Lcy03g009270 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g009270
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Cyclin-dependent protein kinase inhibitor SMR13
Location	Chr03: 42205698 .. 42206335 (-)
RNA-Seq Expression	Lcy03g009270
Synteny	Lcy03g009270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCATTAAACCCTCTCTCTCTCTCCTTCTCCCTTCTTCTTCCTTCTCCTTAAACCTGAAAACCTGCAACTCAACCCACCTCCAATGGCTTCTTCCCAACCAAAACTCTCAATCCCCTGAAATGGGTTTCTCCACAGCCTTCTGGGTGTGACAAATCTCACAAAAAGAAGCACTTTTGAGAGAAGCACTTCTGAAGGAAGCACAAGAAGAAATTGCATCCATGGCTTCTAAAGGAGGAAGAAGAAGAGGAAGAAAGCCAACAACAACCCAATTGAAGAAGAAGAAGAAGAAAATCAACATCAACAACAACAACAATCAAGCTAGAAGGATTATTGCCACTAAAATAAAAGAACAAGAAGAAGAAGAAGAAGAAATAATCAAAGCTTCAAGCTCCTCAGCCATGGCTGCTGCTGCTGCCACCATTGAAGAAGAATCAGCTTCAAGCTCTGATTTTGAAGAGTGTTGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAGATCAAAATTTGCCCTCCAGCTCCAAAAAAGCAAAGACTCATTTCAAATTGCTCCTTACAAAGAACTTCTCCAATTGCCTTCTTTGCTTCACCAGATATAGAGCTTTTCTTCTTCTTCTCACAACAATGACATTAGGGTT

mRNA sequence

CTCCATTAAACCCTCTCTCTCTCTCCTTCTCCCTTCTTCTTCCTTCTCCTTAAACCTGAAAACCTGCAACTCAACCCACCTCCAATGGCTTCTTCCCAACCAAAACTCTCAATCCCCTGAAATGGGTTTCTCCACAGCCTTCTGGGTGTGACAAATCTCACAAAAAGAAGCACTTTTGAGAGAAGCACTTCTGAAGGAAGCACAAGAAGAAATTGCATCCATGGCTTCTAAAGGAGGAAGAAGAAGAGGAAGAAAGCCAACAACAACCCAATTGAAGAAGAAGAAGAAGAAAATCAACATCAACAACAACAACAATCAAGCTAGAAGGATTATTGCCACTAAAATAAAAGAACAAGAAGAAGAAGAAGAAGAAATAATCAAAGCTTCAAGCTCCTCAGCCATGGCTGCTGCTGCTGCCACCATTGAAGAAGAATCAGCTTCAAGCTCTGATTTTGAAGAGTGTTGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAGATCAAAATTTGCCCTCCAGCTCCAAAAAAGCAAAGACTCATTTCAAATTGCTCCTTACAAAGAACTTCTCCAATTGCCTTCTTTGCTTCACCAGATATAGAGCTTTTCTTCTTCTTCTCACAACAATGACATTAGGGTT

Coding sequence (CDS)

ATGGCTTCTAAAGGAGGAAGAAGAAGAGGAAGAAAGCCAACAACAACCCAATTGAAGAAGAAGAAGAAGAAAATCAACATCAACAACAACAACAATCAAGCTAGAAGGATTATTGCCACTAAAATAAAAGAACAAGAAGAAGAAGAAGAAGAAATAATCAAAGCTTCAAGCTCCTCAGCCATGGCTGCTGCTGCTGCCACCATTGAAGAAGAATCAGCTTCAAGCTCTGATTTTGAAGAGTGTTGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAGATCAAAATTTGCCCTCCAGCTCCAAAAAAGCAAAGACTCATTTCAAATTGCTCCTTACAAAGAACTTCTCCAATTGCCTTCTTTGCTTCACCAGATATAGAGCTTTTCTTCTTCTTCTCACAACAATGA

Protein sequence

MASKGGRRRGRKPTTTQLKKKKKKININNNNNQARRIIATKIKEQEEEEEEIIKASSSSAMAAAAATIEEESASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRTSPIAFFASPDIELFFFFSQQ

Homology

[Close]

BLAST of Lcy03g009270 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.9e-11
Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 0


Query: 81  CCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRTSPIAFFASPDIELFF 131
           CCTPKA++ +IPE+  CPPAPKKQR+  NC L+R   I FFA P+IELFF
Sbjct: 54  CCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQ-IVFFAPPEIELFF 102

[Close]

BLAST of Lcy03g009270 vs. ExPASy Swiss-Prot
Match: Q3ECS5 (Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08
Identity = 45/125 (36.00%), Postives = 66/125 (52.80%), Query Frame = 0


Query: 9   RGRKPTTTQLKKKKKKININNNNNQARRIIATKIKEQEEEEEEIIKASSSSAMAAAAATI 68
           +G+KP      +++K+ +  N +                   ++   SS+S    + AT 
Sbjct: 4   KGKKPLRRTTTRRRKRSHFKNPSPPC------------SINSDVTSTSSTSTSPTSTATP 63

Query: 69  EEESASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRTSPIAFFASPDIEL 128
              SA S     CCTP  E+ +IPE+  CPPAPKKQ++  NC+L+R   IAFFA PD+EL
Sbjct: 64  SPVSAESG----CCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQ-IAFFAPPDVEL 109

Query: 129 FFFFS 134
           FF F+
Sbjct: 124 FFVFA 109

[Close]

BLAST of Lcy03g009270 vs. ExPASy TrEMBL
Match: A0A0A0M041 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613590 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 7.3e-26
Identity = 92/150 (61.33%), Postives = 96/150 (64.00%), Query Frame = 0


Query: 1   MASKGG--RRRGRKPTTTQLKKKKKKININNNNNQARRIIATKIKEQEEEEEEIIKASSS 60
           MASK G  RRR RK TTTQLK KK K NI NNN +              EEEEI K +SS
Sbjct: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKL-------------EEEEIEKGTSS 60

Query: 61  SAMAAAAATIEEESAS--SSDFEE-------CCTPKAERFKIPEIKICPPAPKKQRLI-- 120
           S         EE+S S  S DFEE       C TPKAERFKIPEIKICPPAPKK+RL   
Sbjct: 61  S----TTINFEEKSVSRRSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSN 120

Query: 121 --SNCSLQRTSPIAFFASPDIELFFFFSQQ 136
             SNCSLQR SPIAFFASPDIELFFFFS Q
Sbjct: 121 SNSNCSLQRPSPIAFFASPDIELFFFFSSQ 133

[Close]

BLAST of Lcy03g009270 vs. ExPASy TrEMBL
Match: A0A6J1DK32 (cyclin-dependent protein kinase inhibitor SMR9-like OS=Momordica charantia OX=3673 GN=LOC111021634 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.9e-22
Identity = 76/134 (56.72%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 1   MASKGGRRRGRKPTTTQLKKKKKKININNNNNQARRIIATKIKEQEEEEEEIIKASSSSA 60
           MASKGG  R +   + ++KKK  +     N        +   K QE E E  ++ +SSSA
Sbjct: 1   MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPP----SPPPKNQETETETAVELASSSA 60

Query: 61  MAAAAATIEEESASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCS-LQRTSPIA 120
             A      E  + SSD EECCTPKAERF+IPEIKICPPAPKKQR+ SNCS LQR SPIA
Sbjct: 61  AMA------ENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIA 120

Query: 121 FFASPDIELFFFFS 134
           FFASPDIELFFFFS
Sbjct: 121 FFASPDIELFFFFS 124

[Close]

BLAST of Lcy03g009270 vs. ExPASy TrEMBL
Match: A0A5B7C7L8 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_046560 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14
Identity = 57/128 (44.53%), Postives = 74/128 (57.81%), Query Frame = 0


Query: 6   GRRRGRKPTTTQLKKKKKKININNNNNQARRIIATKIKEQEEEEEEIIKASSSSAMAAAA 65
           GRRR RKP  TQLK ++  +++           +T      + + E++  SSS       
Sbjct: 5   GRRRRRKPRRTQLKNEETSVDLPCK--------STSKNSDHDMDSEVVDVSSSG------ 64

Query: 66  ATIEEESASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRTSPIAFFASPD 125
                          C TPKA+RF+IPEI  CPPAPKK+R++SNCSLQR +PIAFFA PD
Sbjct: 65  ---------------CSTPKAQRFRIPEILTCPPAPKKRRVVSNCSLQR-APIAFFAPPD 102

Query: 126 IELFFFFS 134
           IELFFFF+
Sbjct: 125 IELFFFFA 102

[Close]

BLAST of Lcy03g009270 vs. ExPASy TrEMBL
Match: A0A660KN86 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009775 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14
Identity = 60/133 (45.11%), Postives = 76/133 (57.14%), Query Frame = 0


Query: 1   MASKGGRRRGRKPTTTQLKKKKKKININNNNNQARRIIATKIKEQEEEEEEIIKASSSSA 60
           MA  G  R   +PT  Q ++   K  + ++      II+  +             SS+S+
Sbjct: 1   MAPSGRIRSSTRPTRRQPRRNPFKKRLPHSKTNQEAIISRNL------------PSSNSS 60

Query: 61  MAAAAATIEEESASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRTSPIAF 120
               +  IE  S        CCTPKA+RF+IPEI  CPPAPKKQRL+SNCSLQR SPIAF
Sbjct: 61  TTTISDDIEIPSTG------CCTPKAQRFRIPEISTCPPAPKKQRLVSNCSLQR-SPIAF 114

Query: 121 FASPDIELFFFFS 134
           FA PD+ELFFFF+
Sbjct: 121 FAPPDLELFFFFA 114

[Close]

BLAST of Lcy03g009270 vs. ExPASy TrEMBL
Match: A0A6A1UIU7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G007916 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.9e-14
Identity = 61/134 (45.52%), Postives = 80/134 (59.70%), Query Frame = 0


Query: 1   MASKGGRRRGRKPTTTQLKKKKKKININNNNNQARRIIATKIKEQEEEEEEIIKASSSSA 60
           MA  G  R  R+PT  + ++          N+  +R++A+K +E          A SS+ 
Sbjct: 1   MAPSG--RTRRRPTCRKPRR----------NHFKKRLVASKNQETSRSSPSKSSAKSSNE 60

Query: 61  MAA-AAATIEEESASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRTSPIA 120
           ++       E+  A  S    C TPKA+RF+IPEI  CPPAPKKQR+ISNCSLQR SPIA
Sbjct: 61  LSKNGEIDFEDVEAIPSSSSGCSTPKAQRFRIPEISTCPPAPKKQRVISNCSLQR-SPIA 120

Query: 121 FFASPDIELFFFFS 134
           FFA PD+ELFFFF+
Sbjct: 121 FFAPPDLELFFFFA 121

[Close]

BLAST of Lcy03g009270 vs. NCBI nr
Match: KAG7022087.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142.1 bits (357), Expect = 3.5e-30
Identity = 92/138 (66.67%), Postives = 102/138 (73.91%), Query Frame = 0


Query: 1   MASKGGR-RRGRKPTTTQLKKKKKKININNNNNQARR---IIATKIKEQEEEEEEIIKAS 60
           MASKGGR RRG  PT    K KKK  N  NN  + RR   I+++KI+E+ EE      AS
Sbjct: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIREEIEE----AAAS 60

Query: 61  SSSAMAAAAATIEEESASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRTS 120
           SSSAMAA      +E ASSSDFE C TPKA+RFKIPEI+ICPPAPKKQR ISNCSLQ+ S
Sbjct: 61  SSSAMAAI-----DEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHS 120

Query: 121 PIAFFASPDIELFFFFSQ 135
           PIAFFASPDIELFFFFSQ
Sbjct: 121 PIAFFASPDIELFFFFSQ 129

[Close]

BLAST of Lcy03g009270 vs. NCBI nr
Match: XP_023530358.1 (cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo] >KAG6588189.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141.7 bits (356), Expect = 4.5e-30
Identity = 92/139 (66.19%), Postives = 102/139 (73.38%), Query Frame = 0


Query: 1   MASKGGR-RRGRKPTTTQLKKKKKKININNNNNQARR----IIATKIKEQEEEEEEIIKA 60
           MASKGGR RRG  PT    K KKK  N  NN  + RR    I+++KI+E+ EE      A
Sbjct: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRRIIMSSKIREEIEE----AAA 60

Query: 61  SSSSAMAAAAATIEEESASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRT 120
           SSSSAMAA      +E ASSSDFE C TPKA+RFKIPEI+ICPPAPKKQR ISNCSLQ+ 
Sbjct: 61  SSSSAMAAI-----DEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKH 120

Query: 121 SPIAFFASPDIELFFFFSQ 135
           SPIAFFASPDIELFFFFSQ
Sbjct: 121 SPIAFFASPDIELFFFFSQ 130

[Close]

BLAST of Lcy03g009270 vs. NCBI nr
Match: KAG6590203.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023854.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138.7 bits (348), Expect = 3.8e-29
Identity = 86/137 (62.77%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 1   MASKGGRRR--GRKPTTTQLKKKKKKININNNNNQARRIIATKIKEQEEEEEEIIKASSS 60
           MASKGG RR  G+K   TQLKK +K   I    +Q++RI++TK  E+       I+ SSS
Sbjct: 1   MASKGGGRRNKGKKTAKTQLKKNQK---IKKMKDQSKRIVSTKRTEE-------IEVSSS 60

Query: 61  SAMAAAAATIEEESASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRTSPI 120
            AMAA AA +EE ++SSSDFEEC TPKAERF+IPEIKICPPAPKKQR+ SNCS Q+ SPI
Sbjct: 61  IAMAAMAA-MEESASSSSDFEECSTPKAERFRIPEIKICPPAPKKQRITSNCSSQKPSPI 120

Query: 121 AFFASPDIELFFFFSQQ 136
           +FFASPDIE+FFF S Q
Sbjct: 121 SFFASPDIEMFFFLSSQ 126

[Close]

BLAST of Lcy03g009270 vs. NCBI nr
Match: KGN66487.1 (hypothetical protein Csa_006949 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-25
Identity = 92/150 (61.33%), Postives = 96/150 (64.00%), Query Frame = 0


Query: 1   MASKGG--RRRGRKPTTTQLKKKKKKININNNNNQARRIIATKIKEQEEEEEEIIKASSS 60
           MASK G  RRR RK TTTQLK KK K NI NNN +              EEEEI K +SS
Sbjct: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKL-------------EEEEIEKGTSS 60

Query: 61  SAMAAAAATIEEESAS--SSDFEE-------CCTPKAERFKIPEIKICPPAPKKQRLI-- 120
           S         EE+S S  S DFEE       C TPKAERFKIPEIKICPPAPKK+RL   
Sbjct: 61  S----TTINFEEKSVSRRSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSN 120

Query: 121 --SNCSLQRTSPIAFFASPDIELFFFFSQQ 136
             SNCSLQR SPIAFFASPDIELFFFFS Q
Sbjct: 121 SNSNCSLQRPSPIAFFASPDIELFFFFSSQ 133

[Close]

BLAST of Lcy03g009270 vs. NCBI nr
Match: XP_022154348.1 (cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia])

HSP 1 Score: 114.8 bits (286), Expect = 5.9e-22
Identity = 76/134 (56.72%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 1   MASKGGRRRGRKPTTTQLKKKKKKININNNNNQARRIIATKIKEQEEEEEEIIKASSSSA 60
           MASKGG  R +   + ++KKK  +     N        +   K QE E E  ++ +SSSA
Sbjct: 1   MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPP----SPPPKNQETETETAVELASSSA 60

Query: 61  MAAAAATIEEESASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCS-LQRTSPIA 120
             A      E  + SSD EECCTPKAERF+IPEIKICPPAPKKQR+ SNCS LQR SPIA
Sbjct: 61  AMA------ENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIA 120

Query: 121 FFASPDIELFFFFS 134
           FFASPDIELFFFFS
Sbjct: 121 FFASPDIELFFFFS 124

[Close]

BLAST of Lcy03g009270 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.7 bits (169), Expect = 2.0e-12
Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 0


Query: 81  CCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRTSPIAFFASPDIELFF 131
           CCTPKA++ +IPE+  CPPAPKKQR+  NC L+R   I FFA P+IELFF
Sbjct: 54  CCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQ-IVFFAPPEIELFF 102

[Close]

BLAST of Lcy03g009270 vs. TAIR 10
Match: AT1G51355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 7.2e-10
Identity = 45/125 (36.00%), Postives = 66/125 (52.80%), Query Frame = 0


Query: 9   RGRKPTTTQLKKKKKKININNNNNQARRIIATKIKEQEEEEEEIIKASSSSAMAAAAATI 68
           +G+KP      +++K+ +  N +                   ++   SS+S    + AT 
Sbjct: 4   KGKKPLRRTTTRRRKRSHFKNPSPPC------------SINSDVTSTSSTSTSPTSTATP 63

Query: 69  EEESASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRTSPIAFFASPDIEL 128
              SA S     CCTP  E+ +IPE+  CPPAPKKQ++  NC+L+R   IAFFA PD+EL
Sbjct: 64  SPVSAESG----CCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQ-IAFFAPPDVEL 109

Query: 129 FFFFS 134
           FF F+
Sbjct: 124 FFVFA 109

[Close]

BLAST of Lcy03g009270 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.0e-04
Identity = 24/68 (35.29%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 67  TIEEESASSSDFEECC--TPKAERFKIPEIKICPPAPKKQRLISNCSLQRTSPIAFFASP 126
           ++   + S+++ E+ C  TP A+  +IP +  CPPAPKK++L    S     P  FF+ P
Sbjct: 39  SLSSSAVSNTEDEDLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY---GPREFFSPP 98

Query: 127 DIELFFFF 133
           D+E  F +
Sbjct: 99  DLETVFIY 103

The following BLAST results are available for this feature:

BLAST of Lcy03g009270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IWB3	2.9e-11	64.00	Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q3ECS5	1.0e-08	36.00	Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Lcy03g009270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M041	7.3e-26	61.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613590 PE=4 SV=1	[more]
A0A6J1DK32	2.9e-22	56.72	cyclin-dependent protein kinase inhibitor SMR9-like OS=Momordica charantia OX=36...	[more]
A0A5B7C7L8	2.9e-14	44.53	Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_046560 PE=4 SV=1	[more]
A0A660KN86	2.9e-14	45.11	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009775 PE=4 SV=1	[more]
A0A6A1UIU7	4.9e-14	45.52	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G007916 PE=4 SV=1	[more]

BLAST of Lcy03g009270 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022087.1	3.5e-30	66.67	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
XP_023530358.1	4.5e-30	66.19	cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo]...	[more]
KAG6590203.1	3.8e-29	62.77	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
KGN66487.1	1.5e-25	61.33	hypothetical protein Csa_006949 [Cucumis sativus]	[more]
XP_022154348.1	5.9e-22	56.72	cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia]	[more]

BLAST of Lcy03g009270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20898.1	2.0e-12	64.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G51355.1	7.2e-10	36.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G60783.1	2.0e-04	35.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 31..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR33142:SF28	SUBFAMILY NOT NAMED	coord: 18..134
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 18..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g009270.1	Lcy03g009270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045839	negative regulation of mitotic nuclear division
biological_process	GO:0032875	regulation of DNA endoreduplication
cellular_component	GO:0005634	nucleus