Lcy03g008440 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g008440
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Tubulin beta chain
Location	Chr03: 40541016 .. 40541816 (+)
RNA-Seq Expression	Lcy03g008440
Synteny	Lcy03g008440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATATAGAAGCGCCCATAAACATAGAGATCTCGCAAGGAATGAACATAAATTGTAAATTGTACTGTATCGTTTTAATTTGTTTTATTTTTGACTTCTTTGCTTTTGGAACAGTTGGAGATCTCAACCATTTAATTTCTGCTACAATGAGTGGGGTGACATGCTGTCTCAGATTTCCTGGCCAGCTTAACTCTGACCTCAGAAAACTTGCTGTGAATCTAATTCCCTTTCCTCGTCTACACTTCTTTATGGTGGGGTTTGCTCCTCTTACCTCACGTGGGTCACAGCTATATAGGGCGCTGACCGTCCCAGAGTTGACACAGCAAATGTGGGATTCTAAAAACATGATGTGTGCTGCAGATCCACGCCATGGCCGATACCTCACTGCCTCTGCGATGTTCAGGGGCAAGATGAGTACCAAAGAAGTTGATGAACAGATGATCAATGTTCAGAACAAGAATTCCTCATACTTCGTCGAATGGATTCCAAACAATGTTAAATCCAGCGTCTGTGACATTGCTCCTAAAGGACTTACCATGGCATCAACCTTCATTGGAAACTCAACCTCCATTCAGGAAATGTTCAGGCGTGTGAGCGAGCAGTTCACTGCCATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGAGAAGGAATGGACGAAATGGAGTTCACTGAGGCAGAAAGCAATATGAATGATCTGGTTTCTGAGTATCAGCAGTACCAGGACGCTACAGCTGATGAGGAGTATAATTACGAAGATGAAGAAGAAGAAGAAGAAGAGGACCTCGACAATTAG

mRNA sequence

ATGCATATAGAAGCGCCCATAAACATAGAGATCTCGCAAGGAATGAACATAAATTGTAAATTGTACTGTATCGTTTTAATTTGTTTTATTTTTGACTTCTTTGCTTTTGGAACAGTTGGAGATCTCAACCATTTAATTTCTGCTACAATGAGTGGGGTGACATGCTGTCTCAGATTTCCTGGCCAGCTTAACTCTGACCTCAGAAAACTTGCTGTGAATCTAATTCCCTTTCCTCGTCTACACTTCTTTATGGTGGGGTTTGCTCCTCTTACCTCACGTGGGTCACAGCTATATAGGGCGCTGACCGTCCCAGAGTTGACACAGCAAATGTGGGATTCTAAAAACATGATGTGTGCTGCAGATCCACGCCATGGCCGATACCTCACTGCCTCTGCGATGTTCAGGGGCAAGATGAGTACCAAAGAAGTTGATGAACAGATGATCAATGTTCAGAACAAGAATTCCTCATACTTCGTCGAATGGATTCCAAACAATGTTAAATCCAGCGTCTGTGACATTGCTCCTAAAGGACTTACCATGGCATCAACCTTCATTGGAAACTCAACCTCCATTCAGGAAATGTTCAGGCGTGTGAGCGAGCAGTTCACTGCCATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGAGAAGGAATGGACGAAATGGAGTTCACTGAGGCAGAAAGCAATATGAATGATCTGGTTTCTGAGTATCAGCAGTACCAGGACGCTACAGCTGATGAGGAGTATAATTACGAAGATGAAGAAGAAGAAGAAGAAGAGGACCTCGACAATTAG

Coding sequence (CDS)

ATGCATATAGAAGCGCCCATAAACATAGAGATCTCGCAAGGAATGAACATAAATTGTAAATTGTACTGTATCGTTTTAATTTGTTTTATTTTTGACTTCTTTGCTTTTGGAACAGTTGGAGATCTCAACCATTTAATTTCTGCTACAATGAGTGGGGTGACATGCTGTCTCAGATTTCCTGGCCAGCTTAACTCTGACCTCAGAAAACTTGCTGTGAATCTAATTCCCTTTCCTCGTCTACACTTCTTTATGGTGGGGTTTGCTCCTCTTACCTCACGTGGGTCACAGCTATATAGGGCGCTGACCGTCCCAGAGTTGACACAGCAAATGTGGGATTCTAAAAACATGATGTGTGCTGCAGATCCACGCCATGGCCGATACCTCACTGCCTCTGCGATGTTCAGGGGCAAGATGAGTACCAAAGAAGTTGATGAACAGATGATCAATGTTCAGAACAAGAATTCCTCATACTTCGTCGAATGGATTCCAAACAATGTTAAATCCAGCGTCTGTGACATTGCTCCTAAAGGACTTACCATGGCATCAACCTTCATTGGAAACTCAACCTCCATTCAGGAAATGTTCAGGCGTGTGAGCGAGCAGTTCACTGCCATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGAGAAGGAATGGACGAAATGGAGTTCACTGAGGCAGAAAGCAATATGAATGATCTGGTTTCTGAGTATCAGCAGTACCAGGACGCTACAGCTGATGAGGAGTATAATTACGAAGATGAAGAAGAAGAAGAAGAAGAGGACCTCGACAATTAG

Protein sequence

MHIEAPINIEISQGMNINCKLYCIVLICFIFDFFAFGTVGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGLTMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYNYEDEEEEEEEDLDN

Homology

[Close]

BLAST of Lcy03g008440 vs. ExPASy Swiss-Prot
Match: P29502 (Tubulin beta-3 chain (Fragment) OS=Pisum sativum OX=3888 GN=TUBB3 PE=2 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 9.6e-120
Identity = 226/264 (85.61%), Postives = 232/264 (87.88%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF        + GDLNHLISATMSGVTCCLR
Sbjct: 173 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 232

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMMC
Sbjct: 233 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMC 292

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAP+GL
Sbjct: 293 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGL 352

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
           +MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 353 SMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 412

Query: 246 YQQYQDATADEEYNYEDEEEEEEE 263
           YQQYQDATADEE  YEDEEEEE E
Sbjct: 413 YQQYQDATADEEGEYEDEEEEEPE 436

[Close]

BLAST of Lcy03g008440 vs. ExPASy Swiss-Prot
Match: P45960 (Tubulin beta-4 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB4 PE=2 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.1e-118
Identity = 222/266 (83.46%), Postives = 233/266 (87.59%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF        + GDLNHLISATMSGVTCCLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMMC
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+GL
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGL 361

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
           +MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 362 SMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421

Query: 246 YQQYQDATADEEYNYEDEEEEEEEDL 265
           YQQYQDATADEE  YEDEE++E +D+
Sbjct: 422 YQQYQDATADEEGEYEDEEQQEADDM 447

[Close]

BLAST of Lcy03g008440 vs. ExPASy Swiss-Prot
Match: P29514 (Tubulin beta-6 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.1e-118
Identity = 222/263 (84.41%), Postives = 232/263 (88.21%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF        + GDLNHLISATMSGVTCCLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMMC
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMC 301

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAP+GL
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGL 361

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
           +MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 362 SMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421

Query: 246 YQQYQDATADEEYNYEDEEEEEE 262
           YQQYQDATAD+E  YE++E+EEE
Sbjct: 422 YQQYQDATADDEGEYEEDEDEEE 444

[Close]

BLAST of Lcy03g008440 vs. ExPASy Swiss-Prot
Match: Q9ZPP0 (Tubulin beta-1 chain OS=Eleusine indica OX=29674 GN=TUBB1 PE=2 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 3.1e-118
Identity = 221/261 (84.67%), Postives = 228/261 (87.36%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF     A  T GDLNHLISATMSGVTCCLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLR 241

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMMC
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMC 301

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDI P GL
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGL 361

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
            MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+E
Sbjct: 362 KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAE 421

Query: 246 YQQYQDATADEEYNYEDEEEE 260
           YQQYQDATA++E  YEDEEEE
Sbjct: 422 YQQYQDATAEDEEEYEDEEEE 442

[Close]

BLAST of Lcy03g008440 vs. ExPASy Swiss-Prot
Match: Q43594 (Tubulin beta-1 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB1 PE=2 SV=2)

HSP 1 Score: 426.0 bits (1094), Expect = 3.1e-118
Identity = 223/265 (84.15%), Postives = 232/265 (87.55%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF        + GDLNHLISATMSGVTCCLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMMC
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+GL
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGL 361

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
           +MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 362 SMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421

Query: 246 YQQYQDATADEEYNYEDEEEEEEED 264
           YQQYQDATADEE +YEDEEE+  ED
Sbjct: 422 YQQYQDATADEEGDYEDEEEQVPED 446

[Close]

BLAST of Lcy03g008440 vs. ExPASy TrEMBL
Match: A0A7D5BN70 (Tubulin beta chain OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.5e-123
Identity = 236/268 (88.06%), Postives = 240/268 (89.55%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF        + GDLNHLISATMSGVTCCLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 301

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 361

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
           TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 362 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421

Query: 246 YQQYQDATADEEYNYEDEEEEEEEDLDN 267
           YQQYQDATADEEYNYEDEEEEEEEDLDN
Sbjct: 422 YQQYQDATADEEYNYEDEEEEEEEDLDN 449

[Close]

BLAST of Lcy03g008440 vs. ExPASy TrEMBL
Match: A0A6A5NTF0 (Tubulin beta chain OS=Lupinus albus OX=3870 GN=Lal_00046321 PE=3 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.6e-117
Identity = 216/224 (96.43%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 38  TVGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQL 97
           T+GDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ 
Sbjct: 234 TIGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQ 293

Query: 98  YRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 157
           YRALTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY
Sbjct: 294 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 353

Query: 158 FVEWIPNNVKSSVCDIAPKGLTMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 217
           FVEWIPNNVKSSVCDIAP+GL+MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG
Sbjct: 354 FVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 413

Query: 218 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYNYEDEEEEEE 262
           EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE  YEDEEEE E
Sbjct: 414 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEYEDEEEEPE 457

[Close]

BLAST of Lcy03g008440 vs. ExPASy TrEMBL
Match: A0A2K3PRI4 (Tubulin beta chain (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g014654 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 2.1e-117
Identity = 226/265 (85.28%), Postives = 233/265 (87.92%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF        + GDLNHLISATMSGVTCCLR
Sbjct: 187 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 246

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMMC
Sbjct: 247 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMC 306

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAP+GL
Sbjct: 307 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGL 366

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
           +MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 367 SMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 426

Query: 246 YQQYQDATADEEYNYEDEEEEEEED 264
           YQQYQDATADEE  YEDEEEE+E D
Sbjct: 427 YQQYQDATADEEGEYEDEEEEQEHD 451

[Close]

BLAST of Lcy03g008440 vs. ExPASy TrEMBL
Match: A0A5N5JJA4 (Tubulin beta chain OS=Salix brachista OX=2182728 GN=DKX38_023610 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 2.1e-117
Identity = 216/223 (96.86%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 38  TVGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQL 97
           TVGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ 
Sbjct: 232 TVGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQ 291

Query: 98  YRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 157
           YRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY
Sbjct: 292 YRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 351

Query: 158 FVEWIPNNVKSSVCDIAPKGLTMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 217
           FVEWIPNNVKSSVCDI P+GL MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG
Sbjct: 352 FVEWIPNNVKSSVCDIPPRGLAMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 411

Query: 218 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYNYEDEEEEE 261
           EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE  Y+DEEEEE
Sbjct: 412 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEYDDEEEEE 454

[Close]

BLAST of Lcy03g008440 vs. ExPASy TrEMBL
Match: A0A1R3HTQ2 (Tubulin beta chain (Fragment) OS=Corchorus olitorius OX=93759 GN=COLO4_26852 PE=3 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.7e-117
Identity = 223/261 (85.44%), Postives = 231/261 (88.51%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF     A  T GDLNHLISATMSGVTCCLR
Sbjct: 167 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLR 226

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMMC
Sbjct: 227 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 286

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI PKGL
Sbjct: 287 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGL 346

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
            MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+E
Sbjct: 347 KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAE 406

Query: 246 YQQYQDATADEEYNYEDEEEE 260
           YQQYQDATA+EEY+YEDE+EE
Sbjct: 407 YQQYQDATAEEEYDYEDEDEE 427

[Close]

BLAST of Lcy03g008440 vs. NCBI nr
Match: QKX94051.1 (tubulin beta-6 chain-like protein [Luffa aegyptiaca])

HSP 1 Score: 451.4 bits (1160), Expect = 5.2e-123
Identity = 236/268 (88.06%), Postives = 240/268 (89.55%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF        + GDLNHLISATMSGVTCCLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 301

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 361

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
           TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 362 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421

Query: 246 YQQYQDATADEEYNYEDEEEEEEEDLDN 267
           YQQYQDATADEEYNYEDEEEEEEEDLDN
Sbjct: 422 YQQYQDATADEEYNYEDEEEEEEEDLDN 449

[Close]

BLAST of Lcy03g008440 vs. NCBI nr
Match: KAF7842426.1 (tubulin beta chain [Senna tora])

HSP 1 Score: 432.2 bits (1110), Expect = 3.3e-117
Identity = 219/234 (93.59%), Postives = 225/234 (96.15%), Query Frame = 0


Query: 27  ICFIFDFFAFGTVGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 86
           I F+F  + F TVGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG
Sbjct: 233 ILFMFFLYCFVTVGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 292

Query: 87  FAPLTSRGSQLYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ 146
           FAPLTSRGSQ YRALTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ
Sbjct: 293 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ 352

Query: 147 MINVQNKNSSYFVEWIPNNVKSSVCDIAPKGLTMASTFIGNSTSIQEMFRRVSEQFTAMF 206
           MINVQNKNSSYFVEWIPNNVKSSVCDI PKGL MASTFIGNSTSIQEMFRRVSEQFTAMF
Sbjct: 353 MINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMF 412

Query: 207 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYNYEDEEEEE 261
           RRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATADEE +YE+EEEEE
Sbjct: 413 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEE-DYEEEEEEE 465

[Close]

BLAST of Lcy03g008440 vs. NCBI nr
Match: KAF1887083.1 (hypothetical protein Lal_00046321 [Lupinus albus])

HSP 1 Score: 432.2 bits (1110), Expect = 3.3e-117
Identity = 216/224 (96.43%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 38  TVGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQL 97
           T+GDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ 
Sbjct: 234 TIGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQ 293

Query: 98  YRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 157
           YRALTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY
Sbjct: 294 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 353

Query: 158 FVEWIPNNVKSSVCDIAPKGLTMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 217
           FVEWIPNNVKSSVCDIAP+GL+MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG
Sbjct: 354 FVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 413

Query: 218 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYNYEDEEEEEE 262
           EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE  YEDEEEE E
Sbjct: 414 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEYEDEEEEPE 457

[Close]

BLAST of Lcy03g008440 vs. NCBI nr
Match: KAB5519291.1 (hypothetical protein DKX38_023610 [Salix brachista])

HSP 1 Score: 431.8 bits (1109), Expect = 4.3e-117
Identity = 216/223 (96.86%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 38  TVGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQL 97
           TVGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ 
Sbjct: 232 TVGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQ 291

Query: 98  YRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 157
           YRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY
Sbjct: 292 YRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 351

Query: 158 FVEWIPNNVKSSVCDIAPKGLTMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 217
           FVEWIPNNVKSSVCDI P+GL MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG
Sbjct: 352 FVEWIPNNVKSSVCDIPPRGLAMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 411

Query: 218 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYNYEDEEEEE 261
           EGMDEMEFTEAESNMNDLVSEYQQYQDATADEE  Y+DEEEEE
Sbjct: 412 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEYDDEEEEE 454

[Close]

BLAST of Lcy03g008440 vs. NCBI nr
Match: PNY17898.1 (tubulin beta chain, partial [Trifolium pratense])

HSP 1 Score: 431.8 bits (1109), Expect = 4.3e-117
Identity = 226/265 (85.28%), Postives = 233/265 (87.92%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF        + GDLNHLISATMSGVTCCLR
Sbjct: 187 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 246

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMMC
Sbjct: 247 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMC 306

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAP+GL
Sbjct: 307 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGL 366

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
           +MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 367 SMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 426

Query: 246 YQQYQDATADEEYNYEDEEEEEEED 264
           YQQYQDATADEE  YEDEEEE+E D
Sbjct: 427 YQQYQDATADEEGEYEDEEEEQEHD 451

[Close]

BLAST of Lcy03g008440 vs. TAIR 10
Match: AT5G12250.1 (beta-6 tubulin )

HSP 1 Score: 427.6 bits (1098), Expect = 7.6e-120
Identity = 222/263 (84.41%), Postives = 232/263 (88.21%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF        + GDLNHLISATMSGVTCCLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMMC
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMC 301

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAP+GL
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGL 361

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
           +MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 362 SMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421

Query: 246 YQQYQDATADEEYNYEDEEEEEE 262
           YQQYQDATAD+E  YE++E+EEE
Sbjct: 422 YQQYQDATADDEGEYEEDEDEEE 444

[Close]

BLAST of Lcy03g008440 vs. TAIR 10
Match: AT5G62690.1 (tubulin beta chain 2 )

HSP 1 Score: 422.5 bits (1085), Expect = 2.4e-118
Identity = 220/262 (83.97%), Postives = 228/262 (87.02%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF        + GDLNHLISATMSGVTCCLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YR+LTVPELTQQMWDSKNMMC
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMC 301

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDI P GL
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGL 361

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
            MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 362 KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421

Query: 246 YQQYQDATADEEYNYEDEEEEE 261
           YQQYQDATADEE +YEDEEE E
Sbjct: 422 YQQYQDATADEEGDYEDEEEGE 443

[Close]

BLAST of Lcy03g008440 vs. TAIR 10
Match: AT5G62700.1 (tubulin beta chain 3 )

HSP 1 Score: 422.5 bits (1085), Expect = 2.4e-118
Identity = 220/262 (83.97%), Postives = 228/262 (87.02%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF        + GDLNHLISATMSGVTCCLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YR+LTVPELTQQMWDSKNMMC
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMC 301

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDI P GL
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGL 361

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
            MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 362 KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421

Query: 246 YQQYQDATADEEYNYEDEEEEE 261
           YQQYQDATADEE +YEDEEE E
Sbjct: 422 YQQYQDATADEEGDYEDEEEGE 443

[Close]

BLAST of Lcy03g008440 vs. TAIR 10
Match: AT5G23860.1 (tubulin beta 8 )

HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-117
Identity = 220/263 (83.65%), Postives = 227/263 (86.31%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF        + GDLNHLISATMSGVTCCLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMMC
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDI P GL
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGL 361

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
            MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 362 KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421

Query: 246 YQQYQDATADEEYNYEDEEEEEE 262
           YQQYQDATADEE  YE EE+E E
Sbjct: 422 YQQYQDATADEEEGYEYEEDEVE 444

[Close]

BLAST of Lcy03g008440 vs. TAIR 10
Match: AT5G23860.2 (tubulin beta 8 )

HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-117
Identity = 220/263 (83.65%), Postives = 227/263 (86.31%), Query Frame = 0


Query: 6   PINIEISQGMNINCKLYCIVL-------ICFIFDFFAFGTVGDLNHLISATMSGVTCCLR 65
           P N  +S    +     C+VL       ICF        + GDLNHLISATMSGVTCCLR
Sbjct: 182 PYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLR 241

Query: 66  FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMC 125
           FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMMC
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301

Query: 126 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGL 185
           AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDI P GL
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGL 361

Query: 186 TMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 245
            MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 362 KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421

Query: 246 YQQYQDATADEEYNYEDEEEEEE 262
           YQQYQDATADEE  YE EE+E E
Sbjct: 422 YQQYQDATADEEEGYEYEEDEVE 444

The following BLAST results are available for this feature:

BLAST of Lcy03g008440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29502	9.6e-120	85.61	Tubulin beta-3 chain (Fragment) OS=Pisum sativum OX=3888 GN=TUBB3 PE=2 SV=1	[more]
P45960	1.1e-118	83.46	Tubulin beta-4 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB4 PE=2 SV=1	[more]
P29514	1.1e-118	84.41	Tubulin beta-6 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB6 PE=2 SV=1	[more]
Q9ZPP0	3.1e-118	84.67	Tubulin beta-1 chain OS=Eleusine indica OX=29674 GN=TUBB1 PE=2 SV=1	[more]
Q43594	3.1e-118	84.15	Tubulin beta-1 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB1 PE=2 SV=2	[more]

BLAST of Lcy03g008440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D5BN70	2.5e-123	88.06	Tubulin beta chain OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
A0A6A5NTF0	1.6e-117	96.43	Tubulin beta chain OS=Lupinus albus OX=3870 GN=Lal_00046321 PE=3 SV=1	[more]
A0A2K3PRI4	2.1e-117	85.28	Tubulin beta chain (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g014654 PE=...	[more]
A0A5N5JJA4	2.1e-117	96.86	Tubulin beta chain OS=Salix brachista OX=2182728 GN=DKX38_023610 PE=3 SV=1	[more]
A0A1R3HTQ2	2.7e-117	85.44	Tubulin beta chain (Fragment) OS=Corchorus olitorius OX=93759 GN=COLO4_26852 PE=...	[more]

BLAST of Lcy03g008440 vs. NCBI nr


Match Name	E-value	Identity	Description
QKX94051.1	5.2e-123	88.06	tubulin beta-6 chain-like protein [Luffa aegyptiaca]	[more]
KAF7842426.1	3.3e-117	93.59	tubulin beta chain [Senna tora]	[more]
KAF1887083.1	3.3e-117	96.43	hypothetical protein Lal_00046321 [Lupinus albus]	[more]
KAB5519291.1	4.3e-117	96.86	hypothetical protein DKX38_023610 [Salix brachista]	[more]
PNY17898.1	4.3e-117	85.28	tubulin beta chain, partial [Trifolium pratense]	[more]

BLAST of Lcy03g008440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12250.1	7.6e-120	84.41	beta-6 tubulin	[more]
AT5G62690.1	2.4e-118	83.97	tubulin beta chain 2	[more]
AT5G62700.1	2.4e-118	83.97	tubulin beta chain 3	[more]
AT5G23860.1	2.1e-117	83.65	tubulin beta 8	[more]
AT5G23860.2	2.1e-117	83.65	tubulin beta 8	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 225..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..266
None	No IPR available	PANTHER	PTHR11588:SF106	TUBULIN BETA-6 CHAIN	coord: 26..260
None	No IPR available	CDD	cd02187	beta_tubulin	coord: 38..243 e-value: 9.48137E-156 score: 438.539
IPR004057	Epsilon tubulin	PRINTS	PR01519	EPSLNTUBULIN	coord: 196..215 score: 27.5 coord: 58..78 score: 54.76
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	SMART	SM00865	Tubulin_C_4	coord: 63..200 e-value: 3.4E-39 score: 146.2
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	PFAM	PF03953	Tubulin_C	coord: 78..199 e-value: 2.4E-38 score: 131.1
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	3.40.50.1440	Tubulin/FtsZ, GTPase domain	coord: 27..79 e-value: 4.9E-13 score: 51.1
IPR023123	Tubulin, C-terminal	GENE3D	1.10.287.600	Helix hairpin bin	coord: 191..247 e-value: 1.0E-35 score: 123.3
IPR037103	Tubulin/FtsZ-like, C-terminal domain	GENE3D	3.30.1330.20		coord: 80..190 e-value: 9.2E-40 score: 137.4
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 26..260
IPR008280	Tubulin/FtsZ, C-terminal	SUPERFAMILY	55307	Tubulin C-terminal domain-like	coord: 61..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g008440.1	Lcy03g008440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0009409	response to cold
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005200	structural constituent of cytoskeleton