Lcy03g017710 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGCATTTAATTATTCATTAATTGAGATACAGCTTTTACTTTCCCTTCGCCGACGTGGAAGTTTTTGCCTTTCTTTTTACTCCACCTCGGAGTCAAAAACAGCCGCAGAGCTTCTCTTTGCTTCAAAAATCAAAATTCCACCATCGTCGCCACCGCCGCCGCCGCCTTCTTCACCAAATCCGGCACTCTTCTTCTGCAGATCGAAGGTTCAACACCTTCTTCTTCCTTCAAACCCTAGATCTCCGGTAGTTACAGAGAAAGATGGCGTACGTGGACCATGCGTTTTCGATTACAGACGAGGACATTATGATGGATTCTCCGTTTACGGTCAACAATCGCCCCCCTGTCAAGGAGATCGCTCTTGCCGTTTCTCTTCTCGTTTTTGGCATGCTTGGAATCATCGTTGGTACCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGTACTTTTCTTTTCTGCTTTGTGTTTTTGCTGCAATTTTGCCCTAGTTCGAATGTAAATTTATGCTCTGTTCTTGAAAATATTCAGGGGTGTTTTTCTCGCTGTTGGGAGCTCTCTTGTTTATTCCGGGTTTCTATTACACGCGGATTGCTTACTATGCTTACAAGGGTTACAAGGGTTTCTCCTTCTCCAACATACCTCCTGTCTAAATGCTCCAAGTTCCAACACTTCTCTACACTTGTACAGATTTTCTTCACTGTCTACGTTGTTCCCCCCTCCCGTCTCTCTTTTGACTACTAATAACACTATATCCGTTTACTGTCGGTGAAGGGTGAAGGATTCTATGTGAATTTCCGTTGTGCATTATCGAGATAGTTCTTCTTTTTTAAGTTTTACTTCGCAATGGTCGGTCATACAAGCGTTTCAATGAAGGTCTATATACATACACTTAGTAAATTTCATTGCATAATCGAGTGTTTTATCTATATAATCTGAAGTTTCGTTACTTTCTGCTCCAGTTTGTTTGATGATTTGAACACATTGCGAGTTTATCATGTGAAAAAAATAAAAAAGTAA GTTTGCATTTAATTATTCATTAATTGAGATACAGCTTTTACTTTCCCTTCGCCGACGTGGAAGTTTTTGCCTTTCTTTTTACTCCACCTCGGAGTCAAAAACAGCCGCAGAGCTTCTCTTTGCTTCAAAAATCAAAATTCCACCATCGTCGCCACCGCCGCCGCCGCCTTCTTCACCAAATCCGGCACTCTTCTTCTGCAGATCGAAGGTTCAACACCTTCTTCTTCCTTCAAACCCTAGATCTCCGGTAGTTACAGAGAAAGATGGCGTACGTGGACCATGCGTTTTCGATTACAGACGAGGACATTATGATGGATTCTCCGTTTACGGTCAACAATCGCCCCCCTGTCAAGGAGATCGCTCTTGCCGTTTCTCTTCTCGTTTTTGGCATGCTTGGAATCATCGTTGGTACCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTTTTCTCGCTGTTGGGAGCTCTCTTGTTTATTCCGGGTTTCTATTACACGCGGATTGCTTACTATGCTTACAAGGGTTACAAGGGTTTCTCCTTCTCCAACATACCTCCTGTCTAAATGCTCCAAGTTCCAACACTTCTCTACACTTGTACAGATTTTCTTCACTGTCTACGTTGTTCCCCCCTCCCGTCTCTCTTTTGACTACTAATAACACTATATCCGTTTACTGTCGGTGAAGGGTGAAGGATTCTATGTGAATTTCCGTTGTGCATTATCGAGATAGTTCTTCTTTTTTAAGTTTTACTTCGCAATGGTCGGTCATACAAGCGTTTCAATGAAGGTCTATATACATACACTTAGTAAATTTCATTGCATAATCGAGTGTTTTATCTATATAATCTGAAGTTTCGTTACTTTCTGCTCCAGTTTGTTTGATGATTTGAACACATTGCGAGTTTATCATGTGAAAAAAATAAAAAAGTAA ATGGCGTACGTGGACCATGCGTTTTCGATTACAGACGAGGACATTATGATGGATTCTCCGTTTACGGTCAACAATCGCCCCCCTGTCAAGGAGATCGCTCTTGCCGTTTCTCTTCTCGTTTTTGGCATGCTTGGAATCATCGTTGGTACCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTTTTCTCGCTGTTGGGAGCTCTCTTGTTTATTCCGGGTTTCTATTACACGCGGATTGCTTACTATGCTTACAAGGGTTACAAGGGTTTCTCCTTCTCCAACATACCTCCTGTCTAA MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV Homology
BLAST of Lcy03g017710 vs. ExPASy Swiss-Prot
Match: Q5R8X3 (Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.9e-11 Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 0
BLAST of Lcy03g017710 vs. ExPASy Swiss-Prot
Match: Q96A57 (Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 8.3e-11 Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 0
BLAST of Lcy03g017710 vs. ExPASy Swiss-Prot
Match: Q8CIB6 (Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 8.3e-11 Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 0
BLAST of Lcy03g017710 vs. ExPASy Swiss-Prot
Match: Q5BJP5 (Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 8.3e-11 Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 0
BLAST of Lcy03g017710 vs. ExPASy Swiss-Prot
Match: Q5ZLH4 (Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.4e-10 Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 0
BLAST of Lcy03g017710 vs. ExPASy TrEMBL
Match: A0A1S3BWL2 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103494229 PE=3 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 6.1e-49 Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Lcy03g017710 vs. ExPASy TrEMBL
Match: A0A6J1I4W8 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111470698 PE=3 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48 Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Lcy03g017710 vs. ExPASy TrEMBL
Match: A0A6J1EUE9 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111437657 PE=3 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48 Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Lcy03g017710 vs. ExPASy TrEMBL
Match: A0A0A0LUC1 (Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_1G426960 PE=3 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.8e-48 Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of Lcy03g017710 vs. ExPASy TrEMBL
Match: A0A6J1JDX9 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111484930 PE=3 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.5e-47 Identity = 96/103 (93.20%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of Lcy03g017710 vs. NCBI nr
Match: XP_038879685.1 (transmembrane protein 230 [Benincasa hispida]) HSP 1 Score: 204.1 bits (518), Expect = 5.6e-49 Identity = 99/103 (96.12%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of Lcy03g017710 vs. NCBI nr
Match: XP_008453547.1 (PREDICTED: transmembrane protein 230-like [Cucumis melo]) HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48 Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Lcy03g017710 vs. NCBI nr
Match: XP_022931504.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022972056.1 transmembrane protein 230-like [Cucurbita maxima] >XP_023529399.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >KAG6587719.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 202.2 bits (513), Expect = 2.1e-48 Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Lcy03g017710 vs. NCBI nr
Match: KAG7021684.1 (Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 201.8 bits (512), Expect = 2.8e-48 Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Lcy03g017710 vs. NCBI nr
Match: XP_004146339.1 (transmembrane protein 230 [Cucumis sativus] >KGN65495.1 hypothetical protein Csa_019721 [Cucumis sativus]) HSP 1 Score: 201.4 bits (511), Expect = 3.7e-48 Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of Lcy03g017710 vs. TAIR 10
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872) ) HSP 1 Score: 181.0 bits (458), Expect = 4.8e-46 Identity = 87/103 (84.47%), Postives = 95/103 (92.23%), Query Frame = 0
BLAST of Lcy03g017710 vs. TAIR 10
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872) ) HSP 1 Score: 172.2 bits (435), Expect = 2.2e-43 Identity = 82/103 (79.61%), Postives = 93/103 (90.29%), Query Frame = 0
BLAST of Lcy03g017710 vs. TAIR 10
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872) ) HSP 1 Score: 67.8 bits (164), Expect = 5.9e-12 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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