Lcy03g018870 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g018870
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionheptahelical transmembrane protein 2
LocationChr03: 52525829 .. 52527365 (+)
RNA-Seq ExpressionLcy03g018870
SyntenyLcy03g018870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGGACGTCAACGGCTCTGATAGCTTTATTCCAGTAAGCTTTCTTTTCTTTTTTAAATTATTGATATTGATATCTGTTTGCCATACTTTTTTTTCCTCCTCTTTTATTGTCGGTTTTGGAGACGTTTGGATTGGATGTTTGATGGACGGTTTGTGACAATCAATTTCCAATTATCCTCTACAATTATTTATTCATTTACTTCGCCGATCTGTACAATTAAATAAGCTATCACAATAATGAAGTACAGAGAGGAAAGGAAAATAATCTTGAAAGGAAAAGGAGAAAAAACATTATTGAATTGGATAGAGTGGAAGAGTGTTGCAATGAAGAATGTCAGTGGCCAAGATTTTGTGATCTTGGACATACTTCCTCCAAATTCCTATTCTAATGCACATGCTAAAGAATTATTTGGTGGAGCCGTGCAAACTCAACATGAGCTGTATAGTGACATTTTTTTTTTGTTTTTTCAGTTGAGATTCACAAGAAAGGAGAAATAATAATTCATTCGTCAACTACCTAAACAAGAAGTCCACACGTCTTGGCATGACAGCGAGTAGAAAGTTTTATAGTATATTTCTATTTTTCTCGTTTTGATTTGCTTGCTTGATTATTGCATCATTTTAAAACTGAAATCAGATTCTCAAGCCAAACAAGAATATTTCATTAATTACCCATTTGAAAAAGTAGGAATCTTTTTCTTCTAAATGTAGAAACTTCAGTGATAAAGACGTATGTGTTCGTGATGTCAATGATTCACTTTGCGTGGAGTATTAGTTCATTGATAACGTACTTCGTTGTGGGGATTCTGAAGAGAGATTTCCAGTAGATGATAAGAAAGTTTGTTGAATTTTTGTTCGTTTACATGCAGGAAACAAGACACGTCTCACAGTCGTCAGTTTTCTTAGTGGATAAAACAACGGCCTTACCAAGATGGCCATGGTTCGTTTTCTTAGCTGGTGCCATGGGTTGCTTGGTTTGTAGCAGCCTCTCCCACCTCCTGGCTTGCCATTCCAAACGCTTCAACCTTTTCTTCTGGCGCCTGGATTACGCAGGCATTTCTTTGATGATAGTCGGATCCTTCTTTGCTCCCATTTATTATGTCTTTCTCTGCAACTATTATCCTCGGTTGTTCTATCTTTCTTCGATATCGGTGCTCGGTGTAGCTGCCATTGTTACTCTTCTTGCACCTGCTCTCTCAGCCCCTCGTTTCCGTGTCTTCAGAGCCTCCTTATTTCTCTCCATGGGCTTCTCAGGAATAATCCCTGCTGCACATGCTGTTGCTCTCTACTGGGGACATCCGGATATTTATCTTGCCTTCTGGTATGAGCTTGCCATGGCTGTTCTATATGCTGCAGGAGCTGGGTTCTATGTTAGTCGGATACCAGAACGATGGAAACCCGGTGCATTCGACATTGCAGGGCACAGCCACCAGATTTTTCACGTATTTGTTGTTCTGGCAGCACTGGCACATAGTGCAGCAACATTGTTTATTATCGATTTTCGACGAAGTTCACCCACCTGCAGCTCTTAA

mRNA sequence

ATGGAAAAGGACGTCAACGGCTCTGATAGCTTTATTCCAGAAACAAGACACGTCTCACAGTCGTCAGTTTTCTTAGTGGATAAAACAACGGCCTTACCAAGATGGCCATGGTTCGTTTTCTTAGCTGGTGCCATGGGTTGCTTGGTTTGTAGCAGCCTCTCCCACCTCCTGGCTTGCCATTCCAAACGCTTCAACCTTTTCTTCTGGCGCCTGGATTACGCAGGCATTTCTTTGATGATAGTCGGATCCTTCTTTGCTCCCATTTATTATGTCTTTCTCTGCAACTATTATCCTCGGTTGTTCTATCTTTCTTCGATATCGGTGCTCGGTGTAGCTGCCATTGTTACTCTTCTTGCACCTGCTCTCTCAGCCCCTCGTTTCCGTGTCTTCAGAGCCTCCTTATTTCTCTCCATGGGCTTCTCAGGAATAATCCCTGCTGCACATGCTGTTGCTCTCTACTGGGGACATCCGGATATTTATCTTGCCTTCTGGTATGAGCTTGCCATGGCTGTTCTATATGCTGCAGGAGCTGGGTTCTATGTTAGTCGGATACCAGAACGATGGAAACCCGGTGCATTCGACATTGCAGGGCACAGCCACCAGATTTTTCACGTATTTGTTGTTCTGGCAGCACTGGCACATAGTGCAGCAACATTGTTTATTATCGATTTTCGACGAAGTTCACCCACCTGCAGCTCTTAA

Coding sequence (CDS)

ATGGAAAAGGACGTCAACGGCTCTGATAGCTTTATTCCAGAAACAAGACACGTCTCACAGTCGTCAGTTTTCTTAGTGGATAAAACAACGGCCTTACCAAGATGGCCATGGTTCGTTTTCTTAGCTGGTGCCATGGGTTGCTTGGTTTGTAGCAGCCTCTCCCACCTCCTGGCTTGCCATTCCAAACGCTTCAACCTTTTCTTCTGGCGCCTGGATTACGCAGGCATTTCTTTGATGATAGTCGGATCCTTCTTTGCTCCCATTTATTATGTCTTTCTCTGCAACTATTATCCTCGGTTGTTCTATCTTTCTTCGATATCGGTGCTCGGTGTAGCTGCCATTGTTACTCTTCTTGCACCTGCTCTCTCAGCCCCTCGTTTCCGTGTCTTCAGAGCCTCCTTATTTCTCTCCATGGGCTTCTCAGGAATAATCCCTGCTGCACATGCTGTTGCTCTCTACTGGGGACATCCGGATATTTATCTTGCCTTCTGGTATGAGCTTGCCATGGCTGTTCTATATGCTGCAGGAGCTGGGTTCTATGTTAGTCGGATACCAGAACGATGGAAACCCGGTGCATTCGACATTGCAGGGCACAGCCACCAGATTTTTCACGTATTTGTTGTTCTGGCAGCACTGGCACATAGTGCAGCAACATTGTTTATTATCGATTTTCGACGAAGTTCACCCACCTGCAGCTCTTAA

Protein sequence

MEKDVNGSDSFIPETRHVSQSSVFLVDKTTALPRWPWFVFLAGAMGCLVCSSLSHLLACHSKRFNLFFWRLDYAGISLMIVGSFFAPIYYVFLCNYYPRLFYLSSISVLGVAAIVTLLAPALSAPRFRVFRASLFLSMGFSGIIPAAHAVALYWGHPDIYLAFWYELAMAVLYAAGAGFYVSRIPERWKPGAFDIAGHSHQIFHVFVVLAALAHSAATLFIIDFRRSSPTCSS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q84N342.1e-8676.24Heptahelical transmembrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=HHP2 PE=... [more]
Q9ZUH82.8e-8368.20Heptahelical transmembrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=HHP3 PE=... [more]
Q6ETK99.8e-6055.67Heptahelical transmembrane protein ADIPOR2 OS=Oryza sativa subsp. japonica OX=39... [more]
Q93ZH99.2e-5856.77Heptahelical transmembrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=HHP1 PE=... [more]
B7F9G72.3e-5656.41Heptahelical transmembrane protein ADIPOR1 OS=Oryza sativa subsp. japonica OX=39... [more]
Match NameE-valueIdentityDescription
A0A6J1C0152.7e-12193.64heptahelical transmembrane protein 2 isoform X3 OS=Momordica charantia OX=3673 G... [more]
A0A6J1BYP12.7e-12193.64heptahelical transmembrane protein 2 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1BZ642.7e-12193.64heptahelical transmembrane protein 2 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1KNQ96.7e-12094.47heptahelical transmembrane protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111495875... [more]
A0A6J1EHT72.5e-11994.04heptahelical transmembrane protein 2 OS=Cucurbita moschata OX=3662 GN=LOC1114326... [more]
Match NameE-valueIdentityDescription
XP_022134594.15.6e-12193.64heptahelical transmembrane protein 2 isoform X1 [Momordica charantia][more]
XP_022134597.15.6e-12193.64heptahelical transmembrane protein 2 isoform X3 [Momordica charantia][more]
XP_022134595.15.6e-12193.64heptahelical transmembrane protein 2 isoform X2 [Momordica charantia][more]
XP_023001819.11.4e-11994.47heptahelical transmembrane protein 2 [Cucurbita maxima][more]
XP_023531152.15.3e-11994.04heptahelical transmembrane protein 2 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT4G30850.11.5e-8776.24heptahelical transmembrane protein2 [more]
AT4G30850.21.5e-8776.24heptahelical transmembrane protein2 [more]
AT2G24150.12.0e-8468.20heptahelical protein 3 [more]
AT5G20270.16.5e-5956.77heptahelical transmembrane protein1 [more]
AT4G37680.11.5e-5048.97heptahelical protein 4 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004254AdipoR/Haemolysin-III-relatedPFAMPF03006HlyIIIcoord: 27..214
e-value: 1.6E-65
score: 221.0
IPR004254AdipoR/Haemolysin-III-relatedPANTHERPTHR20855ADIPOR/PROGESTIN RECEPTOR-RELATEDcoord: 21..232
NoneNo IPR availablePANTHERPTHR20855:SF123BNAA03G51100D PROTEINcoord: 21..232

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g018870.1Lcy03g018870.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009725 response to hormone
biological_process GO:0009744 response to sucrose
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0038023 signaling receptor activity