Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAAGGACCATTCATTTTTCTCCTTGTCTCCCTTCTTTGCCTTCTTCTCCTTCCATTTTGCCTATCTGAAACCAATTTCACCAACAAAGCTGAAGATCATTACAAGCAGCTGCAGCAGGGGAGGCCCAGAAAAGGTAGGAAATCTAACAATCTTTTTGAACTTGCAGTTAAAATACAGAGCTTGAGAAGAGCTTCTTGTGTTGTATCTGCAGATTTACAGGGCAGTGAACAAACAGATGCAGAGAAAGGACTAAGGAAATTTCGTTTCCGTAGTGGTGATGCAGTCGCGGTGGTGAGGAATATGAGAGCAAGAGGAGTTTACGGCGGTGCGAGTGACATGCGACGGGGGCGTTCGAAGAATGATGCTAACCCTATACGGATTAAATCGACTTCTTCACTGCTGTGGAAAGTTTCATGTGGTTTCTTTAGTTTCTGCCTTCTTCTTACAGGTTTTTAA
mRNA sequence
ATGAGGAAAGGACCATTCATTTTTCTCCTTGTCTCCCTTCTTTGCCTTCTTCTCCTTCCATTTTGCCTATCTGAAACCAATTTCACCAACAAAGCTGAAGATCATTACAAGCAGCTGCAGCAGGGGAGGCCCAGAAAAGATTTACAGGGCAGTGAACAAACAGATGCAGAGAAAGGACTAAGGAAATTTCGTTTCCGTAGTGGTGATGCAGTCGCGGTGGTGAGGAATATGAGAGCAAGAGGAGTTTACGGCGGTGCGAGTGACATGCGACGGGGGCGTTCGAAGAATGATGCTAACCCTATACGGATTAAATCGACTTCTTCACTGCTGTGGAAAGTTTCATGTGGTTTCTTTAGTTTCTGCCTTCTTCTTACAGGTTTTTAA
Coding sequence (CDS)
ATGAGGAAAGGACCATTCATTTTTCTCCTTGTCTCCCTTCTTTGCCTTCTTCTCCTTCCATTTTGCCTATCTGAAACCAATTTCACCAACAAAGCTGAAGATCATTACAAGCAGCTGCAGCAGGGGAGGCCCAGAAAAGATTTACAGGGCAGTGAACAAACAGATGCAGAGAAAGGACTAAGGAAATTTCGTTTCCGTAGTGGTGATGCAGTCGCGGTGGTGAGGAATATGAGAGCAAGAGGAGTTTACGGCGGTGCGAGTGACATGCGACGGGGGCGTTCGAAGAATGATGCTAACCCTATACGGATTAAATCGACTTCTTCACTGCTGTGGAAAGTTTCATGTGGTTTCTTTAGTTTCTGCCTTCTTCTTACAGGTTTTTAA
Protein sequence
MRKGPFIFLLVSLLCLLLLPFCLSETNFTNKAEDHYKQLQQGRPRKDLQGSEQTDAEKGLRKFRFRSGDAVAVVRNMRARGVYGGASDMRRGRSKNDANPIRIKSTSSLLWKVSCGFFSFCLLLTGF
Homology
BLAST of Lcy03g019040 vs. ExPASy TrEMBL
Match:
A0A6J1JM10 (uncharacterized protein LOC111485797 OS=Cucurbita maxima OX=3661 GN=LOC111485797 PE=4 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 2.5e-36
Identity = 85/126 (67.46%), Postives = 94/126 (74.60%), Query Frame = 0
Query: 1 MRKGPFIFLLVSLLCLLLLPFCLSETNFTNKAEDHYKQLQQGRPRKDLQGSEQTDAEKGL 60
MRKGPF+ LL+SLLCL LLPFCLSE FTNKA D YK L+QGRPRKDLQ SEQ +
Sbjct: 1 MRKGPFLLLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQASEQINVG--- 60
Query: 61 RKFRFRSGDAVAVVRNMRARGVYGGASDMRRGRSKNDANPIRIKSTSSLLWKVSCGFFSF 120
A R MRARGVYGG +D+ RG SKNDANP+RIKSTSSLLW+VSCGFFS
Sbjct: 61 -----------AATRVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWEVSCGFFSL 112
Query: 121 CLLLTG 127
C+LLTG
Sbjct: 121 CVLLTG 112
BLAST of Lcy03g019040 vs. ExPASy TrEMBL
Match:
A0A6J1E284 (uncharacterized protein LOC111429900 OS=Cucurbita moschata OX=3662 GN=LOC111429900 PE=4 SV=1)
HSP 1 Score: 158.7 bits (400), Expect = 1.6e-35
Identity = 83/126 (65.87%), Postives = 94/126 (74.60%), Query Frame = 0
Query: 1 MRKGPFIFLLVSLLCLLLLPFCLSETNFTNKAEDHYKQLQQGRPRKDLQGSEQTDAEKGL 60
MRKGPF+ LL+SLLCL LLPFCLSE +FTNKA D YK L+QGRPRKDLQ S+Q +
Sbjct: 1 MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVG--- 60
Query: 61 RKFRFRSGDAVAVVRNMRARGVYGGASDMRRGRSKNDANPIRIKSTSSLLWKVSCGFFSF 120
A + MRARGVYGG +D+ RG SKNDANP+RIKSTSSLLW VSCGFFS
Sbjct: 61 -----------AATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVSCGFFSL 112
Query: 121 CLLLTG 127
C+LLTG
Sbjct: 121 CVLLTG 112
BLAST of Lcy03g019040 vs. ExPASy TrEMBL
Match:
A0A5A7SWW6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00500 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 3.3e-28
Identity = 75/127 (59.06%), Postives = 87/127 (68.50%), Query Frame = 0
Query: 1 MRKGPFIFLLVSLLCLLLLPFCLSETNFTNKAEDHYKQLQQGRPRK---DLQGSEQTDAE 60
M+KG I L S+LCL LLPFCL ETNFT KA+DH KQL+QGRPRK DLQGSE+
Sbjct: 1 MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHDKQLKQGRPRKGSTDLQGSEELHG- 60
Query: 61 KGLRKFRFRSGDAVAVVRNMRARGVYGGASDMRRGRSKNDANPIRIKSTSSLLWKVSCGF 120
AVV MRA+ VYGGA+D+ GRSKNDAN +RIKS SSL+WKVS GF
Sbjct: 61 ------------GAAVVTVMRAKAVYGGANDIHHGRSKNDANSLRIKSISSLVWKVSFGF 114
Query: 121 FSFCLLL 125
FCL++
Sbjct: 121 LGFCLIV 114
BLAST of Lcy03g019040 vs. ExPASy TrEMBL
Match:
A0A0A0LW17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257310 PE=4 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 2.4e-26
Identity = 70/127 (55.12%), Postives = 87/127 (68.50%), Query Frame = 0
Query: 1 MRKGPFIFLLVSLLCLLLLPFCLSETNFTNKAEDHYKQLQQGRPRKDLQGSEQTDAEKGL 60
M+KG + L S++ L LLPFCL ETNFT KA+DH KQL+QGRPRKD+Q SE+
Sbjct: 1 MKKGLLLLFLFSIIFLYLLPFCLCETNFTTKADDHNKQLKQGRPRKDVQSSEE------- 60
Query: 61 RKFRFRSGDAVAVVRNMRARGVYGGASDMRRGRSKNDANPIRIKSTSSLLWKVSCGFFSF 120
G +VA V MRA+ VYGGA+D+ G SKNDAN + IKS SSL+WKVS GF F
Sbjct: 61 ----LHGGASVATV--MRAKAVYGGANDIHHGHSKNDANSLWIKSISSLVWKVSFGFLGF 114
Query: 121 CLLLTGF 128
C+++ GF
Sbjct: 121 CVVVKGF 114
BLAST of Lcy03g019040 vs. ExPASy TrEMBL
Match:
A0A6J1C4Y5 (uncharacterized protein LOC111007432 OS=Momordica charantia OX=3673 GN=LOC111007432 PE=4 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 6.4e-16
Identity = 61/114 (53.51%), Postives = 70/114 (61.40%), Query Frame = 0
Query: 4 GPFIFLLVSLLCLLLLPFCLS-ETNFTNKAEDHYK-QLQQGRPRKDLQGSEQTDAEKGLR 63
G I LL+S+ L LP C S ETNFT K ED YK QL+QGRP KDL+G + E
Sbjct: 5 GLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEE---- 64
Query: 64 KFRFRSGDAVAVVRNMRARGVYGGASDMRRGRSKNDANPIRIKSTSSLLWKVSC 116
+G + MRARGVYGGASDMRRG SKNDA +RIKS S W+V C
Sbjct: 65 -----TGAGATAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSIPSSFWEVLC 107
BLAST of Lcy03g019040 vs. NCBI nr
Match:
XP_022988599.1 (uncharacterized protein LOC111485797 [Cucurbita maxima])
HSP 1 Score: 161.4 bits (407), Expect = 5.2e-36
Identity = 85/126 (67.46%), Postives = 94/126 (74.60%), Query Frame = 0
Query: 1 MRKGPFIFLLVSLLCLLLLPFCLSETNFTNKAEDHYKQLQQGRPRKDLQGSEQTDAEKGL 60
MRKGPF+ LL+SLLCL LLPFCLSE FTNKA D YK L+QGRPRKDLQ SEQ +
Sbjct: 1 MRKGPFLLLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQASEQINVG--- 60
Query: 61 RKFRFRSGDAVAVVRNMRARGVYGGASDMRRGRSKNDANPIRIKSTSSLLWKVSCGFFSF 120
A R MRARGVYGG +D+ RG SKNDANP+RIKSTSSLLW+VSCGFFS
Sbjct: 61 -----------AATRVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWEVSCGFFSL 112
Query: 121 CLLLTG 127
C+LLTG
Sbjct: 121 CVLLTG 112
BLAST of Lcy03g019040 vs. NCBI nr
Match:
KAG7023439.1 (hypothetical protein SDJN02_14464, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 159.8 bits (403), Expect = 1.5e-35
Identity = 84/126 (66.67%), Postives = 94/126 (74.60%), Query Frame = 0
Query: 1 MRKGPFIFLLVSLLCLLLLPFCLSETNFTNKAEDHYKQLQQGRPRKDLQGSEQTDAEKGL 60
MRKGPF+FLL+SLLCL LLPFCLSE FTNKA D YK L+QGRPRKDLQ S+Q +
Sbjct: 1 MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVG--- 60
Query: 61 RKFRFRSGDAVAVVRNMRARGVYGGASDMRRGRSKNDANPIRIKSTSSLLWKVSCGFFSF 120
A + MRARGVYGG +D+ RG SKNDANP+RIKSTSSLLW VSCGFFS
Sbjct: 61 -----------AATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVSCGFFSL 112
Query: 121 CLLLTG 127
C+LLTG
Sbjct: 121 CVLLTG 112
BLAST of Lcy03g019040 vs. NCBI nr
Match:
XP_022921746.1 (uncharacterized protein LOC111429900 [Cucurbita moschata])
HSP 1 Score: 158.7 bits (400), Expect = 3.4e-35
Identity = 83/126 (65.87%), Postives = 94/126 (74.60%), Query Frame = 0
Query: 1 MRKGPFIFLLVSLLCLLLLPFCLSETNFTNKAEDHYKQLQQGRPRKDLQGSEQTDAEKGL 60
MRKGPF+ LL+SLLCL LLPFCLSE +FTNKA D YK L+QGRPRKDLQ S+Q +
Sbjct: 1 MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRKDLQDSKQINVG--- 60
Query: 61 RKFRFRSGDAVAVVRNMRARGVYGGASDMRRGRSKNDANPIRIKSTSSLLWKVSCGFFSF 120
A + MRARGVYGG +D+ RG SKNDANP+RIKSTSSLLW VSCGFFS
Sbjct: 61 -----------AATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVSCGFFSL 112
Query: 121 CLLLTG 127
C+LLTG
Sbjct: 121 CVLLTG 112
BLAST of Lcy03g019040 vs. NCBI nr
Match:
XP_023516536.1 (uncharacterized protein LOC111780387 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 157.1 bits (396), Expect = 9.8e-35
Identity = 85/126 (67.46%), Postives = 94/126 (74.60%), Query Frame = 0
Query: 1 MRKGPFIFLLVSLLCLLLLPFCLSETNFTNKAEDHYKQLQQGRPRKDLQGSEQTDAEKGL 60
MRKGPF+ LL+SLLCL LLPFCLSE FTNKA D YK L+QGRPRKDLQ S+Q
Sbjct: 1 MRKGPFLLLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQ------- 60
Query: 61 RKFRFRSGDAVAVVRNMRARGVYGGASDMRRGRSKNDANPIRIKSTSSLLWKVSCGFFSF 120
+ G A V MRARGVYGG +D+ RG SKNDANP+RIKSTSSLLW VSCGFFS
Sbjct: 61 ----IKVGAATTV---MRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVSCGFFSL 112
Query: 121 CLLLTG 127
C+LLTG
Sbjct: 121 CVLLTG 112
BLAST of Lcy03g019040 vs. NCBI nr
Match:
KAG6589767.1 (hypothetical protein SDJN03_15190, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 149.8 bits (377), Expect = 1.6e-32
Identity = 83/127 (65.35%), Postives = 92/127 (72.44%), Query Frame = 0
Query: 1 MRKGPFIFLLVSLLCLLLLPFCLSETNFTNKAEDHYKQLQQGRPRKDLQGSEQTDAEKGL 60
MRKGPF FLL+SLLCL LLPFCLSE FTNKA D YK L+QGRPRKDLQ S+Q +
Sbjct: 1 MRKGPFPFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVG--- 60
Query: 61 RKFRFRSGDAVAVVRNMRARGVYGGASDMRRGRSKNDANPIRIKSTSSLLWKVSCGFFSF 120
A + MRARGVYGG +D+ RG SKNDANP+RIKST SLLW VSCGFFS
Sbjct: 61 -----------AATKVMRARGVYGGGNDIHRGHSKNDANPLRIKST-SLLWDVSCGFFSL 112
Query: 121 CLLLTGF 128
C+LLT F
Sbjct: 121 CVLLTVF 112
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1JM10 | 2.5e-36 | 67.46 | uncharacterized protein LOC111485797 OS=Cucurbita maxima OX=3661 GN=LOC111485797... | [more] |
A0A6J1E284 | 1.6e-35 | 65.87 | uncharacterized protein LOC111429900 OS=Cucurbita moschata OX=3662 GN=LOC1114299... | [more] |
A0A5A7SWW6 | 3.3e-28 | 59.06 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0LW17 | 2.4e-26 | 55.12 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257310 PE=4 SV=1 | [more] |
A0A6J1C4Y5 | 6.4e-16 | 53.51 | uncharacterized protein LOC111007432 OS=Momordica charantia OX=3673 GN=LOC111007... | [more] |
Match Name | E-value | Identity | Description | |
XP_022988599.1 | 5.2e-36 | 67.46 | uncharacterized protein LOC111485797 [Cucurbita maxima] | [more] |
KAG7023439.1 | 1.5e-35 | 66.67 | hypothetical protein SDJN02_14464, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022921746.1 | 3.4e-35 | 65.87 | uncharacterized protein LOC111429900 [Cucurbita moschata] | [more] |
XP_023516536.1 | 9.8e-35 | 67.46 | uncharacterized protein LOC111780387 [Cucurbita pepo subsp. pepo] | [more] |
KAG6589767.1 | 1.6e-32 | 65.35 | hypothetical protein SDJN03_15190, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |