Lcy03g017460 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATGATTTAACTCAAATTCCTGAGCTGGATGACCTTTTTCGTCCAAAGGGTCCAGTTTTAGAAGCAATGCAGGAAGCAGCAAAGCTTTTTGGAGCATTAGAGACATGGTTCCTCGTTGGAGGAACCACATGTGGAATTCAAGCTGCAATTATGGCAACTTGTTCTCCAGGCGAACATATCATTCTTGCAAGAAATTCCCATTTATCAGTCATATCTGCTTTAGTGTTATCTGGTGCAATACCTAGATACATCGTGCCCGAGTATGATTCCAATTGGGACATTGCTGGTGGGGTTACTCCCTCGTAA ATGCATGATTTAACTCAAATTCCTGAGCTGGATGACCTTTTTCGTCCAAAGGGTCCAGTTTTAGAAGCAATGCAGGAAGCAGCAAAGCTTTTTGGAGCATTAGAGACATGGTTCCTCGTTGGAGGAACCACATGTGGAATTCAAGCTGCAATTATGGCAACTTGTTCTCCAGGCGAACATATCATTCTTGCAAGAAATTCCCATTTATCAGTCATATCTGCTTTAGTGTTATCTGGTGCAATACCTAGATACATCGTGCCCGAGTATGATTCCAATTGGGACATTGCTGGTGGGGTTACTCCCTCGTAA ATGCATGATTTAACTCAAATTCCTGAGCTGGATGACCTTTTTCGTCCAAAGGGTCCAGTTTTAGAAGCAATGCAGGAAGCAGCAAAGCTTTTTGGAGCATTAGAGACATGGTTCCTCGTTGGAGGAACCACATGTGGAATTCAAGCTGCAATTATGGCAACTTGTTCTCCAGGCGAACATATCATTCTTGCAAGAAATTCCCATTTATCAGTCATATCTGCTTTAGTGTTATCTGGTGCAATACCTAGATACATCGTGCCCGAGTATGATTCCAATTGGGACATTGCTGGTGGGGTTACTCCCTCGTAA MHDLTQIPELDDLFRPKGPVLEAMQEAAKLFGALETWFLVGGTTCGIQAAIMATCSPGEHIILARNSHLSVISALVLSGAIPRYIVPEYDSNWDIAGGVTPS Homology
BLAST of Lcy03g017460 vs. ExPASy Swiss-Prot
Match: P21885 (Arginine decarboxylase OS=Bacillus subtilis (strain 168) OX=224308 GN=speA PE=1 SV=2) HSP 1 Score: 93.2 bits (230), Expect = 1.8e-18 Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of Lcy03g017460 vs. ExPASy Swiss-Prot
Match: P37536 (Uncharacterized protein YaaO OS=Bacillus subtilis (strain 168) OX=224308 GN=yaaO PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.4e-17 Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of Lcy03g017460 vs. ExPASy Swiss-Prot
Match: Q81MS2 (Arginine decarboxylase OS=Bacillus anthracis OX=1392 GN=speA PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 4.5e-17 Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 0
BLAST of Lcy03g017460 vs. ExPASy Swiss-Prot
Match: Q819L4 (Arginine decarboxylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) OX=226900 GN=speA PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 4.5e-17 Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 0
BLAST of Lcy03g017460 vs. ExPASy Swiss-Prot
Match: Q9K9K5 (Arginine decarboxylase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=speA PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.7e-16 Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 0
BLAST of Lcy03g017460 vs. ExPASy TrEMBL
Match: A0A6J1JIN8 (uncharacterized protein LOC111484798 OS=Cucurbita maxima OX=3661 GN=LOC111484798 PE=3 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.5e-47 Identity = 94/102 (92.16%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of Lcy03g017460 vs. ExPASy TrEMBL
Match: A0A6J1E488 (uncharacterized protein LOC111429788 OS=Cucurbita moschata OX=3662 GN=LOC111429788 PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 9.6e-47 Identity = 93/102 (91.18%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of Lcy03g017460 vs. ExPASy TrEMBL
Match: A0A6J1JG27 (uncharacterized protein LOC111484796 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484796 PE=3 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44 Identity = 86/102 (84.31%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of Lcy03g017460 vs. ExPASy TrEMBL
Match: A0A6J1J9M1 (uncharacterized protein LOC111484796 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111484796 PE=3 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44 Identity = 86/102 (84.31%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of Lcy03g017460 vs. ExPASy TrEMBL
Match: A0A6J1JDD3 (uncharacterized protein LOC111484796 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484796 PE=3 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44 Identity = 86/102 (84.31%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of Lcy03g017460 vs. NCBI nr
Match: XP_022987168.1 (uncharacterized protein LOC111484798 [Cucurbita maxima]) HSP 1 Score: 198.4 bits (503), Expect = 3.1e-47 Identity = 94/102 (92.16%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of Lcy03g017460 vs. NCBI nr
Match: XP_022921563.1 (uncharacterized protein LOC111429788 [Cucurbita moschata]) HSP 1 Score: 195.7 bits (496), Expect = 2.0e-46 Identity = 93/102 (91.18%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of Lcy03g017460 vs. NCBI nr
Match: KAG7023340.1 (speA [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 194.1 bits (492), Expect = 5.8e-46 Identity = 92/102 (90.20%), Postives = 96/102 (94.12%), Query Frame = 0
BLAST of Lcy03g017460 vs. NCBI nr
Match: KAG6589653.1 (hypothetical protein SDJN03_15076, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 194.1 bits (492), Expect = 5.8e-46 Identity = 92/102 (90.20%), Postives = 96/102 (94.12%), Query Frame = 0
BLAST of Lcy03g017460 vs. NCBI nr
Match: XP_023515534.1 (uncharacterized protein LOC111779661 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 194.1 bits (492), Expect = 5.8e-46 Identity = 92/102 (90.20%), Postives = 96/102 (94.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|