Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAACTTGAATCGGGAGGACCTGGAGCTCTCTATTCATTTGCTTTGGGGCATTTGGAAGAACAAAAACAGAGTCCTTCACAGCACTAGCTTGCCCAATCAAACTGTCAATGCAAGAAACTTAAACCCCATCATTACAGATTGTTTGGCCTTAAAGAGATCTAACCTGAATGCTCCGTCGGAGATCAATCTCAGTAGGGGGAAGAGCCAGCCGAGTCACGAGTATTGGAAGCCTCCGCCACTAGGATCGTGGAAATTAAATGTCGACGCCTCCTGGAACGCATCTCAGAACAGAGGAGGGGTGGGTTGGTCCATGCGTGACTCGTCAGGATCTCCAATCTTCTCGGGTTTCAGTCGAATTAACAAGAATTGGTCAGTCAAGTTTCTTGAGATGAGAGCGATCTTGGATGGGTTGAAAGTTTTACCGGCCATTAGAGCTTCGAGGTCGGATCTCTGCATCCCGCCGATCTCCGTTGAATCAGACGCTTTAAGCGTGATCAATCTCCTGAATGGAGAAGATGAGGACCTGACAGAAGCCTCGTTCTTGGCTGAAGATATCGCTGAGATGAGGAAGGTCGTGGAGGAGATCTCTTTTGAGTTTTGTCCGCGCGCCTGCAATGGTGATGCTCACCGGATGGCGCGAATTGCAGCTTTTGGGGTGTTCGGTCCCCCCCTGGATTTTTTTGGTACCTCTTCCAATTCGGAAGAGGTCTGGTTTTGTGGTATAGGGCTTGGGCCCGATTTCATTTACTCTTTGTATGAGACAACTGGTAGTGGTGGTTGA
mRNA sequence
ATGAGGAACTTGAATCGGGAGGACCTGGAGCTCTCTATTCATTTGCTTTGGGGCATTTGGAAGAACAAAAACAGAGTCCTTCACAGCACTAGCTTGCCCAATCAAACTGTCAATGCAAGAAACTTAAACCCCATCATTACAGATTGTTTGGCCTTAAAGAGATCTAACCTGAATGCTCCGTCGGAGATCAATCTCAGTAGGGGGAAGAGCCAGCCGAGTCACGAGTATTGGAAGCCTCCGCCACTAGGATCGTGGAAATTAAATGTCGACGCCTCCTGGAACGCATCTCAGAACAGAGGAGGGGTGGGTTGGTCCATGCGTGACTCGTCAGGATCTCCAATCTTCTCGGGTTTCAGTCGAATTAACAAGAATTGGTCAGTCAAGTTTCTTGAGATGAGAGCGATCTTGGATGGGTTGAAAGTTTTACCGGCCATTAGAGCTTCGAGGTCGGATCTCTGCATCCCGCCGATCTCCGTTGAATCAGACGCTTTAAGCGTGATCAATCTCCTGAATGGAGAAGATGAGGACCTGACAGAAGCCTCGTTCTTGGCTGAAGATATCGCTGAGATGAGGAAGGTCGTGGAGGAGATCTCTTTTGAGTTTTGTCCGCGCGCCTGCAATGGTGATGCTCACCGGATGGCGCGAATTGCAGCTTTTGGGGTGTTCGGTCCCCCCCTGGATTTTTTTGGTACCTCTTCCAATTCGGAAGAGGTCTGGTTTTGTGGTATAGGGCTTGGGCCCGATTTCATTTACTCTTTGTATGAGACAACTGGTAGTGGTGGTTGA
Coding sequence (CDS)
ATGAGGAACTTGAATCGGGAGGACCTGGAGCTCTCTATTCATTTGCTTTGGGGCATTTGGAAGAACAAAAACAGAGTCCTTCACAGCACTAGCTTGCCCAATCAAACTGTCAATGCAAGAAACTTAAACCCCATCATTACAGATTGTTTGGCCTTAAAGAGATCTAACCTGAATGCTCCGTCGGAGATCAATCTCAGTAGGGGGAAGAGCCAGCCGAGTCACGAGTATTGGAAGCCTCCGCCACTAGGATCGTGGAAATTAAATGTCGACGCCTCCTGGAACGCATCTCAGAACAGAGGAGGGGTGGGTTGGTCCATGCGTGACTCGTCAGGATCTCCAATCTTCTCGGGTTTCAGTCGAATTAACAAGAATTGGTCAGTCAAGTTTCTTGAGATGAGAGCGATCTTGGATGGGTTGAAAGTTTTACCGGCCATTAGAGCTTCGAGGTCGGATCTCTGCATCCCGCCGATCTCCGTTGAATCAGACGCTTTAAGCGTGATCAATCTCCTGAATGGAGAAGATGAGGACCTGACAGAAGCCTCGTTCTTGGCTGAAGATATCGCTGAGATGAGGAAGGTCGTGGAGGAGATCTCTTTTGAGTTTTGTCCGCGCGCCTGCAATGGTGATGCTCACCGGATGGCGCGAATTGCAGCTTTTGGGGTGTTCGGTCCCCCCCTGGATTTTTTTGGTACCTCTTCCAATTCGGAAGAGGTCTGGTTTTGTGGTATAGGGCTTGGGCCCGATTTCATTTACTCTTTGTATGAGACAACTGGTAGTGGTGGTTGA
Protein sequence
MRNLNREDLELSIHLLWGIWKNKNRVLHSTSLPNQTVNARNLNPIITDCLALKRSNLNAPSEINLSRGKSQPSHEYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFSGFSRINKNWSVKFLEMRAILDGLKVLPAIRASRSDLCIPPISVESDALSVINLLNGEDEDLTEASFLAEDIAEMRKVVEEISFEFCPRACNGDAHRMARIAAFGVFGPPLDFFGTSSNSEEVWFCGIGLGPDFIYSLYETTGSGG
Homology
BLAST of Lcy03g010900 vs. ExPASy TrEMBL
Match:
A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)
HSP 1 Score: 109.8 bits (273), Expect = 1.8e-20
Identity = 73/220 (33.18%), Postives = 112/220 (50.91%), Query Frame = 0
Query: 1 MRNLNREDLELSIHLLWGIWKNKNRVLHSTSLPNQTVNARNLNPIITDCLALKRSNLNAP 60
M E+ S+ + W IW+ +N+ + P ++ I + A + +NL
Sbjct: 1 MDKAGEEERRRSMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIINS-AGRNTNLKGK 60
Query: 61 S---EINLSRGKSQPSHEYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFSG 120
S +++L R + WKPP SWKLN +A+W A N GG+GW +RD G I +
Sbjct: 61 STNKDLHLIRRIEDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKAS 120
Query: 121 FSRINKNWSVKFLEMRAILDGLKVLPAIRASRSDLCIPPISVESDALSVINLLNGEDEDL 180
I ++ +LE+ AI +GL RA R + C PI +ESD+L I+LL+ + +D
Sbjct: 121 CRIIRAERNITYLEVMAICEGL------RAIRQEHC-RPIHLESDSLEAIHLLHRQCQDQ 180
Query: 181 TEASFLAEDIAEMRKVVEEISFEFCPRACNGDAHRMARIA 218
TE +L E+I +M K +E +S R N AH +AR A
Sbjct: 181 TEIIWLLEEIWQMMKDMEIVSMRHISREANKVAHGLARRA 212
BLAST of Lcy03g010900 vs. ExPASy TrEMBL
Match:
A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)
HSP 1 Score: 109.8 bits (273), Expect = 1.8e-20
Identity = 69/213 (32.39%), Postives = 113/213 (53.05%), Query Frame = 0
Query: 7 EDLELSIHLLWGIWKNKNRVLHSTSLPNQTVNARNLNPIITDCLALKRSNLNAPSEINLS 66
EDL++ + W IW ++N V+ + + + L +T+ + SE +LS
Sbjct: 8 EDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTES--------SYQSETSLS 67
Query: 67 R-GKSQPSHEYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFSGFSRINKNW 126
K+ + W+PPP+ W LN DASW+ S +RGG+GW +R G + +G +
Sbjct: 68 MLHKTLNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACN 127
Query: 127 SVKFLEMRAILDGLKVLPAIRASRSDLCIPPISVESDALSVINLLNGEDEDLTEASFLAE 186
+VK LE AIL+GL+ L + R P+ +E+D+ V +LLN + EDLT+ ++ E
Sbjct: 128 NVKLLEASAILEGLRNLTNLGVLR------PLHIETDSAEVESLLNRKREDLTKTGWVVE 187
Query: 187 DIAEMRKVVEEISFEFCPRACNGDAHRMARIAA 219
+I +R E ++F R NG AH +A+ A+
Sbjct: 188 EILNLRDSCEILAFAKVGRETNGCAHSLAQRAS 206
BLAST of Lcy03g010900 vs. ExPASy TrEMBL
Match:
A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)
HSP 1 Score: 108.6 bits (270), Expect = 4.0e-20
Identity = 75/228 (32.89%), Postives = 113/228 (49.56%), Query Frame = 0
Query: 1 MRNLNREDLELSIHLLWGIWKNKNRVL----HSTSLPNQTVNARNLNPIITDCLALKRSN 60
M E+ S+ + W IW+ +N+ + HS + Q V R + LK +
Sbjct: 1 MDKAGEEERRRSMIIAWQIWEMRNKSIFKGVHSETRDIQLVIDRYIINSAGRDTNLKGKS 60
Query: 61 LNAPSEINLSRGKSQPSHEYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFS 120
N +++L R + WKPP SWKLN DA+W A N GG+GW +RD G I +
Sbjct: 61 AN--KDLHLIRRIGDNTGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKA 120
Query: 121 GFSRINKNWSVKFLEMRAILDGLKVLPAIRASRSDLCIP-------PISVESDALSVINL 180
I ++ +LE+ AI +GL RA R + C P PI +ESD+L I+L
Sbjct: 121 DCRIIRTERNITYLEVMAICEGL------RAIRQEHCRPIQQEHCRPIHLESDSLEAIHL 180
Query: 181 LNGEDEDLTEASFLAEDIAEMRKVVEEISFEFCPRACNGDAHRMARIA 218
L+ + +D TE +L E+I +M + ++ +S R N AH +AR A
Sbjct: 181 LHRQCQDQTEIIWLLEEIWQMMEDMKIVSMRHISREANKVAHDLARRA 220
BLAST of Lcy03g010900 vs. ExPASy TrEMBL
Match:
B8AMK5 (RNase H domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_12637 PE=4 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 2.5e-14
Identity = 57/208 (27.40%), Postives = 100/208 (48.08%), Query Frame = 0
Query: 15 LLWGIWKNKNRVLHSTSLPNQTVNARNLNPIITDCLALKRSNLNAPS----EINLSRGKS 74
LLW W +N ++H + + L +++ ++ + N+ S
Sbjct: 333 LLWRAWFLRNDIIHGNGKAQTSASVMFLQHYAETLFMVRQKEVDLKGKGICQPNMHVRPS 392
Query: 75 QP-SHEYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFSGFSRINKNWSVKF 134
P S WKPPP G KLNVD +++A Q G +G +R+S G I S + + + +
Sbjct: 393 VPDSRTVWKPPPPGWVKLNVDGAFSAEQGIGAIGIIIRNSEGKAILSSWRFVRRCAEAEE 452
Query: 135 LEMRAILDGLKVLPAIRASRSDLCIPPISVESDALSVINLLNGEDEDLTEASFLAEDIAE 194
+E+ A +GLK+ ++ P+ +ESD +VI L + ED + +FL + +
Sbjct: 453 VELLACCEGLKL-------AAEWVPLPVELESDCTTVITRLKSKGEDRSRWAFLWRETKD 512
Query: 195 MRKVVEEISFEFCPRACNGDAHRMARIA 218
+ +V+E+ C R CN AH +A++A
Sbjct: 513 VMSLVKEVRLSHCKRECNRVAHELAQLA 533
BLAST of Lcy03g010900 vs. ExPASy TrEMBL
Match:
A0A803PZC5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 88.2 bits (217), Expect = 5.5e-14
Identity = 65/210 (30.95%), Postives = 104/210 (49.52%), Query Frame = 0
Query: 8 DLELSIHLLWGIWKNKNRVLHSTSLPNQTVNARNLNPIITDCLALKRSNLNAPSEINLSR 67
++E +LW IW +NRV+H T A N +++ + + + S
Sbjct: 686 EMESIFCILWCIWSERNRVVHGQQAKPATHLASFANNYMSNYRSAQLKYRPQLHHVPPSS 745
Query: 68 GKSQPSHEYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFSGFSRINKNWSV 127
+QP H W+PPP+G K+NVDA+ ++S+NR G+G +R+S+G I + I N++
Sbjct: 746 APTQPVHIPWQPPPIGELKMNVDAAVDSSKNRIGLGAVIRNSTGQVIAALSMPIIGNFAS 805
Query: 128 KFLEMRAILDGLKVLPAIRASRSDLCIPPISVESDALSVINLLNGEDEDLTEASFLAEDI 187
+E +AI L + AS+ +L I VE+DAL V N L G + + L DI
Sbjct: 806 HEMEAKAIFHSL-----VWASQWELQIG--HVETDALMVTNALYGRTNSIAAFNDLIIDI 865
Query: 188 AEMRKVVEEISFEFCPRACNGDAHRMARIA 218
+ + + +S R N AH +AR A
Sbjct: 866 SCLLSFLPGVSISHVKRTANMAAHTLARYA 888
BLAST of Lcy03g010900 vs. NCBI nr
Match:
XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])
HSP 1 Score: 109.8 bits (273), Expect = 3.7e-20
Identity = 69/213 (32.39%), Postives = 113/213 (53.05%), Query Frame = 0
Query: 7 EDLELSIHLLWGIWKNKNRVLHSTSLPNQTVNARNLNPIITDCLALKRSNLNAPSEINLS 66
EDL++ + W IW ++N V+ + + + L +T+ + SE +LS
Sbjct: 8 EDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTES--------SYQSETSLS 67
Query: 67 R-GKSQPSHEYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFSGFSRINKNW 126
K+ + W+PPP+ W LN DASW+ S +RGG+GW +R G + +G +
Sbjct: 68 MLHKTLNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACN 127
Query: 127 SVKFLEMRAILDGLKVLPAIRASRSDLCIPPISVESDALSVINLLNGEDEDLTEASFLAE 186
+VK LE AIL+GL+ L + R P+ +E+D+ V +LLN + EDLT+ ++ E
Sbjct: 128 NVKLLEASAILEGLRNLTNLGVLR------PLHIETDSAEVESLLNRKREDLTKTGWVVE 187
Query: 187 DIAEMRKVVEEISFEFCPRACNGDAHRMARIAA 219
+I +R E ++F R NG AH +A+ A+
Sbjct: 188 EILNLRDSCEILAFAKVGRETNGCAHSLAQRAS 206
BLAST of Lcy03g010900 vs. NCBI nr
Match:
XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])
HSP 1 Score: 109.8 bits (273), Expect = 3.7e-20
Identity = 73/220 (33.18%), Postives = 112/220 (50.91%), Query Frame = 0
Query: 1 MRNLNREDLELSIHLLWGIWKNKNRVLHSTSLPNQTVNARNLNPIITDCLALKRSNLNAP 60
M E+ S+ + W IW+ +N+ + P ++ I + A + +NL
Sbjct: 1 MDKAGEEERRRSMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIINS-AGRNTNLKGK 60
Query: 61 S---EINLSRGKSQPSHEYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFSG 120
S +++L R + WKPP SWKLN +A+W A N GG+GW +RD G I +
Sbjct: 61 STNKDLHLIRRIEDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKAS 120
Query: 121 FSRINKNWSVKFLEMRAILDGLKVLPAIRASRSDLCIPPISVESDALSVINLLNGEDEDL 180
I ++ +LE+ AI +GL RA R + C PI +ESD+L I+LL+ + +D
Sbjct: 121 CRIIRAERNITYLEVMAICEGL------RAIRQEHC-RPIHLESDSLEAIHLLHRQCQDQ 180
Query: 181 TEASFLAEDIAEMRKVVEEISFEFCPRACNGDAHRMARIA 218
TE +L E+I +M K +E +S R N AH +AR A
Sbjct: 181 TEIIWLLEEIWQMMKDMEIVSMRHISREANKVAHGLARRA 212
BLAST of Lcy03g010900 vs. NCBI nr
Match:
XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])
HSP 1 Score: 108.6 bits (270), Expect = 8.2e-20
Identity = 75/228 (32.89%), Postives = 113/228 (49.56%), Query Frame = 0
Query: 1 MRNLNREDLELSIHLLWGIWKNKNRVL----HSTSLPNQTVNARNLNPIITDCLALKRSN 60
M E+ S+ + W IW+ +N+ + HS + Q V R + LK +
Sbjct: 1 MDKAGEEERRRSMIIAWQIWEMRNKSIFKGVHSETRDIQLVIDRYIINSAGRDTNLKGKS 60
Query: 61 LNAPSEINLSRGKSQPSHEYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFS 120
N +++L R + WKPP SWKLN DA+W A N GG+GW +RD G I +
Sbjct: 61 AN--KDLHLIRRIGDNTGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKA 120
Query: 121 GFSRINKNWSVKFLEMRAILDGLKVLPAIRASRSDLCIP-------PISVESDALSVINL 180
I ++ +LE+ AI +GL RA R + C P PI +ESD+L I+L
Sbjct: 121 DCRIIRTERNITYLEVMAICEGL------RAIRQEHCRPIQQEHCRPIHLESDSLEAIHL 180
Query: 181 LNGEDEDLTEASFLAEDIAEMRKVVEEISFEFCPRACNGDAHRMARIA 218
L+ + +D TE +L E+I +M + ++ +S R N AH +AR A
Sbjct: 181 LHRQCQDQTEIIWLLEEIWQMMEDMKIVSMRHISREANKVAHDLARRA 220
BLAST of Lcy03g010900 vs. NCBI nr
Match:
XP_024042448.1 (uncharacterized protein LOC112099303 [Citrus clementina])
HSP 1 Score: 100.9 bits (250), Expect = 1.7e-17
Identity = 65/212 (30.66%), Postives = 106/212 (50.00%), Query Frame = 0
Query: 6 REDLELSIHLLWGIWKNKNRVLHSTSLPNQTVNARNLNPIITDCLALKRSNLNAPSEINL 65
++D+E I + W IW ++N + + + +A ++ + +R N P +
Sbjct: 29 KKDMEQIIAVCWVIWHSRNCFVFEGKMEDPLYSATRAEAVVE---SYRRIN---PGKNIA 88
Query: 66 SRGKSQPSHEYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFSGFSRINKNW 125
G+ Q + WKPPP G +K+NVDA+ N S+ RGG+G +RDS G + + R
Sbjct: 89 LAGQQQNGQQVWKPPPPGCFKVNVDAATNLSKQRGGIGAVVRDSRGDCVAAAAQRTTLKG 148
Query: 126 SVKFLEMRAILDGLKVLPAIRASRSDLCIPPISVESDALSVINLLNGEDEDLTEASFLAE 185
+V +E A+L G++V +R C P +ESD+ V+ L+ L E S+ E
Sbjct: 149 NVADMEAEAVLLGIQV------ARKANC-PHFVIESDSKEVVELVLKRKRSLVEISWNIE 208
Query: 186 DIAEMRKVVEEISFEFCPRACNGDAHRMARIA 218
+I E K S + PR CN AH +A++A
Sbjct: 209 EIQECLKGQNTASILYVPRRCNVRAHNLAKVA 227
BLAST of Lcy03g010900 vs. NCBI nr
Match:
XP_024033599.1 (uncharacterized protein LOC112095720 [Citrus clementina])
HSP 1 Score: 96.7 bits (239), Expect = 3.2e-16
Identity = 64/212 (30.19%), Postives = 105/212 (49.53%), Query Frame = 0
Query: 6 REDLELSIHLLWGIWKNKNRVLHSTSLPNQTVNARNLNPIITDCLALKRSNLNAPSEINL 65
++D+E I + W IW +N + + + +A ++ + +R N P +
Sbjct: 49 KKDMEQIIAVCWVIWHPRNCFVFEGKMEDPLYSATRAEAVVE---SYRRIN---PGKNIA 108
Query: 66 SRGKSQPSHEYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFSGFSRINKNW 125
G+ Q + WKPPP G +K+NVDA+ N S+ RGG+G +RDS G + + R
Sbjct: 109 LAGQQQNGQQVWKPPPPGCFKVNVDAATNLSKQRGGIGAVVRDSRGDYVAAAAQRTTLKG 168
Query: 126 SVKFLEMRAILDGLKVLPAIRASRSDLCIPPISVESDALSVINLLNGEDEDLTEASFLAE 185
+V +E A+L G++V +R C + +ESD+ V+ L+ L E S+ E
Sbjct: 169 NVADMEAEAVLLGIQV------ARKANCAHFV-IESDSKEVVELVLKRKRSLVEISWNIE 228
Query: 186 DIAEMRKVVEEISFEFCPRACNGDAHRMARIA 218
+I E K S + PR CN AH +A++A
Sbjct: 229 EIQECLKGQNTTSILYVPRRCNVRAHNLAKVA 247
BLAST of Lcy03g010900 vs. TAIR 10
Match:
AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 75.5 bits (184), Expect = 7.1e-14
Identity = 62/213 (29.11%), Postives = 96/213 (45.07%), Query Frame = 0
Query: 15 LLWGIWKNKNRVLHSTSLPNQTVNARNLNPIITDCLALKRSNLNAPSEINLSRGKSQPSH 74
LLW +WK++N ++ + R + + +R S + R S
Sbjct: 80 LLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEE-WSTRRELEGKASGPQVERNLS---- 139
Query: 75 EYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFSGFSRINKNWSVKFLEMRA 134
WK PP K N DA+W R G+GW +R+ SG ++ G + + +V E+ A
Sbjct: 140 VQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELEA 199
Query: 135 ILDGLKVLPAIRASRSDLCIPPISVESDALSVINLLNGEDEDLTEASFLAEDIAEMRKVV 194
+ + + R I ESDA +++NLLN +D T L EDI ++
Sbjct: 200 LRWAVLTMSRFNYKR-------IIFESDAQALVNLLNSDDFWPTLQPAL-EDIQQLLHHF 259
Query: 195 EEISFEFCPRACNGDAHRMARIA-AFGVFGPPL 227
EE+ FEF PR N A R+AR + +F + P L
Sbjct: 260 EEVKFEFTPRGGNKVADRIARESISFSNYDPKL 279
BLAST of Lcy03g010900 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 66.6 bits (161), Expect = 3.3e-11
Identity = 57/201 (28.36%), Postives = 87/201 (43.28%), Query Frame = 0
Query: 15 LLWGIWKNKNRVLHSTSLPNQTVNARNLNPIITDCLALKRSNLNAPSEINLSRGKSQPSH 74
LLW +WKN+N ++ + NA+ + D L R A S ++ S
Sbjct: 363 LLWRLWKNRNELV----FRGREFNAQEVLRRAEDDLEEWRIRTEAES-CGTKPQVNRSSC 422
Query: 75 EYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFSGFSRINKNWSVKFLEMRA 134
W+PPP K N DA+WN R G+GW +R+ G + G + K SV E+ A
Sbjct: 423 GRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEA 482
Query: 135 ILDGLKVLPAIRASRSDLCIPPISVESDALSVINLLNGEDEDLTEASFLAEDIAEMRKVV 194
+ + L + + + ESD+ +I +LN DE +D+ +
Sbjct: 483 MRWAVLSLSRFQYNY-------VIFESDSQVLIEILN-NDEIWPSLKPTIQDLQRLLSQF 542
Query: 195 EEISFEFCPRACNGDAHRMAR 216
E+ F F PR N A R+AR
Sbjct: 543 TEVKFVFIPREGNTLAERVAR 550
BLAST of Lcy03g010900 vs. TAIR 10
Match:
AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 46.2 bits (108), Expect = 4.6e-05
Identity = 53/204 (25.98%), Postives = 81/204 (39.71%), Query Frame = 0
Query: 15 LLWGIWKNKN-RVLHSTSLPNQTVNARNLNPIITDCLALKRSNLNAPSEINLSRGKSQPS 74
L+W IWK+ N V + T QT LN + L N + N +R
Sbjct: 47 LMWRIWKSGNDLVFNHTRTKFQTTVEMALND-TKEWL----DNTMTNEQQNGNRNADPSR 106
Query: 75 HEYWKPPPLGSWKLNVDASWNASQNRGGVGWSMRDSSGSPIFSGFSRINKNWSVKFLEMR 134
+ W PP K N DAS + G+GW +R+S G+ I G + + + E
Sbjct: 107 NTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECS 166
Query: 135 AILDGLKVLPAIRASRSDLCIPPISVESDALSVINLLNGEDEDLTEASFLAEDIAEMRKV 194
+ + AI+AS + E D ++ ++N + + FL + I
Sbjct: 167 TL------IWAIQASYG-FGHKKVIFEGDNQTITRMINTKSSNPRLQHFL-DTIQSWIPS 226
Query: 195 VEEISFEFCPRACNGDAHRMARIA 218
E I F F R NG A +A+ A
Sbjct: 227 FESIEFSFKHREQNGCADFLAKQA 237
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CP26 | 1.8e-20 | 33.18 | uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A6J1DNV9 | 1.8e-20 | 32.39 | uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6J1DSV1 | 4.0e-20 | 32.89 | uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
B8AMK5 | 2.5e-14 | 27.40 | RNase H domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_... | [more] |
A0A803PZC5 | 5.5e-14 | 30.95 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G34320.1 | 7.1e-14 | 29.11 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
AT4G29090.1 | 3.3e-11 | 28.36 | Ribonuclease H-like superfamily protein | [more] |
AT5G65005.1 | 4.6e-05 | 25.98 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |