Lcy03g019470 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGACGCCTTGCTCAGATCTGTCTACCACGGCTGCATCGCCGGCTGCGACGCCGAGATCGACCGCCGTCCTTACCACAAGAACTGCGGCTGCGCTCTTCACGACCGAGATGCCCGACGCTGCTCGCACGCCATGTCCAAGCACAACACCGTCTCGTATCCGATCAGACGGGCCTGGAGTGAGGGCTGCTTGGCTATGGCTGCTGCTTCTGGTTCTGGCATTTCTTCTCCCTCTTCTTCCCCGTCCACGGACTACGAAAGCCTTGGATCTAACCGGAGATGA ATGGCCGACGCCTTGCTCAGATCTGTCTACCACGGCTGCATCGCCGGCTGCGACGCCGAGATCGACCGCCGTCCTTACCACAAGAACTGCGGCTGCGCTCTTCACGACCGAGATGCCCGACGCTGCTCGCACGCCATGTCCAAGCACAACACCGTCTCGTATCCGATCAGACGGGCCTGGAGTGAGGGCTGCTTGGCTATGGCTGCTGCTTCTGGTTCTGGCATTTCTTCTCCCTCTTCTTCCCCGTCCACGGACTACGAAAGCCTTGGATCTAACCGGAGATGA ATGGCCGACGCCTTGCTCAGATCTGTCTACCACGGCTGCATCGCCGGCTGCGACGCCGAGATCGACCGCCGTCCTTACCACAAGAACTGCGGCTGCGCTCTTCACGACCGAGATGCCCGACGCTGCTCGCACGCCATGTCCAAGCACAACACCGTCTCGTATCCGATCAGACGGGCCTGGAGTGAGGGCTGCTTGGCTATGGCTGCTGCTTCTGGTTCTGGCATTTCTTCTCCCTCTTCTTCCCCGTCCACGGACTACGAAAGCCTTGGATCTAACCGGAGATGA MADALLRSVYHGCIAGCDAEIDRRPYHKNCGCALHDRDARRCSHAMSKHNTVSYPIRRAWSEGCLAMAAASGSGISSPSSSPSTDYESLGSNRR Homology
BLAST of Lcy03g019470 vs. ExPASy TrEMBL
Match: A0A1S3B9X6 (uncharacterized protein LOC103487382 OS=Cucumis melo OX=3656 GN=LOC103487382 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.4e-31 Identity = 73/95 (76.84%), Postives = 78/95 (82.11%), Query Frame = 0
BLAST of Lcy03g019470 vs. ExPASy TrEMBL
Match: A0A0A0LWK0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265650 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 8.9e-31 Identity = 72/94 (76.60%), Postives = 77/94 (81.91%), Query Frame = 0
BLAST of Lcy03g019470 vs. ExPASy TrEMBL
Match: A0A061GQ94 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038276 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22 Identity = 57/82 (69.51%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Lcy03g019470 vs. ExPASy TrEMBL
Match: A0A6P5ZAR1 (uncharacterized protein LOC111299002 OS=Durio zibethinus OX=66656 GN=LOC111299002 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 2.0e-22 Identity = 56/82 (68.29%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Lcy03g019470 vs. ExPASy TrEMBL
Match: A0A1R3G2H0 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29274 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.4e-22 Identity = 56/82 (68.29%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Lcy03g019470 vs. NCBI nr
Match: KAG6587850.1 (hypothetical protein SDJN03_16415, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 169.9 bits (429), Expect = 1.1e-38 Identity = 83/94 (88.30%), Postives = 86/94 (91.49%), Query Frame = 0
BLAST of Lcy03g019470 vs. NCBI nr
Match: XP_008443899.1 (PREDICTED: uncharacterized protein LOC103487382 [Cucumis melo]) HSP 1 Score: 145.2 bits (365), Expect = 2.8e-31 Identity = 73/95 (76.84%), Postives = 78/95 (82.11%), Query Frame = 0
BLAST of Lcy03g019470 vs. NCBI nr
Match: KAE8653037.1 (hypothetical protein Csa_019637 [Cucumis sativus]) HSP 1 Score: 136.7 bits (343), Expect = 1.0e-28 Identity = 68/92 (73.91%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of Lcy03g019470 vs. NCBI nr
Match: XP_007013703.2 (PREDICTED: uncharacterized protein LOC18588916 [Theobroma cacao]) HSP 1 Score: 115.2 bits (287), Expect = 3.1e-22 Identity = 57/82 (69.51%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Lcy03g019470 vs. NCBI nr
Match: EOY31322.1 (Uncharacterized protein TCM_038276 [Theobroma cacao]) HSP 1 Score: 115.2 bits (287), Expect = 3.1e-22 Identity = 57/82 (69.51%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Lcy03g019470 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 4.0e-15 Identity = 44/97 (45.36%), Postives = 64/97 (65.98%), Query Frame = 0
BLAST of Lcy03g019470 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 4.0e-15 Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|