Homology
BLAST of Lcy03g019850 vs. ExPASy Swiss-Prot
Match:
Q9STK5 (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g48250 PE=2 SV=1)
HSP 1 Score: 709.1 bits (1829), Expect = 4.4e-203
Identity = 362/624 (58.01%), Postives = 467/624 (74.84%), Query Frame = 0
Query: 1 MARRRAILTSLRLANSFFSTQFSSTRSLYPQVTQFSPSSSSLPNQSHFPLFTINHGILHF 60
M R AIL+SLR A S ST+ +RS +V S SS L + + P + F
Sbjct: 1 MYRSMAILSSLRHAYSQISTRSYLSRS---KVGFSSNLSSPLDSFAIVPSRFL-WKFRTF 60
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SSKP S+L+LV NDWS+ +E L + +LTHET +YVL++L+K P+KA F +W
Sbjct: 61 SSKPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRD 120
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
+G + S+ +YSI+LRI VQ SMK+FW+TLR MK+ GFYLDE+TY TI G L + K AD
Sbjct: 121 SGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKAD 180
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
A A+ HFY RML++NAM V +V +V +W+ V +L+ + +VLSD+FVIRVLKEL
Sbjct: 181 AVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKEL 240
Query: 241 RNFPLKALSLFHWV---GRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEI 300
R PLKAL+ FHWV G Y H+TVTYNA RVL R +SV FW VV+EMK AG+++
Sbjct: 241 REHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDM 300
Query: 301 DIDTYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRSISASDNPDLSLVFR 360
D+DTYIK+SRQFQ+S+MMA+ V+LYE MMDGP+KPS+QDCSLLLR +S S NPDL LVFR
Sbjct: 301 DLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFR 360
Query: 361 VAKKFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLC 420
V++K+E+TG SLSKA YDGIHRSLTS G+FDEAE I K+M+NAGYEPDN+TYSQLVFGLC
Sbjct: 361 VSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLC 420
Query: 421 KARRLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDAD 480
KA+RLEEA +LD+MEAQGC PDIKTWTILIQGHC NE+DKAL CFA M+EK D D++
Sbjct: 421 KAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSN 480
Query: 481 LLDVLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKFEEAITLLSL 540
LLDVLI GF+ K +GA L+E+V A+++PWQ+TYK LI+KLL+++K EEA+ LL +
Sbjct: 481 LLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQM 540
Query: 541 MKKQNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEA 600
MKKQNYP + E F Y++KFGT+E+A + L VLSSK+ PS +AY H+ ++F+ EGR ++A
Sbjct: 541 MKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDA 600
Query: 601 KDLLFKCPHHIRKHSEICKLFGSA 622
K+LLF CPHH + H +I +LFG+A
Sbjct: 601 KNLLFICPHHFKTHPKISELFGAA 620
BLAST of Lcy03g019850 vs. ExPASy Swiss-Prot
Match:
Q9M891 (Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g02490 PE=2 SV=1)
HSP 1 Score: 313.9 bits (803), Expect = 4.1e-84
Identity = 178/562 (31.67%), Postives = 302/562 (53.74%), Query Frame = 0
Query: 67 LLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGKNGFTQS 126
++++ S + + + EL++ + ++HE + VL+ L+ P A FF W S
Sbjct: 84 VIDVFSRLNGKDEITKELDSNDVVISHELALRVLRELESSPDVAGRFFKWGLEAYPQKLS 143
Query: 127 SSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 186
S Y+ +LRIF N + +FW + MK++G + + K+ D L
Sbjct: 144 SKSYNTMLRIFGVNGLVDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGLENDLERLKE 203
Query: 187 FYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 246
+ DN++D V +V IV+ W ++V ++L L + V VL++L P K
Sbjct: 204 LFASGSMDNSVDKVCNRVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRK 263
Query: 247 ALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDIDTYIKIS 306
AL F W+ + H+ TYNA+ RVLG++ ++ F ++EE++ AG+E++++TY+++S
Sbjct: 264 ALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVS 323
Query: 307 RQFQRSKMMADAVRLYELMMDGPYK--PSLQDCSLLLRSISASDNPDLSLVFRVAKKFEA 366
+F ++KM+ +AV L+E M G P+ CSLLL+ I + D+ L R K +
Sbjct: 324 ARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTG 383
Query: 367 TGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLCKARRLEE 426
GN + + +SL S +F ++ ++K+M GY P S + GL + + +E
Sbjct: 384 NGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDE 443
Query: 427 ACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDAD-LLDVLI 486
A EL++ MEA G D K L++GHC A ++++A CF KMI K A + L+
Sbjct: 444 ANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLV 503
Query: 487 SGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVR-----KFEEAITLLSLM 546
+ + Y+L ELV + L+PW +TYK ++ LL + FEEA++LL +M
Sbjct: 504 LAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMM 563
Query: 547 KKQNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEAK 606
+ +PPF +PF+ Y+S GT A LK ++SK++PS S L +F++ R+SEA+
Sbjct: 564 RNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQ 623
Query: 607 DLLFKCPHHIRKHSEICKLFGS 621
DLL P +IR+++E+ +LF +
Sbjct: 624 DLLSMSPSYIRRNAEVLELFNT 645
BLAST of Lcy03g019850 vs. ExPASy Swiss-Prot
Match:
Q8LPF1 (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15980 PE=2 SV=1)
HSP 1 Score: 307.4 bits (786), Expect = 3.8e-82
Identity = 174/576 (30.21%), Postives = 304/576 (52.78%), Query Frame = 0
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SS +++++ S + + ELE+ ++ + + VL++L+ P A FF W
Sbjct: 84 SSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEA 143
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
+ SS Y+++LRI N + +FW + VMK++G L + ++ +D
Sbjct: 144 SPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESD 203
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
L + DN+ + V +V IV+ EW +V +++ L + V +++ L
Sbjct: 204 LLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERL 263
Query: 241 RNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDID 300
P KAL F W+ + H+ TYNA+ RVLG++ ++ F +V EM+ AG+E++I+
Sbjct: 264 DVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIE 323
Query: 301 TYIKISRQFQRSKMMADAVRLYELMMDG---PYKPSLQDCSLLLRSISASDNPDLSLVFR 360
TY+++S +F ++K++ +AV L+E+ M G P+ LLL+ I + D+ L R
Sbjct: 324 TYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSR 383
Query: 361 VAKKFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLC 420
K + GN+L+ + + +SL S + +++ ++K MK GY P S + L
Sbjct: 384 AVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLS 443
Query: 421 KARRLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDAD 480
+ + +EA E +D ME+ G D K L++G+C + +D+ALVCF KM+ AD
Sbjct: 444 RKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYAD 503
Query: 481 L-LDVLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVR-----KFEEA 540
+ L+ + + ++ AY+LL V K L+P +TYK L+ LL + FEEA
Sbjct: 504 YSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEA 563
Query: 541 ITLLSLMKKQNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNE 600
++LL +MK +PPF +PF+ Y S G A LK ++S +P +S L +F++
Sbjct: 564 LSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKS 623
Query: 601 GRYSEAKDLLFKCPHHIRKHSEICKLFGSAESKSTA 628
R+SEA+DLL CP++IR + ++ +LF + + +A
Sbjct: 624 ARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNESA 659
BLAST of Lcy03g019850 vs. ExPASy Swiss-Prot
Match:
P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 6.9e-31
Identity = 102/381 (26.77%), Postives = 178/381 (46.72%), Query Frame = 0
Query: 225 GIVLSDSFVIRVLKELRNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFW 284
GI L +IRVL + F W ++P Y H+ ++ +L + A W
Sbjct: 92 GIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVW 151
Query: 285 GVVEEMKKAGHE-IDIDTYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRS 344
G++EEM+K E I+ + ++ + R+F + M+ AV + + M +P LL +
Sbjct: 152 GLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDA 211
Query: 345 ISASDN-PDLSLVFR-VAKKFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAG 404
+ + + + S VF + +KF + Y GK EA+ ++ MK AG
Sbjct: 212 LCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCRE-----GKLMEAKEVLVQMKEAG 271
Query: 405 YEPDNVTYSQLVFGLCKARRLEEACELLDEMEAQGCIPDIKTWTILIQGHC-TANEVDKA 464
EPD V ++ L+ G A ++ +A +L+++M +G P++ +T+LIQ C T +D+A
Sbjct: 272 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 331
Query: 465 LVCFAKMIEKNCDPDADLLDVLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIE 524
+ F +M C+ D LISGF ID Y +L ++ K + P Q TY Q++
Sbjct: 332 MRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM-RKKGVMPSQVTYMQIMV 391
Query: 525 KLLEVRKFEEAITLLSLMKKQNYPP---FPEPFIQYISKFGTVENAAELLKVLSSKEY-P 584
+ +FEE + L+ MK++ P I+ K G V+ A L + + P
Sbjct: 392 AHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSP 451
Query: 585 SMSAYLHIFKSFFNEGRYSEA 598
+ ++ + F ++G EA
Sbjct: 452 GVDTFVIMINGFTSQGFLIEA 466
BLAST of Lcy03g019850 vs. ExPASy Swiss-Prot
Match:
Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 1.2e-30
Identity = 98/386 (25.39%), Postives = 179/386 (46.37%), Query Frame = 0
Query: 216 NVAEKLEGLGIVLSDSFVIRVLKELRNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLG 275
N+ L+ + + LS ++ VL+ R+ A F W R + H++ TYN++ +L
Sbjct: 147 NMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILA 206
Query: 276 RDDSVEAFWGVVEEMKKAGHEIDIDTYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQ 335
+ E V+EEM G + ++T+ + F +K AV ++ELM +K ++
Sbjct: 207 KTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVE 266
Query: 336 DCSLLLRSISASDNPDLSLVFRVAKKFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVK 395
+ LL S+ + + V K T N + TY + EA I
Sbjct: 267 TINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMM---TYTVLLNGWCRVRNLIEAARIWN 326
Query: 396 SMKNAGYEPDNVTYSQLVFGLCKARRLEEACELLDEMEAQGCIPDIKTWTILIQGHCTAN 455
M + G +PD V ++ ++ GL ++R+ +A +L M+++G P+++++TI+I+ C +
Sbjct: 327 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 386
Query: 456 EVDKALVCFAKMIEKNCDPDADLLDVLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATY 515
++ A+ F M++ PDA + LI+GF QKK+D Y+LL E+ K H P TY
Sbjct: 387 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH-PPDGKTY 446
Query: 516 KQLIEKLLEVRKFEEAITLLSLMKKQNYPPFPEPFIQYISKFGTVEN----AAELLKVLS 575
LI+ + + E A + + M + P F + + N A +++
Sbjct: 447 NALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIK 506
Query: 576 SKEYPSMSAYLHIFKSFFNEGRYSEA 598
P ++Y + + EG+ EA
Sbjct: 507 KGICPDDNSYTVLIRGLIGEGKSREA 527
BLAST of Lcy03g019850 vs. ExPASy TrEMBL
Match:
A0A6J1F5I7 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441023 PE=3 SV=1)
HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 571/641 (89.08%), Postives = 595/641 (92.82%), Query Frame = 0
Query: 1 MARRRAILTSLRLANSFFSTQFSSTRSLYPQVTQFSPSSSSLPNQSHFPLFTINHGILHF 60
MARR+AILTSL LANS + STRS Y QVT+F P SSL +QS FP FT NH IL F
Sbjct: 1 MARRKAILTSLTLANSLY-----STRSCYSQVTRFLP--SSLSHQSRFPPFTTNHRILFF 60
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SSKPHSLLELV ANDWSE LETELETLNPTLTHET+VYVLKRLDKEPQKASDFF+WACGK
Sbjct: 61 SSKPHSLLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGK 120
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
NG TQSS IYSILLRI VQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD
Sbjct: 121 NGSTQSSPIYSILLRIVVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
ATALTHFYNRMLQ+NAMD VVQKVV IVL SEWN++VAEKLEGLGIVLSDSFVIRVLKEL
Sbjct: 181 ATALTHFYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKEL 240
Query: 241 RNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDID 300
RNFPLK LS FHWVG RPDYDHNTVTYNAI RVLGRDDS+EAFWG+VEEMK AGHEIDID
Sbjct: 241 RNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDID 300
Query: 301 TYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRSISASDNPDLSLVFRVAK 360
TYIKISRQFQRSKMM DAV+LYELMMDGPYKPSLQDCS+LLRSISASDNPDLSLVFRVAK
Sbjct: 301 TYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAK 360
Query: 361 KFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLCKAR 420
KFEATG SLSKA YDGIHRSLTSAGKFDEAENIVKSM+NAGYEPDNVTYSQLVFGLCKAR
Sbjct: 361 KFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKAR 420
Query: 421 RLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
RLEEACE+LDEMEAQGC+PDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD
Sbjct: 421 RLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
Query: 481 VLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKFEEAITLLSLMKK 540
VLISGFLGQKK+DGAYQLLIELVNKAHLRPWQATYK LIEKLLEVRK EEAI+LL LMKK
Sbjct: 481 VLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKK 540
Query: 541 QNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEAKDL 600
QNYPPFPEPF+QYISKFGTVE+AAE LK LSSKEYPSMSAYLH+F SFFNEGR+SEAKDL
Sbjct: 541 QNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDL 600
Query: 601 LFKCPHHIRKHSEICKLFGSAESKS---TATTQSSSDQVGT 639
LFKCPHHIRKHSEICKLFGSAESKS T TTQSS + +GT
Sbjct: 601 LFKCPHHIRKHSEICKLFGSAESKSTTTTTTTQSSPNPIGT 634
BLAST of Lcy03g019850 vs. ExPASy TrEMBL
Match:
A0A6J1I0W9 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111468041 PE=4 SV=1)
HSP 1 Score: 1115.5 bits (2884), Expect = 0.0e+00
Identity = 570/643 (88.65%), Postives = 594/643 (92.38%), Query Frame = 0
Query: 1 MARRRAILTSLRLANSFFSTQFSSTRSLYPQVTQFSPSSSSLPNQSHFPLFTINHGILHF 60
MARR+AILTSL L NS F STRS Y QVT+F P SSL +QS FP FT NH IL F
Sbjct: 1 MARRKAILTSLMLENSLF-----STRSSYSQVTRFLP--SSLSHQSRFPPFTTNHRILFF 60
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SSKPHSLLELV ANDWSEILETELETLNPTLTHET+VYVLKRLDKEPQKASDFFNWACGK
Sbjct: 61 SSKPHSLLELVLANDWSEILETELETLNPTLTHETMVYVLKRLDKEPQKASDFFNWACGK 120
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
NG TQSS IYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD
Sbjct: 121 NGSTQSSPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
ATALTHFYNRMLQ+NAMD VVQKVV IVL SEWN++VAEKLEGLGIVLSDSFVIR LKEL
Sbjct: 181 ATALTHFYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRALKEL 240
Query: 241 RNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDID 300
RNFPLK LS FHWVG R DYDHNTVTYNAI RVLGRDDS+EAFWG+VEEMK AGHEIDID
Sbjct: 241 RNFPLKGLSFFHWVGCRSDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDID 300
Query: 301 TYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRSISASDNPDLSLVFRVAK 360
TYIKISRQFQR+KM+ DAV+LYELMMDGPYKPSLQDCS+LLRSISASDNPDLSLVFRVAK
Sbjct: 301 TYIKISRQFQRTKMIGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAK 360
Query: 361 KFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLCKAR 420
KFEATG SLSKA YDGIHRSLTSAGKFDEAENIVKS++NAGYEPDNVTYSQLVFGLCKAR
Sbjct: 361 KFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSLRNAGYEPDNVTYSQLVFGLCKAR 420
Query: 421 RLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
RLEEACE+LDEMEAQGC+PDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD
Sbjct: 421 RLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
Query: 481 VLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKFEEAITLLSLMKK 540
VLISGFLGQKK+DGAYQLLIELVNKAHLRPWQATYK LIEKLLEVRK EEAI+LLSLMKK
Sbjct: 481 VLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLSLMKK 540
Query: 541 QNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEAKDL 600
QNYPP PEPF+QYISKFGTVE+AAE LK LSSKEYPSMSAYLHIF SFFNEGR+SEAKDL
Sbjct: 541 QNYPPSPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHIFNSFFNEGRHSEAKDL 600
Query: 601 LFKCPHHIRKHSEICKLFGSAESKS-----TATTQSSSDQVGT 639
LFKCPHHIRKHSEICKLFGSAESKS T TTQSS + +GT
Sbjct: 601 LFKCPHHIRKHSEICKLFGSAESKSTTTTTTTTTQSSPNPIGT 636
BLAST of Lcy03g019850 vs. ExPASy TrEMBL
Match:
A0A6J1C114 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007295 PE=4 SV=1)
HSP 1 Score: 1103.2 bits (2852), Expect = 0.0e+00
Identity = 558/640 (87.19%), Postives = 594/640 (92.81%), Query Frame = 0
Query: 1 MARRRAILTSLRLANSFFSTQFSSTRSLYPQVTQFSPSSSSLPNQSHFPLFTINHGILHF 60
M RR AILTSLRLANSF S Q SSTRSLYPQVT+FSP+S S ++SHF F H +L F
Sbjct: 1 MTRRTAILTSLRLANSFLSAQISSTRSLYPQVTRFSPTSVS--HRSHFLDFKSTHPLLFF 60
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SSKPHSLL+ V ANDWS+ LE ELETLNPTLTHETVVYVLKRLDKEPQKAS FFNWACGK
Sbjct: 61 SSKPHSLLQFVLANDWSQDLENELETLNPTLTHETVVYVLKRLDKEPQKASGFFNWACGK 120
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLT+LG+L+RAKKAAD
Sbjct: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTMLGILRRAKKAAD 180
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
ATALTHFYNRMLQ+NAMD VVQKVV IVLGSEW+S+VAE LEGLGIVLSD+FVIR LKEL
Sbjct: 181 ATALTHFYNRMLQENAMDSVVQKVVNIVLGSEWSSDVAENLEGLGIVLSDNFVIRALKEL 240
Query: 241 RNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDID 300
RNFPLKALS FHWVG R D+DHNTVTYNAI RVLGRDDS+EAFWGVV+EMK AGHEIDID
Sbjct: 241 RNFPLKALSFFHWVGCRLDFDHNTVTYNAIARVLGRDDSIEAFWGVVDEMKNAGHEIDID 300
Query: 301 TYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRSISASDNPDLSLVFRVAK 360
TYIKISRQFQRSKMM +AV+LYELMMDGPY+PSLQDCS+LLRSISASDNPDLSLVFRVAK
Sbjct: 301 TYIKISRQFQRSKMMGEAVKLYELMMDGPYRPSLQDCSVLLRSISASDNPDLSLVFRVAK 360
Query: 361 KFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLCKAR 420
K+EATG SLSKA YDGIHRSLTSAGKFDEAENIVKSM+NAGYEPDNVTYSQLVFGLCKAR
Sbjct: 361 KYEATGYSLSKAIYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKAR 420
Query: 421 RLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
RLEEAC+LLDEMEA+GCIPDIKTWTILIQGHCT NEVDKALVCFAKMIE+NCDPDADLLD
Sbjct: 421 RLEEACKLLDEMEAEGCIPDIKTWTILIQGHCTTNEVDKALVCFAKMIERNCDPDADLLD 480
Query: 481 VLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKFEEAITLLSLMKK 540
VLI GFLGQ+K+DGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRK EEAITLL LMKK
Sbjct: 481 VLIDGFLGQRKLDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKLEEAITLLRLMKK 540
Query: 541 QNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEAKDL 600
QNYPPF EPF+ YISKFGTVE+AA+ LKVLSSKEYPS+SAYLH+F SFFNEGR SEAKDL
Sbjct: 541 QNYPPFSEPFVLYISKFGTVEDAADFLKVLSSKEYPSVSAYLHVFNSFFNEGRCSEAKDL 600
Query: 601 LFKCPHHIRKHSEICKLFGSAESKSTATTQSSSD--QVGT 639
LFKCPHHIRKHSE+CKLFGSAESKST T+SSS +VGT
Sbjct: 601 LFKCPHHIRKHSEVCKLFGSAESKSTDATKSSSKPLEVGT 638
BLAST of Lcy03g019850 vs. ExPASy TrEMBL
Match:
A0A0A0LNT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1)
HSP 1 Score: 1054.3 bits (2725), Expect = 2.1e-304
Identity = 532/638 (83.39%), Postives = 579/638 (90.75%), Query Frame = 0
Query: 1 MARRRAILTSLRLANSFFSTQFSSTRSLYPQVTQFSPSSSSLPNQSHFPLFTINHGILHF 60
M RR AI TSLRLANSFF STRS YPQVT+FSP SS + +QS FTINH +L F
Sbjct: 1 MTRRNAIFTSLRLANSFF-----STRSRYPQVTRFSP-SSYVSHQSLVSHFTINHPVLFF 60
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SS P SLL+LVS NDWSE+LETELETLNPTLTHETVVYVLKRLDK+PQKAS+FFNWA GK
Sbjct: 61 SSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGK 120
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
NG TQSSSIYS+LLRIFVQNESMK FWITLR+MKERGFYLDEETY TILGVL+++KKAAD
Sbjct: 121 NGSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAAD 180
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
AT LTHFYNRMLQ NAMD VVQKVV IVLGS+W+++V KLE LGI LSD+FVIRVLKEL
Sbjct: 181 ATGLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKEL 240
Query: 241 RNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDID 300
RN PLKALS FHWVG RPDYDHNTV+YNAI RVLGRDDS+EAFWGV+EEMK A HEIDID
Sbjct: 241 RNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDID 300
Query: 301 TYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRSISASDNPDLSLVFRVAK 360
TYIKISRQFQ+SKMM +AV+LYELMMDGPYKPSLQDCS+LLR+I+ASDNPDLSLV+RVAK
Sbjct: 301 TYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAK 360
Query: 361 KFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLCKAR 420
KFEATG SLSKA YDGIHRSLTS GKFD+AENIVKSM+NAGYEPDNVTYSQLVFGLCKAR
Sbjct: 361 KFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKAR 420
Query: 421 RLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
RLEEA ++LDEMEAQGCIPDIKTWTILIQGHC ANE+D ALVCFAKMIEKNCDPDADLLD
Sbjct: 421 RLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLD 480
Query: 481 VLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKFEEAITLLSLMKK 540
VLISGFL QKK++GAYQLLIEL NKAH+RPWQATYKQLI+ LLEVRK EEAI LL LMKK
Sbjct: 481 VLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKK 540
Query: 541 QNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEAKDL 600
QNYPPFPEPF+QYISKFGTV++A + LKVLSSKEYPS+SAYLHIF SFFNEGRYSEAKDL
Sbjct: 541 QNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDL 600
Query: 601 LFKCPHHIRKHSEICKLFGSAESKSTATTQSSSDQVGT 639
LFKCPHHIRKH+E+CKLFGSAES +TA TQSSS+ + T
Sbjct: 601 LFKCPHHIRKHNEVCKLFGSAESNTTAATQSSSNPIET 632
BLAST of Lcy03g019850 vs. ExPASy TrEMBL
Match:
A0A5D3BGX0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001060 PE=4 SV=1)
HSP 1 Score: 1040.4 bits (2689), Expect = 3.1e-300
Identity = 522/629 (82.99%), Postives = 573/629 (91.10%), Query Frame = 0
Query: 1 MARRRAILTSLRLANSFFSTQFSSTRSLYPQVTQFSPSSSSLPNQSHFPLFTINHGILHF 60
M RR AI TSLRLANSFF STRS YPQVT+FSP SS + +QS PLF INH +L F
Sbjct: 1 MTRRNAIFTSLRLANSFF-----STRSRYPQVTRFSP-SSYVSHQSLIPLFRINHPVLFF 60
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SS PHSLLELVS NDWSE+LETELETLNPTLTHETVVYVLKRLDK+PQKASDFFNWA GK
Sbjct: 61 SSNPHSLLELVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWASGK 120
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
NG TQSSSIYSILLRIFVQNESMK FWITLR+MKERGFYLDEETYLTILGVL++AKKAAD
Sbjct: 121 NGSTQSSSIYSILLRIFVQNESMKLFWITLRLMKERGFYLDEETYLTILGVLRKAKKAAD 180
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
ATAL HFYNRMLQ+NAMD VVQKVV IVLGS+W+++VA KLE LGI LSD+FVIRVLKEL
Sbjct: 181 ATALAHFYNRMLQENAMDSVVQKVVHIVLGSDWSNDVAGKLEELGIALSDNFVIRVLKEL 240
Query: 241 RNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDID 300
RN PLKALS F+WVG RPDYDHNTV+YNAI RVL R+DS++AFWGV+EEMK A +IDID
Sbjct: 241 RNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLDIDID 300
Query: 301 TYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRSISASDNPDLSLVFRVAK 360
TYIKISRQFQ+SKMM DAV+LYELMMDGPYKPSL DCS+LLR+I+ASDNPDLSLV+RVAK
Sbjct: 301 TYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAK 360
Query: 361 KFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLCKAR 420
KFEA+G SLSKA YDGIHRSLTS GKFD+AE+IVKSM+NAGYEPDNVT+SQLVFGLCKAR
Sbjct: 361 KFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKAR 420
Query: 421 RLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
RL+EA E+LDEMEAQGCIPDIKTWT+LIQGHC AN++D ALVCFAKMIEKNCDPDADLLD
Sbjct: 421 RLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLD 480
Query: 481 VLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKFEEAITLLSLMKK 540
VLI+GFL QKK+DGAYQLLIEL NKAH+RPWQATYK LI+ LLEVRK EEA+ LL LMKK
Sbjct: 481 VLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKK 540
Query: 541 QNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEAKDL 600
QNYPPFPEPF+QYISKFGTV++A + LKVLSSKEYPS+SAYLHIF SFFNEGRYSEAKDL
Sbjct: 541 QNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDL 600
Query: 601 LFKCPHHIRKHSEICKLFGSAESKSTATT 630
LFKCPHHIRKH+E+CKLFGSAESK+T T
Sbjct: 601 LFKCPHHIRKHNEVCKLFGSAESKTTGAT 623
BLAST of Lcy03g019850 vs. NCBI nr
Match:
XP_023530746.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1124.0 bits (2906), Expect = 0.0e+00
Identity = 574/644 (89.13%), Postives = 597/644 (92.70%), Query Frame = 0
Query: 1 MARRRAILTSLRLANSFFSTQFSSTRSLYPQVTQFSPSSSSLPNQSHFPLFTINHGILHF 60
MARR+AILTSL LANS F STRS + QVT+F P SSL +QS FP FT NH I+ F
Sbjct: 1 MARRKAILTSLTLANSLF-----STRSSHSQVTRFLP--SSLSHQSRFPPFTTNHRIMFF 60
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SSKPHSLLELV ANDWSEILETELETLNPTLTHET+VYVLKRLDKEPQKASDFFNWACGK
Sbjct: 61 SSKPHSLLELVLANDWSEILETELETLNPTLTHETMVYVLKRLDKEPQKASDFFNWACGK 120
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
NG TQSS IYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD
Sbjct: 121 NGSTQSSPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
ATALTHFYNRMLQ+NAMD VVQKVV IVL SEWN++VAEKLEGLGIVLSDSFVIRVLKEL
Sbjct: 181 ATALTHFYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKEL 240
Query: 241 RNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDID 300
RNFPLK LS FHWVG RPDYDHNTVTYNAI RVLGRDDS+EAFWG+VEEMK AGHEIDID
Sbjct: 241 RNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDID 300
Query: 301 TYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRSISASDNPDLSLVFRVAK 360
TYIKISRQFQRSKMM DAV+LYELMMDGPYKPSLQDCS+LLRSISASDNPDLSLVFRVAK
Sbjct: 301 TYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAK 360
Query: 361 KFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLCKAR 420
KFEATG SLSKA YDGIHRSLTSAGKFDEAENIVKSM+NAGYEPDNVTYSQLVFGLCKAR
Sbjct: 361 KFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKAR 420
Query: 421 RLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
RLEEACE+LDEMEAQGC+PDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD
Sbjct: 421 RLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
Query: 481 VLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKFEEAITLLSLMKK 540
VLISGFLGQKK+DGAYQLLIELVNKAHLRPWQATYK LIEKLLEVRK EEAI+LL LMKK
Sbjct: 481 VLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKK 540
Query: 541 QNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEAKDL 600
QNYPPFPEPF+QYISKFGTVE+AAE LK LSSKEYPSMSAYLHIF SFFNEGR+SEAKDL
Sbjct: 541 QNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHIFNSFFNEGRHSEAKDL 600
Query: 601 LFKCPHHIRKHSEICKLFGSAESKS------TATTQSSSDQVGT 639
LFKCPHHIRKHSEICKLFGSAESKS T TTQSS + +GT
Sbjct: 601 LFKCPHHIRKHSEICKLFGSAESKSTTPTTTTTTTQSSPNPIGT 637
BLAST of Lcy03g019850 vs. NCBI nr
Match:
XP_022933685.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 571/641 (89.08%), Postives = 595/641 (92.82%), Query Frame = 0
Query: 1 MARRRAILTSLRLANSFFSTQFSSTRSLYPQVTQFSPSSSSLPNQSHFPLFTINHGILHF 60
MARR+AILTSL LANS + STRS Y QVT+F P SSL +QS FP FT NH IL F
Sbjct: 1 MARRKAILTSLTLANSLY-----STRSCYSQVTRFLP--SSLSHQSRFPPFTTNHRILFF 60
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SSKPHSLLELV ANDWSE LETELETLNPTLTHET+VYVLKRLDKEPQKASDFF+WACGK
Sbjct: 61 SSKPHSLLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGK 120
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
NG TQSS IYSILLRI VQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD
Sbjct: 121 NGSTQSSPIYSILLRIVVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
ATALTHFYNRMLQ+NAMD VVQKVV IVL SEWN++VAEKLEGLGIVLSDSFVIRVLKEL
Sbjct: 181 ATALTHFYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKEL 240
Query: 241 RNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDID 300
RNFPLK LS FHWVG RPDYDHNTVTYNAI RVLGRDDS+EAFWG+VEEMK AGHEIDID
Sbjct: 241 RNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDID 300
Query: 301 TYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRSISASDNPDLSLVFRVAK 360
TYIKISRQFQRSKMM DAV+LYELMMDGPYKPSLQDCS+LLRSISASDNPDLSLVFRVAK
Sbjct: 301 TYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAK 360
Query: 361 KFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLCKAR 420
KFEATG SLSKA YDGIHRSLTSAGKFDEAENIVKSM+NAGYEPDNVTYSQLVFGLCKAR
Sbjct: 361 KFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKAR 420
Query: 421 RLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
RLEEACE+LDEMEAQGC+PDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD
Sbjct: 421 RLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
Query: 481 VLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKFEEAITLLSLMKK 540
VLISGFLGQKK+DGAYQLLIELVNKAHLRPWQATYK LIEKLLEVRK EEAI+LL LMKK
Sbjct: 481 VLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKK 540
Query: 541 QNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEAKDL 600
QNYPPFPEPF+QYISKFGTVE+AAE LK LSSKEYPSMSAYLH+F SFFNEGR+SEAKDL
Sbjct: 541 QNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDL 600
Query: 601 LFKCPHHIRKHSEICKLFGSAESKS---TATTQSSSDQVGT 639
LFKCPHHIRKHSEICKLFGSAESKS T TTQSS + +GT
Sbjct: 601 LFKCPHHIRKHSEICKLFGSAESKSTTTTTTTQSSPNPIGT 634
BLAST of Lcy03g019850 vs. NCBI nr
Match:
KAG6587441.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1117.4 bits (2889), Expect = 0.0e+00
Identity = 570/642 (88.79%), Postives = 594/642 (92.52%), Query Frame = 0
Query: 1 MARRRAILTSLRLANSFFSTQFSSTRSLYPQVTQFSPSSSSLPNQSHFPLFTINHGILHF 60
MARR+AILTSL LANS + STRS Y QVT+F P SSL +QS FP FT N IL F
Sbjct: 1 MARRKAILTSLTLANSLY-----STRSCYSQVTRFLP--SSLSHQSRFPPFTTNRRILFF 60
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SSKPHSLLELV ANDWSE LE ELETLNPTLTHET+VYVLKRLDKEPQKASDFF+WACGK
Sbjct: 61 SSKPHSLLELVLANDWSETLEAELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGK 120
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
NG TQSS IYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD
Sbjct: 121 NGSTQSSPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
ATALTHFYNRMLQ+NAMD VVQKVV IVL SEWN++VAEKLEGLGIVLSDSFVIRVLKEL
Sbjct: 181 ATALTHFYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKEL 240
Query: 241 RNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDID 300
RNFPLK LS FHWVG RPDYDHNTVTYNAI RVLGRDDS+EAFWG+VEEMK AGHEIDID
Sbjct: 241 RNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDID 300
Query: 301 TYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRSISASDNPDLSLVFRVAK 360
TYIKISRQFQRSKMM DAV+LYELMMDGPYKPSLQDCS+LLRSISASDNPDLSLVFRVAK
Sbjct: 301 TYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAK 360
Query: 361 KFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLCKAR 420
KFEATG SLSKA YDGIHRSLTSAGKFDEAENIVKSM+NAGYEPDNVTYSQLVFGLCKAR
Sbjct: 361 KFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKAR 420
Query: 421 RLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
RLEEACE+LDEMEAQGC+PDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD
Sbjct: 421 RLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
Query: 481 VLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKFEEAITLLSLMKK 540
VLISGFLGQKK+DGAYQLLIELVNKAHLRPWQATYK LIEKLLEVRK EEAI+LL LMKK
Sbjct: 481 VLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKK 540
Query: 541 QNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEAKDL 600
QNYPPFPEPF+QYISKFGTVE+AAE LK LSSKEYPSMSAYLH+F SFFNEGR+SEAKDL
Sbjct: 541 QNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDL 600
Query: 601 LFKCPHHIRKHSEICKLFGSAESKS----TATTQSSSDQVGT 639
LFKCPHHIRKHSEICKLFGSAESKS T TTQSS + +GT
Sbjct: 601 LFKCPHHIRKHSEICKLFGSAESKSTTPTTTTTQSSPNPIGT 635
BLAST of Lcy03g019850 vs. NCBI nr
Match:
KAG7021423.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1117.4 bits (2889), Expect = 0.0e+00
Identity = 571/645 (88.53%), Postives = 595/645 (92.25%), Query Frame = 0
Query: 1 MARRRAILTSLRLANSFFSTQFSSTRSLYPQVTQFSPSSSSLPNQSHFPLFTINHGILHF 60
MARR+AILTSL LANS + STRS Y QVT+F P SSL +QS FP FT N IL F
Sbjct: 1 MARRKAILTSLTLANSLY-----STRSCYSQVTRFLP--SSLSHQSRFPPFTTNPRILFF 60
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SSKPHSLLELV ANDWSE LETELETLNPTLTHET+VYVLKRLDKEPQKASDFF+WACGK
Sbjct: 61 SSKPHSLLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGK 120
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
NG TQSS IYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD
Sbjct: 121 NGSTQSSPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
ATALTHFYNRMLQ+NAMD VVQKVV IVL SEWN++VAEKLEGLGIVLSDSFVIRVLKEL
Sbjct: 181 ATALTHFYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKEL 240
Query: 241 RNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDID 300
RNFPLK LS FHWVG RPDYDHNTVTYNAI RVLGRDDS+EAFWG+VEEMK AGHEIDID
Sbjct: 241 RNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDID 300
Query: 301 TYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRSISASDNPDLSLVFRVAK 360
TYIKISRQFQRSKMM DAV+LYELMMDGPYKPSLQDCS+LLRSISASDNPDLSLVFRVAK
Sbjct: 301 TYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAK 360
Query: 361 KFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLCKAR 420
KFEATG SLSKA YDGIHRSLTSAGKFDEAENIVKSM+NAGYEPDNVTYSQLVFGLCKAR
Sbjct: 361 KFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKAR 420
Query: 421 RLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
RLEEACE+LDEMEAQGC+PDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD
Sbjct: 421 RLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
Query: 481 VLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKFEEAITLLSLMKK 540
VLISGFLGQKK+DGAYQLLIELVNKAHLRPWQATYK LIEKLLEVRK EEAI+LL LMKK
Sbjct: 481 VLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKK 540
Query: 541 QNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEAKDL 600
QNYPPFPEPF+QYISKFGTVE+AAE LK LSSKEYPSMSAYLH+F SFFNEGR+SEAKDL
Sbjct: 541 QNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDL 600
Query: 601 LFKCPHHIRKHSEICKLFGSAESKS-------TATTQSSSDQVGT 639
LFKCPHHIRKHSEICKLFGSAESKS T TTQSS + +GT
Sbjct: 601 LFKCPHHIRKHSEICKLFGSAESKSTTPTTTTTTTTQSSPNPIGT 638
BLAST of Lcy03g019850 vs. NCBI nr
Match:
XP_022968869.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita maxima])
HSP 1 Score: 1115.5 bits (2884), Expect = 0.0e+00
Identity = 570/643 (88.65%), Postives = 594/643 (92.38%), Query Frame = 0
Query: 1 MARRRAILTSLRLANSFFSTQFSSTRSLYPQVTQFSPSSSSLPNQSHFPLFTINHGILHF 60
MARR+AILTSL L NS F STRS Y QVT+F P SSL +QS FP FT NH IL F
Sbjct: 1 MARRKAILTSLMLENSLF-----STRSSYSQVTRFLP--SSLSHQSRFPPFTTNHRILFF 60
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SSKPHSLLELV ANDWSEILETELETLNPTLTHET+VYVLKRLDKEPQKASDFFNWACGK
Sbjct: 61 SSKPHSLLELVLANDWSEILETELETLNPTLTHETMVYVLKRLDKEPQKASDFFNWACGK 120
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
NG TQSS IYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD
Sbjct: 121 NGSTQSSPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
ATALTHFYNRMLQ+NAMD VVQKVV IVL SEWN++VAEKLEGLGIVLSDSFVIR LKEL
Sbjct: 181 ATALTHFYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRALKEL 240
Query: 241 RNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDID 300
RNFPLK LS FHWVG R DYDHNTVTYNAI RVLGRDDS+EAFWG+VEEMK AGHEIDID
Sbjct: 241 RNFPLKGLSFFHWVGCRSDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDID 300
Query: 301 TYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRSISASDNPDLSLVFRVAK 360
TYIKISRQFQR+KM+ DAV+LYELMMDGPYKPSLQDCS+LLRSISASDNPDLSLVFRVAK
Sbjct: 301 TYIKISRQFQRTKMIGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAK 360
Query: 361 KFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLCKAR 420
KFEATG SLSKA YDGIHRSLTSAGKFDEAENIVKS++NAGYEPDNVTYSQLVFGLCKAR
Sbjct: 361 KFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSLRNAGYEPDNVTYSQLVFGLCKAR 420
Query: 421 RLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
RLEEACE+LDEMEAQGC+PDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD
Sbjct: 421 RLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLD 480
Query: 481 VLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKFEEAITLLSLMKK 540
VLISGFLGQKK+DGAYQLLIELVNKAHLRPWQATYK LIEKLLEVRK EEAI+LLSLMKK
Sbjct: 481 VLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLSLMKK 540
Query: 541 QNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEAKDL 600
QNYPP PEPF+QYISKFGTVE+AAE LK LSSKEYPSMSAYLHIF SFFNEGR+SEAKDL
Sbjct: 541 QNYPPSPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHIFNSFFNEGRHSEAKDL 600
Query: 601 LFKCPHHIRKHSEICKLFGSAESKS-----TATTQSSSDQVGT 639
LFKCPHHIRKHSEICKLFGSAESKS T TTQSS + +GT
Sbjct: 601 LFKCPHHIRKHSEICKLFGSAESKSTTTTTTTTTQSSPNPIGT 636
BLAST of Lcy03g019850 vs. TAIR 10
Match:
AT3G48250.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 709.1 bits (1829), Expect = 3.1e-204
Identity = 362/624 (58.01%), Postives = 467/624 (74.84%), Query Frame = 0
Query: 1 MARRRAILTSLRLANSFFSTQFSSTRSLYPQVTQFSPSSSSLPNQSHFPLFTINHGILHF 60
M R AIL+SLR A S ST+ +RS +V S SS L + + P + F
Sbjct: 1 MYRSMAILSSLRHAYSQISTRSYLSRS---KVGFSSNLSSPLDSFAIVPSRFL-WKFRTF 60
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SSKP S+L+LV NDWS+ +E L + +LTHET +YVL++L+K P+KA F +W
Sbjct: 61 SSKPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRD 120
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
+G + S+ +YSI+LRI VQ SMK+FW+TLR MK+ GFYLDE+TY TI G L + K AD
Sbjct: 121 SGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKAD 180
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
A A+ HFY RML++NAM V +V +V +W+ V +L+ + +VLSD+FVIRVLKEL
Sbjct: 181 AVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKEL 240
Query: 241 RNFPLKALSLFHWV---GRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEI 300
R PLKAL+ FHWV G Y H+TVTYNA RVL R +SV FW VV+EMK AG+++
Sbjct: 241 REHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDM 300
Query: 301 DIDTYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRSISASDNPDLSLVFR 360
D+DTYIK+SRQFQ+S+MMA+ V+LYE MMDGP+KPS+QDCSLLLR +S S NPDL LVFR
Sbjct: 301 DLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFR 360
Query: 361 VAKKFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLC 420
V++K+E+TG SLSKA YDGIHRSLTS G+FDEAE I K+M+NAGYEPDN+TYSQLVFGLC
Sbjct: 361 VSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLC 420
Query: 421 KARRLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDAD 480
KA+RLEEA +LD+MEAQGC PDIKTWTILIQGHC NE+DKAL CFA M+EK D D++
Sbjct: 421 KAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSN 480
Query: 481 LLDVLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKFEEAITLLSL 540
LLDVLI GF+ K +GA L+E+V A+++PWQ+TYK LI+KLL+++K EEA+ LL +
Sbjct: 481 LLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQM 540
Query: 541 MKKQNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEA 600
MKKQNYP + E F Y++KFGT+E+A + L VLSSK+ PS +AY H+ ++F+ EGR ++A
Sbjct: 541 MKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDA 600
Query: 601 KDLLFKCPHHIRKHSEICKLFGSA 622
K+LLF CPHH + H +I +LFG+A
Sbjct: 601 KNLLFICPHHFKTHPKISELFGAA 620
BLAST of Lcy03g019850 vs. TAIR 10
Match:
AT3G02490.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 313.9 bits (803), Expect = 2.9e-85
Identity = 178/562 (31.67%), Postives = 302/562 (53.74%), Query Frame = 0
Query: 67 LLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGKNGFTQS 126
++++ S + + + EL++ + ++HE + VL+ L+ P A FF W S
Sbjct: 84 VIDVFSRLNGKDEITKELDSNDVVISHELALRVLRELESSPDVAGRFFKWGLEAYPQKLS 143
Query: 127 SSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 186
S Y+ +LRIF N + +FW + MK++G + + K+ D L
Sbjct: 144 SKSYNTMLRIFGVNGLVDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGLENDLERLKE 203
Query: 187 FYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 246
+ DN++D V +V IV+ W ++V ++L L + V VL++L P K
Sbjct: 204 LFASGSMDNSVDKVCNRVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRK 263
Query: 247 ALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDIDTYIKIS 306
AL F W+ + H+ TYNA+ RVLG++ ++ F ++EE++ AG+E++++TY+++S
Sbjct: 264 ALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVS 323
Query: 307 RQFQRSKMMADAVRLYELMMDGPYK--PSLQDCSLLLRSISASDNPDLSLVFRVAKKFEA 366
+F ++KM+ +AV L+E M G P+ CSLLL+ I + D+ L R K +
Sbjct: 324 ARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTG 383
Query: 367 TGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLCKARRLEE 426
GN + + +SL S +F ++ ++K+M GY P S + GL + + +E
Sbjct: 384 NGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDE 443
Query: 427 ACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDAD-LLDVLI 486
A EL++ MEA G D K L++GHC A ++++A CF KMI K A + L+
Sbjct: 444 ANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLV 503
Query: 487 SGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVR-----KFEEAITLLSLM 546
+ + Y+L ELV + L+PW +TYK ++ LL + FEEA++LL +M
Sbjct: 504 LAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMM 563
Query: 547 KKQNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNEGRYSEAK 606
+ +PPF +PF+ Y+S GT A LK ++SK++PS S L +F++ R+SEA+
Sbjct: 564 RNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQ 623
Query: 607 DLLFKCPHHIRKHSEICKLFGS 621
DLL P +IR+++E+ +LF +
Sbjct: 624 DLLSMSPSYIRRNAEVLELFNT 645
BLAST of Lcy03g019850 vs. TAIR 10
Match:
AT5G15980.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 307.4 bits (786), Expect = 2.7e-83
Identity = 174/576 (30.21%), Postives = 304/576 (52.78%), Query Frame = 0
Query: 61 SSKPHSLLELVSANDWSEILETELETLNPTLTHETVVYVLKRLDKEPQKASDFFNWACGK 120
SS +++++ S + + ELE+ ++ + + VL++L+ P A FF W
Sbjct: 84 SSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEA 143
Query: 121 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAAD 180
+ SS Y+++LRI N + +FW + VMK++G L + ++ +D
Sbjct: 144 SPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESD 203
Query: 181 ATALTHFYNRMLQDNAMDGVVQKVVGIVLGSEWNSNVAEKLEGLGIVLSDSFVIRVLKEL 240
L + DN+ + V +V IV+ EW +V +++ L + V +++ L
Sbjct: 204 LLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERL 263
Query: 241 RNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFWGVVEEMKKAGHEIDID 300
P KAL F W+ + H+ TYNA+ RVLG++ ++ F +V EM+ AG+E++I+
Sbjct: 264 DVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIE 323
Query: 301 TYIKISRQFQRSKMMADAVRLYELMMDG---PYKPSLQDCSLLLRSISASDNPDLSLVFR 360
TY+++S +F ++K++ +AV L+E+ M G P+ LLL+ I + D+ L R
Sbjct: 324 TYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSR 383
Query: 361 VAKKFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAGYEPDNVTYSQLVFGLC 420
K + GN+L+ + + +SL S + +++ ++K MK GY P S + L
Sbjct: 384 AVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLS 443
Query: 421 KARRLEEACELLDEMEAQGCIPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDAD 480
+ + +EA E +D ME+ G D K L++G+C + +D+ALVCF KM+ AD
Sbjct: 444 RKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYAD 503
Query: 481 L-LDVLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVR-----KFEEA 540
+ L+ + + ++ AY+LL V K L+P +TYK L+ LL + FEEA
Sbjct: 504 YSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEA 563
Query: 541 ITLLSLMKKQNYPPFPEPFIQYISKFGTVENAAELLKVLSSKEYPSMSAYLHIFKSFFNE 600
++LL +MK +PPF +PF+ Y S G A LK ++S +P +S L +F++
Sbjct: 564 LSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKS 623
Query: 601 GRYSEAKDLLFKCPHHIRKHSEICKLFGSAESKSTA 628
R+SEA+DLL CP++IR + ++ +LF + + +A
Sbjct: 624 ARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNESA 659
BLAST of Lcy03g019850 vs. TAIR 10
Match:
AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 137.1 bits (344), Expect = 4.9e-32
Identity = 102/381 (26.77%), Postives = 178/381 (46.72%), Query Frame = 0
Query: 225 GIVLSDSFVIRVLKELRNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLGRDDSVEAFW 284
GI L +IRVL + F W ++P Y H+ ++ +L + A W
Sbjct: 92 GIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVW 151
Query: 285 GVVEEMKKAGHE-IDIDTYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQDCSLLLRS 344
G++EEM+K E I+ + ++ + R+F + M+ AV + + M +P LL +
Sbjct: 152 GLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDA 211
Query: 345 ISASDN-PDLSLVFR-VAKKFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVKSMKNAG 404
+ + + + S VF + +KF + Y GK EA+ ++ MK AG
Sbjct: 212 LCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCRE-----GKLMEAKEVLVQMKEAG 271
Query: 405 YEPDNVTYSQLVFGLCKARRLEEACELLDEMEAQGCIPDIKTWTILIQGHC-TANEVDKA 464
EPD V ++ L+ G A ++ +A +L+++M +G P++ +T+LIQ C T +D+A
Sbjct: 272 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 331
Query: 465 LVCFAKMIEKNCDPDADLLDVLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATYKQLIE 524
+ F +M C+ D LISGF ID Y +L ++ K + P Q TY Q++
Sbjct: 332 MRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM-RKKGVMPSQVTYMQIMV 391
Query: 525 KLLEVRKFEEAITLLSLMKKQNYPP---FPEPFIQYISKFGTVENAAELLKVLSSKEY-P 584
+ +FEE + L+ MK++ P I+ K G V+ A L + + P
Sbjct: 392 AHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSP 451
Query: 585 SMSAYLHIFKSFFNEGRYSEA 598
+ ++ + F ++G EA
Sbjct: 452 GVDTFVIMINGFTSQGFLIEA 466
BLAST of Lcy03g019850 vs. TAIR 10
Match:
AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 136.3 bits (342), Expect = 8.3e-32
Identity = 98/386 (25.39%), Postives = 179/386 (46.37%), Query Frame = 0
Query: 216 NVAEKLEGLGIVLSDSFVIRVLKELRNFPLKALSLFHWVGRRPDYDHNTVTYNAITRVLG 275
N+ L+ + + LS ++ VL+ R+ A F W R + H++ TYN++ +L
Sbjct: 147 NMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILA 206
Query: 276 RDDSVEAFWGVVEEMKKAGHEIDIDTYIKISRQFQRSKMMADAVRLYELMMDGPYKPSLQ 335
+ E V+EEM G + ++T+ + F +K AV ++ELM +K ++
Sbjct: 207 KTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVE 266
Query: 336 DCSLLLRSISASDNPDLSLVFRVAKKFEATGNSLSKATYDGIHRSLTSAGKFDEAENIVK 395
+ LL S+ + + V K T N + TY + EA I
Sbjct: 267 TINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMM---TYTVLLNGWCRVRNLIEAARIWN 326
Query: 396 SMKNAGYEPDNVTYSQLVFGLCKARRLEEACELLDEMEAQGCIPDIKTWTILIQGHCTAN 455
M + G +PD V ++ ++ GL ++R+ +A +L M+++G P+++++TI+I+ C +
Sbjct: 327 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 386
Query: 456 EVDKALVCFAKMIEKNCDPDADLLDVLISGFLGQKKIDGAYQLLIELVNKAHLRPWQATY 515
++ A+ F M++ PDA + LI+GF QKK+D Y+LL E+ K H P TY
Sbjct: 387 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH-PPDGKTY 446
Query: 516 KQLIEKLLEVRKFEEAITLLSLMKKQNYPPFPEPFIQYISKFGTVEN----AAELLKVLS 575
LI+ + + E A + + M + P F + + N A +++
Sbjct: 447 NALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIK 506
Query: 576 SKEYPSMSAYLHIFKSFFNEGRYSEA 598
P ++Y + + EG+ EA
Sbjct: 507 KGICPDDNSYTVLIRGLIGEGKSREA 527
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9STK5 | 4.4e-203 | 58.01 | Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidop... | [more] |
Q9M891 | 4.1e-84 | 31.67 | Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidop... | [more] |
Q8LPF1 | 3.8e-82 | 30.21 | Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidop... | [more] |
P0C8A0 | 6.9e-31 | 26.77 | Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX... | [more] |
Q9LZP3 | 1.2e-30 | 25.39 | Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1F5I7 | 0.0e+00 | 89.08 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbit... | [more] |
A0A6J1I0W9 | 0.0e+00 | 88.65 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbit... | [more] |
A0A6J1C114 | 0.0e+00 | 87.19 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Momordic... | [more] |
A0A0A0LNT7 | 2.1e-304 | 83.39 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1 | [more] |
A0A5D3BGX0 | 3.1e-300 | 82.99 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
XP_023530746.1 | 0.0e+00 | 89.13 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... | [more] |
XP_022933685.1 | 0.0e+00 | 89.08 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... | [more] |
KAG6587441.1 | 0.0e+00 | 88.79 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
KAG7021423.1 | 0.0e+00 | 88.53 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022968869.1 | 0.0e+00 | 88.65 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
AT3G48250.1 | 3.1e-204 | 58.01 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G02490.1 | 2.9e-85 | 31.67 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G15980.1 | 2.7e-83 | 30.21 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G49730.1 | 4.9e-32 | 26.77 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G62470.1 | 8.3e-32 | 25.39 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |