Homology
BLAST of Lcy03g017270 vs. ExPASy Swiss-Prot
Match:
Q8S9K3 (Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VAR3 PE=1 SV=2)
HSP 1 Score: 137.5 bits (345), Expect = 3.6e-31
Identity = 84/281 (29.89%), Postives = 143/281 (50.89%), Query Frame = 0
Query: 69 PEWVSFVDGLKTKGYLIEPPSEDANGDGTGGDAATPSETDYGDMNVLKD---ACLSFARD 128
PEW + L GY + +G + SE G + L ACL+ AR+
Sbjct: 93 PEWTELLQSLSKAGYFSD----------SGSISGLESEFFPGFPDELLRPALACLALARE 152
Query: 129 RYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRAY 188
R ++ + LS D++ +V++G P LF+ +S KR+ Y++ + ++
Sbjct: 153 RPELLEMLSRRDVEVLVENGKPFLFKTGPDSLKRMSLYLRSGLQGIGKLMDME------- 212
Query: 189 VILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSELSEKPH 248
A TVD+ RL+L+Y +D + S K +E +E SVR LLS+++++S +P
Sbjct: 213 --------KASTVDLMRLILSYVVD-VASSEESKQHNKEIMESSVRSLLSQIAKMSLRPP 272
Query: 249 DAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCLKCNEDG 308
++ S ++ + +VEMKRGDW+C++C+ +NFARN +C +C+E
Sbjct: 273 ESNVHDTMQNQYSDRDGQG---VRSFQNNVEMKRGDWICSRCSGMNFARNVKCFQCDEAR 332
Query: 309 PKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPK 347
PKR ++ +W CP+C F N+ RN+ CL+C + P+
Sbjct: 333 PKR------QLTGSEWECPQCDFYNYGRNVACLRCDCKRPR 338
BLAST of Lcy03g017270 vs. ExPASy Swiss-Prot
Match:
Q9ERU9 (E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2)
HSP 1 Score: 58.9 bits (141), Expect = 1.6e-07
Identity = 43/181 (23.76%), Postives = 55/181 (30.39%), Query Frame = 0
Query: 282 WMCAKCNFLNFARNKRCLKCNEDGPKRVR-------------------------TDEIEM 341
W C C+F N A K+C+ C P +
Sbjct: 1350 WNCNSCSFKNAATAKKCVSCQNTNPTSNKELLGPPLVENGFAPKTGLENAQDRFATMTAN 1409
Query: 342 KSGDWICPECKFMNFYRNILCLKCKT-----------------EGPKKINVD---EIEMK 401
K G W C C N C+ C+ + PK ++ D K
Sbjct: 1410 KEGHWDCSVCLVRNEPTVSRCIACQNTKSASSFVQTSFKFGQGDLPKSVDSDFRSVFSKK 1469
Query: 402 KGDWVCPQCSFMNFASKKKCLRCREHRPKRELNPG----EWECPSCDFLNYRGNMACRKC 414
+G W C C N S KKC+ C NPG EW C C N + C C
Sbjct: 1470 EGQWECSVCLVRNERSAKKCVACE--------NPGKQFKEWHCSLCSVKNEAHAIKCVAC 1522
BLAST of Lcy03g017270 vs. ExPASy Swiss-Prot
Match:
O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)
HSP 1 Score: 48.5 bits (114), Expect = 2.2e-04
Identity = 34/154 (22.08%), Postives = 53/154 (34.42%), Query Frame = 0
Query: 280 GDWMCAKCNFLNFARNKRCLKCNEDGPKRVRTDEIEMKSGDWICPECKFMNFYRNILCLK 339
GDW C C F NF R C +C+ GP V + P+ + N Y N
Sbjct: 345 GDWNCPMCGFSNFQRRTSCFRCSFPGPTHVSA----ATGSNTFSPDFPYGNSYGNGSSHF 404
Query: 340 CKTEGPKKINVDEIEMKKGDWVCPQCSFMNFASKKKCLRCREHRPKRE------LNPGEW 399
G + +E M+ + + H R G+W
Sbjct: 405 IANYGGSVHHSNENTMQS-----------DLQHQNGNNAVNHHHSSRSFGGNVPFRAGDW 464
Query: 400 ECPS--CDFLNYRGNMACRKCNGERPKQEISAEY 426
+C S C + N+ N+ C +C R + A++
Sbjct: 465 KCGSEGCGYHNFAKNVCCLRCGASRATAAVVADH 483
BLAST of Lcy03g017270 vs. ExPASy TrEMBL
Match:
A0A6J1JH77 (zinc finger protein VAR3, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485691 PE=4 SV=1)
HSP 1 Score: 785.8 bits (2028), Expect = 9.3e-224
Identity = 371/436 (85.09%), Postives = 396/436 (90.83%), Query Frame = 0
Query: 1 MSAPKFLHFGTAISRTTSRALSPLLFPRRFPPKLISVIKCSSSTALDSAGSGGTDAPQPH 60
MSAPKF++FGTAISRTTSRALSPLLFPRR PPKLIS IKCSSST LDSA SGG DA Q +
Sbjct: 1 MSAPKFMYFGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTGLDSASSGGADASQSY 60
Query: 61 SSLIHHPWPEWVSFVDGLKTKGYLIEPPSEDANGDGTGGDAATPSETDYGDMNVLKDACL 120
S L HHPWPEWVSFVDGL+TKGYL+EP ED NGDG+GGDA T S DY DMNVLKDACL
Sbjct: 61 SGLTHHPWPEWVSFVDGLRTKGYLVEPTVEDGNGDGSGGDATTTSVNDYNDMNVLKDACL 120
Query: 121 SFARDRYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
+FAR+RYDIFKSLSTDDIQT+VKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 NFARERYDIFKSLSTDDIQTLVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSEL 240
C RAYVILKETEATARTVDIARLLLTYAL+P+VLSGGDKP GREHVEVS RKLLSEL EL
Sbjct: 181 CGRAYVILKETEATARTVDIARLLLTYALEPVVLSGGDKPPGREHVEVSARKLLSELLEL 240
Query: 241 SEKPHDAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCLK 300
SEKP DA+AVK D KS RKEKPSKFT DALSQDVEMKRGDWMC KCNFLNF+RN++CLK
Sbjct: 241 SEKPIDASAVKADTKSTRRKEKPSKFTDDALSQDVEMKRGDWMCTKCNFLNFSRNRKCLK 300
Query: 301 CNEDGPKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPKKINVDEIEMKKGDW 360
CNEDGPKRV D+IEMK+GDWICPECKFMNF RN+ CLKCKTEGPKKI+V EIEMKKGDW
Sbjct: 301 CNEDGPKRVHADDIEMKNGDWICPECKFMNFSRNVNCLKCKTEGPKKIDVGEIEMKKGDW 360
Query: 361 VCPQCSFMNFASKKKCLRCREHRPKRELNPGEWECPSCDFLNYRGNMACRKCNGERPKQE 420
VCP+C+FMNFAS KKCLRCREHRPKRE+NPGEWECPSCDFLNYR NM CRKC+GERPK+
Sbjct: 361 VCPKCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRRNMVCRKCDGERPKRG 420
Query: 421 ISAEYEEQLWDSPRER 437
S EYEEQLW+SPR R
Sbjct: 421 ASDEYEEQLWESPRGR 436
BLAST of Lcy03g017270 vs. ExPASy TrEMBL
Match:
A0A6J1C0Y6 (zinc finger protein VAR3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007446 PE=4 SV=1)
HSP 1 Score: 785.4 bits (2027), Expect = 1.2e-223
Identity = 375/437 (85.81%), Postives = 397/437 (90.85%), Query Frame = 0
Query: 1 MSAPKFLHFGTAISRTTSRALSPLLFPRRFPPKLISVIKCSSSTALDSAGSGGTDAPQPH 60
MSAPKFL+FGTAISRTTSRALSPLL PRRFPPKL+ + CSSSTA DSA SGG DAPQ
Sbjct: 1 MSAPKFLYFGTAISRTTSRALSPLLLPRRFPPKLLRFVNCSSSTAPDSATSGGADAPQQL 60
Query: 61 SSLIHHPWPEWVSFVDGLKTKGYLIE-PPSEDANGDGTGGDAATPSETDYGDMNVLKDAC 120
S+L HHPWPEWVSFVDGLKTKGYL E PSEDA+G G GGD AT SE Y DMNVLKDAC
Sbjct: 61 STLTHHPWPEWVSFVDGLKTKGYLTESSPSEDADGGGGGGDGATASENVYSDMNVLKDAC 120
Query: 121 LSFARDRYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRG 180
LSFARDRYD+FKSLSTDDIQTVVK GCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRG
Sbjct: 121 LSFARDRYDVFKSLSTDDIQTVVKGGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRG 180
Query: 181 SCDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSE 240
SCDRAYVILKE EATARTVDIAR+LLTYALDPLVLSGGDKP GREHVEVSVRKLLS+LSE
Sbjct: 181 SCDRAYVILKEPEATARTVDIARMLLTYALDPLVLSGGDKPLGREHVEVSVRKLLSKLSE 240
Query: 241 LSEKPHDAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCL 300
LSEKP D+A K D KSPSRKEK SKFT DALS+DVEMKRGDWMC KCNFLNF+RN+RCL
Sbjct: 241 LSEKPLDSAIEKADTKSPSRKEKTSKFTNDALSKDVEMKRGDWMCTKCNFLNFSRNRRCL 300
Query: 301 KCNEDGPKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPKKINVDEIEMKKGD 360
+CNEDGPKRVR DEIEMKSGDW CPEC FMNF RNI CLKCK EGPK++N DEIEMKKGD
Sbjct: 301 ECNEDGPKRVRADEIEMKSGDWTCPECNFMNFSRNIRCLKCKAEGPKRMNDDEIEMKKGD 360
Query: 361 WVCPQCSFMNFASKKKCLRCREHRPKRELNPGEWECPSCDFLNYRGNMACRKCNGERPKQ 420
W+CPQC+FMNFAS KKCLRCREHRPKR+LNPGEWECPSCDFLNYR NM+CRKCNGERPKQ
Sbjct: 361 WICPQCAFMNFASNKKCLRCREHRPKRDLNPGEWECPSCDFLNYRRNMSCRKCNGERPKQ 420
Query: 421 EISAEYEEQLWDSPRER 437
EIS+EYE+QLW+SPRER
Sbjct: 421 EISSEYEDQLWESPRER 437
BLAST of Lcy03g017270 vs. ExPASy TrEMBL
Match:
A0A0A0LPQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025120 PE=4 SV=1)
HSP 1 Score: 778.1 bits (2008), Expect = 1.9e-221
Identity = 364/435 (83.68%), Postives = 395/435 (90.80%), Query Frame = 0
Query: 1 MSAPKFLHFGTAISRTTSRALSPLLFPRRFPPKLISVIKCSSSTALDSAGSGGTDAPQPH 60
M+APKFL+ GTAISRTTSRALSP LFPRR P K IS +KCSSST LDS GSGG DAPQPH
Sbjct: 1 MAAPKFLYMGTAISRTTSRALSPFLFPRRLPSKFISFMKCSSSTVLDSVGSGGADAPQPH 60
Query: 61 SSLIHHPWPEWVSFVDGLKTKGYLIEPPSEDANGDGTGGDAATPSETDYGDMNVLKDACL 120
S+L HHPWPEWVSFVDGLKTKGYLIEPPSEDA GDGTGG+AATP DY DMNVLKDAC+
Sbjct: 61 STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGEAATPPVIDYSDMNVLKDACV 120
Query: 121 SFARDRYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
SFARDR+DIFKSLSTDDIQT+VKDGCPNL RK VNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 SFARDRFDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSEL 240
CDRAYVILK+T+ TARTVD+ARLLL YALDPLVLSGGDKPSGREHVEVSVRKLLS+LSEL
Sbjct: 181 CDRAYVILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSEL 240
Query: 241 SEKPHDAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCLK 300
SEKP D AAV+ K P+RKEK SKFT+DA ++DVEMKRGDWMC KCNFLNF+RN+ CLK
Sbjct: 241 SEKPIDPAAVREVTKPPTRKEKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCLK 300
Query: 301 CNEDGPKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPKKINVDEIEMKKGDW 360
CNEDGPKRVR ++IEMKSGDWICPECKFMNF RNI C+KCKTEGPKK+NV++ EMKKGDW
Sbjct: 301 CNEDGPKRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGDW 360
Query: 361 VCPQCSFMNFASKKKCLRCREHRPKRELNPGEWECPSCDFLNYRGNMACRKCNGERPKQE 420
VCPQCSFMNFAS KKCLRCRE RPKRELN GEWECP C ++N+RGNM+CRKCN ERP+QE
Sbjct: 361 VCPQCSFMNFASNKKCLRCRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERPEQE 420
Query: 421 ISAEYEEQLWDSPRE 436
IS EYEEQLW+SPRE
Sbjct: 421 ISDEYEEQLWESPRE 435
BLAST of Lcy03g017270 vs. ExPASy TrEMBL
Match:
A0A5D3DYH9 (Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001330 PE=4 SV=1)
HSP 1 Score: 770.4 bits (1988), Expect = 4.0e-219
Identity = 363/436 (83.26%), Postives = 392/436 (89.91%), Query Frame = 0
Query: 1 MSAPKFLHFGTAISRTTSRALSPLLFPRRFPPKLISVIKCSSSTALDSAGSGGTDAPQPH 60
M+APKFLH GTAISRTTS ALSP LFPRR P KLIS +KCSSST LDS GSGG DAPQ H
Sbjct: 1 MAAPKFLHIGTAISRTTSGALSPFLFPRRLPSKLISFMKCSSSTVLDSVGSGGADAPQLH 60
Query: 61 SSLIHHPWPEWVSFVDGLKTKGYLIEPPSEDANGDGTGGDAATPSETDYGDMNVLKDACL 120
S+L HHPWPEWVSFVDGLKTKGYLIEPPSEDA GDGTGGD ATP DY DMNVLKDAC+
Sbjct: 61 STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGDEATPPANDYSDMNVLKDACV 120
Query: 121 SFARDRYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
SFARDRYDIFKSLSTDDIQT+VKDGCPN+ RKVVNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 SFARDRYDIFKSLSTDDIQTIVKDGCPNILRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSEL 240
CDRAYVILK+T+ TARTVDIAR+LL YALDP+V+SGGDKPSGRE VEVSVRKLLSELSEL
Sbjct: 181 CDRAYVILKQTDGTARTVDIARVLLAYALDPVVMSGGDKPSGRERVEVSVRKLLSELSEL 240
Query: 241 SEKPHDAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCLK 300
SEKP D AAVK +KSP RKEK SKF +DA +QDVEMKRGDWMC KCNFLNFARN+RCLK
Sbjct: 241 SEKPIDPAAVKEVIKSPKRKEKSSKFIEDASTQDVEMKRGDWMCTKCNFLNFARNRRCLK 300
Query: 301 CNEDGPKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPKKINVDEIEMKKGDW 360
CNEDGPKRV ++IEMK+GDWICPEC FMNF RNI C+KCKTEGPKK+NVD +EMKKGDW
Sbjct: 301 CNEDGPKRVWENDIEMKNGDWICPECNFMNFSRNIRCMKCKTEGPKKVNVDNVEMKKGDW 360
Query: 361 VCPQCSFMNFASKKKCLRCREHRPKRELNPGEWECPSCDFLNYRGNMACRKCNGERPKQE 420
VCPQCSFMNFAS KKCLRCR RPKRELN GEWECPSC ++N+RGN +CRKCN ERP++E
Sbjct: 361 VCPQCSFMNFASNKKCLRCRVLRPKRELNQGEWECPSCVYVNFRGNTSCRKCNVERPERE 420
Query: 421 ISAEYEEQLWDSPRER 437
IS EY+EQLW+SPRER
Sbjct: 421 ISDEYDEQLWESPRER 436
BLAST of Lcy03g017270 vs. ExPASy TrEMBL
Match:
A0A1S3BX61 (zinc finger protein VAR3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494186 PE=4 SV=1)
HSP 1 Score: 770.4 bits (1988), Expect = 4.0e-219
Identity = 363/436 (83.26%), Postives = 392/436 (89.91%), Query Frame = 0
Query: 1 MSAPKFLHFGTAISRTTSRALSPLLFPRRFPPKLISVIKCSSSTALDSAGSGGTDAPQPH 60
M+APKFLH GTAISRTTS ALSP LFPRR P KLIS +KCSSST LDS GSGG DAPQ H
Sbjct: 1 MAAPKFLHIGTAISRTTSGALSPFLFPRRLPSKLISFMKCSSSTVLDSVGSGGADAPQLH 60
Query: 61 SSLIHHPWPEWVSFVDGLKTKGYLIEPPSEDANGDGTGGDAATPSETDYGDMNVLKDACL 120
S+L HHPWPEWVSFVDGLKTKGYLIEPPSEDA GDGTGGD ATP DY DMNVLKDAC+
Sbjct: 61 STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGDEATPPANDYSDMNVLKDACV 120
Query: 121 SFARDRYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
SFARDRYDIFKSLSTDDIQT+VKDGCPN+ RKVVNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 SFARDRYDIFKSLSTDDIQTIVKDGCPNILRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSEL 240
CDRAYVILK+T+ TARTVDIAR+LL YALDP+V+SGGDKPSGRE VEVSVRKLLSELSEL
Sbjct: 181 CDRAYVILKQTDGTARTVDIARVLLAYALDPVVMSGGDKPSGRERVEVSVRKLLSELSEL 240
Query: 241 SEKPHDAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCLK 300
SEKP D AAVK +KSP RKEK SKF +DA +QDVEMKRGDWMC KCNFLNFARN+RCLK
Sbjct: 241 SEKPIDPAAVKEVIKSPKRKEKSSKFIEDASTQDVEMKRGDWMCTKCNFLNFARNRRCLK 300
Query: 301 CNEDGPKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPKKINVDEIEMKKGDW 360
CNEDGPKRV ++IEMK+GDWICPEC FMNF RNI C+KCKTEGPKK+NVD +EMKKGDW
Sbjct: 301 CNEDGPKRVWENDIEMKNGDWICPECNFMNFSRNIRCMKCKTEGPKKVNVDNVEMKKGDW 360
Query: 361 VCPQCSFMNFASKKKCLRCREHRPKRELNPGEWECPSCDFLNYRGNMACRKCNGERPKQE 420
VCPQCSFMNFAS KKCLRCR RPKRELN GEWECPSC ++N+RGN +CRKCN ERP++E
Sbjct: 361 VCPQCSFMNFASNKKCLRCRVLRPKRELNQGEWECPSCVYVNFRGNTSCRKCNVERPERE 420
Query: 421 ISAEYEEQLWDSPRER 437
IS EY+EQLW+SPRER
Sbjct: 421 ISDEYDEQLWESPRER 436
BLAST of Lcy03g017270 vs. NCBI nr
Match:
XP_038878457.1 (zinc finger protein VAR3, chloroplastic [Benincasa hispida])
HSP 1 Score: 811.6 bits (2095), Expect = 3.3e-231
Identity = 384/436 (88.07%), Postives = 407/436 (93.35%), Query Frame = 0
Query: 1 MSAPKFLHFGTAISRTTSRALSPLLFPRRFPPKLISVIKCSSSTALDSAGSGGTDAPQPH 60
M+APKFLH GT+ISRTTSRALSPLLFPRR PPKLIS IK SST LDSAGSGG DAPQPH
Sbjct: 1 MAAPKFLHVGTSISRTTSRALSPLLFPRRLPPKLISFIKRISSTVLDSAGSGGPDAPQPH 60
Query: 61 SSLIHHPWPEWVSFVDGLKTKGYLIEPPSEDANGDGTGGDAATPSETDYGDMNVLKDACL 120
S+L HHPWPEWVSFVDGL+TKGYLIEPPSEDA DGTGG+AATPS TDY DMNVLK+AC+
Sbjct: 61 STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDATEDGTGGEAATPSVTDYSDMNVLKNACI 120
Query: 121 SFARDRYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
SFARDRYDIFKSLSTDDIQT+VKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 SFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSEL 240
CDRAYV LKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSEL
Sbjct: 181 CDRAYVFLKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSEL 240
Query: 241 SEKPHDAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCLK 300
SEKP D AAVK D KSP RKEKPSKFT DA +QDVEMKRGDWMC KCNFLNF+RN+RCLK
Sbjct: 241 SEKPLDPAAVKDDTKSPPRKEKPSKFTNDASTQDVEMKRGDWMCTKCNFLNFSRNRRCLK 300
Query: 301 CNEDGPKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPKKINVDEIEMKKGDW 360
CNEDGPKRV ++IEMKSGDWICPEC FMNF RNI CLKCKTEGP+K+N +EIEMKKGDW
Sbjct: 301 CNEDGPKRVWANDIEMKSGDWICPECNFMNFSRNIRCLKCKTEGPRKLNGEEIEMKKGDW 360
Query: 361 VCPQCSFMNFASKKKCLRCREHRPKRELNPGEWECPSCDFLNYRGNMACRKCNGERPKQE 420
VCPQC+FMNFA+ KKCLRCR+HRPKRE+NPGEWECPSCDFLNYRGNM+CRKCN ERPKQ+
Sbjct: 361 VCPQCTFMNFANNKKCLRCRKHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQK 420
Query: 421 ISAEYEEQLWDSPRER 437
ISAEYEEQLW+SPRER
Sbjct: 421 ISAEYEEQLWESPRER 436
BLAST of Lcy03g017270 vs. NCBI nr
Match:
XP_022988446.1 (zinc finger protein VAR3, chloroplastic isoform X1 [Cucurbita maxima])
HSP 1 Score: 785.8 bits (2028), Expect = 1.9e-223
Identity = 371/436 (85.09%), Postives = 396/436 (90.83%), Query Frame = 0
Query: 1 MSAPKFLHFGTAISRTTSRALSPLLFPRRFPPKLISVIKCSSSTALDSAGSGGTDAPQPH 60
MSAPKF++FGTAISRTTSRALSPLLFPRR PPKLIS IKCSSST LDSA SGG DA Q +
Sbjct: 1 MSAPKFMYFGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTGLDSASSGGADASQSY 60
Query: 61 SSLIHHPWPEWVSFVDGLKTKGYLIEPPSEDANGDGTGGDAATPSETDYGDMNVLKDACL 120
S L HHPWPEWVSFVDGL+TKGYL+EP ED NGDG+GGDA T S DY DMNVLKDACL
Sbjct: 61 SGLTHHPWPEWVSFVDGLRTKGYLVEPTVEDGNGDGSGGDATTTSVNDYNDMNVLKDACL 120
Query: 121 SFARDRYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
+FAR+RYDIFKSLSTDDIQT+VKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 NFARERYDIFKSLSTDDIQTLVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSEL 240
C RAYVILKETEATARTVDIARLLLTYAL+P+VLSGGDKP GREHVEVS RKLLSEL EL
Sbjct: 181 CGRAYVILKETEATARTVDIARLLLTYALEPVVLSGGDKPPGREHVEVSARKLLSELLEL 240
Query: 241 SEKPHDAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCLK 300
SEKP DA+AVK D KS RKEKPSKFT DALSQDVEMKRGDWMC KCNFLNF+RN++CLK
Sbjct: 241 SEKPIDASAVKADTKSTRRKEKPSKFTDDALSQDVEMKRGDWMCTKCNFLNFSRNRKCLK 300
Query: 301 CNEDGPKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPKKINVDEIEMKKGDW 360
CNEDGPKRV D+IEMK+GDWICPECKFMNF RN+ CLKCKTEGPKKI+V EIEMKKGDW
Sbjct: 301 CNEDGPKRVHADDIEMKNGDWICPECKFMNFSRNVNCLKCKTEGPKKIDVGEIEMKKGDW 360
Query: 361 VCPQCSFMNFASKKKCLRCREHRPKRELNPGEWECPSCDFLNYRGNMACRKCNGERPKQE 420
VCP+C+FMNFAS KKCLRCREHRPKRE+NPGEWECPSCDFLNYR NM CRKC+GERPK+
Sbjct: 361 VCPKCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRRNMVCRKCDGERPKRG 420
Query: 421 ISAEYEEQLWDSPRER 437
S EYEEQLW+SPR R
Sbjct: 421 ASDEYEEQLWESPRGR 436
BLAST of Lcy03g017270 vs. NCBI nr
Match:
XP_022135506.1 (zinc finger protein VAR3, chloroplastic [Momordica charantia])
HSP 1 Score: 785.4 bits (2027), Expect = 2.5e-223
Identity = 375/437 (85.81%), Postives = 397/437 (90.85%), Query Frame = 0
Query: 1 MSAPKFLHFGTAISRTTSRALSPLLFPRRFPPKLISVIKCSSSTALDSAGSGGTDAPQPH 60
MSAPKFL+FGTAISRTTSRALSPLL PRRFPPKL+ + CSSSTA DSA SGG DAPQ
Sbjct: 1 MSAPKFLYFGTAISRTTSRALSPLLLPRRFPPKLLRFVNCSSSTAPDSATSGGADAPQQL 60
Query: 61 SSLIHHPWPEWVSFVDGLKTKGYLIE-PPSEDANGDGTGGDAATPSETDYGDMNVLKDAC 120
S+L HHPWPEWVSFVDGLKTKGYL E PSEDA+G G GGD AT SE Y DMNVLKDAC
Sbjct: 61 STLTHHPWPEWVSFVDGLKTKGYLTESSPSEDADGGGGGGDGATASENVYSDMNVLKDAC 120
Query: 121 LSFARDRYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRG 180
LSFARDRYD+FKSLSTDDIQTVVK GCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRG
Sbjct: 121 LSFARDRYDVFKSLSTDDIQTVVKGGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRG 180
Query: 181 SCDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSE 240
SCDRAYVILKE EATARTVDIAR+LLTYALDPLVLSGGDKP GREHVEVSVRKLLS+LSE
Sbjct: 181 SCDRAYVILKEPEATARTVDIARMLLTYALDPLVLSGGDKPLGREHVEVSVRKLLSKLSE 240
Query: 241 LSEKPHDAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCL 300
LSEKP D+A K D KSPSRKEK SKFT DALS+DVEMKRGDWMC KCNFLNF+RN+RCL
Sbjct: 241 LSEKPLDSAIEKADTKSPSRKEKTSKFTNDALSKDVEMKRGDWMCTKCNFLNFSRNRRCL 300
Query: 301 KCNEDGPKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPKKINVDEIEMKKGD 360
+CNEDGPKRVR DEIEMKSGDW CPEC FMNF RNI CLKCK EGPK++N DEIEMKKGD
Sbjct: 301 ECNEDGPKRVRADEIEMKSGDWTCPECNFMNFSRNIRCLKCKAEGPKRMNDDEIEMKKGD 360
Query: 361 WVCPQCSFMNFASKKKCLRCREHRPKRELNPGEWECPSCDFLNYRGNMACRKCNGERPKQ 420
W+CPQC+FMNFAS KKCLRCREHRPKR+LNPGEWECPSCDFLNYR NM+CRKCNGERPKQ
Sbjct: 361 WICPQCAFMNFASNKKCLRCREHRPKRDLNPGEWECPSCDFLNYRRNMSCRKCNGERPKQ 420
Query: 421 EISAEYEEQLWDSPRER 437
EIS+EYE+QLW+SPRER
Sbjct: 421 EISSEYEDQLWESPRER 437
BLAST of Lcy03g017270 vs. NCBI nr
Match:
XP_004137347.1 (zinc finger protein VAR3, chloroplastic [Cucumis sativus] >KGN63880.1 hypothetical protein Csa_013228 [Cucumis sativus])
HSP 1 Score: 778.1 bits (2008), Expect = 4.0e-221
Identity = 364/435 (83.68%), Postives = 395/435 (90.80%), Query Frame = 0
Query: 1 MSAPKFLHFGTAISRTTSRALSPLLFPRRFPPKLISVIKCSSSTALDSAGSGGTDAPQPH 60
M+APKFL+ GTAISRTTSRALSP LFPRR P K IS +KCSSST LDS GSGG DAPQPH
Sbjct: 1 MAAPKFLYMGTAISRTTSRALSPFLFPRRLPSKFISFMKCSSSTVLDSVGSGGADAPQPH 60
Query: 61 SSLIHHPWPEWVSFVDGLKTKGYLIEPPSEDANGDGTGGDAATPSETDYGDMNVLKDACL 120
S+L HHPWPEWVSFVDGLKTKGYLIEPPSEDA GDGTGG+AATP DY DMNVLKDAC+
Sbjct: 61 STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGEAATPPVIDYSDMNVLKDACV 120
Query: 121 SFARDRYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
SFARDR+DIFKSLSTDDIQT+VKDGCPNL RK VNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 121 SFARDRFDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSEL 240
CDRAYVILK+T+ TARTVD+ARLLL YALDPLVLSGGDKPSGREHVEVSVRKLLS+LSEL
Sbjct: 181 CDRAYVILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSEL 240
Query: 241 SEKPHDAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCLK 300
SEKP D AAV+ K P+RKEK SKFT+DA ++DVEMKRGDWMC KCNFLNF+RN+ CLK
Sbjct: 241 SEKPIDPAAVREVTKPPTRKEKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCLK 300
Query: 301 CNEDGPKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPKKINVDEIEMKKGDW 360
CNEDGPKRVR ++IEMKSGDWICPECKFMNF RNI C+KCKTEGPKK+NV++ EMKKGDW
Sbjct: 301 CNEDGPKRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGDW 360
Query: 361 VCPQCSFMNFASKKKCLRCREHRPKRELNPGEWECPSCDFLNYRGNMACRKCNGERPKQE 420
VCPQCSFMNFAS KKCLRCRE RPKRELN GEWECP C ++N+RGNM+CRKCN ERP+QE
Sbjct: 361 VCPQCSFMNFASNKKCLRCRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERPEQE 420
Query: 421 ISAEYEEQLWDSPRE 436
IS EYEEQLW+SPRE
Sbjct: 421 ISDEYEEQLWESPRE 435
BLAST of Lcy03g017270 vs. NCBI nr
Match:
KAG6589639.1 (Zinc finger protein VAR3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 774.6 bits (1999), Expect = 4.4e-220
Identity = 364/436 (83.49%), Postives = 395/436 (90.60%), Query Frame = 0
Query: 1 MSAPKFLHFGTAISRTTSRALSPLLFPRRFPPKLISVIKCSSSTALDSAGSGGTDAPQPH 60
MSAPKF++FGTAISRTTSRALSPLLFPRR PPKLIS+IKCSSST LDSA SGG DA Q +
Sbjct: 17 MSAPKFMYFGTAISRTTSRALSPLLFPRRLPPKLISLIKCSSSTGLDSASSGGADASQSY 76
Query: 61 SSLIHHPWPEWVSFVDGLKTKGYLIEPPSEDANGDGTGGDAATPSETDYGDMNVLKDACL 120
S L HHPWPEWVSFVD L+TKGYL+EP EDANGDG+GGD AT S DY DMNVLKDACL
Sbjct: 77 SGLTHHPWPEWVSFVDALRTKGYLVEPNVEDANGDGSGGDVATTSVNDYNDMNVLKDACL 136
Query: 121 SFARDRYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
+FAR+RYD+FKSLSTDDIQT+VKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS
Sbjct: 137 NFARERYDVFKSLSTDDIQTLVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 196
Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSEL 240
C RAYVILKETEATARTVD+ARLLLTYAL+P+VLSGGDKP GREHVEVS RKLLSEL EL
Sbjct: 197 CGRAYVILKETEATARTVDVARLLLTYALEPVVLSGGDKPPGREHVEVSARKLLSELLEL 256
Query: 241 SEKPHDAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCLK 300
SEKP DA+AVK D KS RKEKPSKFT DALSQ+VEMKRGDWMC KCNFLNF+RN++CLK
Sbjct: 257 SEKPIDASAVKPDTKSTRRKEKPSKFTDDALSQNVEMKRGDWMCTKCNFLNFSRNRKCLK 316
Query: 301 CNEDGPKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPKKINVDEIEMKKGDW 360
CNEDGPKRVR D+IEMK+GDWICPEC FMNF RN+ CLKCKTE PKKI+V EIEMKKGDW
Sbjct: 317 CNEDGPKRVRADDIEMKNGDWICPECNFMNFSRNVNCLKCKTERPKKIDVGEIEMKKGDW 376
Query: 361 VCPQCSFMNFASKKKCLRCREHRPKRELNPGEWECPSCDFLNYRGNMACRKCNGERPKQE 420
+CP+C+FMNFAS KKCLRCREHRPKRE+NPGEW+CPSCDFLNYR NM CR+C+GERPK
Sbjct: 377 ICPKCTFMNFASNKKCLRCREHRPKREMNPGEWKCPSCDFLNYRPNMVCRQCDGERPKGG 436
Query: 421 ISAEYEEQLWDSPRER 437
S EYEEQLW+SPR R
Sbjct: 437 ASEEYEEQLWESPRGR 452
BLAST of Lcy03g017270 vs. TAIR 10
Match:
AT1G48570.1 (zinc finger (Ran-binding) family protein )
HSP 1 Score: 401.4 bits (1030), Expect = 9.5e-112
Identity = 222/476 (46.64%), Postives = 285/476 (59.87%), Query Frame = 0
Query: 1 MSAPKFLHFGTAISRTTSRALSPLLFPRRFPPKLISVIKCSSSTALDSAGSGGTDAPQPH 60
MS+ + G +I R + PL F RFP + +C SS D+A + T
Sbjct: 1 MSSSRIFLVGNSIFRPHKPSF-PLSF-NRFPSVSLR-FRCFSS---DAAAAVATTVDSDS 60
Query: 61 SSLIHHPWPEWVSFVDGLKTKGYLIEPPSEDANGDGTGGDAATPSETDYGDMNVLKDACL 120
SL HPWPEW++FVD LKTKGY + +D T Y +M ++KDACL
Sbjct: 61 PSLTPHPWPEWITFVDRLKTKGYFTKDTEDD---------------TVYQEMILVKDACL 120
Query: 121 SFARDRYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180
SFARDRYD+ +SLS+ D+Q +V+ GCPNLFRK VNS+KR+RA+V+L+EGDVC +C+LR S
Sbjct: 121 SFARDRYDVLRSLSSGDVQALVERGCPNLFRKTVNSSKRIRAHVKLNEGDVCGSCDLRSS 180
Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSEL 240
CDRAYVILK+TEA ARTVD+ RLLL ALD +V+S G+ P G+E V S R+LL EL E
Sbjct: 181 CDRAYVILKDTEADARTVDVMRLLLFNALDSIVISRGEVPPGKELVHESARRLLLELVEF 240
Query: 241 SEKP-------------------------HDAAAVKVDMKS-----------PSRKEKPS 300
SEKP +D + +V KS SR ++PS
Sbjct: 241 SEKPLIPALPKPSSKESSLPSKERAFKSRNDEPSQRVAFKSRNDDPSQRVAFKSRNDEPS 300
Query: 301 -----KFTKDALSQ-DVEMKRGDWMCAKCNFLNFARNKRCLKCNEDGPKRVRTDEIEMKS 360
K D SQ D + DW C KC+F+NFARN+RC +CNE +R + K
Sbjct: 301 HRVAFKSRNDESSQRDRPLYSADWACPKCDFVNFARNERCRECNEVADRRPVAAVV--KE 360
Query: 361 GDWICPECKFMNFYRNILCLKCKTEGPKKIN-VDEIEMKKGDWVCPQCSFMNFASKKKCL 420
GDW+CPEC F+NF RN CLKCK +GPKK + V+ +EMKKGDW C C +MNFAS K+C
Sbjct: 361 GDWLCPECSFLNFTRNQSCLKCKAKGPKKTSMVNIVEMKKGDWNCTGCGYMNFASNKQCR 420
Query: 421 RCREHRPKRELNPGEWECPSCDFLNYRGNMACRKCNGERPKQEISAEYEEQLWDSP 434
CRE R K PG+WECPSCDF+N+R N AC+KC +RP Q + + E+ W P
Sbjct: 421 ECREQRHKTLAEPGDWECPSCDFVNFRRNDACKKCECKRPSQ-ANNDQEDHTWKRP 452
BLAST of Lcy03g017270 vs. TAIR 10
Match:
AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )
HSP 1 Score: 248.4 bits (633), Expect = 1.0e-65
Identity = 132/353 (37.39%), Postives = 197/353 (55.81%), Query Frame = 0
Query: 66 HPWPEWVSFVDGLKTKGYLIEPPSEDANGDGTGGDAATPSETDYGDMNVLKDACLSFARD 125
HPWPEW+ + L KGY E + P + + N ++ ACL+FAR
Sbjct: 44 HPWPEWLDLMGMLAKKGYFEE--------------SLIPLMSS-KESNHIRTACLNFARH 103
Query: 126 RYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRAY 185
R+ + ++LS DI+ + GCP+ RKVVNS KRLRAYV +DEG+VC +CNLRG C+RAY
Sbjct: 104 RFTLVRNLSKKDIKVIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAY 163
Query: 186 VILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSELSEKPH 245
++ E ART+D+ RLLLTY LD + + ++ + VE SVRKLL E S
Sbjct: 164 AQARDDEG-ARTIDVMRLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLTDF 223
Query: 246 DAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCLKCNEDG 305
++A + ++ + +P+ ++D +D + GDW C +C FLNFA+N RCL+C+
Sbjct: 224 ESA----ETETAGDELQPN--SQDIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFS 283
Query: 306 PKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPKKINVDEIEMKKGDWVCPQC 365
+R++ + E K D + +KKGDW+C C
Sbjct: 284 EERLKQLKEEQK---------------------------------DHLPLKKGDWICQTC 341
Query: 366 SFMNFASKKKCLRCREHRPKRELNPGEWECPSCDFLNYRGNMACRKCNGERPK 419
+F+NF+ +CLRC++ R++NPGEWEC SC+++N+R N C KC+ +R K
Sbjct: 344 NFLNFSKNTRCLRCKDKPTLRQINPGEWECESCNYINFRRNSICLKCDHKRQK 341
BLAST of Lcy03g017270 vs. TAIR 10
Match:
AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )
HSP 1 Score: 248.4 bits (633), Expect = 1.0e-65
Identity = 132/353 (37.39%), Postives = 197/353 (55.81%), Query Frame = 0
Query: 66 HPWPEWVSFVDGLKTKGYLIEPPSEDANGDGTGGDAATPSETDYGDMNVLKDACLSFARD 125
HPWPEW+ + L KGY E + P + + N ++ ACL+FAR
Sbjct: 44 HPWPEWLDLMGMLAKKGYFEE--------------SLIPLMSS-KESNHIRTACLNFARH 103
Query: 126 RYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRAY 185
R+ + ++LS DI+ + GCP+ RKVVNS KRLRAYV +DEG+VC +CNLRG C+RAY
Sbjct: 104 RFTLVRNLSKKDIKVIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAY 163
Query: 186 VILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSELSEKPH 245
++ E ART+D+ RLLLTY LD + + ++ + VE SVRKLL E S
Sbjct: 164 AQARDDEG-ARTIDVMRLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLTDF 223
Query: 246 DAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCLKCNEDG 305
++A + ++ + +P+ ++D +D + GDW C +C FLNFA+N RCL+C+
Sbjct: 224 ESA----ETETAGDELQPN--SQDIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFS 283
Query: 306 PKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPKKINVDEIEMKKGDWVCPQC 365
+R++ + E K D + +KKGDW+C C
Sbjct: 284 EERLKQLKEEQK---------------------------------DHLPLKKGDWICQTC 341
Query: 366 SFMNFASKKKCLRCREHRPKRELNPGEWECPSCDFLNYRGNMACRKCNGERPK 419
+F+NF+ +CLRC++ R++NPGEWEC SC+++N+R N C KC+ +R K
Sbjct: 344 NFLNFSKNTRCLRCKDKPTLRQINPGEWECESCNYINFRRNSICLKCDHKRQK 341
BLAST of Lcy03g017270 vs. TAIR 10
Match:
AT1G55040.1 (zinc finger (Ran-binding) family protein )
HSP 1 Score: 213.0 bits (541), Expect = 4.8e-55
Identity = 117/294 (39.80%), Postives = 171/294 (58.16%), Query Frame = 0
Query: 66 HPWPEWVSFVDGLKTKGY-----------LIEPPSEDANGDGTGGDAATPSETDYGDMNV 125
HPWPEW+ ++ L + Y ++ D + G G D + D
Sbjct: 147 HPWPEWMELMERLVKQNYFDHRRERDDDDMVNSLGIDVSSVGLGED-ENVGVALFQDFRA 206
Query: 126 LKDACLSFARDRYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCST 185
+++AC +F +DR+DI +SLS +DIQ +V GCP RKVV S K LR V LDEGDVCS+
Sbjct: 207 VQNACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSS 266
Query: 186 CNLRGSCDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKP-SGREHVEVSVRKL 245
C+LR SC++A+ +L E ART+D+ R+L TY DPL + +K ++ V+ VRKL
Sbjct: 267 CSLRNSCEKAF-LLTNKEDEARTIDLMRILFTYGFDPLNGTVANKSLLKKKSVKSVVRKL 326
Query: 246 LSELSELSEKPHDA-AAVKVDMKSPSRKEKPSKFTKDALSQ-DVEMKRGDWMCAKCNFLN 305
L E+ +LS P D V ++P + ++P K + + DVEMK+GDW+C KC+F+N
Sbjct: 327 LHEIVKLSAVPIDPNLTPPVIKRAPPKVKQPPPTPKRRVGRDDVEMKKGDWLCPKCDFMN 386
Query: 306 FARNKRCLKCNEDGPKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGP 346
FA+N CL+C+ PKR ++ G+W CPEC F+N+ RN+ C C + P
Sbjct: 387 FAKNTICLQCDAKRPKR------QLLPGEWECPECNFLNYRRNMACFHCDCKRP 432
BLAST of Lcy03g017270 vs. TAIR 10
Match:
AT5G17790.1 (zinc finger (Ran-binding) family protein )
HSP 1 Score: 137.5 bits (345), Expect = 2.6e-32
Identity = 84/281 (29.89%), Postives = 143/281 (50.89%), Query Frame = 0
Query: 69 PEWVSFVDGLKTKGYLIEPPSEDANGDGTGGDAATPSETDYGDMNVLKD---ACLSFARD 128
PEW + L GY + +G + SE G + L ACL+ AR+
Sbjct: 93 PEWTELLQSLSKAGYFSD----------SGSISGLESEFFPGFPDELLRPALACLALARE 152
Query: 129 RYDIFKSLSTDDIQTVVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRAY 188
R ++ + LS D++ +V++G P LF+ +S KR+ Y++ + ++
Sbjct: 153 RPELLEMLSRRDVEVLVENGKPFLFKTGPDSLKRMSLYLRSGLQGIGKLMDME------- 212
Query: 189 VILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSELSEKPH 248
A TVD+ RL+L+Y +D + S K +E +E SVR LLS+++++S +P
Sbjct: 213 --------KASTVDLMRLILSYVVD-VASSEESKQHNKEIMESSVRSLLSQIAKMSLRPP 272
Query: 249 DAAAVKVDMKSPSRKEKPSKFTKDALSQDVEMKRGDWMCAKCNFLNFARNKRCLKCNEDG 308
++ S ++ + +VEMKRGDW+C++C+ +NFARN +C +C+E
Sbjct: 273 ESNVHDTMQNQYSDRDGQG---VRSFQNNVEMKRGDWICSRCSGMNFARNVKCFQCDEAR 332
Query: 309 PKRVRTDEIEMKSGDWICPECKFMNFYRNILCLKCKTEGPK 347
PKR ++ +W CP+C F N+ RN+ CL+C + P+
Sbjct: 333 PKR------QLTGSEWECPQCDFYNYGRNVACLRCDCKRPR 338
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8S9K3 | 3.6e-31 | 29.89 | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VAR3 ... | [more] |
Q9ERU9 | 1.6e-07 | 23.76 | E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 | [more] |
O13801 | 2.2e-04 | 22.08 | Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1JH77 | 9.3e-224 | 85.09 | zinc finger protein VAR3, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 G... | [more] |
A0A6J1C0Y6 | 1.2e-223 | 85.81 | zinc finger protein VAR3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111... | [more] |
A0A0A0LPQ6 | 1.9e-221 | 83.68 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025120 PE=4 SV=1 | [more] |
A0A5D3DYH9 | 4.0e-219 | 83.26 | Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
A0A1S3BX61 | 4.0e-219 | 83.26 | zinc finger protein VAR3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494186 ... | [more] |
Match Name | E-value | Identity | Description | |
XP_038878457.1 | 3.3e-231 | 88.07 | zinc finger protein VAR3, chloroplastic [Benincasa hispida] | [more] |
XP_022988446.1 | 1.9e-223 | 85.09 | zinc finger protein VAR3, chloroplastic isoform X1 [Cucurbita maxima] | [more] |
XP_022135506.1 | 2.5e-223 | 85.81 | zinc finger protein VAR3, chloroplastic [Momordica charantia] | [more] |
XP_004137347.1 | 4.0e-221 | 83.68 | zinc finger protein VAR3, chloroplastic [Cucumis sativus] >KGN63880.1 hypothetic... | [more] |
KAG6589639.1 | 4.4e-220 | 83.49 | Zinc finger protein VAR3, chloroplastic, partial [Cucurbita argyrosperma subsp. ... | [more] |