Homology
BLAST of Lcy03g009310 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 378.3 bits (970), Expect = 1.8e-103
Identity = 202/523 (38.62%), Postives = 306/523 (58.51%), Query Frame = 0
Query: 145 ITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRHPSSHNHYTFTYALKACCLLHSTHNG 204
I P I+N++F S P + L L+ M+ N YTF + LK+C + G
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 205 LQIHARLVKSGHLSDIFIQNSLLHFYI----------VDDDVP----------------- 264
QIH ++K G D+++ SL+ Y+ V D P
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 265 ----SASRIFDSMPDPDVVSWTSIISGLAKLGFEEEALGKFLSM---NVRPNSATLVSAL 324
+A ++FD +P DVVSW ++ISG A+ G +EAL F M NVRP+ +T+V+ +
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 325 SACSSLGCLKLGKAIHGLRLRSLSEGS-VSLDNALLDFYVRCGSLRSAENLFDEMPKRDV 384
SAC+ G ++LG+ +H L + GS + + NAL+D Y +CG L +A LF+ +P +DV
Sbjct: 274 SACAQSGSIELGRQVH-LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 333
Query: 385 VSWTTMIGGYAQGGLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHS 444
+SW T+IGGY L ++A+ +FQ M+ GE PN+ T++++L AC+ + A+ +G+W+H
Sbjct: 334 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHV 393
Query: 445 YINSR-PDVTVDGSVGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLG 504
YI+ R VT S+ +LI+MY KCG +E A +F ++ HK + SW+ +I G AM+G
Sbjct: 394 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 453
Query: 505 SQAFVLFSLMLVHGISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYAC 564
+F LFS M GI PDDITF+GLLSACSH G+++ G +++ M Y + P++ HY C
Sbjct: 454 DASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGC 513
Query: 565 MVDMYGRAGLFDEAEAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVT 624
M+D+ G +GLF EAE I M +E +G +W +LL AC++HGN + E + L+ +
Sbjct: 514 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 573
Query: 625 VGTFALLSNTYASCDRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
G++ LLSN YAS RWN+ + R + +G+KKV GCS IEI
Sbjct: 574 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 614
BLAST of Lcy03g009310 vs. ExPASy Swiss-Prot
Match:
Q9SZK1 (Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E45 PE=3 SV=1)
HSP 1 Score: 349.7 bits (896), Expect = 6.7e-95
Identity = 183/480 (38.12%), Postives = 277/480 (57.71%), Query Frame = 0
Query: 153 FNSLFGAFVDSGAPENGLFLFNQMLRHPSSHNHYTFTYALKACCLLHSTHNGLQIHARLV 212
+N+L ++ P +F + + + S + +TF KAC G QIH +
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 213 KSGHLSDIFIQNSLLHFYIVDDDVPSASRIFDSMPDPDVVSWTSIISGLAKLGFEEEALG 272
K G DI++QNSL+HFY V + +A ++F MP DVVSWT II+G + G +EAL
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 273 KFLSMNVRPNSATLVSALSACSSLGCLKLGKAIHGLRLRSLSEGSVSLDNALLDFYVRCG 332
F M+V PN AT V L + +GCL LGK IHGL L+ S S+ NAL+D YV+C
Sbjct: 194 TFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCE 253
Query: 333 SLRSAENLFDEMPKRDVVSWTTMIGGYAQGGLCEKAVRIFQNMVHVGEVKPNEATLINVL 392
L A +F E+ K+D VSW +MI G ++A+ +F M +KP+ L +VL
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVL 313
Query: 393 SACSSMSALHLGQWVHSYINSRPDVTVDGSVGNALINMYVKCGSMEMAIMIFKTLEHKDI 452
SAC+S+ A+ G+WVH YI + + D +G A+++MY KCG +E A+ IF + K++
Sbjct: 314 SACASLGAVDHGRWVHEYILT-AGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV 373
Query: 453 ISWSTIISGLAMNGLGSQAFVLFSLMLVHGISPDDITFLGLLSACSHGGLINQGLMVYKA 512
+W+ ++ GLA++G G ++ F M+ G P+ +TFL L+AC H GL+++G +
Sbjct: 374 FTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHK 433
Query: 513 MKD-VYNVAPQMRHYACMVDMYGRAGLFDEAEAFIKEMPVEAEGPVWGALLHACQIHGNE 572
MK YN+ P++ HY CM+D+ RAGL DEA +K MPV+ + + GA+L AC+ G
Sbjct: 434 MKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTL 493
Query: 573 KKY-EEVRQWLLSSKGVTVGTFALLSNTYASCDRWNDANEVRDTMRSRGLKKVAGCSWIE 631
+ +E+ L + G + LLSN +A+ RW+D +R M+ +G+ KV G S+IE
Sbjct: 494 MELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
BLAST of Lcy03g009310 vs. ExPASy Swiss-Prot
Match:
Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 347.1 bits (889), Expect = 4.3e-94
Identity = 182/523 (34.80%), Postives = 291/523 (55.64%), Query Frame = 0
Query: 145 ITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRH---PSSHNHYTFTYALKACCLLHST 204
I NP +N F +S P+ L+ QMLRH S +H+T+ K C L +
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 205 HNGLQIHARLVKSGHLSDIFIQNSLLHFYIVDDDVPSASRIFDSMPDPDVVSWTSIISGL 264
G I ++K + N+ +H + D+ +A ++FD P D+VSW +I+G
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 265 AKLGFEEEALGKFLSM---NVRPNSATLVSALSACSSLGCLKLGKAIHGLRLRSLSEGSV 324
K+G E+A+ + M V+P+ T++ +S+CS LG L GK + + ++
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292
Query: 325 SLDNALLDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYAQGGLCEKAVRIFQNM--- 384
L NAL+D + +CG + A +FD + KR +VSWTTMI GYA+ GL + + ++F +M
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 385 ---------------------------VHVGEVKPNEATLINVLSACSSMSALHLGQWVH 444
+ KP+E T+I+ LSACS + AL +G W+H
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412
Query: 445 SYINSRPDVTVDGSVGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLG 504
YI + ++++ ++G +L++MY KCG++ A+ +F ++ ++ ++++ II GLA++G
Sbjct: 413 RYI-EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 472
Query: 505 SQAFVLFSLMLVHGISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYAC 564
S A F+ M+ GI+PD+ITF+GLLSAC HGG+I G + MK +N+ PQ++HY+
Sbjct: 473 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 532
Query: 565 MVDMYGRAGLFDEAEAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVT 624
MVD+ GRAGL +EA+ ++ MP+EA+ VWGALL C++HGN + E+ + LL
Sbjct: 533 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSD 592
Query: 625 VGTFALLSNTYASCDRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
G + LL Y + W DA R M RG++K+ GCS IE+
Sbjct: 593 SGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEV 634
BLAST of Lcy03g009310 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 342.8 bits (878), Expect = 8.2e-93
Identity = 186/519 (35.84%), Postives = 278/519 (53.56%), Query Frame = 0
Query: 153 FNSLFGAFVDSGAPENGLFLFNQMLRHPSSHNHYTFTYALKACCLLHSTHNGLQIHARLV 212
+NS+ F E L F M + N Y+F L AC L+ + G+Q+H+ +
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 213 KSGHLSDIFIQNSLLHFYIVDDDVPSASRIFDSMPDPDVVSWTSIISGLAKLGFEEEALG 272
KS LSD++I ++L+ Y +V A R+FD M D +VVSW S+I+ + G EAL
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 273 KF---LSMNVRPNSATLVSALSACSSLGCLKLGKAIHGLRLRS-LSEGSVSLDNALLDFY 332
F L V P+ TL S +SAC+SL +K+G+ +HG +++ + L NA +D Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 333 VRCGSLRSAENLFDEMP-------------------------------KRDVVSWTTMIG 392
+C ++ A +FD MP +R+VVSW +I
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 393 GYAQGGLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHSYINSRPDV 452
GY Q G E+A+ +F ++ V P + N+L AC+ ++ LHLG H ++
Sbjct: 360 GYTQNGENEEALSLF-CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 419
Query: 453 TVDGS-----VGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLGSQAF 512
G VGN+LI+MYVKCG +E ++F+ + +D +SW+ +I G A NG G++A
Sbjct: 420 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 479
Query: 513 VLFSLMLVHGISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYACMVDM 572
LF ML G PD IT +G+LSAC H G + +G + +M + VAP HY CMVD+
Sbjct: 480 ELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDL 539
Query: 573 YGRAGLFDEAEAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVTVGTF 632
GRAG +EA++ I+EMP++ + +WG+LL AC++H N + V + LL + G +
Sbjct: 540 LGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPY 599
BLAST of Lcy03g009310 vs. ExPASy Swiss-Prot
Match:
Q9SX45 (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)
HSP 1 Score: 338.6 bits (867), Expect = 1.5e-91
Identity = 181/487 (37.17%), Postives = 286/487 (58.73%), Query Frame = 0
Query: 152 IFNSLFGAFVDSGAPEN---GLFLFNQMLRHPSSHNHYTFTYALKACCLLHSTHNGLQIH 211
+++SL G F G N + M R+ + +TF LKA L + N Q H
Sbjct: 69 LWDSLIGHF-SGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDS-NPFQFH 128
Query: 212 ARLVKSGHLSDIFIQNSLLHFYIVDDDVPSASRIFDSMPDPDVVSWTSIISGLAKLGFEE 271
A +VK G SD F++NSL+ Y ASR+FD D DVV+WT++I G + G
Sbjct: 129 AHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSAS 188
Query: 272 EALGKFLSM---NVRPNSATLVSALSACSSLGCLKLGKAIHGLRLRS-LSEGSVSLDNAL 331
EA+ F+ M V N T+VS L A + ++ G+++HGL L + + V + ++L
Sbjct: 189 EAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSL 248
Query: 332 LDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYAQGGLCEKAVRIFQNMVHVGEVKPN 391
+D Y +C A+ +FDEMP R+VV+WT +I GY Q +K + +F+ M+ +V PN
Sbjct: 249 VDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLK-SDVAPN 308
Query: 392 EATLINVLSACSSMSALHLGQWVHSYINSRPDVTVDGSVGNALINMYVKCGSMEMAIMIF 451
E TL +VLSAC+ + ALH G+ VH Y+ + + ++ + G LI++YVKCG +E AI++F
Sbjct: 309 EKTLSSVLSACAHVGALHRGRRVHCYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 368
Query: 452 KTLEHKDIISWSTIISGLAMNGLGSQAFVLFSLMLVHGISPDDITFLGLLSACSHGGLIN 511
+ L K++ +W+ +I+G A +G AF LF ML +SP+++TF+ +LSAC+HGGL+
Sbjct: 369 ERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVE 428
Query: 512 QGLMVYKAMKDVYNVAPQMRHYACMVDMYGRAGLFDEAEAFIKEMPVEAEGPVWGALLHA 571
+G ++ +MK +N+ P+ HYACMVD++GR GL +EA+A I+ MP+E VWGAL +
Sbjct: 429 EGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGS 488
Query: 572 CQIHGNEKKYEEVRQWLLSSKGVTVGTFALLSNTYASCDRWNDANEVRDTMRSRGLKKVA 631
C +H + + + ++ + G + LL+N Y+ W++ VR M+ + + K
Sbjct: 489 CLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSP 548
BLAST of Lcy03g009310 vs. ExPASy TrEMBL
Match:
A0A6J1H7Z9 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461372 PE=4 SV=1)
HSP 1 Score: 898.7 bits (2321), Expect = 1.4e-257
Identity = 435/509 (85.46%), Postives = 473/509 (92.93%), Query Frame = 0
Query: 123 MPLKPPKPSISIAQLTQIHAQLITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRHPSS 182
MP +PPK IS AQL+QIHAQL+TNPKP +FN L GA VDS APENGLFL+NQMLRHPSS
Sbjct: 1 MPFRPPKLWISSAQLSQIHAQLLTNPKPRVFNPLLGALVDSVAPENGLFLYNQMLRHPSS 60
Query: 183 HNHYTFTYALKACCLLHSTHNGLQIHARLVKSGHLSDIFIQNSLLHFYIVDDDVPSASRI 242
HNHYTFTYALKAC LLH TH GL+IHARL+KSGHLSDIFIQNSLLHFYIVD DVPSASR+
Sbjct: 61 HNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRV 120
Query: 243 FDSMPDPDVVSWTSIISGLAKLGFEEEALGKFLSMNVRPNSATLVSALSACSSLGCLKLG 302
FDS+PDPDVVSWTSIISGL+KLGF+EEALGKFLSMNV PNSATLVSALSACSSL C+K+G
Sbjct: 121 FDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVKIG 180
Query: 303 KAIHGLRLRSLSEGSVSLDNALLDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYAQG 362
KAIHGL+LRSL+E SV+LDNALLDFYVRCGSLR A+NLFDEMP+RDVVSWTT+IGGYA
Sbjct: 181 KAIHGLKLRSLNEESVNLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALT 240
Query: 363 GLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHSYINSRPDVTVDGS 422
GLCE+AVR+FQNMVH E PNEATLINVLSACSSMSALHLGQWVHSYINSR DV +DG+
Sbjct: 241 GLCEEAVRVFQNMVHAREAIPNEATLINVLSACSSMSALHLGQWVHSYINSRHDVIIDGN 300
Query: 423 VGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLGSQAFVLFSLMLVHG 482
+GNALINMYVKCGSM+ AI IFKT+EHKDIISWSTIISGLAMNG G QAF LFSLMLVHG
Sbjct: 301 IGNALINMYVKCGSMDKAISIFKTVEHKDIISWSTIISGLAMNGQGKQAFGLFSLMLVHG 360
Query: 483 ISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYACMVDMYGRAGLFDEA 542
I+PD ITFL LLSACSHGGLINQGLMV++AMKDVYNVAP+MRHYACMVDMYG+AGL DEA
Sbjct: 361 ITPDAITFLSLLSACSHGGLINQGLMVFEAMKDVYNVAPEMRHYACMVDMYGKAGLLDEA 420
Query: 543 EAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVTVGTFALLSNTYASC 602
EAFIKEMPVEAEGPVWGALLHACQ+HGNE +YE+VRQWLLSSK +TVGT+ALLSNTYASC
Sbjct: 421 EAFIKEMPVEAEGPVWGALLHACQLHGNE-RYEKVRQWLLSSKSITVGTYALLSNTYASC 480
Query: 603 DRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
DRWNDANEVRD MRSRGLKK+AGCSWIE+
Sbjct: 481 DRWNDANEVRDAMRSRGLKKMAGCSWIEL 508
BLAST of Lcy03g009310 vs. ExPASy TrEMBL
Match:
A0A0A0LXJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613550 PE=4 SV=1)
HSP 1 Score: 896.3 bits (2315), Expect = 7.1e-257
Identity = 429/509 (84.28%), Postives = 474/509 (93.12%), Query Frame = 0
Query: 123 MPLKPPKPSISIAQLTQIHAQLITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRHPSS 182
MPLKP KPSISIAQ TQIHA+L+TNPKPHIFN L G+ V+S PENGLFL+NQMLR+PSS
Sbjct: 1 MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60
Query: 183 HNHYTFTYALKACCLLHSTHNGLQIHARLVKSGHLSDIFIQNSLLHFYIVDDDVPSASRI 242
HNH+TFTYALKACC LH T GL+IHA L+KSGHLSDIFIQNSLLHFYI+D DV SAS I
Sbjct: 61 HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120
Query: 243 FDSMPDPDVVSWTSIISGLAKLGFEEEALGKFLSMNVRPNSATLVSALSACSSLGCLKLG 302
FDS+PDPDVVSWTSIISGL+KLGFE+EAL KFLSMNVRPNS TLV+ALSACSSL CLKLG
Sbjct: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSACSSLRCLKLG 180
Query: 303 KAIHGLRLRSLSEGSVSLDNALLDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYAQG 362
KAIHGLR+R+L+E +V L+NALLDFYVRC LRSAENLF++MPKRDVVSWTTMIGGYAQ
Sbjct: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240
Query: 363 GLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHSYINSRPDVTVDGS 422
GLCE+AVR+FQNMVHVGE PNEATL+NVLSACSS+SALHLGQWVHSYINSR DV +DG+
Sbjct: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300
Query: 423 VGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLGSQAFVLFSLMLVHG 482
VGNALINMYVKCG+MEMAI+IFK +EHKDI+SWSTIISGLAMNGLG QAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360
Query: 483 ISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYACMVDMYGRAGLFDEA 542
+SPDDITFLGLLSACSHGGLINQG+MV++AMKDVYN++PQMRHYACMVDMYG+AGL DEA
Sbjct: 361 VSPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
Query: 543 EAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVTVGTFALLSNTYASC 602
EAFIKEMP+EAEGPVWGALLHACQ+HGNEKKYE+VR+WLL SKGVTVGTFALLSNTYA C
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480
Query: 603 DRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
DRWNDAN+VR MRSRGLKK+AG SWIE+
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEM 509
BLAST of Lcy03g009310 vs. ExPASy TrEMBL
Match:
A0A5D3D5L6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00410 PE=4 SV=1)
HSP 1 Score: 894.8 bits (2311), Expect = 2.1e-256
Identity = 430/511 (84.15%), Postives = 476/511 (93.15%), Query Frame = 0
Query: 121 NSMPLKPPKPSISIAQLTQIHAQLITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRHP 180
NSMPLKP KPSISIAQ TQIHA+L+TNPKPHIFN L G+ V+S +PENGLFL+NQML +P
Sbjct: 104 NSMPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYP 163
Query: 181 SSHNHYTFTYALKACCLLHSTHNGLQIHARLVKSGHLSDIFIQNSLLHFYIVDDDVPSAS 240
SSHNH+TFTYALKACC LH T GL+IHA L+KSGHLSDIFIQNSLLHFYI++ DV SAS
Sbjct: 164 SSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGDVSSAS 223
Query: 241 RIFDSMPDPDVVSWTSIISGLAKLGFEEEALGKFLSMNVRPNSATLVSALSACSSLGCLK 300
IFDS+P+PDVVSWTSIISGL+KLGFE+EALGKFLSMNVRPNS TLV+ALSACSSL CLK
Sbjct: 224 LIFDSIPNPDVVSWTSIISGLSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRCLK 283
Query: 301 LGKAIHGLRLRSLSEGSVSLDNALLDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYA 360
LGKAIHGLRLR+L+E +VSL+NALLDFYVRC LRSAENLF++M KRDVVSWTTMIGGYA
Sbjct: 284 LGKAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYA 343
Query: 361 QGGLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHSYINSRPDVTVD 420
Q GLCE+AVR+FQNMVHVGE PNEATL+NVLSACSS+SALHLGQWVHSYINSR DV +D
Sbjct: 344 QSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIID 403
Query: 421 GSVGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLGSQAFVLFSLMLV 480
G+VGNALINMYVKCG+MEMAI+IF +EHKDIISWST+ISGLAMNGLG QAFVLFSLMLV
Sbjct: 404 GNVGNALINMYVKCGNMEMAILIFNAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLV 463
Query: 481 HGISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYACMVDMYGRAGLFD 540
HGISPDDITFLGLLSACSHGGLINQG+MV++AMKDVYN++PQ+RHYACMVDMYG+AGL D
Sbjct: 464 HGISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLD 523
Query: 541 EAEAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVTVGTFALLSNTYA 600
EAEAFIKEMP+EAEGPVWGALLHACQIHGNEKKYE+VR+ LL SKGVTVG FALLSNTYA
Sbjct: 524 EAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYA 583
Query: 601 SCDRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
SCDRWNDAN+VR MRSRGLKK+AGCSWIE+
Sbjct: 584 SCDRWNDANDVRVAMRSRGLKKMAGCSWIEL 614
BLAST of Lcy03g009310 vs. ExPASy TrEMBL
Match:
A0A6J1JC26 (pentatricopeptide repeat-containing protein At4g38010-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485425 PE=4 SV=1)
HSP 1 Score: 891.7 bits (2303), Expect = 1.7e-255
Identity = 432/511 (84.54%), Postives = 472/511 (92.37%), Query Frame = 0
Query: 121 NSMPLKPPKPSISIAQLTQIHAQLITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRHP 180
NSMP KPPK IS AQL+QIHAQL+TNPKP++FN L GA +DS APENGLFL+NQMLRHP
Sbjct: 7 NSMPFKPPKLWISSAQLSQIHAQLLTNPKPNVFNPLLGALLDSVAPENGLFLYNQMLRHP 66
Query: 181 SSHNHYTFTYALKACCLLHSTHNGLQIHARLVKSGHLSDIFIQNSLLHFYIVDDDVPSAS 240
SSHNHYTFTYALKAC LLH TH GL+IHARL+KSGHLSDIFIQNSLLHFYIVD DV SAS
Sbjct: 67 SSHNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVSSAS 126
Query: 241 RIFDSMPDPDVVSWTSIISGLAKLGFEEEALGKFLSMNVRPNSATLVSALSACSSLGCLK 300
R+FDS+PDPDVVSWTSIISGL+KLGF+EEALGKFLSMNV PNSATLVSALSACS+L CLK
Sbjct: 127 RVFDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSTLRCLK 186
Query: 301 LGKAIHGLRLRSLSEGSVSLDNALLDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYA 360
+GKAIHGL+LRSL+E SV+LDNALLDFYVRCGSLR A+NLFDEMP+RDVVSWTT+IGGYA
Sbjct: 187 IGKAIHGLKLRSLNEESVNLDNALLDFYVRCGSLRGAQNLFDEMPRRDVVSWTTLIGGYA 246
Query: 361 QGGLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHSYINSRPDVTVD 420
GLCE+AVR+FQNMVH E PNEATLINVLSACSSMSALH GQWVHSY+NSR D+ +D
Sbjct: 247 LTGLCEEAVRVFQNMVHAREAIPNEATLINVLSACSSMSALHFGQWVHSYVNSRHDMIID 306
Query: 421 GSVGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLGSQAFVLFSLMLV 480
G++GNALINMYVKCGSME AI IFKT+EHKDIISWSTIISGLAMNG G QAF LFSLMLV
Sbjct: 307 GNIGNALINMYVKCGSMEKAISIFKTVEHKDIISWSTIISGLAMNGQGKQAFGLFSLMLV 366
Query: 481 HGISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYACMVDMYGRAGLFD 540
HGI+PD ITFL LLSACSHGGLINQGLMV++AMKDVYNVAP+MR YACMVDMYG+AGL D
Sbjct: 367 HGITPDAITFLSLLSACSHGGLINQGLMVFEAMKDVYNVAPEMRDYACMVDMYGKAGLLD 426
Query: 541 EAEAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVTVGTFALLSNTYA 600
EAEAFIKEMPVEAEGPVWGALLHACQ+HGNE +YE+VRQWLLSSK +TVGT+ALLSNTYA
Sbjct: 427 EAEAFIKEMPVEAEGPVWGALLHACQLHGNE-RYEKVRQWLLSSKSITVGTYALLSNTYA 486
Query: 601 SCDRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
SC RWNDANEVRD MRSRGLKK+AGCSWIE+
Sbjct: 487 SCHRWNDANEVRDAMRSRGLKKMAGCSWIEL 516
BLAST of Lcy03g009310 vs. ExPASy TrEMBL
Match:
A0A1S4DY27 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492035 PE=4 SV=1)
HSP 1 Score: 883.2 bits (2281), Expect = 6.2e-253
Identity = 425/509 (83.50%), Postives = 470/509 (92.34%), Query Frame = 0
Query: 123 MPLKPPKPSISIAQLTQIHAQLITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRHPSS 182
MPLKP KPSIS AQ TQIHA+L+TNPKPHIFN L G+ V+S +PENGLFL+NQML +PSS
Sbjct: 1 MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSS 60
Query: 183 HNHYTFTYALKACCLLHSTHNGLQIHARLVKSGHLSDIFIQNSLLHFYIVDDDVPSASRI 242
HNH+TFTYALKACC LH T GL+IHA L+KSGHLSDIFIQNSLLHFYI+ DV SAS I
Sbjct: 61 HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILHGDVSSASLI 120
Query: 243 FDSMPDPDVVSWTSIISGLAKLGFEEEALGKFLSMNVRPNSATLVSALSACSSLGCLKLG 302
FDS+P+PDVVSWTSIISG +KLGFE+EALGKFLSMNVRPNS TLV+ALSACSSL LKLG
Sbjct: 121 FDSIPNPDVVSWTSIISGFSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRRLKLG 180
Query: 303 KAIHGLRLRSLSEGSVSLDNALLDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYAQG 362
KAIHGLRLR+L+E +VSL+NALLDFYVRC LRSAENLF++M KRDVVSWTTMIGGYAQ
Sbjct: 181 KAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYAQS 240
Query: 363 GLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHSYINSRPDVTVDGS 422
GLCE+AVR+FQNMVH GE PNEATL+NVLSACSS+SALHLGQWVHSYINSR DV +DG+
Sbjct: 241 GLCEEAVRVFQNMVHAGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300
Query: 423 VGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLGSQAFVLFSLMLVHG 482
VGNALINMYVKCG+MEMAI+IFK +EHKDIISWST+ISGLAMNGLG QAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLVHG 360
Query: 483 ISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYACMVDMYGRAGLFDEA 542
ISPDDITFLGLLSACSHGGLINQG+MV++AMKDVYN++PQ+RHYACMVDMYG+AGL DEA
Sbjct: 361 ISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEA 420
Query: 543 EAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVTVGTFALLSNTYASC 602
EAFIKEMP+EAEGPVWGALLHACQIHGNEKKYE+VR+ LL SKGVTVG FALLSNTYASC
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASC 480
Query: 603 DRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
DRWNDAN+VR MRSRGLKK+AGCSWIE+
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGCSWIEL 509
BLAST of Lcy03g009310 vs. NCBI nr
Match:
XP_038878297.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 907.9 bits (2345), Expect = 4.9e-260
Identity = 436/509 (85.66%), Postives = 476/509 (93.52%), Query Frame = 0
Query: 123 MPLKPPKPSISIAQLTQIHAQLITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRHPSS 182
M LKPPKPSI IAQL QIH L+ NPKPHI N L G+ V+S +PENGLFL+NQMLR+PSS
Sbjct: 1 MLLKPPKPSILIAQLAQIHTNLLINPKPHILNPLLGSLVNSVSPENGLFLYNQMLRYPSS 60
Query: 183 HNHYTFTYALKACCLLHSTHNGLQIHARLVKSGHLSDIFIQNSLLHFYIVDDDVPSASRI 242
HNH+TFTYALKACC LH T GL+IHA L+KSGHLSDIF+QNSLLHFYI+D DVPSASRI
Sbjct: 61 HNHFTFTYALKACCFLHETQKGLEIHAHLIKSGHLSDIFLQNSLLHFYILDGDVPSASRI 120
Query: 243 FDSMPDPDVVSWTSIISGLAKLGFEEEALGKFLSMNVRPNSATLVSALSACSSLGCLKLG 302
FDS+PDPDV+SWTSIISGL+KLGFE+EALGKFLSMNVRPNS TLV+ALSACSSL CLKLG
Sbjct: 121 FDSIPDPDVISWTSIISGLSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRCLKLG 180
Query: 303 KAIHGLRLRSLSEGSVSLDNALLDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYAQG 362
KAIHGLRLRSL+E +VSLDNALLDFYVRCG LRSAE LFDEMPKRDVVSWTTMIGGYAQ
Sbjct: 181 KAIHGLRLRSLNEENVSLDNALLDFYVRCGYLRSAEYLFDEMPKRDVVSWTTMIGGYAQR 240
Query: 363 GLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHSYINSRPDVTVDGS 422
GLCE+AVR+FQNMVHVGE PNEATLINVLSACSS+SALHLGQWVHSYINSR DV +DG+
Sbjct: 241 GLCEEAVRVFQNMVHVGEAIPNEATLINVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300
Query: 423 VGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLGSQAFVLFSLMLVHG 482
VGNALINMYVKCG+MEMAI+IFK +EHKDIISWSTIISGLAMNGLG+QAF LFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTIISGLAMNGLGNQAFGLFSLMLVHG 360
Query: 483 ISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYACMVDMYGRAGLFDEA 542
ISPDDITFL LLSACSHGGLINQGLMV++AMKDVYN++PQMRHYACMVD+YG+AGL DEA
Sbjct: 361 ISPDDITFLSLLSACSHGGLINQGLMVFEAMKDVYNISPQMRHYACMVDLYGKAGLLDEA 420
Query: 543 EAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVTVGTFALLSNTYASC 602
EAFIKEMP+EAEG VWGALLHACQIHGNEKKYE+V++WLL SKGVTVGTFALLSNTYASC
Sbjct: 421 EAFIKEMPMEAEGSVWGALLHACQIHGNEKKYEKVKEWLLGSKGVTVGTFALLSNTYASC 480
Query: 603 DRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
DRWNDANEVRDTMRS+GLKK+AGCSWIE+
Sbjct: 481 DRWNDANEVRDTMRSKGLKKMAGCSWIEL 509
BLAST of Lcy03g009310 vs. NCBI nr
Match:
XP_023515586.1 (pentatricopeptide repeat-containing protein At4g38010-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 901.4 bits (2328), Expect = 4.6e-258
Identity = 436/509 (85.66%), Postives = 474/509 (93.12%), Query Frame = 0
Query: 123 MPLKPPKPSISIAQLTQIHAQLITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRHPSS 182
MPL+PPK SIS AQL+QIHAQL+TNPKPH+FN L GA VDS APENGLFL+NQMLRHPSS
Sbjct: 1 MPLRPPKLSISSAQLSQIHAQLLTNPKPHVFNPLLGALVDSVAPENGLFLYNQMLRHPSS 60
Query: 183 HNHYTFTYALKACCLLHSTHNGLQIHARLVKSGHLSDIFIQNSLLHFYIVDDDVPSASRI 242
HNHYTFTYALKAC LLH TH GL+IHARL+KSGHLSDIFIQNSLLHFYIVD DVPSASR+
Sbjct: 61 HNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRV 120
Query: 243 FDSMPDPDVVSWTSIISGLAKLGFEEEALGKFLSMNVRPNSATLVSALSACSSLGCLKLG 302
FDS+PDPDVVSWTSIISGL+KLGF+EEALGKFLSMNV PNSATLVSALSACSSL C+K+G
Sbjct: 121 FDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVKIG 180
Query: 303 KAIHGLRLRSLSEGSVSLDNALLDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYAQG 362
KAIHGL+LRSL+ SVSLDNALLDFYVRCGSLR A+NLFDEMP+RDVVSWTT+IGGYA
Sbjct: 181 KAIHGLKLRSLNVESVSLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALT 240
Query: 363 GLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHSYINSRPDVTVDGS 422
GLCE+AVR+FQNMVH E PNEATLINVLSACSSMSALHLG+WVHSYINSR DV +DG+
Sbjct: 241 GLCEEAVRVFQNMVHAREAIPNEATLINVLSACSSMSALHLGEWVHSYINSRHDVIIDGN 300
Query: 423 VGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLGSQAFVLFSLMLVHG 482
+GNALINMYVKCGSM+ AI IFKT+EHKD+ISWSTIISGLAMNG G QAF LFSLMLVHG
Sbjct: 301 IGNALINMYVKCGSMDKAISIFKTVEHKDVISWSTIISGLAMNGQGKQAFGLFSLMLVHG 360
Query: 483 ISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYACMVDMYGRAGLFDEA 542
I+PD ITFL LLSACSHGGLINQGLMV++AMKDVYNVAP+MRHYACMVDMYG+AGL DEA
Sbjct: 361 ITPDAITFLSLLSACSHGGLINQGLMVFEAMKDVYNVAPEMRHYACMVDMYGKAGLLDEA 420
Query: 543 EAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVTVGTFALLSNTYASC 602
EAFIKEMPVEAEGPVWGALLHACQ+HGNE YE+VRQWLLSSK +TVGT+ALLSNTYASC
Sbjct: 421 EAFIKEMPVEAEGPVWGALLHACQLHGNE-GYEKVRQWLLSSKSITVGTYALLSNTYASC 480
Query: 603 DRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
DRWNDANEVRD MRSRGLKK+AGCSWIE+
Sbjct: 481 DRWNDANEVRDAMRSRGLKKMAGCSWIEL 508
BLAST of Lcy03g009310 vs. NCBI nr
Match:
XP_022960642.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucurbita moschata] >KAG7023856.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 898.7 bits (2321), Expect = 2.9e-257
Identity = 435/509 (85.46%), Postives = 473/509 (92.93%), Query Frame = 0
Query: 123 MPLKPPKPSISIAQLTQIHAQLITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRHPSS 182
MP +PPK IS AQL+QIHAQL+TNPKP +FN L GA VDS APENGLFL+NQMLRHPSS
Sbjct: 1 MPFRPPKLWISSAQLSQIHAQLLTNPKPRVFNPLLGALVDSVAPENGLFLYNQMLRHPSS 60
Query: 183 HNHYTFTYALKACCLLHSTHNGLQIHARLVKSGHLSDIFIQNSLLHFYIVDDDVPSASRI 242
HNHYTFTYALKAC LLH TH GL+IHARL+KSGHLSDIFIQNSLLHFYIVD DVPSASR+
Sbjct: 61 HNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRV 120
Query: 243 FDSMPDPDVVSWTSIISGLAKLGFEEEALGKFLSMNVRPNSATLVSALSACSSLGCLKLG 302
FDS+PDPDVVSWTSIISGL+KLGF+EEALGKFLSMNV PNSATLVSALSACSSL C+K+G
Sbjct: 121 FDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVKIG 180
Query: 303 KAIHGLRLRSLSEGSVSLDNALLDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYAQG 362
KAIHGL+LRSL+E SV+LDNALLDFYVRCGSLR A+NLFDEMP+RDVVSWTT+IGGYA
Sbjct: 181 KAIHGLKLRSLNEESVNLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALT 240
Query: 363 GLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHSYINSRPDVTVDGS 422
GLCE+AVR+FQNMVH E PNEATLINVLSACSSMSALHLGQWVHSYINSR DV +DG+
Sbjct: 241 GLCEEAVRVFQNMVHAREAIPNEATLINVLSACSSMSALHLGQWVHSYINSRHDVIIDGN 300
Query: 423 VGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLGSQAFVLFSLMLVHG 482
+GNALINMYVKCGSM+ AI IFKT+EHKDIISWSTIISGLAMNG G QAF LFSLMLVHG
Sbjct: 301 IGNALINMYVKCGSMDKAISIFKTVEHKDIISWSTIISGLAMNGQGKQAFGLFSLMLVHG 360
Query: 483 ISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYACMVDMYGRAGLFDEA 542
I+PD ITFL LLSACSHGGLINQGLMV++AMKDVYNVAP+MRHYACMVDMYG+AGL DEA
Sbjct: 361 ITPDAITFLSLLSACSHGGLINQGLMVFEAMKDVYNVAPEMRHYACMVDMYGKAGLLDEA 420
Query: 543 EAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVTVGTFALLSNTYASC 602
EAFIKEMPVEAEGPVWGALLHACQ+HGNE +YE+VRQWLLSSK +TVGT+ALLSNTYASC
Sbjct: 421 EAFIKEMPVEAEGPVWGALLHACQLHGNE-RYEKVRQWLLSSKSITVGTYALLSNTYASC 480
Query: 603 DRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
DRWNDANEVRD MRSRGLKK+AGCSWIE+
Sbjct: 481 DRWNDANEVRDAMRSRGLKKMAGCSWIEL 508
BLAST of Lcy03g009310 vs. NCBI nr
Match:
KAG6590206.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 897.1 bits (2317), Expect = 8.6e-257
Identity = 434/509 (85.27%), Postives = 472/509 (92.73%), Query Frame = 0
Query: 123 MPLKPPKPSISIAQLTQIHAQLITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRHPSS 182
MP +PPK IS AQL+QIHAQL+TNPKP +FN L GA VDS APENGLFL+NQMLRHPSS
Sbjct: 1 MPFRPPKLWISSAQLSQIHAQLLTNPKPRVFNPLLGALVDSVAPENGLFLYNQMLRHPSS 60
Query: 183 HNHYTFTYALKACCLLHSTHNGLQIHARLVKSGHLSDIFIQNSLLHFYIVDDDVPSASRI 242
HNHYTFTYALKAC LLH TH GL+IHARL+KSGHLSDIFIQNSLLHFYIVD DVPSASR+
Sbjct: 61 HNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRV 120
Query: 243 FDSMPDPDVVSWTSIISGLAKLGFEEEALGKFLSMNVRPNSATLVSALSACSSLGCLKLG 302
FDS+PDPDVVSWTSIISGL+KLGF+EEALGKFLSMNV PNSATLVSALSACSSL C+K+G
Sbjct: 121 FDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVKIG 180
Query: 303 KAIHGLRLRSLSEGSVSLDNALLDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYAQG 362
KAIHGL+LRSL+E SV+LDNALLDFYVRCGSLR A+NLFDEMP+RDVVSWTT+IGGYA
Sbjct: 181 KAIHGLKLRSLNEESVNLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALT 240
Query: 363 GLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHSYINSRPDVTVDGS 422
GLCE+AVR+FQNMVH E PNEATLINVLSACSSMSALHLGQWVHSYINSR DV +DG+
Sbjct: 241 GLCEEAVRVFQNMVHAREAIPNEATLINVLSACSSMSALHLGQWVHSYINSRHDVIIDGN 300
Query: 423 VGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLGSQAFVLFSLMLVHG 482
+GNALINMYVKCGSM+ AI IFKT+EHKDIISWSTIISGLAMNG G QAF LFSLMLVHG
Sbjct: 301 IGNALINMYVKCGSMDKAISIFKTVEHKDIISWSTIISGLAMNGQGKQAFGLFSLMLVHG 360
Query: 483 ISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYACMVDMYGRAGLFDEA 542
I+PD ITFL LLSACSHGGLINQGLMV++AMKDVYNVAP+MRHYACMVDMYG+AGL DEA
Sbjct: 361 ITPDAITFLSLLSACSHGGLINQGLMVFEAMKDVYNVAPEMRHYACMVDMYGKAGLLDEA 420
Query: 543 EAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVTVGTFALLSNTYASC 602
EAFIKEMPVEAEGPVWGALLHACQ+HGNE +YE+VRQWLLSSK +TVGT+ALLSNTYASC
Sbjct: 421 EAFIKEMPVEAEGPVWGALLHACQLHGNE-RYEKVRQWLLSSKSITVGTYALLSNTYASC 480
Query: 603 DRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
DRWNDANEVRD MRSRGLKK+AGCSW E+
Sbjct: 481 DRWNDANEVRDAMRSRGLKKMAGCSWFEL 508
BLAST of Lcy03g009310 vs. NCBI nr
Match:
XP_011660133.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >XP_031745752.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >XP_031745757.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >XP_031745768.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >KGN66483.1 hypothetical protein Csa_006958 [Cucumis sativus])
HSP 1 Score: 896.3 bits (2315), Expect = 1.5e-256
Identity = 429/509 (84.28%), Postives = 474/509 (93.12%), Query Frame = 0
Query: 123 MPLKPPKPSISIAQLTQIHAQLITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRHPSS 182
MPLKP KPSISIAQ TQIHA+L+TNPKPHIFN L G+ V+S PENGLFL+NQMLR+PSS
Sbjct: 1 MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60
Query: 183 HNHYTFTYALKACCLLHSTHNGLQIHARLVKSGHLSDIFIQNSLLHFYIVDDDVPSASRI 242
HNH+TFTYALKACC LH T GL+IHA L+KSGHLSDIFIQNSLLHFYI+D DV SAS I
Sbjct: 61 HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120
Query: 243 FDSMPDPDVVSWTSIISGLAKLGFEEEALGKFLSMNVRPNSATLVSALSACSSLGCLKLG 302
FDS+PDPDVVSWTSIISGL+KLGFE+EAL KFLSMNVRPNS TLV+ALSACSSL CLKLG
Sbjct: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSACSSLRCLKLG 180
Query: 303 KAIHGLRLRSLSEGSVSLDNALLDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYAQG 362
KAIHGLR+R+L+E +V L+NALLDFYVRC LRSAENLF++MPKRDVVSWTTMIGGYAQ
Sbjct: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240
Query: 363 GLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHSYINSRPDVTVDGS 422
GLCE+AVR+FQNMVHVGE PNEATL+NVLSACSS+SALHLGQWVHSYINSR DV +DG+
Sbjct: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300
Query: 423 VGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLGSQAFVLFSLMLVHG 482
VGNALINMYVKCG+MEMAI+IFK +EHKDI+SWSTIISGLAMNGLG QAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360
Query: 483 ISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYACMVDMYGRAGLFDEA 542
+SPDDITFLGLLSACSHGGLINQG+MV++AMKDVYN++PQMRHYACMVDMYG+AGL DEA
Sbjct: 361 VSPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
Query: 543 EAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVTVGTFALLSNTYASC 602
EAFIKEMP+EAEGPVWGALLHACQ+HGNEKKYE+VR+WLL SKGVTVGTFALLSNTYA C
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480
Query: 603 DRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
DRWNDAN+VR MRSRGLKK+AG SWIE+
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEM 509
BLAST of Lcy03g009310 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 378.3 bits (970), Expect = 1.2e-104
Identity = 202/523 (38.62%), Postives = 306/523 (58.51%), Query Frame = 0
Query: 145 ITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRHPSSHNHYTFTYALKACCLLHSTHNG 204
I P I+N++F S P + L L+ M+ N YTF + LK+C + G
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 205 LQIHARLVKSGHLSDIFIQNSLLHFYI----------VDDDVP----------------- 264
QIH ++K G D+++ SL+ Y+ V D P
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 265 ----SASRIFDSMPDPDVVSWTSIISGLAKLGFEEEALGKFLSM---NVRPNSATLVSAL 324
+A ++FD +P DVVSW ++ISG A+ G +EAL F M NVRP+ +T+V+ +
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 325 SACSSLGCLKLGKAIHGLRLRSLSEGS-VSLDNALLDFYVRCGSLRSAENLFDEMPKRDV 384
SAC+ G ++LG+ +H L + GS + + NAL+D Y +CG L +A LF+ +P +DV
Sbjct: 274 SACAQSGSIELGRQVH-LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 333
Query: 385 VSWTTMIGGYAQGGLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHS 444
+SW T+IGGY L ++A+ +FQ M+ GE PN+ T++++L AC+ + A+ +G+W+H
Sbjct: 334 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHV 393
Query: 445 YINSR-PDVTVDGSVGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLG 504
YI+ R VT S+ +LI+MY KCG +E A +F ++ HK + SW+ +I G AM+G
Sbjct: 394 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 453
Query: 505 SQAFVLFSLMLVHGISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYAC 564
+F LFS M GI PDDITF+GLLSACSH G+++ G +++ M Y + P++ HY C
Sbjct: 454 DASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGC 513
Query: 565 MVDMYGRAGLFDEAEAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVT 624
M+D+ G +GLF EAE I M +E +G +W +LL AC++HGN + E + L+ +
Sbjct: 514 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 573
Query: 625 VGTFALLSNTYASCDRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
G++ LLSN YAS RWN+ + R + +G+KKV GCS IEI
Sbjct: 574 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 614
BLAST of Lcy03g009310 vs. TAIR 10
Match:
AT4G38010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 349.7 bits (896), Expect = 4.8e-96
Identity = 183/480 (38.12%), Postives = 277/480 (57.71%), Query Frame = 0
Query: 153 FNSLFGAFVDSGAPENGLFLFNQMLRHPSSHNHYTFTYALKACCLLHSTHNGLQIHARLV 212
+N+L ++ P +F + + + S + +TF KAC G QIH +
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 213 KSGHLSDIFIQNSLLHFYIVDDDVPSASRIFDSMPDPDVVSWTSIISGLAKLGFEEEALG 272
K G DI++QNSL+HFY V + +A ++F MP DVVSWT II+G + G +EAL
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 273 KFLSMNVRPNSATLVSALSACSSLGCLKLGKAIHGLRLRSLSEGSVSLDNALLDFYVRCG 332
F M+V PN AT V L + +GCL LGK IHGL L+ S S+ NAL+D YV+C
Sbjct: 194 TFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCE 253
Query: 333 SLRSAENLFDEMPKRDVVSWTTMIGGYAQGGLCEKAVRIFQNMVHVGEVKPNEATLINVL 392
L A +F E+ K+D VSW +MI G ++A+ +F M +KP+ L +VL
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVL 313
Query: 393 SACSSMSALHLGQWVHSYINSRPDVTVDGSVGNALINMYVKCGSMEMAIMIFKTLEHKDI 452
SAC+S+ A+ G+WVH YI + + D +G A+++MY KCG +E A+ IF + K++
Sbjct: 314 SACASLGAVDHGRWVHEYILT-AGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV 373
Query: 453 ISWSTIISGLAMNGLGSQAFVLFSLMLVHGISPDDITFLGLLSACSHGGLINQGLMVYKA 512
+W+ ++ GLA++G G ++ F M+ G P+ +TFL L+AC H GL+++G +
Sbjct: 374 FTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHK 433
Query: 513 MKD-VYNVAPQMRHYACMVDMYGRAGLFDEAEAFIKEMPVEAEGPVWGALLHACQIHGNE 572
MK YN+ P++ HY CM+D+ RAGL DEA +K MPV+ + + GA+L AC+ G
Sbjct: 434 MKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTL 493
Query: 573 KKY-EEVRQWLLSSKGVTVGTFALLSNTYASCDRWNDANEVRDTMRSRGLKKVAGCSWIE 631
+ +E+ L + G + LLSN +A+ RW+D +R M+ +G+ KV G S+IE
Sbjct: 494 MELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
BLAST of Lcy03g009310 vs. TAIR 10
Match:
AT2G22410.1 (SLOW GROWTH 1 )
HSP 1 Score: 347.1 bits (889), Expect = 3.1e-95
Identity = 182/523 (34.80%), Postives = 291/523 (55.64%), Query Frame = 0
Query: 145 ITNPKPHIFNSLFGAFVDSGAPENGLFLFNQMLRH---PSSHNHYTFTYALKACCLLHST 204
I NP +N F +S P+ L+ QMLRH S +H+T+ K C L +
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 205 HNGLQIHARLVKSGHLSDIFIQNSLLHFYIVDDDVPSASRIFDSMPDPDVVSWTSIISGL 264
G I ++K + N+ +H + D+ +A ++FD P D+VSW +I+G
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 265 AKLGFEEEALGKFLSM---NVRPNSATLVSALSACSSLGCLKLGKAIHGLRLRSLSEGSV 324
K+G E+A+ + M V+P+ T++ +S+CS LG L GK + + ++
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292
Query: 325 SLDNALLDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYAQGGLCEKAVRIFQNM--- 384
L NAL+D + +CG + A +FD + KR +VSWTTMI GYA+ GL + + ++F +M
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 385 ---------------------------VHVGEVKPNEATLINVLSACSSMSALHLGQWVH 444
+ KP+E T+I+ LSACS + AL +G W+H
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412
Query: 445 SYINSRPDVTVDGSVGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLG 504
YI + ++++ ++G +L++MY KCG++ A+ +F ++ ++ ++++ II GLA++G
Sbjct: 413 RYI-EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 472
Query: 505 SQAFVLFSLMLVHGISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYAC 564
S A F+ M+ GI+PD+ITF+GLLSAC HGG+I G + MK +N+ PQ++HY+
Sbjct: 473 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 532
Query: 565 MVDMYGRAGLFDEAEAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVT 624
MVD+ GRAGL +EA+ ++ MP+EA+ VWGALL C++HGN + E+ + LL
Sbjct: 533 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSD 592
Query: 625 VGTFALLSNTYASCDRWNDANEVRDTMRSRGLKKVAGCSWIEI 632
G + LL Y + W DA R M RG++K+ GCS IE+
Sbjct: 593 SGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEV 634
BLAST of Lcy03g009310 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 342.8 bits (878), Expect = 5.8e-94
Identity = 186/519 (35.84%), Postives = 278/519 (53.56%), Query Frame = 0
Query: 153 FNSLFGAFVDSGAPENGLFLFNQMLRHPSSHNHYTFTYALKACCLLHSTHNGLQIHARLV 212
+NS+ F E L F M + N Y+F L AC L+ + G+Q+H+ +
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 213 KSGHLSDIFIQNSLLHFYIVDDDVPSASRIFDSMPDPDVVSWTSIISGLAKLGFEEEALG 272
KS LSD++I ++L+ Y +V A R+FD M D +VVSW S+I+ + G EAL
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 273 KF---LSMNVRPNSATLVSALSACSSLGCLKLGKAIHGLRLRS-LSEGSVSLDNALLDFY 332
F L V P+ TL S +SAC+SL +K+G+ +HG +++ + L NA +D Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 333 VRCGSLRSAENLFDEMP-------------------------------KRDVVSWTTMIG 392
+C ++ A +FD MP +R+VVSW +I
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 393 GYAQGGLCEKAVRIFQNMVHVGEVKPNEATLINVLSACSSMSALHLGQWVHSYINSRPDV 452
GY Q G E+A+ +F ++ V P + N+L AC+ ++ LHLG H ++
Sbjct: 360 GYTQNGENEEALSLF-CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 419
Query: 453 TVDGS-----VGNALINMYVKCGSMEMAIMIFKTLEHKDIISWSTIISGLAMNGLGSQAF 512
G VGN+LI+MYVKCG +E ++F+ + +D +SW+ +I G A NG G++A
Sbjct: 420 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 479
Query: 513 VLFSLMLVHGISPDDITFLGLLSACSHGGLINQGLMVYKAMKDVYNVAPQMRHYACMVDM 572
LF ML G PD IT +G+LSAC H G + +G + +M + VAP HY CMVD+
Sbjct: 480 ELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDL 539
Query: 573 YGRAGLFDEAEAFIKEMPVEAEGPVWGALLHACQIHGNEKKYEEVRQWLLSSKGVTVGTF 632
GRAG +EA++ I+EMP++ + +WG+LL AC++H N + V + LL + G +
Sbjct: 540 LGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPY 599
BLAST of Lcy03g009310 vs. TAIR 10
Match:
AT1G50270.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 338.6 bits (867), Expect = 1.1e-92
Identity = 181/487 (37.17%), Postives = 286/487 (58.73%), Query Frame = 0
Query: 152 IFNSLFGAFVDSGAPEN---GLFLFNQMLRHPSSHNHYTFTYALKACCLLHSTHNGLQIH 211
+++SL G F G N + M R+ + +TF LKA L + N Q H
Sbjct: 69 LWDSLIGHF-SGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDS-NPFQFH 128
Query: 212 ARLVKSGHLSDIFIQNSLLHFYIVDDDVPSASRIFDSMPDPDVVSWTSIISGLAKLGFEE 271
A +VK G SD F++NSL+ Y ASR+FD D DVV+WT++I G + G
Sbjct: 129 AHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSAS 188
Query: 272 EALGKFLSM---NVRPNSATLVSALSACSSLGCLKLGKAIHGLRLRS-LSEGSVSLDNAL 331
EA+ F+ M V N T+VS L A + ++ G+++HGL L + + V + ++L
Sbjct: 189 EAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSL 248
Query: 332 LDFYVRCGSLRSAENLFDEMPKRDVVSWTTMIGGYAQGGLCEKAVRIFQNMVHVGEVKPN 391
+D Y +C A+ +FDEMP R+VV+WT +I GY Q +K + +F+ M+ +V PN
Sbjct: 249 VDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLK-SDVAPN 308
Query: 392 EATLINVLSACSSMSALHLGQWVHSYINSRPDVTVDGSVGNALINMYVKCGSMEMAIMIF 451
E TL +VLSAC+ + ALH G+ VH Y+ + + ++ + G LI++YVKCG +E AI++F
Sbjct: 309 EKTLSSVLSACAHVGALHRGRRVHCYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 368
Query: 452 KTLEHKDIISWSTIISGLAMNGLGSQAFVLFSLMLVHGISPDDITFLGLLSACSHGGLIN 511
+ L K++ +W+ +I+G A +G AF LF ML +SP+++TF+ +LSAC+HGGL+
Sbjct: 369 ERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVE 428
Query: 512 QGLMVYKAMKDVYNVAPQMRHYACMVDMYGRAGLFDEAEAFIKEMPVEAEGPVWGALLHA 571
+G ++ +MK +N+ P+ HYACMVD++GR GL +EA+A I+ MP+E VWGAL +
Sbjct: 429 EGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGS 488
Query: 572 CQIHGNEKKYEEVRQWLLSSKGVTVGTFALLSNTYASCDRWNDANEVRDTMRSRGLKKVA 631
C +H + + + ++ + G + LL+N Y+ W++ VR M+ + + K
Sbjct: 489 CLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSP 548
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LN01 | 1.8e-103 | 38.62 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9SZK1 | 6.7e-95 | 38.13 | Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX... | [more] |
Q9SJZ3 | 4.3e-94 | 34.80 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
Q9SIT7 | 8.2e-93 | 35.84 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
Q9SX45 | 1.5e-91 | 37.17 | Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1H7Z9 | 1.4e-257 | 85.46 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
A0A0A0LXJ1 | 7.1e-257 | 84.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613550 PE=4 SV=1 | [more] |
A0A5D3D5L6 | 2.1e-256 | 84.15 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1JC26 | 1.7e-255 | 84.54 | pentatricopeptide repeat-containing protein At4g38010-like isoform X1 OS=Cucurbi... | [more] |
A0A1S4DY27 | 6.2e-253 | 83.50 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
Match Name | E-value | Identity | Description | |
XP_038878297.1 | 4.9e-260 | 85.66 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benin... | [more] |
XP_023515586.1 | 4.6e-258 | 85.66 | pentatricopeptide repeat-containing protein At4g38010-like isoform X1 [Cucurbita... | [more] |
XP_022960642.1 | 2.9e-257 | 85.46 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
KAG6590206.1 | 8.6e-257 | 85.27 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_011660133.1 | 1.5e-256 | 84.28 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 ... | [more] |