Lcy03g019380 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGACCGATTACACCACTGCCGAAGTTTACAGGTTCAAGTTTTCTAGGGTTTCCTGCTGCAATTTTTACCTCTATTCGCTCATCTCCTTTTCTCAAAATGGTGATTTTTCTTGCTTCATTGCGTTTGTTTCTTCCTTGTAATTTCCTTTATTTCTAGATTTGAAGTTCTTCGTTTCTTCTATCGTGATTGTGATGTGTAGCCGTCCCACAAAACCTTCATAATCAAGAAAAAGCTGGCGAAGAAGATGAGGCAGAACAGGCCCATTCCTCACTGGATTCGATTGAGAACTGACAACACGATAAGGTCCCCTTCAATTTTACTCATTTCATTACATGATTTCTTAGTGATTTCACGAATTAGAATTCTCATATGCCCTTTTCGTTCGTTTGAATCTCAGGTACAATGCCAAGCGTAGGCACTGGCGCCGCACGAAGCTTGGTTTCTAATTGGGAAAAACGAGTTTTTCTCTCTCTCTCTCTCTCTCTCTTTTGGGTCAAGTGTATGATAGATCTTTCCGAGACTTGACTTGACATTGTTAGGGTTCACTTCTTTTCATTATATCAATGAGAAGATTGTTTCCTGTCAAAAAAAAAATTGTTAGGGTTCATCATTTAGTTACAGCAAACTCGGATTTTGTTTTCTGATTGAAGTATGATGAGATTGTTGATTCATAATGAAGATTATCGTTCAAGAAGTAGTGTGATTTATTTTCTCTACAATGAAATTTGGGCAATGTCTCTGTCATTTTTATCTTTGCTTAGTTTGGTTTTTATTGAAGAACTAGAGTAGATGGAATGGGATATTTGGAAACTGAGAACTGAGAACATATGCAGGAGCAGTATATTGATTAATCTTTTCAGTTGCGTTGTTAGAAGGAAATCTCTGTCTTCTTTCTTGAGATTGGACTTTCAAGAAGGGCAATGAAGATCAGCTAGTTGTGCTCCATTGCTGTCCATGGAATTTGATTAGTCTTCGGATTTGAAGGCAATGAAATGTGGTGATTCCAAGCATGTGCAGTGTTCTTTTGGTGACTGAGTTAGTTTGTTTGATATAATGATGTTAGGAATATATAATAAAAGGGTTTTGTGTGAAAGAAATCTCAATGTAAATTAGTACTTGAGGAAGAAATCATAGAATGTTGAATGCTTTACAATTTATCAGGGAATAATGTTTCTTGTTTAATGAAAAATTCAAAGAGAGGTC AAGACCGATTACACCACTGCCGAAGTTTACAGGTTCAAGTTTTCTAGGGTTTCCTGCTGCAATTTTTACCTCTATTCGCTCATCTCCTTTTCTCAAAATGCCGTCCCACAAAACCTTCATAATCAAGAAAAAGCTGGCGAAGAAGATGAGGCAGAACAGGCCCATTCCTCACTGGATTCGATTGAGAACTGACAACACGATAAGGTACAATGCCAAGCGTAGGCACTGGCGCCGCACGAAGCTTGGTTTCTAATTGGGAAAAACGAGTTTTTCTCTCTCTCTCTCTCTCTCTCTTTTGGGTCAAGTGTATGATAGATCTTTCCGAGACTTGACTTGACATTGTTAGGGTTCACTTCTTTTCATTATATCAATGAGAAGATTGTTTCCTGTCAAAAAAAAAATTGTTAGGGTTCATCATTTAGTTACAGCAAACTCGGATTTTGTTTTCTGATTGAAGTATGATGAGATTGTTGATTCATAATGAAGATTATCGTTCAAGAAGTAGTGTGATTTATTTTCTCTACAATGAAATTTGGGCAATGTCTCTGTCATTTTTATCTTTGCTTAGTTTGGTTTTTATTGAAGAACTAGAGTAGATGGAATGGGATATTTGGAAACTGAGAACTGAGAACATATGCAGGAGCAGTATATTGATTAATCTTTTCAGTTGCGTTGTTAGAAGGAAATCTCTGTCTTCTTTCTTGAGATTGGACTTTCAAGAAGGGCAATGAAGATCAGCTAGTTGTGCTCCATTGCTGTCCATGGAATTTGATTAGTCTTCGGATTTGAAGGCAATGAAATGTGGTGATTCCAAGCATGTGCAGTGTTCTTTTGGTGACTGAGTTAGTTTGTTTGATATAATGATGTTAGGAATATATAATAAAAGGGTTTTGTGTGAAAGAAATCTCAATGTAAATTAGTACTTGAGGAAGAAATCATAGAATGTTGAATGCTTTACAATTTATCAGGGAATAATGTTTCTTGTTTAATGAAAAATTCAAAGAGAGGTC ATGCCGTCCCACAAAACCTTCATAATCAAGAAAAAGCTGGCGAAGAAGATGAGGCAGAACAGGCCCATTCCTCACTGGATTCGATTGAGAACTGACAACACGATAAGGTACAATGCCAAGCGTAGGCACTGGCGCCGCACGAAGCTTGGTTTCTAA MPSHKTFIIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF Homology
BLAST of Lcy03g019380 vs. ExPASy Swiss-Prot
Match: P51424 (60S ribosomal protein L39-1 OS=Arabidopsis thaliana OX=3702 GN=RPL39A PE=3 SV=2) HSP 1 Score: 105.1 bits (261), Expect = 2.3e-22 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of Lcy03g019380 vs. ExPASy Swiss-Prot
Match: Q6KAJ8 (60S ribosomal protein L39-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39A PE=3 SV=2) HSP 1 Score: 103.6 bits (257), Expect = 6.7e-22 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of Lcy03g019380 vs. ExPASy Swiss-Prot
Match: P51426 (60S ribosomal protein L39-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39B PE=3 SV=2) HSP 1 Score: 103.6 bits (257), Expect = 6.7e-22 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of Lcy03g019380 vs. ExPASy Swiss-Prot
Match: Q5SMI4 (60S ribosomal protein L39-3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39C PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 6.7e-22 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of Lcy03g019380 vs. ExPASy Swiss-Prot
Match: P51425 (60S ribosomal protein L39 OS=Zea mays OX=4577 GN=RPL39 PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 6.7e-22 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of Lcy03g019380 vs. ExPASy TrEMBL
Match: A0A6P5T1X5 (60S ribosomal protein L39-1 OS=Prunus avium OX=42229 GN=LOC110762551 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 4.5e-21 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Lcy03g019380 vs. ExPASy TrEMBL
Match: A0A6J1C421 (60S ribosomal protein L39-1-like OS=Momordica charantia OX=3673 GN=LOC111007203 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 4.5e-21 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Lcy03g019380 vs. ExPASy TrEMBL
Match: A0A6J1HAJ4 (60S ribosomal protein L39-1 OS=Cucurbita moschata OX=3662 GN=LOC111462063 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 4.5e-21 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Lcy03g019380 vs. ExPASy TrEMBL
Match: A0A251RA49 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G390600 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 4.5e-21 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Lcy03g019380 vs. ExPASy TrEMBL
Match: A0A438KE59 (60S ribosomal protein L39-3 OS=Vitis vinifera OX=29760 GN=RPL39C_1 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 7.7e-21 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Lcy03g019380 vs. NCBI nr
Match: XP_020414429.1 (60S ribosomal protein L39-1 [Prunus persica] >XP_021820892.1 60S ribosomal protein L39-1 [Prunus avium] >XP_022135168.1 60S ribosomal protein L39-1-like [Momordica charantia] >XP_022961506.1 60S ribosomal protein L39-1 [Cucurbita moschata] >XP_023516431.1 60S ribosomal protein L39-1 [Cucurbita pepo subsp. pepo] >XP_034198821.1 60S ribosomal protein L39-1 [Prunus dulcis] >ONI32872.1 hypothetical protein PRUPE_1G390600 [Prunus persica]) HSP 1 Score: 109.4 bits (272), Expect = 9.4e-21 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Lcy03g019380 vs. NCBI nr
Match: XP_008220702.1 (PREDICTED: 60S ribosomal protein L39-1 [Prunus mume]) HSP 1 Score: 109.0 bits (271), Expect = 1.2e-20 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Lcy03g019380 vs. NCBI nr
Match: XP_002285383.1 (PREDICTED: 60S ribosomal protein L39 [Vitis vinifera] >XP_007011758.1 PREDICTED: 60S ribosomal protein L39 [Theobroma cacao] >XP_015577456.1 60S ribosomal protein L39 [Ricinus communis] >XP_015583470.1 60S ribosomal protein L39 [Ricinus communis] >XP_015884724.1 60S ribosomal protein L39 [Ziziphus jujuba] >XP_015893232.1 60S ribosomal protein L39 [Ziziphus jujuba] >XP_021277206.1 60S ribosomal protein L39 [Herrania umbratica] >XP_021615205.1 60S ribosomal protein L39 [Manihot esculenta] >XP_021634643.1 60S ribosomal protein L39 [Manihot esculenta] >XP_022730370.1 60S ribosomal protein L39-like [Durio zibethinus] >XP_022750305.1 60S ribosomal protein L39-like [Durio zibethinus] >XP_031256841.1 60S ribosomal protein L39 [Pistacia vera] >XP_031274686.1 60S ribosomal protein L39 [Pistacia vera] >XP_031279727.1 60S ribosomal protein L39 [Pistacia vera] >XP_031280458.1 60S ribosomal protein L39 [Pistacia vera] >XP_034682698.1 60S ribosomal protein L39-like [Vitis riparia] >XP_039131172.1 60S ribosomal protein L39 [Dioscorea cayenensis subsp. rotundata] >PIA63122.1 hypothetical protein AQUCO_00200862v1 [Aquilegia coerulea] >TXG60800.1 hypothetical protein EZV62_012163 [Acer yangbiense] >EOY29377.1 Ribosomal protein L39 family protein [Theobroma cacao] >OAY31791.1 hypothetical protein MANES_14G140700v8 [Manihot esculenta] >OAY46933.1 hypothetical protein MANES_06G039600v8 [Manihot esculenta]) HSP 1 Score: 108.6 bits (270), Expect = 1.6e-20 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Lcy03g019380 vs. NCBI nr
Match: CBI21094.3 (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 108.6 bits (270), Expect = 1.6e-20 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Lcy03g019380 vs. NCBI nr
Match: KAF8408226.1 (hypothetical protein HHK36_007371 [Tetracentron sinense]) HSP 1 Score: 108.6 bits (270), Expect = 1.6e-20 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Lcy03g019380 vs. TAIR 10
Match: AT4G31985.1 (Ribosomal protein L39 family protein ) HSP 1 Score: 105.1 bits (261), Expect = 1.6e-23 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of Lcy03g019380 vs. TAIR 10
Match: AT3G02190.1 (Ribosomal protein L39 family protein ) HSP 1 Score: 100.1 bits (248), Expect = 5.3e-22 Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 0
BLAST of Lcy03g019380 vs. TAIR 10
Match: AT2G25210.1 (Ribosomal protein L39 family protein ) HSP 1 Score: 90.9 bits (224), Expect = 3.2e-19 Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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