Lcy03g017450 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g017450
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein kinase domain-containing protein
LocationChr03: 51242144 .. 51245259 (-)
RNA-Seq ExpressionLcy03g017450
SyntenyLcy03g017450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGCCCATCTCCGCCTTTGTCGCCGGCCACCGCCATCAGCGTCATTCTGGTTTTGATCTCGATGGAGGTCGTCTTTGTGGCTTGGAGTGCTTCCACAGACGGCGAAGCGCTTCTCAAGTTCAAAGGGTCTCTGGAAATCAGCAACGATGCGTTGGGCAGTTGGGCTGCCGGGTCTTCCCCTTGCTCCGGCGACCAGGCGAATTGGGTCGGAGTTCTTTGCGAGAAGGGAAATGTTTGGGGATTGAAACTTGAGAACATGGGGCTCAAGGGCAACATTGACATTGAGTCTCTGGAGGGGGTGCCCCAATTAAGGGCCCTTAGCCTTATGAACAACGAATTTGAGGGCTCTTTGCCGGACGTCAAGAGACTTGGGGCTCTGAAAGCTCTGTATTTGTCACGAAACCGCTTCTCAGGGAACATTCCCGGGGACAAATTCTTGAGCATGTTGTCCTTGAAGAAGGTGCATTTGGCAAACAACCAGTTCGAGGGTCAGATTCCTTGGTCCTTGGTTGAGCTGCCTCGCCTCTTGGAGTTGAGGCTTGAAGGGAACAAGTTTTCTGGCCAAATTCCTAATTTTCAGCAGAACACTTTGAAGGCCTTTAATGTCTCTAATAACGATCAACTTCATGGCCAAATCCCACGTTCCCTCACCCAAATGGATCCATCCTCCTTTTCAGGTCAGAACAATCCGCTTATTTATTCTTCCACCCTCCGTTTAAATGTTGACAACTTTGAGAGGAAAAAGTTTTTCTCTTAGTCGTCATCATTTTAATAGTGTTGCATAGAATGGTACCTACACCACCTTGTGTAAAGTCAAGTATCGTTGTTTATTCTCTTTTCGATTTTTTGGAATGTTGATAAAAAAAAATAAATAAATAATGGTTGTTTTTTAATCTTCATATTTCTTGGCCATGCAATCTCTTTCACTTTTGGGAAATCGTTTGAATGGTTTTTAGATTCCATATGATATGATATGATAAAACTACCCATCATCTTCCAAATAGTTATTGAATCTTTGCTTCCCTTTTAAGGGCTAGTTCAAAAAAAGTTTGAAGCTTTGGACGAAATTTATATTAATTTTCTTTTCAAGATTCTGACATAGGGTGCTTCCTTTTGACGAAAATTTAGGGTAGGGTGCTTCCTTCCAACTCTTTATTATTTTTATATTTGTTTAAACTTTATGTACTTCTTAAAGTTCACTTTGGTCTTTAATAAAACGTCCATTTTGGTTCCTAACTTTGAAAAAATGACCATTTTGATCTCTTAGACCAAAATAAACTTTTTAAAAGTACAAAAGAACAAAAATAGATGTTTTGGAAGTTGAAAGACCAAACTAAACCAAAACGGAGGCATAGGAAACCAAAATAGTGTTTAAATGTTTTACCTATTTTTTAAATTCTATTAAGAAACTTTGGAAATTCCTATATGCAGGCATTGAAGGTTTATGTGGACCGCCACTTGACAAACCATGCAACAGTACAAAGATGCCCTCAATTGCGAGCATCATAATGGTTTCAATAGCTGTGACAGCGGCTCTACTTGCCATCGGTGCAGGAATAGTCATCCTTAGCCGTCGTAACCAATCATCTCCTTGCCAAGAGAGTCCAGCTCACAAATCTCCAAGTGCCAGTCAAGTTCCAGCAGTCGGGTCGAGGTCACCGGACTGCGGCTCGAGCCATGGGAGCTCGGGTAAACGGGCGCCCGAGAGTGCTAAATTGTCATTTGTAAGAGATGATTTAGAGAAGTTTGATTTATCAGACTTGCTTAAAGCCTCTGCAGAAATCCTAGGAAGTGGGTGCTTTGGTTCTTCTTACAAAGCAGCCTTGTCCAACGGACCTGTGATGGTTGTAAAGAGGTTTAAGCAAATGAACAATGTGGATAGAGAGGAATTCCAAGAACATATGAGGAGAATTGGAAGGTTGAAACACGCCAACTTGCTTCCTCTCGTGGCCTACTACTACAAAAGGGAAGAGAAGCTTCTCATTACGGACTTTGTTGAGAAGGGTAGCTTGGCCGTTCAACTTCATGGTACATTTACCTTTTTCTTTTCCTTCCATTCAACACTTTTCTCATTGACATCTGCCAAGAATACGTATAAAAAGATTAAATATATCATAACTTATCGACTTACACTTTGAGTTTCTATATCATAACAAAAGGTCTTTTAGTCAAATTCCTATAAAGCACAAGTGAAAGGGAATAGTTTTTTTTTTTTTTTTTTTTTGAGGAAGAAAGGGAATAGTTAAGAATGTGCACAAAAGATTAAACATACTATAACTGATCAAATTGAACTTTTAAACTTAGCAGTAATTTCACAAGATATTAGAGTAGAAGGTTATATTCCAAACTTGAATGAAAGCGCTAAATATACCATAATCTATCTGAATATTCACTATTGCTTCAAATTTTGGCTGAATTGGATTCTCTTGTCTATTCCTTTTAGGGCACAAAGCCGTGGGTCAACCAGCCCTGGATTGGCCAGCAAGGTTGAAGATCATCAAGGGCATTGCAAAGGGTCTTCGCTATCTCTACGCTGAACTTCCAAGTCTCATAACCCCACACGGCCATCTCAAGTCCTCAAATGTCCTTCTCAAGGCCAATTACGAGCCCATTCTTTCGGACTATGGCCTAATCCCGGTTGTGAACCAAGAACACGCCCAAGAGCTAATGGTGGCCTACAAATCCCCCGAGTACTCTCAACAAGGTCGCATCACAAAGAAGACAGATGTGTGGAGTTTTGGGCTGTTGATCTTAGAGATTCTAACAGGGAAATTCCCAGCCAACTTTTTGCATCAGAACAAGAGTAGTGACGATGAGGATTTGGCGTGTTGGGTCAGATCTATTCCTGAAAAGGAATGGAACAGCCAAGTATTGGATAAGGACATGGGGCCAACCAAGAGCAGCGACGGAGAGATTATGAAGCTTCTGAGAATTGCAATGGCATGTTGCGAGAGCGACTTTGAGAAGAGGCTGGATTTGCGAGAGGCTGTGGAGAAGATTGAGGAGTTGAAAGAAAAAGATGGGGATGAAGATTTCTATTCTTCATACGCCAGTGAAGCTGACATTAGATCTTCAAGAGGGTTATCTGATGAACTCAATTTCACCATGTGA

mRNA sequence

ATGGCAAGCCCATCTCCGCCTTTGTCGCCGGCCACCGCCATCAGCGTCATTCTGGTTTTGATCTCGATGGAGGTCGTCTTTGTGGCTTGGAGTGCTTCCACAGACGGCGAAGCGCTTCTCAAGTTCAAAGGGTCTCTGGAAATCAGCAACGATGCGTTGGGCAGTTGGGCTGCCGGGTCTTCCCCTTGCTCCGGCGACCAGGCGAATTGGGTCGGAGTTCTTTGCGAGAAGGGAAATGTTTGGGGATTGAAACTTGAGAACATGGGGCTCAAGGGCAACATTGACATTGAGTCTCTGGAGGGGGTGCCCCAATTAAGGGCCCTTAGCCTTATGAACAACGAATTTGAGGGCTCTTTGCCGGACGTCAAGAGACTTGGGGCTCTGAAAGCTCTGTATTTGTCACGAAACCGCTTCTCAGGGAACATTCCCGGGGACAAATTCTTGAGCATGTTGTCCTTGAAGAAGGTGCATTTGGCAAACAACCAGTTCGAGGGTCAGATTCCTTGGTCCTTGGTTGAGCTGCCTCGCCTCTTGGAGTTGAGGCTTGAAGGGAACAAGTTTTCTGGCCAAATTCCTAATTTTCAGCAGAACACTTTGAAGGCCTTTAATGTCTCTAATAACGATCAACTTCATGGCCAAATCCCACGTTCCCTCACCCAAATGGATCCATCCTCCTTTTCAGGCATTGAAGGTTTATGTGGACCGCCACTTGACAAACCATGCAACAGTACAAAGATGCCCTCAATTGCGAGCATCATAATGGTTTCAATAGCTGTGACAGCGGCTCTACTTGCCATCGGTGCAGGAATAGTCATCCTTAGCCGTCGTAACCAATCATCTCCTTGCCAAGAGAGTCCAGCTCACAAATCTCCAAGTGCCAGTCAAGTTCCAGCAGTCGGGTCGAGGTCACCGGACTGCGGCTCGAGCCATGGGAGCTCGGGTAAACGGGCGCCCGAGAGTGCTAAATTGTCATTTGTAAGAGATGATTTAGAGAAGTTTGATTTATCAGACTTGCTTAAAGCCTCTGCAGAAATCCTAGGAAGTGGGTGCTTTGGTTCTTCTTACAAAGCAGCCTTGTCCAACGGACCTGTGATGGTTGTAAAGAGGTTTAAGCAAATGAACAATGTGGATAGAGAGGAATTCCAAGAACATATGAGGAGAATTGGAAGGTTGAAACACGCCAACTTGCTTCCTCTCGTGGCCTACTACTACAAAAGGGAAGAGAAGCTTCTCATTACGGACTTTGTTGAGAAGGGTAGCTTGGCCGTTCAACTTCATGGGCACAAAGCCGTGGGTCAACCAGCCCTGGATTGGCCAGCAAGGTTGAAGATCATCAAGGGCATTGCAAAGGGTCTTCGCTATCTCTACGCTGAACTTCCAAGTCTCATAACCCCACACGGCCATCTCAAGTCCTCAAATGTCCTTCTCAAGGCCAATTACGAGCCCATTCTTTCGGACTATGGCCTAATCCCGGTTGTGAACCAAGAACACGCCCAAGAGCTAATGGTGGCCTACAAATCCCCCGAGTACTCTCAACAAGGTCGCATCACAAAGAAGACAGATGTGTGGAGTTTTGGGCTGTTGATCTTAGAGATTCTAACAGGGAAATTCCCAGCCAACTTTTTGCATCAGAACAAGAGTAGTGACGATGAGGATTTGGCGTGTTGGGTCAGATCTATTCCTGAAAAGGAATGGAACAGCCAAGTATTGGATAAGGACATGGGGCCAACCAAGAGCAGCGACGGAGAGATTATGAAGCTTCTGAGAATTGCAATGGCATGTTGCGAGAGCGACTTTGAGAAGAGGCTGGATTTGCGAGAGGCTGTGGAGAAGATTGAGGAGTTGAAAGAAAAAGATGGGGATGAAGATTTCTATTCTTCATACGCCAGTGAAGCTGACATTAGATCTTCAAGAGGGTTATCTGATGAACTCAATTTCACCATGTGA

Coding sequence (CDS)

ATGGCAAGCCCATCTCCGCCTTTGTCGCCGGCCACCGCCATCAGCGTCATTCTGGTTTTGATCTCGATGGAGGTCGTCTTTGTGGCTTGGAGTGCTTCCACAGACGGCGAAGCGCTTCTCAAGTTCAAAGGGTCTCTGGAAATCAGCAACGATGCGTTGGGCAGTTGGGCTGCCGGGTCTTCCCCTTGCTCCGGCGACCAGGCGAATTGGGTCGGAGTTCTTTGCGAGAAGGGAAATGTTTGGGGATTGAAACTTGAGAACATGGGGCTCAAGGGCAACATTGACATTGAGTCTCTGGAGGGGGTGCCCCAATTAAGGGCCCTTAGCCTTATGAACAACGAATTTGAGGGCTCTTTGCCGGACGTCAAGAGACTTGGGGCTCTGAAAGCTCTGTATTTGTCACGAAACCGCTTCTCAGGGAACATTCCCGGGGACAAATTCTTGAGCATGTTGTCCTTGAAGAAGGTGCATTTGGCAAACAACCAGTTCGAGGGTCAGATTCCTTGGTCCTTGGTTGAGCTGCCTCGCCTCTTGGAGTTGAGGCTTGAAGGGAACAAGTTTTCTGGCCAAATTCCTAATTTTCAGCAGAACACTTTGAAGGCCTTTAATGTCTCTAATAACGATCAACTTCATGGCCAAATCCCACGTTCCCTCACCCAAATGGATCCATCCTCCTTTTCAGGCATTGAAGGTTTATGTGGACCGCCACTTGACAAACCATGCAACAGTACAAAGATGCCCTCAATTGCGAGCATCATAATGGTTTCAATAGCTGTGACAGCGGCTCTACTTGCCATCGGTGCAGGAATAGTCATCCTTAGCCGTCGTAACCAATCATCTCCTTGCCAAGAGAGTCCAGCTCACAAATCTCCAAGTGCCAGTCAAGTTCCAGCAGTCGGGTCGAGGTCACCGGACTGCGGCTCGAGCCATGGGAGCTCGGGTAAACGGGCGCCCGAGAGTGCTAAATTGTCATTTGTAAGAGATGATTTAGAGAAGTTTGATTTATCAGACTTGCTTAAAGCCTCTGCAGAAATCCTAGGAAGTGGGTGCTTTGGTTCTTCTTACAAAGCAGCCTTGTCCAACGGACCTGTGATGGTTGTAAAGAGGTTTAAGCAAATGAACAATGTGGATAGAGAGGAATTCCAAGAACATATGAGGAGAATTGGAAGGTTGAAACACGCCAACTTGCTTCCTCTCGTGGCCTACTACTACAAAAGGGAAGAGAAGCTTCTCATTACGGACTTTGTTGAGAAGGGTAGCTTGGCCGTTCAACTTCATGGGCACAAAGCCGTGGGTCAACCAGCCCTGGATTGGCCAGCAAGGTTGAAGATCATCAAGGGCATTGCAAAGGGTCTTCGCTATCTCTACGCTGAACTTCCAAGTCTCATAACCCCACACGGCCATCTCAAGTCCTCAAATGTCCTTCTCAAGGCCAATTACGAGCCCATTCTTTCGGACTATGGCCTAATCCCGGTTGTGAACCAAGAACACGCCCAAGAGCTAATGGTGGCCTACAAATCCCCCGAGTACTCTCAACAAGGTCGCATCACAAAGAAGACAGATGTGTGGAGTTTTGGGCTGTTGATCTTAGAGATTCTAACAGGGAAATTCCCAGCCAACTTTTTGCATCAGAACAAGAGTAGTGACGATGAGGATTTGGCGTGTTGGGTCAGATCTATTCCTGAAAAGGAATGGAACAGCCAAGTATTGGATAAGGACATGGGGCCAACCAAGAGCAGCGACGGAGAGATTATGAAGCTTCTGAGAATTGCAATGGCATGTTGCGAGAGCGACTTTGAGAAGAGGCTGGATTTGCGAGAGGCTGTGGAGAAGATTGAGGAGTTGAAAGAAAAAGATGGGGATGAAGATTTCTATTCTTCATACGCCAGTGAAGCTGACATTAGATCTTCAAGAGGGTTATCTGATGAACTCAATTTCACCATGTGA

Protein sequence

MASPSPPLSPATAISVILVLISMEVVFVAWSASTDGEALLKFKGSLEISNDALGSWAAGSSPCSGDQANWVGVLCEKGNVWGLKLENMGLKGNIDIESLEGVPQLRALSLMNNEFEGSLPDVKRLGALKALYLSRNRFSGNIPGDKFLSMLSLKKVHLANNQFEGQIPWSLVELPRLLELRLEGNKFSGQIPNFQQNTLKAFNVSNNDQLHGQIPRSLTQMDPSSFSGIEGLCGPPLDKPCNSTKMPSIASIIMVSIAVTAALLAIGAGIVILSRRNQSSPCQESPAHKSPSASQVPAVGSRSPDCGSSHGSSGKRAPESAKLSFVRDDLEKFDLSDLLKASAEILGSGCFGSSYKAALSNGPVMVVKRFKQMNNVDREEFQEHMRRIGRLKHANLLPLVAYYYKREEKLLITDFVEKGSLAVQLHGHKAVGQPALDWPARLKIIKGIAKGLRYLYAELPSLITPHGHLKSSNVLLKANYEPILSDYGLIPVVNQEHAQELMVAYKSPEYSQQGRITKKTDVWSFGLLILEILTGKFPANFLHQNKSSDDEDLACWVRSIPEKEWNSQVLDKDMGPTKSSDGEIMKLLRIAMACCESDFEKRLDLREAVEKIEELKEKDGDEDFYSSYASEADIRSSRGLSDELNFTM
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q84JQ46.1e-18454.31Pollen receptor-like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=PRK2 PE=1 SV=1[more]
C0LGU01.1e-18252.99Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1[more]
Q9LJY05.7e-16649.92Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1[more]
C0LGR99.4e-16146.23Probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Arabidop... [more]
Q9LPT19.1e-15647.99Pollen receptor-like kinase 5 OS=Arabidopsis thaliana OX=3702 GN=PRK5 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1L1V33.4e-30782.98pollen receptor-like kinase 1 OS=Cucurbita maxima OX=3661 GN=LOC111499091 PE=4 S... [more]
A0A0A0LSZ18.5e-30682.62Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G025... [more]
A0A5A7UQL71.1e-30584.87Pollen receptor-like kinase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A1S3BXM11.1e-30584.87pollen receptor-like kinase 1 OS=Cucumis melo OX=3656 GN=LOC103494206 PE=4 SV=1[more]
A0A5D3DYF61.4e-30584.87Pollen receptor-like kinase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
Match NameE-valueIdentityDescription
XP_038878762.10.0e+0085.10pollen receptor-like kinase 1 [Benincasa hispida][more]
XP_023006324.17.1e-30782.98pollen receptor-like kinase 1 [Cucurbita maxima][more]
XP_004137558.11.7e-30582.62pollen receptor-like kinase 1 [Cucumis sativus] >KGN63902.1 hypothetical protein... [more]
XP_008453523.12.3e-30584.87PREDICTED: pollen receptor-like kinase 1 [Cucumis melo] >KAA0058162.1 pollen rec... [more]
TYK28524.13.0e-30584.87pollen receptor-like kinase 1 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT2G07040.14.3e-18554.31Leucine-rich repeat protein kinase family protein [more]
AT5G35390.18.1e-18452.99Leucine-rich repeat protein kinase family protein [more]
AT3G20190.14.0e-16749.92Leucine-rich repeat protein kinase family protein [more]
AT4G31250.16.7e-16246.23Leucine-rich repeat protein kinase family protein [more]
AT1G50610.16.5e-15747.99Leucine-rich repeat protein kinase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 34..149
e-value: 1.8E-22
score: 81.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 150..243
e-value: 6.3E-17
score: 63.6
IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainPFAMPF07714PK_Tyr_Ser-Thrcoord: 344..611
e-value: 2.6E-30
score: 105.6
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 128..187
e-value: 9.9E-7
score: 28.4
NoneNo IPR availableGENE3D3.30.200.20Phosphorylase Kinase; domain 1coord: 307..415
e-value: 8.7E-18
score: 66.1
NoneNo IPR availableGENE3D1.10.510.10Transferase(Phosphotransferase) domain 1coord: 416..634
e-value: 4.7E-38
score: 132.5
NoneNo IPR availablePIRSRPIRSR000550-2PIRSR000550-2coord: 345..540
e-value: 3.8E-5
score: 20.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..320
NoneNo IPR availablePANTHERPTHR48007:SF41POLLEN RECEPTOR-LIKE KINASE 5coord: 12..626
NoneNo IPR availablePANTHERPTHR48007LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1coord: 12..626
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 33..221
IPR013210Leucine-rich repeat-containing N-terminal, plant-typePFAMPF08263LRRNT_2coord: 33..75
e-value: 1.0E-9
score: 38.6
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 340..625
score: 25.87018
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 344..614

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g017450.1Lcy03g017450.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004672 protein kinase activity