Lcy03g018900 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCGAGTCTAAGGCTCGTAGAGATTGGCAGGAAGAAGAAGAAGAAGAAAGACGAGACGCTTCGAAGCTTCAGCTATGGCATCTGCTTCGACGGCGGTGTCCTTTGGCCTTAGGTTTTCCCCACTGTGCTCTCGCCAATCAGTTCGCGTCTCTCATAGTTCCGTCCGGCTCGCTTCGTTCAACAAGGCGAACTCCTTGAAGCTCGGTTCCTCCCACAACATTTCCGGGTTTGGAGTCGCTCTCCTTCAGAAGCCATGTCACATTGCTCCCAGTTCTCAAGTTCATACGCCCCTCACTGTTTTCGCTGCCAAAGGCTACAAAATGAAAACCCACAAGGTCTCTCGATCCTCTCTCCTCTGTGTACTTTGAAATTTTTTTGTATGGTTCAATTCTGGTTGGTTTCTGATTAAATTTCAAGTTAATTTCAGACTTCTAGATAGTTTTAATATGTTTAGTTGATTTTTTCAATGGAATTTGTATCAAGATTCGAGAATTGCAGGTTGAATTTAAAATACCCAATTCTAGACGCTTACTGAAGGGGCTAATGTTATTATTATTGTTTAAATGATTCGCGCCTCTCTTCTCTGCATGTTACTGGCCTTTTCTTCTCTTGATTTGGATTTGATTCTTCGGTGTTACTGGATAGGCTTCGGCAAAGCGATTCAGAGTGACGGGTCGGGGAAAAATCGTTCGGAGGAGAGCTGGAAAGCAGCATTTGCTGTACAAGAAGAACACAAAGAGGAAATTACGGCTTTCCAAAATGGTATGTCTTCGTCGTTTATTTTATGTTCATGATTCTGTAATCTGTATCTCTTATGCTGCATTGCTAAACTTGGACCCTTGAATTTTCTGCGAGGGGTTTTATATAAATGGATCAAAATTTAACTAATGCAGCCACTCTTTTCAATCAGTATAATTCCTCGACAAGTTATCTATCAATCTTCTTTTCTTGGATGTAATTATCGATGCAGTAATTTCCTTCATCTATTGATTTAATACCAATCATATTCTAAACTAATAACATGCATTCCAACTCAATCAAGTTTGTTTTGGAAGTATGATCTAATGTGAAGTTATTTATCAGTTGTCATAGTTGGTTCAAACAACAATCCCCAATGCTATCACTGATGGTGATCTTGAAGATTGTTGTAGAGCTCCTTTAGGGAAGAAGTTTTGTTTTGGTTTGATATTCTGAACTGCCCAAGACAGTATCCATGAAAATCAAAGTACAAGAAAATATAGTTGGAGAGAGCTTCAAAATACCTTTGGTTTTAAATATTCAGAATTTAGTACACAAGCTAGTTTCATTTCTTAATTGATTTAATGGTTGCGTCTGACTCAGAAAATGATGATTGATGACTTGGTCAGGAGAACTTGAGTTCGCCCTAGCATTTTCCTTTTCATGCGGGTAGATCTTAATTTTGTACTTTCCGTTTTGTTTTAAAAATATTAGATACTCGAACGCAAGGGGGATTTAAAGGTGATCTCTTTCATTGCAGTTTCATAGCCTTACTGTTTTTAGCAGAATGATTCCGGATTTTTCTTTTTTGGCGCGGGGGTGGGGGCTTTCAAGAGTCGAGAAGCTTTTTTGCTGACACTTGCCCGGGTTGATTTCTTGTAGTAGAAATGAATGGCTTCATACATGTTTTATATCAAAAGGAATTTCTTTTCTTTTATCTAGATTGTTACTGTCTCGCTGAGTCTTCTGACTCTTGTCTTTTTCTCGATGAAATTTTAAAGCTCGCCCTGTTGCCATATAGATCTTTTGCATTTGTATCATGTAGTATATGGTCAATGAACTCTTAGACTAACAAAATGCTTCACCTAGGAACTCTTTTATCAATAATAGTCATGCATAAGATCTTGTGATTATGAACAATGTGTTGTGATACACGGTGATCTGATAATCCTATCGCCTACTTCTTCAATTGACGATACAAAATGAAGGCGATAAATGGGATGAGGAAAAGGATTTTGCCTTCACATCTAGTGTTGAATGACAACACCTGGAAAATTTATAATACCAAAGTTCTAGTGTTTTGCTCTTGGTGTGTTACTGAATGTTTTATCTGATTGGTTTTCTTCTTAACACAGCACCCAGTGAGCCGGAGTGACTACGATAATGTGATTGGTGCTTTGCCGTACCTGAAGGTGAATAGGCAGGCGAAGTAGAGGCCATCACCCCACCCTATTAGATCCTGGCTGTACTTAGTTCATTTGTAACCAAATGATTTTCAATTTTCCAGTACTCATCAAAGGGCAAAGTTTGATTGCTTAAAAATGTTGTTTGTCTAATTTATTCCATCAGTTGATAATGGTATTTTAT GCCGAGTCTAAGGCTCGTAGAGATTGGCAGGAAGAAGAAGAAGAAGAAAGACGAGACGCTTCGAAGCTTCAGCTATGGCATCTGCTTCGACGGCGGTGTCCTTTGGCCTTAGGTTTTCCCCACTGTGCTCTCGCCAATCAGTTCGCGTCTCTCATAGTTCCGTCCGGCTCGCTTCGTTCAACAAGGCGAACTCCTTGAAGCTCGGTTCCTCCCACAACATTTCCGGGTTTGGAGTCGCTCTCCTTCAGAAGCCATGTCACATTGCTCCCAGTTCTCAAGTTCATACGCCCCTCACTGTTTTCGCTGCCAAAGGCTACAAAATGAAAACCCACAAGGCTTCGGCAAAGCGATTCAGAGTGACGGGTCGGGGAAAAATCGTTCGGAGGAGAGCTGGAAAGCAGCATTTGCTGTACAAGAAGAACACAAAGAGGAAATTACGGCTTTCCAAAATGGTATGTCTTCGTCGTTTATTTTATGTTCATGATTCTGTAATCTGTATCTCTTATGCTGCATTGCTAAACTTGGACCCTTGAATTTTCTGCGAGGGGTTTTATATAAATGGATCAAAATTTAACTAATGCAGCCACTCTTTTCAATCAGTATAATTCCTCGACAAGTTATCTATCAATCTTCTTTTCTTGGATGTAATTATCGATGCAGTAATTTCCTTCATCTATTGATTTAATACCAATCATATTCTAAACTAATAACATGCATTCCAACTCAATCAAGTTTGTTTTGGAAGTATGATCTAATGTGAAGTTATTTATCAGTTGTCATAGTTGGTTCAAACAACAATCCCCAATGCTATCACTGATGGTGATCTTGAAGATTGTTGTAGAGCTCCTTTAGGGAAGAAGTTTTGTTTTGGTTTGATATTCTGAACTGCCCAAGACAGTATCCATGAAAATCAAAGTACAAGAAAATATAGTTGGAGAGAGCTTCAAAATACCTTTGGTTTTAAATATTCAGAATTTAGTACACAAGCTAGTTTCATTTCTTAATTGATTTAATGGTTGCGTCTGACTCAGAAAATGATGATTGATGACTTGGTCAGGAGAACTTGAGTTCGCCCTAGCATTTTCCTTTTCATGCGGGTAGATCTTAATTTTGTACTTTCCGTTTTGTTTTAAAAATATTAGATACTCGAACGCAAGGGGGATTTAAAGGTGATCTCTTTCATTGCAGTTTCATAGCCTTACTGTTTTTAGCAGAATGATTCCGGATTTTTCTTTTTTGGCGCGGGGGTGGGGGCTTTCAAGAGTCGAGAAGCTTTTTTGCTGACACTTGCCCGGGTTGATTTCTTGTAGTAGAAATGAATGGCTTCATACATGTTTTATATCAAAAGGAATTTCTTTTCTTTTATCTAGATTGTTACTGTCTCGCTGAGTCTTCTGACTCTTGTCTTTTTCTCGATGAAATTTTAAAGCTCGCCCTGTTGCCATATAGATCTTTTGCATTTGTATCATGTAGTATATGGTCAATGAACTCTTAGACTAACAAAATGCTTCACCTAGGAACTCTTTTATCAATAATAGTCATGCATAAGATCTTGTGATTATGAACAATGTGTTGTGATACACGGTGATCTGATAATCCTATCGCCTACTTCTTCAATTGACGATACAAAATGAAGGCGATAAATGGGATGAGGAAAAGGATTTTGCCTTCACATCTAGTGTTGAATGACAACACCTGGAAAATTTATAATACCAAAGTTCTAGTGTTTTGCTCTTGGTGTGTTACTGAATGTTTTATCTGATTGGTTTTCTTCTTAACACAGCACCCAGTGAGCCGGAGTGACTACGATAATGTGATTGGTGCTTTGCCGTACCTGAAGGTGAATAGGCAGGCGAAGTAGAGGCCATCACCCCACCCTATTAGATCCTGGCTGTACTTAGTTCATTTGTAACCAAATGATTTTCAATTTTCCAGTACTCATCAAAGGGCAAAGTTTGATTGCTTAAAAATGTTGTTTGTCTAATTTATTCCATCAGTTGATAATGGTATTTTAT ATGGCATCTGCTTCGACGGCGGTGTCCTTTGGCCTTAGGTTTTCCCCACTGTGCTCTCGCCAATCAGTTCGCGTCTCTCATAGTTCCGTCCGGCTCGCTTCGTTCAACAAGGCGAACTCCTTGAAGCTCGGTTCCTCCCACAACATTTCCGGGTTTGGAGTCGCTCTCCTTCAGAAGCCATGTCACATTGCTCCCAGTTCTCAAGTTCATACGCCCCTCACTGTTTTCGCTGCCAAAGGCTACAAAATGAAAACCCACAAGGCTTCGGCAAAGCGATTCAGAGTGACGGGTCGGGGAAAAATCGTTCGGAGGAGAGCTGGAAAGCAGCATTTGCTGTACAAGAAGAACACAAAGAGGAAATTACGGCTTTCCAAAATGGTATGTCTTCGTCGTTTATTTTATGTTCATGATTCTGTAATCTGTATCTCTTATGCTGCATTGCTAAACTTGGACCCTTGA MASASTAVSFGLRFSPLCSRQSVRVSHSSVRLASFNKANSLKLGSSHNISGFGVALLQKPCHIAPSSQVHTPLTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMVCLRRLFYVHDSVICISYAALLNLDP Homology
BLAST of Lcy03g018900 vs. ExPASy Swiss-Prot
Match: Q8VZ55 (50S ribosomal protein L35, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL35 PE=1 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22 Identity = 81/142 (57.04%), Postives = 90/142 (63.38%), Query Frame = 0
BLAST of Lcy03g018900 vs. ExPASy Swiss-Prot
Match: P23326 (50S ribosomal protein L35, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL35 PE=1 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.6e-21 Identity = 80/150 (53.33%), Postives = 95/150 (63.33%), Query Frame = 0
BLAST of Lcy03g018900 vs. ExPASy Swiss-Prot
Match: B2J0D1 (50S ribosomal protein L35 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rpmI PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06 Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0
BLAST of Lcy03g018900 vs. ExPASy Swiss-Prot
Match: Q8YRL9 (50S ribosomal protein L35 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rpmI PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06 Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 0
BLAST of Lcy03g018900 vs. ExPASy Swiss-Prot
Match: Q3M7I2 (50S ribosomal protein L35 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rpmI PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06 Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 0
BLAST of Lcy03g018900 vs. ExPASy TrEMBL
Match: A0A6J1C1S3 (50S ribosomal protein L35 OS=Momordica charantia OX=3673 GN=LOC111007484 PE=3 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.5e-51 Identity = 116/128 (90.62%), Postives = 119/128 (92.97%), Query Frame = 0
BLAST of Lcy03g018900 vs. ExPASy TrEMBL
Match: A0A6J1C550 (50S ribosomal protein L35 OS=Momordica charantia OX=3673 GN=LOC111007484 PE=3 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.5e-51 Identity = 121/141 (85.82%), Postives = 125/141 (88.65%), Query Frame = 0
BLAST of Lcy03g018900 vs. ExPASy TrEMBL
Match: A0A1S3B9R8 (50S ribosomal protein L35 OS=Cucumis melo OX=3656 GN=LOC103487333 PE=3 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 3.6e-50 Identity = 113/140 (80.71%), Postives = 122/140 (87.14%), Query Frame = 0
BLAST of Lcy03g018900 vs. ExPASy TrEMBL
Match: A0A6J1JDG6 (50S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111485794 PE=3 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 4.0e-49 Identity = 114/140 (81.43%), Postives = 121/140 (86.43%), Query Frame = 0
BLAST of Lcy03g018900 vs. ExPASy TrEMBL
Match: A0A5D3B7R7 (50S ribosomal protein L35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00400 PE=3 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 5.3e-49 Identity = 112/140 (80.00%), Postives = 121/140 (86.43%), Query Frame = 0
BLAST of Lcy03g018900 vs. NCBI nr
Match: XP_022135559.1 (50S ribosomal protein L35, chloroplastic isoform X2 [Momordica charantia]) HSP 1 Score: 212.2 bits (539), Expect = 3.1e-51 Identity = 116/128 (90.62%), Postives = 119/128 (92.97%), Query Frame = 0
BLAST of Lcy03g018900 vs. NCBI nr
Match: XP_022135558.1 (50S ribosomal protein L35, chloroplastic isoform X1 [Momordica charantia]) HSP 1 Score: 211.5 bits (537), Expect = 5.2e-51 Identity = 121/141 (85.82%), Postives = 125/141 (88.65%), Query Frame = 0
BLAST of Lcy03g018900 vs. NCBI nr
Match: XP_008443834.1 (PREDICTED: 50S ribosomal protein L35, chloroplastic [Cucumis melo]) HSP 1 Score: 207.6 bits (527), Expect = 7.5e-50 Identity = 113/140 (80.71%), Postives = 122/140 (87.14%), Query Frame = 0
BLAST of Lcy03g018900 vs. NCBI nr
Match: XP_023516182.1 (50S ribosomal protein L35, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 204.5 bits (519), Expect = 6.4e-49 Identity = 114/140 (81.43%), Postives = 120/140 (85.71%), Query Frame = 0
BLAST of Lcy03g018900 vs. NCBI nr
Match: XP_022988597.1 (50S ribosomal protein L35, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 204.1 bits (518), Expect = 8.3e-49 Identity = 114/140 (81.43%), Postives = 121/140 (86.43%), Query Frame = 0
BLAST of Lcy03g018900 vs. TAIR 10
Match: AT2G24090.1 (Ribosomal protein L35 ) HSP 1 Score: 107.1 bits (266), Expect = 1.3e-23 Identity = 81/142 (57.04%), Postives = 90/142 (63.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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