Lcy04g001430 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g001430
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr04: 7116827 .. 7117417 (-)
RNA-Seq Expression	Lcy04g001430
Synteny	Lcy04g001430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAATAATGAACAGAATGTTTCTAAGGCTTTAAGGAAGAATTATGAATCTTTTCCTCTTCATTATTCTCGAAGGAAATATGAAAAGTCAAAAATATTGGACTCAATTCCCATTAATTCCAATTATAACCCTGATGTTATTGAAGAATCTTGTTCATTTTTGCCCCCTGCTTTGAATCAACCTAGGTGCTGTCAATCTAATCTTAAAGAGTCATCAAATTCCACATCATCCAATCAATACATTCTTTCAAACATTCAATCTAACCCTTCTTTATCAAAGGGAGTTTTTATTCCTTCATCCAAAGTTGAAAGCAAAGTTGATCAATCATATTTATCTCCTATTGATTCTGATGATGATTCAGTGGTGAGTATTAGTAGTGTTGAAGCTGAAAATCAGTATTTGAATGATGAAAGCAATGATTTATTGGAGGAAGACTCTTTTGCACTGGCTTTTAATCGGATTTTCCAGCATGACAAAAAAGTTTCTGAAGTTCAGTTGAATGCTTGTGATATTTTGGCAACACCCTTAGTTTCTGTTCCAAGCAAATTTTCATCTCTTTTAGAAGATTGTGACAAGACATTCAGTTGA

mRNA sequence

ATGGTAAATAATGAACAGAATGTTTCTAAGGCTTTAAGGAAGAATTATGAATCTTTTCCTCTTCATTATTCTCGAAGGAAATATGAAAAGTCAAAAATATTGGACTCAATTCCCATTAATTCCAATTATAACCCTGATGTTATTGAAGAATCTTGTTCATTTTTGCCCCCTGCTTTGAATCAACCTAGGTGCTGTCAATCTAATCTTAAAGAGTCATCAAATTCCACATCATCCAATCAATACATTCTTTCAAACATTCAATCTAACCCTTCTTTATCAAAGGGAGTTTTTATTCCTTCATCCAAAGTTGAAAGCAAAGTTGATCAATCATATTTATCTCCTATTGATTCTGATGATGATTCAGTGGTGAGTATTAGTAGTGTTGAAGCTGAAAATCAGTATTTGAATGATGAAAGCAATGATTTATTGGAGGAAGACTCTTTTGCACTGGCTTTTAATCGGATTTTCCAGCATGACAAAAAAGTTTCTGAAGTTCAGTTGAATGCTTGTGATATTTTGGCAACACCCTTAGTTTCTGTTCCAAGCAAATTTTCATCTCTTTTAGAAGATTGTGACAAGACATTCAGTTGA

Coding sequence (CDS)

ATGGTAAATAATGAACAGAATGTTTCTAAGGCTTTAAGGAAGAATTATGAATCTTTTCCTCTTCATTATTCTCGAAGGAAATATGAAAAGTCAAAAATATTGGACTCAATTCCCATTAATTCCAATTATAACCCTGATGTTATTGAAGAATCTTGTTCATTTTTGCCCCCTGCTTTGAATCAACCTAGGTGCTGTCAATCTAATCTTAAAGAGTCATCAAATTCCACATCATCCAATCAATACATTCTTTCAAACATTCAATCTAACCCTTCTTTATCAAAGGGAGTTTTTATTCCTTCATCCAAAGTTGAAAGCAAAGTTGATCAATCATATTTATCTCCTATTGATTCTGATGATGATTCAGTGGTGAGTATTAGTAGTGTTGAAGCTGAAAATCAGTATTTGAATGATGAAAGCAATGATTTATTGGAGGAAGACTCTTTTGCACTGGCTTTTAATCGGATTTTCCAGCATGACAAAAAAGTTTCTGAAGTTCAGTTGAATGCTTGTGATATTTTGGCAACACCCTTAGTTTCTGTTCCAAGCAAATTTTCATCTCTTTTAGAAGATTGTGACAAGACATTCAGTTGA

Protein sequence

MVNNEQNVSKALRKNYESFPLHYSRRKYEKSKILDSIPINSNYNPDVIEESCSFLPPALNQPRCCQSNLKESSNSTSSNQYILSNIQSNPSLSKGVFIPSSKVESKVDQSYLSPIDSDDDSVVSISSVEAENQYLNDESNDLLEEDSFALAFNRIFQHDKKVSEVQLNACDILATPLVSVPSKFSSLLEDCDKTFS

Homology

The following BLAST results are available for this feature:

BLAST of Lcy04g001430 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g001430 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g001430 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g001430 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 125..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g001430.1	Lcy04g001430.1	mRNA