Lcy03g017310 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTATTTTTCTCCTCTCTCTCTCTTTCTGTCGTATTCATGCATAAATTCAAGCACAGCGAGAGAGATTTCATTATCGGCGCAGCTCCAACTTTCCCCACTTTTGCCAAACACGCGCTCTCCATGGGGAACTCAGCGTCCTGTGCCCCTTCAATGGCCTCCAATGCCGCGGCGAAGGTCTTATCCTTAGAAGGAAACTTGCAGAGTTTCACGAAGCCAGTGAAGGCCGCGGAATTGATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGAGATCTCAAGGTCGGCCATCGGATTCAAGGCCTTCTGCCGGAGGAAGATCTCGAGTGCCGCCGATTGTACTTTCTACTTCCGATGGATCTTCTTTACTCTGTTTTGACGATCGAAGAAATGAGCTCTCTCACTTACATCGCGACAGAGGCTCTGAAACATGGAAATTCGAGTGGATTCGGAAAGATCTTCCCTGTTTTGATCAGTGAACTCTGTATTTTTCCGTCGGATGTGAATCGAGTGAAATCGACGGACGGCGATCGAGAGAATCGAAGTTCGAAGCCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCTGAAACTTCGTGCACATAGAAACAGAGACGATCGCAATCGGAAATATGTGTGAGATTAATACATTACGAATAATTGGTAGCATTTTTGCTTCGTGAATCGGTAGATATAATAATAATTTTATTTTATTTTATTTTATTTTATTTT CTTTATTTTTCTCCTCTCTCTCTCTTTCTGTCGTATTCATGCATAAATTCAAGCACAGCGAGAGAGATTTCATTATCGGCGCAGCTCCAACTTTCCCCACTTTTGCCAAACACGCGCTCTCCATGGGGAACTCAGCGTCCTGTGCCCCTTCAATGGCCTCCAATGCCGCGGCGAAGGTCTTATCCTTAGAAGGAAACTTGCAGAGTTTCACGAAGCCAGTGAAGGCCGCGGAATTGATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGAGATCTCAAGGTCGGCCATCGGATTCAAGGCCTTCTGCCGGAGGAAGATCTCGAGTGCCGCCGATTGTACTTTCTACTTCCGATGGATCTTCTTTACTCTGTTTTGACGATCGAAGAAATGAGCTCTCTCACTTACATCGCGACAGAGGCTCTGAAACATGGAAATTCGAGTGGATTCGGAAAGATCTTCCCTGTTTTGATCAGTGAACTCTGTATTTTTCCGTCGGATGTGAATCGAGTGAAATCGACGGACGGCGATCGAGAGAATCGAAGTTCGAAGCCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCTGAAACTTCGTGCACATAGAAACAGAGACGATCGCAATCGGAAATATGTGTGAGATTAATACATTACGAATAATTGGTAGCATTTTTGCTTCGTGAATCGGTAGATATAATAATAATTTTATTTTATTTTATTTTATTTTATTTT ATGCATAAATTCAAGCACAGCGAGAGAGATTTCATTATCGGCGCAGCTCCAACTTTCCCCACTTTTGCCAAACACGCGCTCTCCATGGGGAACTCAGCGTCCTGTGCCCCTTCAATGGCCTCCAATGCCGCGGCGAAGGTCTTATCCTTAGAAGGAAACTTGCAGAGTTTCACGAAGCCAGTGAAGGCCGCGGAATTGATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGAGATCTCAAGGTCGGCCATCGGATTCAAGGCCTTCTGCCGGAGGAAGATCTCGAGTGCCGCCGATTGTACTTTCTACTTCCGATGGATCTTCTTTACTCTGTTTTGACGATCGAAGAAATGAGCTCTCTCACTTACATCGCGACAGAGGCTCTGAAACATGGAAATTCGAGTGGATTCGGAAAGATCTTCCCTGTTTTGATCAGTGAACTCTGTATTTTTCCGTCGGATGTGAATCGAGTGAAATCGACGGACGGCGATCGAGAGAATCGAAGTTCGAAGCCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCTGAAACTTCGTGCACATAG MHKFKHSERDFIIGAAPTFPTFAKHALSMGNSASCAPSMASNAAAKVLSLEGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIQGLLPEEDLECRRLYFLLPMDLLYSVLTIEEMSSLTYIATEALKHGNSSGFGKIFPVLISELCIFPSDVNRVKSTDGDRENRSSKPVQRLMSKQRSWKPALETIAETSCT Homology
BLAST of Lcy03g017310 vs. ExPASy TrEMBL
Match: A0A6J1C0W6 (uncharacterized protein LOC111007254 OS=Momordica charantia OX=3673 GN=LOC111007254 PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.8e-78 Identity = 154/181 (85.08%), Postives = 166/181 (91.71%), Query Frame = 0
BLAST of Lcy03g017310 vs. ExPASy TrEMBL
Match: A0A6J1E2A0 (uncharacterized protein LOC111429917 OS=Cucurbita moschata OX=3662 GN=LOC111429917 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 7.7e-77 Identity = 149/168 (88.69%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of Lcy03g017310 vs. ExPASy TrEMBL
Match: A0A6J1HLR9 (uncharacterized protein LOC111465363 OS=Cucurbita maxima OX=3661 GN=LOC111465363 PE=4 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76 Identity = 153/170 (90.00%), Postives = 159/170 (93.53%), Query Frame = 0
BLAST of Lcy03g017310 vs. ExPASy TrEMBL
Match: A0A6J1JH13 (uncharacterized protein LOC111485040 OS=Cucurbita maxima OX=3661 GN=LOC111485040 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 2.9e-76 Identity = 148/168 (88.10%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of Lcy03g017310 vs. ExPASy TrEMBL
Match: A0A6J1F5K3 (uncharacterized protein LOC111441040 OS=Cucurbita moschata OX=3662 GN=LOC111441040 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 6.1e-74 Identity = 150/170 (88.24%), Postives = 157/170 (92.35%), Query Frame = 0
BLAST of Lcy03g017310 vs. NCBI nr
Match: XP_022135244.1 (uncharacterized protein LOC111007254 [Momordica charantia]) HSP 1 Score: 302.0 bits (772), Expect = 3.8e-78 Identity = 154/181 (85.08%), Postives = 166/181 (91.71%), Query Frame = 0
BLAST of Lcy03g017310 vs. NCBI nr
Match: XP_022921761.1 (uncharacterized protein LOC111429917 [Cucurbita moschata]) HSP 1 Score: 296.6 bits (758), Expect = 1.6e-76 Identity = 149/168 (88.69%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of Lcy03g017310 vs. NCBI nr
Match: XP_022965466.1 (uncharacterized protein LOC111465363 [Cucurbita maxima]) HSP 1 Score: 295.0 bits (754), Expect = 4.7e-76 Identity = 153/170 (90.00%), Postives = 159/170 (93.53%), Query Frame = 0
BLAST of Lcy03g017310 vs. NCBI nr
Match: XP_022987495.1 (uncharacterized protein LOC111485040 [Cucurbita maxima]) HSP 1 Score: 294.7 bits (753), Expect = 6.1e-76 Identity = 148/168 (88.10%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of Lcy03g017310 vs. NCBI nr
Match: KAG7023330.1 (hypothetical protein SDJN02_14355, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 294.3 bits (752), Expect = 7.9e-76 Identity = 147/168 (87.50%), Postives = 157/168 (93.45%), Query Frame = 0
BLAST of Lcy03g017310 vs. TAIR 10
Match: AT1G18290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 109.0 bits (271), Expect = 4.4e-24 Identity = 70/181 (38.67%), Postives = 102/181 (56.35%), Query Frame = 0
BLAST of Lcy03g017310 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09 Identity = 38/134 (28.36%), Postives = 67/134 (50.00%), Query Frame = 0
BLAST of Lcy03g017310 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09 Identity = 30/95 (31.58%), Postives = 54/95 (56.84%), Query Frame = 0
BLAST of Lcy03g017310 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 2.6e-08 Identity = 30/93 (32.26%), Postives = 50/93 (53.76%), Query Frame = 0
BLAST of Lcy03g017310 vs. TAIR 10
Match: AT5G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 2.6e-08 Identity = 55/189 (29.10%), Postives = 82/189 (43.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|