Lcy03g018760 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCTTAATTTCCACTTCTCACAGTGCTTTCATTTGCTGAATACTTTTTCAAGTAATAATGGGTTGTTTGAAATCCTTGGCTCTTGCTGTTTTGCTTGTTTCGTCTCTTGTTGTGGTGTCCGAGAGTCGAGTGGCCAGGAAAGATTTGGGCCTTGACTTGGGCGGGGTGGGGATAGGGATTGGAGCTGGAATAGGCCTTGGCGGGAGTGGTTCAGGCTCTGGCTCGGGGTCGGGGTCGAGTTCTAGTTCGAGTTCGAGTTCTAGTTCTTCTTCTTCTGGGTCGGGTTCTGATTCTGGATCTGAAGCAGGCTCGTATGCGGGGTCTCGAGCGGGTTCTGGATCAGGTGGTCGTGGAGGTGGAGGGTCGGGCTACGGTGGAGGGTACGGATCGGGTTATGGAGGGGGGCATGGAAAATGAAGATGCCAATTCTTCGTTAACAAGCTCATAATTTAAAAATTAATGGTTACGGATGCTATATGTAATGAATTAATAATATCTAATAAGTACTATTATATTTGCTAGAATGGTTGATATATGAAGGTTTTCTTCCAATGTTTTATATTATTGTATTTGCATTTGCATTTCACAAGTTAAATAGAAGCCATATCTATAATAACTCCATCTATATCTTCT TGCTTAATTTCCACTTCTCACAGTGCTTTCATTTGCTGAATACTTTTTCAAGTAATAATGGGTTGTTTGAAATCCTTGGCTCTTGCTGTTTTGCTTGTTTCGTCTCTTGTTGTGGTGTCCGAGAGTCGAGTGGCCAGGAAAGATTTGGGCCTTGACTTGGGCGGGGTGGGGATAGGGATTGGAGCTGGAATAGGCCTTGGCGGGAGTGGTTCAGGCTCTGGCTCGGGGTCGGGGTCGAGTTCTAGTTCGAGTTCGAGTTCTAGTTCTTCTTCTTCTGGGTCGGGTTCTGATTCTGGATCTGAAGCAGGCTCGTATGCGGGGTCTCGAGCGGGTTCTGGATCAGGTGGTCGTGGAGGTGGAGGGTCGGGCTACGGTGGAGGGTACGGATCGGGTTATGGAGGGGGGCATGGAAAATGAAGATGCCAATTCTTCGTTAACAAGCTCATAATTTAAAAATTAATGGTTACGGATGCTATATGTAATGAATTAATAATATCTAATAAGTACTATTATATTTGCTAGAATGGTTGATATATGAAGGTTTTCTTCCAATGTTTTATATTATTGTATTTGCATTTGCATTTCACAAGTTAAATAGAAGCCATATCTATAATAACTCCATCTATATCTTCT ATGGGTTGTTTGAAATCCTTGGCTCTTGCTGTTTTGCTTGTTTCGTCTCTTGTTGTGGTGTCCGAGAGTCGAGTGGCCAGGAAAGATTTGGGCCTTGACTTGGGCGGGGTGGGGATAGGGATTGGAGCTGGAATAGGCCTTGGCGGGAGTGGTTCAGGCTCTGGCTCGGGGTCGGGGTCGAGTTCTAGTTCGAGTTCGAGTTCTAGTTCTTCTTCTTCTGGGTCGGGTTCTGATTCTGGATCTGAAGCAGGCTCGTATGCGGGGTCTCGAGCGGGTTCTGGATCAGGTGGTCGTGGAGGTGGAGGGTCGGGCTACGGTGGAGGGTACGGATCGGGTTATGGAGGGGGGCATGGAAAATGA MGCLKSLALAVLLVSSLVVVSESRVARKDLGLDLGGVGIGIGAGIGLGGSGSGSGSGSGSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGRGGGGSGYGGGYGSGYGGGHGK Homology
BLAST of Lcy03g018760 vs. ExPASy TrEMBL
Match: A0A6J1E2L6 (glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430017 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 3.6e-29 Identity = 110/125 (88.00%), Postives = 114/125 (91.20%), Query Frame = 0
BLAST of Lcy03g018760 vs. ExPASy TrEMBL
Match: A0A6J1JMR8 (glycine-rich cell wall structural protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485795 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.7e-29 Identity = 110/125 (88.00%), Postives = 114/125 (91.20%), Query Frame = 0
BLAST of Lcy03g018760 vs. ExPASy TrEMBL
Match: A0A0A0LWP0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G277980 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 5.8e-27 Identity = 109/128 (85.16%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of Lcy03g018760 vs. ExPASy TrEMBL
Match: A0A5A7T0K2 (Glycine-rich cell wall structural protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002000 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.3e-26 Identity = 108/127 (85.04%), Postives = 112/127 (88.19%), Query Frame = 0
BLAST of Lcy03g018760 vs. ExPASy TrEMBL
Match: A0A1S4DUX4 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC107990650 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.3e-26 Identity = 108/127 (85.04%), Postives = 112/127 (88.19%), Query Frame = 0
BLAST of Lcy03g018760 vs. NCBI nr
Match: XP_023515822.1 (counting factor 45-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 138.3 bits (347), Expect = 4.4e-29 Identity = 110/123 (89.43%), Postives = 114/123 (92.68%), Query Frame = 0
BLAST of Lcy03g018760 vs. NCBI nr
Match: XP_022921886.1 (glycine-rich cell wall structural protein 2-like [Cucurbita moschata]) HSP 1 Score: 137.5 bits (345), Expect = 7.5e-29 Identity = 110/125 (88.00%), Postives = 114/125 (91.20%), Query Frame = 0
BLAST of Lcy03g018760 vs. NCBI nr
Match: KAG6589747.1 (hypothetical protein SDJN03_15170, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.1 bits (344), Expect = 9.8e-29 Identity = 110/121 (90.91%), Postives = 113/121 (93.39%), Query Frame = 0
BLAST of Lcy03g018760 vs. NCBI nr
Match: XP_022988598.1 (glycine-rich cell wall structural protein 2-like [Cucurbita maxima]) HSP 1 Score: 137.1 bits (344), Expect = 9.8e-29 Identity = 110/125 (88.00%), Postives = 114/125 (91.20%), Query Frame = 0
BLAST of Lcy03g018760 vs. NCBI nr
Match: XP_038879831.1 (glycine-rich cell wall structural protein 2 [Benincasa hispida]) HSP 1 Score: 133.3 bits (334), Expect = 1.4e-27 Identity = 109/127 (85.83%), Postives = 111/127 (87.40%), Query Frame = 0
BLAST of Lcy03g018760 vs. TAIR 10
Match: AT4G30460.1 (glycine-rich protein ) HSP 1 Score: 85.1 bits (209), Expect = 4.1e-17 Identity = 83/122 (68.03%), Postives = 94/122 (77.05%), Query Frame = 0
BLAST of Lcy03g018760 vs. TAIR 10
Match: AT4G30450.1 (glycine-rich protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.3e-15 Identity = 66/97 (68.04%), Postives = 82/97 (84.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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