCAACATCTCTAAAATGCCTACAATTCAGCTTTGGAAAGATGGAGAAATGAAAGCAGAAGTGATTGGAGGACACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCGAAAAGTTTGTTTCATGA

Protein sequence

MSVLAASGSQILYREVHEHQILRNGRLCFVNRDFGSLLFGRRNGARRRELKLRAEAGFWPDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIEKFVS

Homology

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BLAST of Lcy04g002530 vs. ExPASy Swiss-Prot
Match: Q9FG36 (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 201.8 bits (512), Expect = 6.5e-51
Identity = 104/183 (56.83%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 6   ASGSQILYREVH---EHQILRNGRLCFVNRDFG---SLLFGRRNGARRRELKLRAEAGFW 65
           AS  Q+L R+ H   + Q+ R   L  + +  G   S+    + G    E + R +A FW
Sbjct: 30  ASNPQMLTRQAHGNKKEQLWRKESL-NLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA-FW 89

Query: 66  PDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLEKLAADY 125
            ++++P+ +EME I++ + LD +L HA  LSQP++I+WMA+WCRKCIYLKPKLEKLAA+Y
Sbjct: 90  SNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEY 149

Query: 126 VTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIE 183
             + KFYYVDVN VPQ+LVKRGNISKMPTIQLWK+ EMK EVIGGHK WLVIEEVRE+I 
Sbjct: 150 NNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELIN 209

[Close]

BLAST of Lcy04g002530 vs. ExPASy Swiss-Prot
Match: Q6Z7L3 (Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0774100 PE=3 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 5.9e-44
Identity = 89/141 (63.12%), Postives = 111/141 (78.72%), Query Frame = 0


Query: 40  GRRNGARRRELKLRAEAGFWPDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMA 99
           G+     R +  LRAEA FW D+S+P  VEME ID  + LD  L  + +  QP++IDWMA
Sbjct: 55  GKGRRRERGDGMLRAEAYFW-DVSKP--VEMEEIDSMEKLDDALRWSVENKQPIIIDWMA 114

Query: 100 TWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKA 159
           +WCRKCIYLKP+LEK+A ++   V+FY+VDVN VPQ++VKRGNI+KMPTIQLWKDGE  A
Sbjct: 115 SWCRKCIYLKPRLEKIAGEF-PGVRFYFVDVNKVPQTVVKRGNITKMPTIQLWKDGEWAA 174

Query: 160 EVIGGHKAWLVIEEVREMIEK 181
           EVIGGHKAWLV++EVREMI+K
Sbjct: 175 EVIGGHKAWLVMDEVREMIQK 191

[Close]

BLAST of Lcy04g002530 vs. ExPASy Swiss-Prot
Match: Q8VZT6 (Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.0e-35
Identity = 72/135 (53.33%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 46  RRRELKLRAEAGFWPDL-SRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRK 105
           R R + ++ + G   +L   P  VE+  I    H D+++  A  L + V+I WMA WCRK
Sbjct: 53  RIRAVDIQKQDGGLQELDDSPVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRK 112

Query: 106 CIYLKPKLEKLAADYVTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGG 165
           CIYLKPKLEKLAA++  +++FY+VDVN VP  LV R  ++KMPTIQLW+DG+ +AEVIGG
Sbjct: 113 CIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGG 172

Query: 166 HKAWLVIEEVREMIE 180
           HKA  V+ EVREMIE
Sbjct: 173 HKAHFVVNEVREMIE 187

[Close]

BLAST of Lcy04g002530 vs. ExPASy Swiss-Prot
Match: Q9SEU6 (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 3.6e-09
Identity = 35/115 (30.43%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 68  VEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 127
           VE+ ++ DS+   ++L    +   PVL+++ A WC  C  + P +++LA D+  K KFY 
Sbjct: 86  VEVPNLSDSEWQTKVL----ESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYK 145

Query: 128 VDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIEKFV 183
           ++ +  P +   R  I  +PT+ ++K GE K  +IG     +  E + + IE+F+
Sbjct: 146 INTDESPNT-ANRYGIRSVPTVIIFKGGEKKDSIIGA----VPRETLEKTIERFL 191

[Close]

BLAST of Lcy04g002530 vs. ExPASy Swiss-Prot
Match: P34723 (Thioredoxin OS=Penicillium chrysogenum OX=5076 GN=TRXA PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.2e-09
Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 88  DLSQPVLIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNTVPQSLVKRGNISKMP 147
           D + PV++D+ ATWC  C  + P LEKL+  + T ++FY VDV+ + +     G +S MP
Sbjct: 18  DATGPVVVDFHATWCGPCKAIAPALEKLSETH-TGIQFYKVDVDELSEVAASNG-VSAMP 77

Query: 148 TIQLWKDGEMKAEVIGGHKA 168
           T   +K GE   EV G + A
Sbjct: 78  TFHFYKGGERNEEVKGANPA 95

[Close]

BLAST of Lcy04g002530 vs. ExPASy TrEMBL
Match: A0A6J1EDU4 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432326 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.8e-81
Identity = 156/189 (82.54%), Postives = 168/189 (88.89%), Query Frame = 0


Query: 1   MSVLAASGSQILYREVH--EHQILRN-GRLCFVNRDFGSLLFGRRNG----ARRRELKLR 60
           MSVLAA+ +QILY E H  +HQI  N GR CFVNRDFGS+LFGRRNG     RRRELK+ 
Sbjct: 1   MSVLAATTAQILYSEAHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 61  AEAGFWPDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLE 120
            EAGFWPDLSRP++VEMESI+DS+ LDRIL HA +LSQPVLIDWMATWCRKCIYLKPKLE
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 121 KLAADYVTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180
           KLAADY+TKVKFYYVDVN VPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

Query: 181 VREMIEKFV 183
           VREMI KF+
Sbjct: 181 VREMIHKFI 189

[Close]

BLAST of Lcy04g002530 vs. ExPASy TrEMBL
Match: A0A6J1HTV8 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.7e-81
Identity = 155/189 (82.01%), Postives = 167/189 (88.36%), Query Frame = 0


Query: 1   MSVLAASGSQILYREVH--EHQILRNG-RLCFVNRDFGSLLFGRRNG----ARRRELKLR 60
           MSVLAAS +QILY EVH  +HQI  NG R CFVNRDFGS+LFGRRNG     RRRE ++ 
Sbjct: 1   MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 60

Query: 61  AEAGFWPDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLE 120
            EAGFWPDLSRP++VEMESI+DS+ LDRIL HA +LSQPVLIDWMATWCRKCIYLKPKLE
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 121 KLAADYVTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180
           KL ADY+TKVKFYYVDVN VPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

Query: 181 VREMIEKFV 183
           VREMI KF+
Sbjct: 181 VREMIHKFI 189

[Close]

BLAST of Lcy04g002530 vs. ExPASy TrEMBL
Match: A0A1S3B504 (thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.2e-77
Identity = 146/184 (79.35%), Postives = 158/184 (85.87%), Query Frame = 0


Query: 1   MSVLAASGSQILYREVHEHQILRNGRLC-FVNRDFGSLLFGRRNGARRRELKLRAEAGFW 60
           M VL AS S ILY ++H+HQ L NG+ C F+N DFG          RRREL+++AEAGFW
Sbjct: 1   MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGD--------HRRRELRIKAEAGFW 60

Query: 61  PDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLEKLAADY 120
           PDLSRP+ VEMESIDDSD LDRIL+HA  LSQP+LIDWMATWCRKCIYLKPKLEKLAADY
Sbjct: 61  PDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADY 120

Query: 121 VTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIE 180
           VTKVKFYYVDVN VPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI+
Sbjct: 121 VTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQ 176

Query: 181 KFVS 184
           KF S
Sbjct: 181 KFAS 176

[Close]

BLAST of Lcy04g002530 vs. ExPASy TrEMBL
Match: A0A0A0KZ53 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G496780 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.8e-75
Identity = 143/184 (77.72%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 1   MSVLAASGSQILYREVHEHQILRNGRLC-FVNRDFGSLLFGRRNGARRRELKLRAEAGFW 60
           MSVL AS S ILY  +H+H  L N + C F++ DFG          RRREL+++AEAGFW
Sbjct: 1   MSVLGASTSHILYPPLHQHHFLTNAKRCSFLSTDFGD--------HRRRELRIKAEAGFW 60

Query: 61  PDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLEKLAADY 120
           PDLSRP+ VEMESIDDSD LDRIL+HA  LSQP+LIDWMATWCRKCIYLKPKLEKLAADY
Sbjct: 61  PDLSRPASVEMESIDDSDQLDRILIHAQHLSQPILIDWMATWCRKCIYLKPKLEKLAADY 120

Query: 121 VTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIE 180
           VTK KFYYVDVN VPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI+
Sbjct: 121 VTKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQ 176

Query: 181 KFVS 184
           KF S
Sbjct: 181 KFAS 176

[Close]

BLAST of Lcy04g002530 vs. ExPASy TrEMBL
Match: A0A6J1E1K1 (thioredoxin-like 3-1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025584 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72
Identity = 150/188 (79.79%), Postives = 156/188 (82.98%), Query Frame = 0


Query: 1   MSVLAASGSQILYREVHE---HQILR--NGRLCFVNRDFGSLLFGRRNGARRRELKLRAE 60
           MS+LAAS SQI+YREVH     QI    +G  CFVN + GS LF RR   RRRE  LRAE
Sbjct: 1   MSILAAS-SQIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQDRRRE--LRAE 60

Query: 61  AGFWPDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLEKL 120
           AGFWPDLSRP+  EM  I DSDHLDRILL A D SQPVLIDWMATWCRKCIYLKPKLEKL
Sbjct: 61  AGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPKLEKL 120

Query: 121 AADYVTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVR 180
           AADYV K KFYYVDVN VPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVR
Sbjct: 121 AADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVR 180

Query: 181 EMIEKFVS 184
           EMI+KFVS
Sbjct: 181 EMIQKFVS 185

[Close]

BLAST of Lcy04g002530 vs. NCBI nr
Match: KAG6595600.1 (Thioredoxin-like 3-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312.8 bits (800), Expect = 2.0e-81
Identity = 157/189 (83.07%), Postives = 169/189 (89.42%), Query Frame = 0


Query: 1   MSVLAASGSQILYREVH--EHQILRN-GRLCFVNRDFGSLLFGRRNG----ARRRELKLR 60
           MSVLAA+ +QILY EVH  +HQI  N GR CFVNRDFGS+LFGRRNG     RRRELK+ 
Sbjct: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 61  AEAGFWPDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLE 120
            EAGFWPDLSRP++VEMESI+DS+ LDRIL HA +LSQPVLIDWMATWCRKCIYLKPKLE
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 121 KLAADYVTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180
           KLAADY+TKVKFYYVDVN VPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

Query: 181 VREMIEKFV 183
           VREMI KF+
Sbjct: 181 VREMIHKFI 189

[Close]

BLAST of Lcy04g002530 vs. NCBI nr
Match: XP_038883417.1 (thioredoxin-like 3-1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 312.8 bits (800), Expect = 2.0e-81
Identity = 150/183 (81.97%), Postives = 164/183 (89.62%), Query Frame = 0


Query: 1   MSVLAASGSQILYREVHEHQILRNGRLCFVNRDFGSLLFGRRNGARRRELKLRAEAGFWP 60
           MSVL A+ SQILYR++H+HQIL  G+ CF+N DFG L        RRREL+++AEAGFWP
Sbjct: 1   MSVLGANSSQILYRQLHQHQILSTGKRCFLNTDFGLL-----GDQRRRELRIKAEAGFWP 60

Query: 61  DLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLEKLAADYV 120
           DLSRP+ VEMESIDDSDHLDRIL+H+  LSQP+LIDWMATWCRKCIYLKPKLEKLAADYV
Sbjct: 61  DLSRPAAVEMESIDDSDHLDRILIHSQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYV 120

Query: 121 TKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIEK 180
           TKVKFYYVDVN VPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI+K
Sbjct: 121 TKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQK 178

Query: 181 FVS 184
           FVS
Sbjct: 181 FVS 178

[Close]

BLAST of Lcy04g002530 vs. NCBI nr
Match: XP_022924923.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 311.2 bits (796), Expect = 5.8e-81
Identity = 156/189 (82.54%), Postives = 168/189 (88.89%), Query Frame = 0


Query: 1   MSVLAASGSQILYREVH--EHQILRN-GRLCFVNRDFGSLLFGRRNG----ARRRELKLR 60
           MSVLAA+ +QILY E H  +HQI  N GR CFVNRDFGS+LFGRRNG     RRRELK+ 
Sbjct: 1   MSVLAATTAQILYSEAHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 61  AEAGFWPDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLE 120
            EAGFWPDLSRP++VEMESI+DS+ LDRIL HA +LSQPVLIDWMATWCRKCIYLKPKLE
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 121 KLAADYVTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180
           KLAADY+TKVKFYYVDVN VPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

Query: 181 VREMIEKFV 183
           VREMI KF+
Sbjct: 181 VREMIHKFI 189

[Close]

BLAST of Lcy04g002530 vs. NCBI nr
Match: XP_022966464.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 310.8 bits (795), Expect = 7.6e-81
Identity = 155/189 (82.01%), Postives = 167/189 (88.36%), Query Frame = 0


Query: 1   MSVLAASGSQILYREVH--EHQILRNG-RLCFVNRDFGSLLFGRRNG----ARRRELKLR 60
           MSVLAAS +QILY EVH  +HQI  NG R CFVNRDFGS+LFGRRNG     RRRE ++ 
Sbjct: 1   MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 60

Query: 61  AEAGFWPDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLE 120
            EAGFWPDLSRP++VEMESI+DS+ LDRIL HA +LSQPVLIDWMATWCRKCIYLKPKLE
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 121 KLAADYVTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180
           KL ADY+TKVKFYYVDVN VPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

Query: 181 VREMIEKFV 183
           VREMI KF+
Sbjct: 181 VREMIHKFI 189

[Close]

BLAST of Lcy04g002530 vs. NCBI nr
Match: XP_023517975.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.9 bits (790), Expect = 2.9e-80
Identity = 154/189 (81.48%), Postives = 168/189 (88.89%), Query Frame = 0


Query: 1   MSVLAASGSQILYREVH--EHQILRN-GRLCFVNRDFGSLLFGRRNG----ARRRELKLR 60
           MSVLAA+ +QILY EVH  +HQI  N GR CFVNRDFGS+LFGRRNG     RRRE ++ 
Sbjct: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG 60

Query: 61  AEAGFWPDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLE 120
            EAGFWPDLSRP++VEMESI+DS+ LDRIL HA +LSQPVLIDWMATWCRKCIYLKPKLE
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 121 KLAADYVTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180
           KLAADY+TK KFYYVDVN VPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYLTKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

Query: 181 VREMIEKFV 183
           V+EMI+KFV
Sbjct: 181 VKEMIQKFV 189

[Close]

BLAST of Lcy04g002530 vs. TAIR 10
Match: AT5G06690.1 (WCRKC thioredoxin 1 )

HSP 1 Score: 201.8 bits (512), Expect = 4.6e-52
Identity = 104/183 (56.83%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 6   ASGSQILYREVH---EHQILRNGRLCFVNRDFG---SLLFGRRNGARRRELKLRAEAGFW 65
           AS  Q+L R+ H   + Q+ R   L  + +  G   S+    + G    E + R +A FW
Sbjct: 30  ASNPQMLTRQAHGNKKEQLWRKESL-NLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA-FW 89

Query: 66  PDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLEKLAADY 125
            ++++P+ +EME I++ + LD +L HA  LSQP++I+WMA+WCRKCIYLKPKLEKLAA+Y
Sbjct: 90  SNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEY 149

Query: 126 VTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIE 183
             + KFYYVDVN VPQ+LVKRGNISKMPTIQLWK+ EMK EVIGGHK WLVIEEVRE+I 
Sbjct: 150 NNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELIN 209

[Close]

BLAST of Lcy04g002530 vs. TAIR 10
Match: AT5G04260.1 (WCRKC thioredoxin 2 )

HSP 1 Score: 149.1 bits (375), Expect = 3.6e-36
Identity = 72/135 (53.33%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 46  RRRELKLRAEAGFWPDL-SRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRK 105
           R R + ++ + G   +L   P  VE+  I    H D+++  A  L + V+I WMA WCRK
Sbjct: 53  RIRAVDIQKQDGGLQELDDSPVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRK 112

Query: 106 CIYLKPKLEKLAADYVTKVKFYYVDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGG 165
           CIYLKPKLEKLAA++  +++FY+VDVN VP  LV R  ++KMPTIQLW+DG+ +AEVIGG
Sbjct: 113 CIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGG 172

Query: 166 HKAWLVIEEVREMIE 180
           HKA  V+ EVREMIE
Sbjct: 173 HKAHFVVNEVREMIE 187

[Close]

BLAST of Lcy04g002530 vs. TAIR 10
Match: AT5G06690.2 (WCRKC thioredoxin 1 )

HSP 1 Score: 136.0 bits (341), Expect = 3.1e-32
Identity = 72/145 (49.66%), Postives = 99/145 (68.28%), Query Frame = 0


Query: 6   ASGSQILYREVH---EHQILRNGRLCFVNRDFG---SLLFGRRNGARRRELKLRAEAGFW 65
           AS  Q+L R+ H   + Q+ R   L  + +  G   S+    + G    E + R +A FW
Sbjct: 30  ASNPQMLTRQAHGNKKEQLWRKESL-NLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA-FW 89

Query: 66  PDLSRPSLVEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLEKLAADY 125
            ++++P+ +EME I++ + LD +L HA  LSQP++I+WMA+WCRKCIYLKPKLEKLAA+Y
Sbjct: 90  SNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEY 149

Query: 126 VTKVKFYYVDVNTVPQSLVKRGNIS 145
             + KFYYVDVN VPQ+LVKRGNIS
Sbjct: 150 NNRAKFYYVDVNKVPQTLVKRGNIS 172

[Close]

BLAST of Lcy04g002530 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 63.2 bits (152), Expect = 2.6e-10
Identity = 35/115 (30.43%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 68  VEMESIDDSDHLDRILLHAHDLSQPVLIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 127
           VE+ ++ DS+   ++L    +   PVL+++ A WC  C  + P +++LA D+  K KFY 
Sbjct: 86  VEVPNLSDSEWQTKVL----ESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYK 145

Query: 128 VDVNTVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIEKFV 183
           ++ +  P +   R  I  +PT+ ++K GE K  +IG     +  E + + IE+F+
Sbjct: 146 INTDESPNT-ANRYGIRSVPTVIIFKGGEKKDSIIGA----VPRETLEKTIERFL 191

[Close]

BLAST of Lcy04g002530 vs. TAIR 10
Match: AT1G76760.1 (thioredoxin Y1 )

HSP 1 Score: 52.0 bits (123), Expect = 5.9e-07
Identity = 26/89 (29.21%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 91  QPVLIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNTVPQSLVKRGNISKMPTIQ 150
           +PVL+D+ ATWC  C ++ P L +++     K++   +D    P S+  +  I  +PT  
Sbjct: 82  KPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYP-SIANKYKIEALPTFI 141

Query: 151 LWKDGEMKAEVIGGHKAWLVIEEVREMIE 180
           L+KDGE      G   A  +I+ + + ++
Sbjct: 142 LFKDGEPCDRFEGALTAKQLIQRIEDSLK 169

The following BLAST results are available for this feature:

BLAST of Lcy04g002530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FG36	6.5e-51	56.83	Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE...	[more]
Q6Z7L3	5.9e-44	63.12	Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q8VZT6	5.0e-35	53.33	Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE...	[more]
Q9SEU6	3.6e-09	30.43	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 ...	[more]
P34723	6.2e-09	40.00	Thioredoxin OS=Penicillium chrysogenum OX=5076 GN=TRXA PE=1 SV=1	[more]

BLAST of Lcy04g002530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EDU4	2.8e-81	82.54	thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11143232...	[more]
A0A6J1HTV8	3.7e-81	82.01	thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 ...	[more]
A0A1S3B504	3.2e-77	79.35	thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4...	[more]
A0A0A0KZ53	8.8e-75	77.72	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G496780...	[more]
A0A6J1E1K1	1.1e-72	79.79	thioredoxin-like 3-1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110255...	[more]

BLAST of Lcy04g002530 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595600.1	2.0e-81	83.07	Thioredoxin-like 3-1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_038883417.1	2.0e-81	81.97	thioredoxin-like 3-1, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_022924923.1	5.8e-81	82.54	thioredoxin-like 3-1, chloroplastic [Cucurbita moschata]	[more]
XP_022966464.1	7.6e-81	82.01	thioredoxin-like 3-1, chloroplastic [Cucurbita maxima]	[more]
XP_023517975.1	2.9e-80	81.48	thioredoxin-like 3-1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy04g002530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06690.1	4.6e-52	56.83	WCRKC thioredoxin 1	[more]
AT5G04260.1	3.6e-36	53.33	WCRKC thioredoxin 2	[more]
AT5G06690.2	3.1e-32	49.66	WCRKC thioredoxin 1	[more]
AT3G15360.1	2.6e-10	30.43	thioredoxin M-type 4	[more]
AT1G76760.1	5.9e-07	29.21	thioredoxin Y1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 90..167 e-value: 7.3E-17 score: 61.3
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 53..183 score: 10.71483
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 67..181 e-value: 1.5E-20 score: 75.0
None	No IPR available	PANTHER	PTHR47192:SF3	THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC	coord: 1..182
None	No IPR available	CDD	cd02947	TRX_family	coord: 90..179 e-value: 1.47354E-21 score: 82.2208
IPR044253	Thioredoxin-like 3-1/3-2	PANTHER	PTHR47192	THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC	coord: 1..182
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 71..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g002530.1	Lcy04g002530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma