Lcy04g001420 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g001420
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ribonuclease H
Location	Chr04: 7091329 .. 7096097 (-)
RNA-Seq Expression	Lcy04g001420
Synteny	Lcy04g001420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAAAAGGTCTAGGAGACACGCTGCCTCTTCCTCCTCCTCCTCTCCCCCTTTTGACCCAGATAGGTTCATTAGTGGTGAAGCCTCAGCGAGATTTGACAAATATGTGGAGAGTAGGAACTTTATTCCTGAGCATGGTTTCAGCCATGACCCCGAGATGCAACCAAACCTAGTGAACAACATTGTTGCGCGGGGTTGGGGTGACTTTGTTCATCATCCTGCACCCGGGGTAGCGTCTATAGTGAGGGAGTTCTATGCCAACATGGAAGACTCTTCTTCCTCATCCTTTGTTCGAGGACACCGTGTCCCCTACGACTCCCTCACCATCAATAGGTTTTATGGGCTGCCCGACTTTGAGAGGGATGAATATAGTACCTACCTACATAGCCACTTGGACGTTAACGAGGTCATTCAGACAGTTTGTAGGCCAGGGGCCGAATGGGTTATGACAGGAGCAGAGGTGGTGAGATTCAAGACCACCGATCTGTTTGTAGACTACAGGGCGTGGCACACTTTCCTCTGCGCCAAGTTGATGCCTGTGGCGCATCTAAGCGACGTTACCAAGAGTCGTGCCATCCTGCTTTTCGCTATCGCCACAGGTCGCTCAGTAAATGTCGGCCAAGTCATCCATCAGTCCATGCGTCACATCCGCCGACGTTACACGACAGTAGGGCTCGGTCATCCTTCACTGATCACAGCCCTTTGCCGAGCCGTTGGTGTCGTTTGGGACGCCCAGGAGGAGCTGGTCCACCCCGGAGTGATCATTGACAGGAATTTCATCAGTCGATACCGAGGGCCTGGACCACAGAGTGCACAACCAGCTCTCCCTATCCATGCACCGCCACAGCATCCTGAGCAGCCCGCAGAGCCTGAGCAGCAGGAGCAGGAGGTTCCACCTCCCACCATCGAGGAGCAGCTGCAGCAGCTGCGTATGGAGTTCCAGAGTCACCGGCTGGAGTTCCAGACTCTCCAGCAGGGGCTCCACAGTCAGCAGCGCGAGCACCAGAGAGAGAGGCATAGAGATCGTCGTCATTTCCTCTACTCTACGAGCATGCATGCCCACACCTATCAGTGTCAGGAGGCTATTAGTACGGGTCAGCCTTTACCGCCACCTTTACCACCGTACGAGTCGCCTGAGGACGAGGACGAGTGATGCTCTGCTGCCTTCCCTCTGCACACGGTTGTTTCTTTCCCTCTCTTTCTTATTTTTCATTGTATTTGTTCTCATATTGGTCTGTATATCTTATTATTTTACATTAAGGACAATGAAATTTTTAAGTTTGGGGGTGGAAAGTATTTACTTTTACTTTTGGTCTGTAATTATTATTTGTTATATTTCCTTTGACCATTTTTGGGTTTTCAGGCGTATTATTGTGATTTTATTGTGATTTTATTCAGGTTATCATTTTTGGATCATTATTTTTCTTTCCATTGAGATTTGGGTTGATTGTGTTATCTGTCTGAGATGTGTTTTCTTTGAGTGTGTTGTTTTGATTATGACAGCCGATGAGGATACCTAATTTTAGAAAACAGGTAAGTTATTCTTTGCAATAATAATTAAAAACAGGATTCAAGACAGGTTGATTTTATTTCATGAATCTTTTGCACCAATTGAGCACGTAGTCTCCTGTCTTAGTTTGGCAAGCTTAGAATAGGGTTATGTGATCTAGATCTTGTTGTCACCTCGAAAGGTTTAGGGACTGATTTGATGGTTAATCTGCATGATAGTTAGTAATGTTACACTTAGGAGAAAATGATGTCATATCTTGCATGTTAGTGAAAAAAGAAAAAAAATGATGAAAATGAATGAAAGAAAGAGAAGAAAAAAAAAATGATGATGAGTTGAATTAAGGTCAAAAAAGAGCTACCCCTGTTGTGATCAATTAGGCCAACCAGAGAAAACTCAGGTTAAGGGTCCCTGCAATAGGTGTGTGAAAGCTAGTGACCACCATTATTGATTGTGAAAAAAGCTCAAAGTTTGGGGGTTGTGTACCCCATTTAGGCACCCTAGTGGCATATTACCATCTTGAGTGTGGAGTGGCTTGATGATTGGGACTTAGGACCAGAGTAGGGGGAAAACGAGCGAAGGGTTGCATAAAACTGTTCCGGGCTTAAAGGATTGAGATAGGGAGGACTAGTCACACACACACGTGAGAGATGAATGAAATAAATGAGGCTTATCATGATGAATGTGTTTAATCATTAATGTTTCAGTGTGACTTATCTGTGATTTGGGATTCCTGAGGCAAGAGTCAATAGCAACACTCCCTCATGTATTTTTATTGACAGATTATTTTGATTCTTACTTTGCTTGATTCTTACTTTGCTCGGGACTAGCAAATGCTTAAGTTTGGGGGTATTTGATAGCGCAATTTATTGTGCTATATTTCATATGCTTTTACTGTTAGTCTCGGGCACTTTTTGGCCAATTTTATGTCTATTTGGTTTTGTTTTGTAGGAATCGAGCATTTCAATGGAATTCGACATTTTTTAGCATTACCGGTGATTTAGGAGCTAAAGAAGAAGGTTGGGCCAAGAAAACAGAAAAGGAAAATCAATTTTGGGCCTAGCGTTGAGACGCTAGCCCTTGGAGCGTCTCAATGCTCGGCATAAGTGAGCGCGCGCGTGAATTCGAGGCAGCGTCGAGACGCTACCTCCACAGCGTCTCGACACTGCGAACTTTCCAGATTTAATTAGGGCATGCGCGCGACAGCGTCGCGACGCTGTGTCCTCAGCGTCTCGACGCTGTCTCGCAGATTCAACAGTATATATATTTTGCGATGCTGCTGAGTTGGGGGAGCTATTTTGGAGAGAGAAACACGACTTCTAGAGAGAGAAAACGGACAGAACAGGGCAGAAACTGAAGGGGCTTGATTTTAGGAGCTTGGATCGAGAGGTTCGTGACGGGAACGCACGGGAATCACGGCCAACGAGTTTTAATCTTTCTCCCTATTTCTTGTACTGATTTTTAGCATGTTTGGGACTAATTTCGCTTGTACTGATTTTAGCATGTTTGGGACTATTTTAGAGACCATGTGTAGCTAGATTTCGTTTCTTAGGGGCTTGATGTAGCCATTAGTTTGTATGGATTAATTTACGGCTTTTTAGGACGTTTCGTAACGTGGTTTATTTATGCAATCGTATGCTTAGTGCTTATAATCCCTTGATCACGGATTGTATGATTTTCGTTTCTGAACTAATCGCTCGGGAGAGGGTAGTTTAGATTAGACTCTCAATTGCATAACTTAGGTAATTCTTTAATCGGGAGATTTGGGATTGCTTGAGAAACCGTCATGAGGATTGTTCTTATTGCTTATGCTTATTGTTGAAATTAGATAGGGATATCAATTTCTTAATTTGCATAAAGGATTAATTGTACTCGGGAGAGGCTTTTAATTATTCATAATCCTTGGTTTATAAATTTGTTACGAGTTTGTTCCTAATTATTCTTTAAATTAATTCATGCATCTAATAAGTGAAATCAATTCCCTAAGGCCTTTCTCCATTGAGTTTCCATATTTTATTGTTTTGATTAGTTTTTCATTGATTTGCATATCTCTCGTTTATTTTCTCTAAATAAAATTGGGCGAATATACCTTTAATAATTAGGGGAACTAGAAAACCAATCCAGAGGACGACATTCGATTTTAAATCACTATATTATAACTTGGGCCCGTACACTTGCGGTTAGCAATTTGCGTATCAATCAAGCACAGCGAATATAAGGTGATTGAACAGTTGCATCGCACACCAGCTCGCATATCCATATTGTCACTGTTCTTGAATTCAGAGCCACATCGTGAAGCTTTAATGGACGTTTTGAACCAAGCTCATGTGAATCATGACATCACCGTTGAAAAGTTGGGTGGAATTGTAGGGAACATCACTGCTTCCAACACTATTACTTTTACAGACGAGGAGATTCCACCAGAAGGTATGGGTCATACTAAAGCTCTGCACATAGTCGTAAAATGCAAGGATTATGCGATAGCTAAAGTCCTTGTTGATAATGGGACCTCCTTAAATGTGATGCCAATGTCCACACTATTAAAGCTACCTGTAGATCCATCCCATATTAAACACAGTAGCACTGTAGTAAGAGCTTTCGATGGGACTCGTAGAGAAGTCATGGGCGAAATCGAATTACCCATTAAAATTGGACCTCGCACCTTCAACGTGACATTTCAAGTGATGGACATAACTTCGACCTATAGTTGTCTATTGGGGAGGCCCTGGATTCATTCAGTTGGGGTTATTCCGTCAACTCTGCATCAACGATTAAAGTTTGTTTTCGAGAATACTATGGTGAGCATATTCAGCCAGGAAAATGTGCTGGTCACTAAATCTACTGCAACCCCTTATGTAGAGGCAAGAAAAGAAGGTTTGGAATGTTCTTTTCAATCTTTTGAGATCGCAAATGCTACTATTTTTACCCATGACGAGGATCGAAGTCTAGAACAGTCTTTGTCAAGAGCTTCAATGATGGTTGCAAAAACCATGATAAAAGAAGGATTTGAACCTGGTGAAGGCCTGGGAAAATATCAACAAGGAAGAAGGCAACCAGTATGTTTGCTTAAAGTTGTTGAAAAGTTTGGTTTAGGTTATGAGCCAACTGTTGTAGACTGGAAGATTGTCCAAGAAGAAAAAAGAAAGCAGAGGAGCGCCAAATTAGAAAATCGAGAAGTAAGTACTAAGAGAATGATCATACCCCATCTCTACGAGACTTTCAAGAAGAGCACAGTTGAAGCAGATAAGTTAGTATTATAG

mRNA sequence

ATGAACAAAAGGTCTAGGAGACACGCTGCCTCTTCCTCCTCCTCCTCTCCCCCTTTTGACCCAGATAGGTTCATTAGTGGTGAAGCCTCAGCGAGATTTGACAAATATGTGGAGAGTAGGAACTTTATTCCTGAGCATGGTTTCAGCCATGACCCCGAGATGCAACCAAACCTAGTGAACAACATTGTTGCGCGGGGTTGGGGTGACTTTGTTCATCATCCTGCACCCGGGGTAGCGTCTATAGTGAGGGAGTTCTATGCCAACATGGAAGACTCTTCTTCCTCATCCTTTGTTCGAGGACACCGTGTCCCCTACGACTCCCTCACCATCAATAGGTTTTATGGGCTGCCCGACTTTGAGAGGGATGAATATAGTACCTACCTACATAGCCACTTGGACGTTAACGAGGTCATTCAGACAGTTTGTAGGCCAGGGGCCGAATGGGTTATGACAGGAGCAGAGGTGGTGAGATTCAAGACCACCGATCTGTTTGTAGACTACAGGGCGTGGCACACTTTCCTCTGCGCCAAGTTGATGCCTGTGGCGCATCTAAGCGACGTTACCAAGAGTCGTGCCATCCTGCTTTTCGCTATCGCCACAGAGCCACATCGTGAAGCTTTAATGGACGTTTTGAACCAAGCTCATGTGAATCATGACATCACCGTTGAAAAGTTGGGTGGAATTGTAGGGAACATCACTGCTTCCAACACTATTACTTTTACAGACGAGGAGATTCCACCAGAAGGTATGGGTCATACTAAAGCTCTGCACATAGTCGTAAAATGCAAGGATTATGCGATAGCTAAAGTCCTTGTTGATAATGGGACCTCCTTAAATGTGATGCCAATGTCCACACTATTAAAGCTACCTGTAGATCCATCCCATATTAAACACAGTAGCACTGTAGTAAGAGCTTTCGATGGGACTCGTAGAGAAGTCATGGGCGAAATCGAATTACCCATTAAAATTGGACCTCGCACCTTCAACGTGACATTTCAAGTGATGGACATAACTTCGACCTATAGTTGTCTATTGGGGAGGCCCTGGATTCATTCAGTTGGGGTTATTCCGTCAACTCTGCATCAACGATTAAAGTTTGTTTTCGAGAATACTATGGTGAGCATATTCAGCCAGGAAAATGTGCTGGTCACTAAATCTACTGCAACCCCTTATGTAGAGGCAAGAAAAGAAGGTTTGGAATGTTCTTTTCAATCTTTTGAGATCGCAAATGCTACTATTTTTACCCATGACGAGGATCGAAGTCTAGAACAGTCTTTGTCAAGAGCTTCAATGATGGTTGCAAAAACCATGATAAAAGAAGGATTTGAACCTGGTGAAGGCCTGGGAAAATATCAACAAGGAAGAAGGCAACCAGTATGTTTGCTTAAAGTTGTTGAAAAGTTTGGTTTAGGTTATGAGCCAACTGTTGTAGACTGGAAGATTGTCCAAGAAGAAAAAAGAAAGCAGAGGAGCGCCAAATTAGAAAATCGAGAAGTAAGTACTAAGAGAATGATCATACCCCATCTCTACGAGACTTTCAAGAAGAGCACAGTTGAAGCAGATAAGTTAGTATTATAG

Coding sequence (CDS)

ATGAACAAAAGGTCTAGGAGACACGCTGCCTCTTCCTCCTCCTCCTCTCCCCCTTTTGACCCAGATAGGTTCATTAGTGGTGAAGCCTCAGCGAGATTTGACAAATATGTGGAGAGTAGGAACTTTATTCCTGAGCATGGTTTCAGCCATGACCCCGAGATGCAACCAAACCTAGTGAACAACATTGTTGCGCGGGGTTGGGGTGACTTTGTTCATCATCCTGCACCCGGGGTAGCGTCTATAGTGAGGGAGTTCTATGCCAACATGGAAGACTCTTCTTCCTCATCCTTTGTTCGAGGACACCGTGTCCCCTACGACTCCCTCACCATCAATAGGTTTTATGGGCTGCCCGACTTTGAGAGGGATGAATATAGTACCTACCTACATAGCCACTTGGACGTTAACGAGGTCATTCAGACAGTTTGTAGGCCAGGGGCCGAATGGGTTATGACAGGAGCAGAGGTGGTGAGATTCAAGACCACCGATCTGTTTGTAGACTACAGGGCGTGGCACACTTTCCTCTGCGCCAAGTTGATGCCTGTGGCGCATCTAAGCGACGTTACCAAGAGTCGTGCCATCCTGCTTTTCGCTATCGCCACAGAGCCACATCGTGAAGCTTTAATGGACGTTTTGAACCAAGCTCATGTGAATCATGACATCACCGTTGAAAAGTTGGGTGGAATTGTAGGGAACATCACTGCTTCCAACACTATTACTTTTACAGACGAGGAGATTCCACCAGAAGGTATGGGTCATACTAAAGCTCTGCACATAGTCGTAAAATGCAAGGATTATGCGATAGCTAAAGTCCTTGTTGATAATGGGACCTCCTTAAATGTGATGCCAATGTCCACACTATTAAAGCTACCTGTAGATCCATCCCATATTAAACACAGTAGCACTGTAGTAAGAGCTTTCGATGGGACTCGTAGAGAAGTCATGGGCGAAATCGAATTACCCATTAAAATTGGACCTCGCACCTTCAACGTGACATTTCAAGTGATGGACATAACTTCGACCTATAGTTGTCTATTGGGGAGGCCCTGGATTCATTCAGTTGGGGTTATTCCGTCAACTCTGCATCAACGATTAAAGTTTGTTTTCGAGAATACTATGGTGAGCATATTCAGCCAGGAAAATGTGCTGGTCACTAAATCTACTGCAACCCCTTATGTAGAGGCAAGAAAAGAAGGTTTGGAATGTTCTTTTCAATCTTTTGAGATCGCAAATGCTACTATTTTTACCCATGACGAGGATCGAAGTCTAGAACAGTCTTTGTCAAGAGCTTCAATGATGGTTGCAAAAACCATGATAAAAGAAGGATTTGAACCTGGTGAAGGCCTGGGAAAATATCAACAAGGAAGAAGGCAACCAGTATGTTTGCTTAAAGTTGTTGAAAAGTTTGGTTTAGGTTATGAGCCAACTGTTGTAGACTGGAAGATTGTCCAAGAAGAAAAAAGAAAGCAGAGGAGCGCCAAATTAGAAAATCGAGAAGTAAGTACTAAGAGAATGATCATACCCCATCTCTACGAGACTTTCAAGAAGAGCACAGTTGAAGCAGATAAGTTAGTATTATAG

Protein sequence

MNKRSRRHAASSSSSSPPFDPDRFISGEASARFDKYVESRNFIPEHGFSHDPEMQPNLVNNIVARGWGDFVHHPAPGVASIVREFYANMEDSSSSSFVRGHRVPYDSLTINRFYGLPDFERDEYSTYLHSHLDVNEVIQTVCRPGAEWVMTGAEVVRFKTTDLFVDYRAWHTFLCAKLMPVAHLSDVTKSRAILLFAIATEPHREALMDVLNQAHVNHDITVEKLGGIVGNITASNTITFTDEEIPPEGMGHTKALHIVVKCKDYAIAKVLVDNGTSLNVMPMSTLLKLPVDPSHIKHSSTVVRAFDGTRREVMGEIELPIKIGPRTFNVTFQVMDITSTYSCLLGRPWIHSVGVIPSTLHQRLKFVFENTMVSIFSQENVLVTKSTATPYVEARKEGLECSFQSFEIANATIFTHDEDRSLEQSLSRASMMVAKTMIKEGFEPGEGLGKYQQGRRQPVCLLKVVEKFGLGYEPTVVDWKIVQEEKRKQRSAKLENREVSTKRMIIPHLYETFKKSTVEADKLVL

Homology

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BLAST of Lcy04g001420 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 8.0e-105
Identity = 189/323 (58.51%), Postives = 252/323 (78.02%), Query Frame = 0


Query: 192  AILLFAIATEPHREALMDVLNQAHVNHDITVEKLGGIVGNITASNTITFTDEEIPPEGMG 251
            ++L   + +EPHR+ L+D+LN+AHV HDI+V  L  IV NI A+N I+FTDEEIPPEG G
Sbjct: 756  SMLSLFMYSEPHRKVLLDILNRAHVGHDISVNALSEIVENIIATNCISFTDEEIPPEGTG 815

Query: 252  HTKALHIVVKCKDYAIAKVLVDNGTSLNVMPMSTLLKLPVDPSHIKHSSTVVRAFDGTRR 311
            HTKALHI VKCKD+ +A+VLVDNG+SLN+M  STL+KLP+DPS+++ S+ VVRAFDG RR
Sbjct: 816  HTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARR 875

Query: 312  EVMGEIELPIKIGPRTFNVTFQVMDITSTYSCLLGRPWIHSVGVIPSTLHQRLKFVFENT 371
            EV+G+I++P+KIGP TFNV+FQVMDI S+YSCLLGRPWIHS G +PS+LHQRLKF  E  
Sbjct: 876  EVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVECG 935

Query: 372  MVSIFSQENVLVTKSTATPYVEARKEGLECSFQSFEIANATIFTHDEDRSLEQSLSRASM 431
               ++ +E++ VTK++  PYVEA +E LECS++SFEIANATIF   E  S+++ +S+ S+
Sbjct: 936  QAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFP-TEGLSMDRYVSKTSL 995

Query: 432  MVAKTMIKEGFEPGEGLGKYQQGRRQPVCLLKVVEKFGLGYEPTVVDWKIVQEEKRKQRS 491
            M+AKTMIK GF+  +GLGK  QG  + + L K  E FGLGY+P   +W+ V+ +K+++RS
Sbjct: 996  MIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKENFGLGYKPVTSEWEKVRAKKKEKRS 1055

Query: 492  AKLENREVSTKRMIIPHLYETFK 515
            A L   E+  +R+ IPHL ETFK
Sbjct: 1056 ALLMGCEMKEERISIPHLSETFK 1077

[Close]

BLAST of Lcy04g001420 vs. ExPASy TrEMBL
Match: A0A5D3DEB3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1721G00440 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.0e-99
Identity = 184/330 (55.76%), Postives = 244/330 (73.94%), Query Frame = 0


Query: 192  AILLFAIATEPHREALMDVLNQAHVNHDITVEKLGGIVGNITASNTITFTDEEIPPEGMG 251
            ++L   + +EPHR+ L+D+LN+AHV HDI+VEK  GI+GNIT+SN+I FTD+EIPPEG+G
Sbjct: 711  SLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFSGIIGNITSSNSIVFTDDEIPPEGLG 770

Query: 252  HTKALHIVVKCKDYAIAKVLVDNGTSLNVMPMSTLLKLPVDPSHIKHSSTVVRAFDGTRR 311
            HTKALHI VKCKDY IA+VLVDNG++LN+MP STLLKLPVD SHIK S+ VV+AFDG+RR
Sbjct: 771  HTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKAFDGSRR 830

Query: 312  EVMGEIELPIKIGPRTFNVTFQVMDITSTYSCLLGRPWIHSVGVIPSTLHQRLKFVFENT 371
            EVMG+IELP+KIGP  FN+ FQVM+IT TYS LLGRPWIHS GV+PSTLHQ+LKF+  + 
Sbjct: 831  EVMGDIELPVKIGPCIFNIVFQVMEITPTYSFLLGRPWIHSAGVVPSTLHQKLKFIVGSK 890

Query: 372  MVSIFSQENVLVTKSTATPYVEARKEGLECSFQSFEIANATIFTHDEDRSLEQSLSRASM 431
            ++ +  +E+ L+TKS +TPYVEA +E LECSF+SFEIA+AT+     D  ++   S+  +
Sbjct: 891  LICVMGEEDFLITKSVSTPYVEATEEALECSFRSFEIAHATMMEATVDEVIKPHKSKVEV 950

Query: 432  MVAKTMIKEGFEPGEGLGKYQQGRRQPVCLLKVVE---KFGLGYEPTVVDWKIVQEEKRK 491
            M  + M   G+   + L            LLK+     +FGLGY+P++ D   +QE+K+K
Sbjct: 951  MTTRIMGGGGYSLNKNL----------ETLLKIPSNDGRFGLGYKPSIYDKIRLQEKKKK 1010

Query: 492  QRSAKLENREVSTKRMIIPHLYETFKKSTV 519
            +R AKLE RE      +IP LY+ FK + +
Sbjct: 1011 KRLAKLEMREFDPSIKLIPELYDIFKSAGI 1030

[Close]

BLAST of Lcy04g001420 vs. ExPASy TrEMBL
Match: A0A5A7TI68 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00990 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.6e-97
Identity = 179/311 (57.56%), Postives = 240/311 (77.17%), Query Frame = 0


Query: 205 EALMDVLNQAHVNHDIT-VEKLGGIVGNITASNTITFTDEEIPPEGMGHTKALHIVVKCK 264
           + L+D+LN+AHV HDI+ V+ L  IV NITA++ I+FTDEEIPP+G GHTKALHI VKCK
Sbjct: 140 KVLLDILNRAHVGHDISVVDALSEIVENITATHCISFTDEEIPPKGTGHTKALHISVKCK 199

Query: 265 DYAIAKVLVDNGTSLNVMPMSTLLKLPVDPSHIKHSSTVVRAFDGTRREVMGEIELPIKI 324
           D+ +A+VLVDNG+SLN+M  STL+KLP+DPS+++ S  VVRAFDG RREV+ +I++P+KI
Sbjct: 200 DHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLRSSIMVVRAFDGARREVIRDIDIPLKI 259

Query: 325 GPRTFNVTFQVMDITSTYSCLLGRPWIHSVGVIPSTLHQRLKFVFENTMVSIFSQENVLV 384
           GP TFNV+ QVMD+ S+YSCLLGRPWIHS G +PS LHQRLKF  E     ++ ++N+ V
Sbjct: 260 GPSTFNVSVQVMDVNSSYSCLLGRPWIHSAGAVPSLLHQRLKFSVEGGQAIVYGEDNMFV 319

Query: 385 TKSTATPYVEARKEGLECSFQSFEIANATIFTHDEDRSLEQSLSRASMMVAKTMIKEGFE 444
           TK +  PYVEA +E LECS++SFEIANATIF   E  S+++ +S+ S+M+AKTMIK  F+
Sbjct: 320 TKISTLPYVEATEEALECSYRSFEIANATIFP-IEGLSMDRYVSKTSLMIAKTMIKSCFQ 379

Query: 445 PGEGLGKYQQGRRQPVCLLKVVEKFGLGYEPTVVDWKIVQEEKRKQRSAKLENREVSTKR 504
             +GLGK  QG  + + L K  EKFGLGY+P   +W+ V+ +K+++RS  L   E+  +R
Sbjct: 380 MHKGLGKDNQGDSKVISLPKAKEKFGLGYKPAASEWEKVRAKKKEKRSTLLVGCEMKEER 439

Query: 505 MIIPHLYETFK 515
           + IPHL+ETFK
Sbjct: 440 ISIPHLFETFK 449

[Close]

BLAST of Lcy04g001420 vs. ExPASy TrEMBL
Match: A0A5A7T1W2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00060 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 4.7e-97
Identity = 180/324 (55.56%), Postives = 238/324 (73.46%), Query Frame = 0


Query: 198  IATEPHREALMDVLNQAHVNHDITVEKLGGIVGNITASNTITFTDEEIPPEGMGHTKALH 257
            +  +PHR+AL+D+LN+AHV HDI+VEK  GI+GNIT+SN+I FTD+EIPPEG+GHTKALH
Sbjct: 1134 VKQKPHRKALLDILNKAHVGHDISVEKFSGIIGNITSSNSIVFTDDEIPPEGLGHTKALH 1193

Query: 258  IVVKCKDYAIAKVLVDNGTSLNVMPMSTLLKLPVDPSHIKHSSTVVRAFDGTRREVMGEI 317
            I +KCKDY IA+VLVDNG++LN+MP STLL LPVD SHIK S+ VV+AFDG+RREVMG+I
Sbjct: 1194 IQLKCKDYVIARVLVDNGSALNIMPKSTLLMLPVDMSHIKSSTMVVKAFDGSRREVMGDI 1253

Query: 318  ELPIKIGPRTFNVTFQVMDITSTYSCLLGRPWIHSVGVIPSTLHQRLKFVFENTMVSIFS 377
            ELP+KIGP  FN+ FQVM+IT TYS LLGRPWIHS GV+PSTLHQ+LKF+  + ++ +  
Sbjct: 1254 ELPVKIGPCIFNIVFQVMEITPTYSFLLGRPWIHSAGVVPSTLHQKLKFIVGSKLICVMG 1313

Query: 378  QENVLVTKSTATPYVEARKEGLECSFQSFEIANATIFTHDEDRSLEQSLSRASMMVAKTM 437
            +E+ L+TK  +TPYVEA +E LECSF SFEIA+AT+     D  ++   S+  +M  + M
Sbjct: 1314 EEDFLITKPVSTPYVEATEEALECSFCSFEIAHATMMEATVDEVIKPHKSKVEVMTTRIM 1373

Query: 438  IKEGFEPGEGLGKYQQGRRQPVCLLKVVE---KFGLGYEPTVVDWKIVQEEKRKQRSAKL 497
               G+   + L            LLK+     +FGLGY+P++ D   +QE+K+K+R  KL
Sbjct: 1374 GGGGYSLNKNL----------ETLLKIPSNDGRFGLGYKPSIYDKIRLQEKKKKKRLVKL 1433

Query: 498  ENREVSTKRMIIPHLYETFKKSTV 519
            E RE      +IP LY+TFK + +
Sbjct: 1434 EMREFDPSIKLIPELYDTFKSAGI 1447

[Close]

BLAST of Lcy04g001420 vs. ExPASy TrEMBL
Match: A0A5A7T5W6 (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00370 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 6.2e-97
Identity = 180/324 (55.56%), Postives = 238/324 (73.46%), Query Frame = 0


Query: 198 IATEPHREALMDVLNQAHVNHDITVEKLGGIVGNITASNTITFTDEEIPPEGMGHTKALH 257
           +  +P R+ L+D+LN+AHV HDI+VEK  GI+GNIT+SN+I FTD+EIPPEG+GHTKALH
Sbjct: 677 VKQKPRRKVLLDILNKAHVGHDISVEKFSGIIGNITSSNSIVFTDDEIPPEGLGHTKALH 736

Query: 258 IVVKCKDYAIAKVLVDNGTSLNVMPMSTLLKLPVDPSHIKHSSTVVRAFDGTRREVMGEI 317
           I +KCKDY IA+VLVDNG++LN+MP STLLKLPVD SHIK S+ VV+AFDG+RREVMG+I
Sbjct: 737 IQLKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKAFDGSRREVMGDI 796

Query: 318 ELPIKIGPRTFNVTFQVMDITSTYSCLLGRPWIHSVGVIPSTLHQRLKFVFENTMVSIFS 377
           ELP+KIGP  FN+ FQVM+IT TYS LLGRPWIHS GV+PSTLHQ+LKF+  + ++ +  
Sbjct: 797 ELPVKIGPCIFNIVFQVMEITPTYSFLLGRPWIHSAGVVPSTLHQKLKFIVGSKLICVMG 856

Query: 378 QENVLVTKSTATPYVEARKEGLECSFQSFEIANATIFTHDEDRSLEQSLSRASMMVAKTM 437
           +E+ L+TK  +TPYVEA +E LECSF+SFEIA+AT+     D  ++   S+  +M  + M
Sbjct: 857 EEDFLITKPVSTPYVEAMEEALECSFRSFEIAHATMMEATVDEVIKPHKSKVEVMTTRIM 916

Query: 438 IKEGFEPGEGLGKYQQGRRQPVCLLKVVE---KFGLGYEPTVVDWKIVQEEKRKQRSAKL 497
              G+   + L            LLK+     +FGLGY+P++ D   +QE K+K+R AKL
Sbjct: 917 GGGGYSLNKNL----------ETLLKIPSNDGRFGLGYKPSIYDKIRLQEGKKKKRLAKL 976

Query: 498 ENREVSTKRMIIPHLYETFKKSTV 519
           E RE      +IP LY+TFK + +
Sbjct: 977 EMREFDPSIKLIPELYDTFKSAGI 990

[Close]

BLAST of Lcy04g001420 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 391.0 bits (1003), Expect = 1.7e-104
Identity = 189/323 (58.51%), Postives = 252/323 (78.02%), Query Frame = 0


Query: 192  AILLFAIATEPHREALMDVLNQAHVNHDITVEKLGGIVGNITASNTITFTDEEIPPEGMG 251
            ++L   + +EPHR+ L+D+LN+AHV HDI+V  L  IV NI A+N I+FTDEEIPPEG G
Sbjct: 756  SMLSLFMYSEPHRKVLLDILNRAHVGHDISVNALSEIVENIIATNCISFTDEEIPPEGTG 815

Query: 252  HTKALHIVVKCKDYAIAKVLVDNGTSLNVMPMSTLLKLPVDPSHIKHSSTVVRAFDGTRR 311
            HTKALHI VKCKD+ +A+VLVDNG+SLN+M  STL+KLP+DPS+++ S+ VVRAFDG RR
Sbjct: 816  HTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMVVRAFDGARR 875

Query: 312  EVMGEIELPIKIGPRTFNVTFQVMDITSTYSCLLGRPWIHSVGVIPSTLHQRLKFVFENT 371
            EV+G+I++P+KIGP TFNV+FQVMDI S+YSCLLGRPWIHS G +PS+LHQRLKF  E  
Sbjct: 876  EVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVECG 935

Query: 372  MVSIFSQENVLVTKSTATPYVEARKEGLECSFQSFEIANATIFTHDEDRSLEQSLSRASM 431
               ++ +E++ VTK++  PYVEA +E LECS++SFEIANATIF   E  S+++ +S+ S+
Sbjct: 936  QAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFP-TEGLSMDRYVSKTSL 995

Query: 432  MVAKTMIKEGFEPGEGLGKYQQGRRQPVCLLKVVEKFGLGYEPTVVDWKIVQEEKRKQRS 491
            M+AKTMIK GF+  +GLGK  QG  + + L K  E FGLGY+P   +W+ V+ +K+++RS
Sbjct: 996  MIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKENFGLGYKPVTSEWEKVRAKKKEKRS 1055

Query: 492  AKLENREVSTKRMIIPHLYETFK 515
            A L   E+  +R+ IPHL ETFK
Sbjct: 1056 ALLMGCEMKEERISIPHLSETFK 1077

[Close]

BLAST of Lcy04g001420 vs. NCBI nr
Match: TYK21788.1 (uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 372.5 bits (955), Expect = 6.1e-99
Identity = 184/330 (55.76%), Postives = 244/330 (73.94%), Query Frame = 0


Query: 192  AILLFAIATEPHREALMDVLNQAHVNHDITVEKLGGIVGNITASNTITFTDEEIPPEGMG 251
            ++L   + +EPHR+ L+D+LN+AHV HDI+VEK  GI+GNIT+SN+I FTD+EIPPEG+G
Sbjct: 711  SLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFSGIIGNITSSNSIVFTDDEIPPEGLG 770

Query: 252  HTKALHIVVKCKDYAIAKVLVDNGTSLNVMPMSTLLKLPVDPSHIKHSSTVVRAFDGTRR 311
            HTKALHI VKCKDY IA+VLVDNG++LN+MP STLLKLPVD SHIK S+ VV+AFDG+RR
Sbjct: 771  HTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKAFDGSRR 830

Query: 312  EVMGEIELPIKIGPRTFNVTFQVMDITSTYSCLLGRPWIHSVGVIPSTLHQRLKFVFENT 371
            EVMG+IELP+KIGP  FN+ FQVM+IT TYS LLGRPWIHS GV+PSTLHQ+LKF+  + 
Sbjct: 831  EVMGDIELPVKIGPCIFNIVFQVMEITPTYSFLLGRPWIHSAGVVPSTLHQKLKFIVGSK 890

Query: 372  MVSIFSQENVLVTKSTATPYVEARKEGLECSFQSFEIANATIFTHDEDRSLEQSLSRASM 431
            ++ +  +E+ L+TKS +TPYVEA +E LECSF+SFEIA+AT+     D  ++   S+  +
Sbjct: 891  LICVMGEEDFLITKSVSTPYVEATEEALECSFRSFEIAHATMMEATVDEVIKPHKSKVEV 950

Query: 432  MVAKTMIKEGFEPGEGLGKYQQGRRQPVCLLKVVE---KFGLGYEPTVVDWKIVQEEKRK 491
            M  + M   G+   + L            LLK+     +FGLGY+P++ D   +QE+K+K
Sbjct: 951  MTTRIMGGGGYSLNKNL----------ETLLKIPSNDGRFGLGYKPSIYDKIRLQEKKKK 1010

Query: 492  QRSAKLENREVSTKRMIIPHLYETFKKSTV 519
            +R AKLE RE      +IP LY+ FK + +
Sbjct: 1011 KRLAKLEMREFDPSIKLIPELYDIFKSAGI 1030

[Close]

BLAST of Lcy04g001420 vs. NCBI nr
Match: KAA0043020.1 (uncharacterized protein E6C27_scaffold75G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 366.7 bits (940), Expect = 3.4e-97
Identity = 179/311 (57.56%), Postives = 240/311 (77.17%), Query Frame = 0


Query: 205 EALMDVLNQAHVNHDIT-VEKLGGIVGNITASNTITFTDEEIPPEGMGHTKALHIVVKCK 264
           + L+D+LN+AHV HDI+ V+ L  IV NITA++ I+FTDEEIPP+G GHTKALHI VKCK
Sbjct: 140 KVLLDILNRAHVGHDISVVDALSEIVENITATHCISFTDEEIPPKGTGHTKALHISVKCK 199

Query: 265 DYAIAKVLVDNGTSLNVMPMSTLLKLPVDPSHIKHSSTVVRAFDGTRREVMGEIELPIKI 324
           D+ +A+VLVDNG+SLN+M  STL+KLP+DPS+++ S  VVRAFDG RREV+ +I++P+KI
Sbjct: 200 DHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLRSSIMVVRAFDGARREVIRDIDIPLKI 259

Query: 325 GPRTFNVTFQVMDITSTYSCLLGRPWIHSVGVIPSTLHQRLKFVFENTMVSIFSQENVLV 384
           GP TFNV+ QVMD+ S+YSCLLGRPWIHS G +PS LHQRLKF  E     ++ ++N+ V
Sbjct: 260 GPSTFNVSVQVMDVNSSYSCLLGRPWIHSAGAVPSLLHQRLKFSVEGGQAIVYGEDNMFV 319

Query: 385 TKSTATPYVEARKEGLECSFQSFEIANATIFTHDEDRSLEQSLSRASMMVAKTMIKEGFE 444
           TK +  PYVEA +E LECS++SFEIANATIF   E  S+++ +S+ S+M+AKTMIK  F+
Sbjct: 320 TKISTLPYVEATEEALECSYRSFEIANATIFP-IEGLSMDRYVSKTSLMIAKTMIKSCFQ 379

Query: 445 PGEGLGKYQQGRRQPVCLLKVVEKFGLGYEPTVVDWKIVQEEKRKQRSAKLENREVSTKR 504
             +GLGK  QG  + + L K  EKFGLGY+P   +W+ V+ +K+++RS  L   E+  +R
Sbjct: 380 MHKGLGKDNQGDSKVISLPKAKEKFGLGYKPAASEWEKVRAKKKEKRSTLLVGCEMKEER 439

Query: 505 MIIPHLYETFK 515
           + IPHL+ETFK
Sbjct: 440 ISIPHLFETFK 449

[Close]

BLAST of Lcy04g001420 vs. NCBI nr
Match: KAA0036933.1 (uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 365.2 bits (936), Expect = 9.8e-97
Identity = 180/324 (55.56%), Postives = 238/324 (73.46%), Query Frame = 0


Query: 198  IATEPHREALMDVLNQAHVNHDITVEKLGGIVGNITASNTITFTDEEIPPEGMGHTKALH 257
            +  +PHR+AL+D+LN+AHV HDI+VEK  GI+GNIT+SN+I FTD+EIPPEG+GHTKALH
Sbjct: 1134 VKQKPHRKALLDILNKAHVGHDISVEKFSGIIGNITSSNSIVFTDDEIPPEGLGHTKALH 1193

Query: 258  IVVKCKDYAIAKVLVDNGTSLNVMPMSTLLKLPVDPSHIKHSSTVVRAFDGTRREVMGEI 317
            I +KCKDY IA+VLVDNG++LN+MP STLL LPVD SHIK S+ VV+AFDG+RREVMG+I
Sbjct: 1194 IQLKCKDYVIARVLVDNGSALNIMPKSTLLMLPVDMSHIKSSTMVVKAFDGSRREVMGDI 1253

Query: 318  ELPIKIGPRTFNVTFQVMDITSTYSCLLGRPWIHSVGVIPSTLHQRLKFVFENTMVSIFS 377
            ELP+KIGP  FN+ FQVM+IT TYS LLGRPWIHS GV+PSTLHQ+LKF+  + ++ +  
Sbjct: 1254 ELPVKIGPCIFNIVFQVMEITPTYSFLLGRPWIHSAGVVPSTLHQKLKFIVGSKLICVMG 1313

Query: 378  QENVLVTKSTATPYVEARKEGLECSFQSFEIANATIFTHDEDRSLEQSLSRASMMVAKTM 437
            +E+ L+TK  +TPYVEA +E LECSF SFEIA+AT+     D  ++   S+  +M  + M
Sbjct: 1314 EEDFLITKPVSTPYVEATEEALECSFCSFEIAHATMMEATVDEVIKPHKSKVEVMTTRIM 1373

Query: 438  IKEGFEPGEGLGKYQQGRRQPVCLLKVVE---KFGLGYEPTVVDWKIVQEEKRKQRSAKL 497
               G+   + L            LLK+     +FGLGY+P++ D   +QE+K+K+R  KL
Sbjct: 1374 GGGGYSLNKNL----------ETLLKIPSNDGRFGLGYKPSIYDKIRLQEKKKKKRLVKL 1433

Query: 498  ENREVSTKRMIIPHLYETFKKSTV 519
            E RE      +IP LY+TFK + +
Sbjct: 1434 EMREFDPSIKLIPELYDTFKSAGI 1447

[Close]

BLAST of Lcy04g001420 vs. NCBI nr
Match: KAA0036957.1 (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 364.8 bits (935), Expect = 1.3e-96
Identity = 180/324 (55.56%), Postives = 238/324 (73.46%), Query Frame = 0


Query: 198 IATEPHREALMDVLNQAHVNHDITVEKLGGIVGNITASNTITFTDEEIPPEGMGHTKALH 257
           +  +P R+ L+D+LN+AHV HDI+VEK  GI+GNIT+SN+I FTD+EIPPEG+GHTKALH
Sbjct: 677 VKQKPRRKVLLDILNKAHVGHDISVEKFSGIIGNITSSNSIVFTDDEIPPEGLGHTKALH 736

Query: 258 IVVKCKDYAIAKVLVDNGTSLNVMPMSTLLKLPVDPSHIKHSSTVVRAFDGTRREVMGEI 317
           I +KCKDY IA+VLVDNG++LN+MP STLLKLPVD SHIK S+ VV+AFDG+RREVMG+I
Sbjct: 737 IQLKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKAFDGSRREVMGDI 796

Query: 318 ELPIKIGPRTFNVTFQVMDITSTYSCLLGRPWIHSVGVIPSTLHQRLKFVFENTMVSIFS 377
           ELP+KIGP  FN+ FQVM+IT TYS LLGRPWIHS GV+PSTLHQ+LKF+  + ++ +  
Sbjct: 797 ELPVKIGPCIFNIVFQVMEITPTYSFLLGRPWIHSAGVVPSTLHQKLKFIVGSKLICVMG 856

Query: 378 QENVLVTKSTATPYVEARKEGLECSFQSFEIANATIFTHDEDRSLEQSLSRASMMVAKTM 437
           +E+ L+TK  +TPYVEA +E LECSF+SFEIA+AT+     D  ++   S+  +M  + M
Sbjct: 857 EEDFLITKPVSTPYVEAMEEALECSFRSFEIAHATMMEATVDEVIKPHKSKVEVMTTRIM 916

Query: 438 IKEGFEPGEGLGKYQQGRRQPVCLLKVVE---KFGLGYEPTVVDWKIVQEEKRKQRSAKL 497
              G+   + L            LLK+     +FGLGY+P++ D   +QE K+K+R AKL
Sbjct: 917 GGGGYSLNKNL----------ETLLKIPSNDGRFGLGYKPSIYDKIRLQEGKKKKRLAKL 976

Query: 498 ENREVSTKRMIIPHLYETFKKSTV 519
           E RE      +IP LY+TFK + +
Sbjct: 977 EMREFDPSIKLIPELYDTFKSAGI 990

The following BLAST results are available for this feature:

BLAST of Lcy04g001420 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g001420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V681	8.0e-105	58.51	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3DEB3	3.0e-99	55.76	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TI68	1.6e-97	57.56	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7T1W2	4.7e-97	55.56	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T5W6	6.2e-97	55.56	RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein...	[more]

BLAST of Lcy04g001420 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061241.1	1.7e-104	58.51	uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]	[more]
TYK21788.1	6.1e-99	55.76	uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]	[more]
KAA0043020.1	3.4e-97	57.56	uncharacterized protein E6C27_scaffold75G00990 [Cucumis melo var. makuwa]	[more]
KAA0036933.1	9.8e-97	55.56	uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]	[more]
KAA0036957.1	1.3e-96	55.56	RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein...	[more]

BLAST of Lcy04g001420 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 437..472 e-value: 5.0E-5 score: 23.1
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 429..475 score: 10.4072
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 235..381 e-value: 4.1E-14 score: 54.4
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 267..355
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR33240	OS08G0508500 PROTEIN	coord: 193..411
None	No IPR available	PANTHER	PTHR33240:SF7	GAG-PRO-LIKE PROTEIN	coord: 193..411
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 268..351 e-value: 2.69461E-14 score: 66.5912

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g001420.1	Lcy04g001420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0034061	DNA polymerase activity
molecular_function	GO:0003676	nucleic acid binding