Lcy03g004090 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g004090
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Myb_DNA-bind_3 domain-containing protein
Location	Chr03: 19156366 .. 19156695 (+)
RNA-Seq Expression	Lcy03g004090
Synteny	Lcy03g004090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCCAGTTGCATTGATGACGTTATTCAAATTGATGGATCAAAATATGATGGACCGTGGTCTTTCAAAAATGAAACAATTTTTATAGATTTGATGGATGAAGAAGTTGTGAAAGGAAATCGTCCAACTACAACCTTTACTAAAACAAGTTGGACTTACATGAAGGAACAACTATTTGCTAAGACAGGATATAGCTATACACATGATCAATTGAAAAACAAGTACAACAATCTTAGACAAGTTTATAAAGATTTCAAAAGTTTGTTGAATGATATTACTGGAAAAGGTTGGGATCCAGTGTACTTTGGAAGAAGAGCAGTGGAGTGA

mRNA sequence

ATGAAGGCCAGTTGCATTGATGACGTTATTCAAATTGATGGATCAAAATATGATGGACCGTGGTCTTTCAAAAATGAAACAATTTTTATAGATTTGATGGATGAAGAAGTTGTGAAAGGAAATCGTCCAACTACAACCTTTACTAAAACAAGTTGGACTTACATGAAGGAACAACTATTTGCTAAGACAGGATATAGCTATACACATGATCAATTGAAAAACAAGTACAACAATCTTAGACAAGTTTATAAAGATTTCAAAAGTTTGTTGAATGATATTACTGGAAAAGGTTGGGATCCAGTGTACTTTGGAAGAAGAGCAGTGGAGTGA

Coding sequence (CDS)

ATGAAGGCCAGTTGCATTGATGACGTTATTCAAATTGATGGATCAAAATATGATGGACCGTGGTCTTTCAAAAATGAAACAATTTTTATAGATTTGATGGATGAAGAAGTTGTGAAAGGAAATCGTCCAACTACAACCTTTACTAAAACAAGTTGGACTTACATGAAGGAACAACTATTTGCTAAGACAGGATATAGCTATACACATGATCAATTGAAAAACAAGTACAACAATCTTAGACAAGTTTATAAAGATTTCAAAAGTTTGTTGAATGATATTACTGGAAAAGGTTGGGATCCAGTGTACTTTGGAAGAAGAGCAGTGGAGTGA

Protein sequence

MKASCIDDVIQIDGSKYDGPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLFAKTGYSYTHDQLKNKYNNLRQVYKDFKSLLNDITGKGWDPVYFGRRAVE

Homology

[Close]

BLAST of Lcy03g004090 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 19  GPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLFAKTGYSYTHDQLKNKYNN 78
           G WS     +F+DL+ +E +KGNRP T F K  W  +   +   TG  YT  QLKN ++ 
Sbjct: 168 GYWSPSTHKLFLDLLVQETLKGNRPDTHFNKEGWKTILGTINENTGLGYTRPQLKNHWDC 227

Query: 79  LRQVYKDFKSLLNDITGKGWDP 101
            R+ +K +  L+   + K WDP
Sbjct: 228 TRKAWKIWCQLVGASSMK-WDP 248

[Close]

BLAST of Lcy03g004090 vs. ExPASy TrEMBL
Match: A0A1S4DUG7 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.7e-39
Identity = 76/101 (75.25%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 1   MKASCIDDVIQIDGSKYDGPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLF 60
           MK + I+DV QID S++DGPWSFKNETIFI+LM++EV KGNRPTTTFTKTSWTY+KEQL+
Sbjct: 1   MKINRIEDVHQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 60

Query: 61  AKTGYSYTHDQLKNKYNNLRQVYKDFKSLLNDITGKGWDPV 102
            KTGY+Y+H+QLKNKYN+LR  YK+FK LL+DI GKGWDPV
Sbjct: 61  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPV 101

[Close]

BLAST of Lcy03g004090 vs. ExPASy TrEMBL
Match: A0A1S3B8P1 (uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.7e-39
Identity = 76/101 (75.25%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 1   MKASCIDDVIQIDGSKYDGPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLF 60
           MK + I+DV QID S++DGPWSFKNETIFI+LM++EV KGNRPTTTFTKTSWTY+KEQL+
Sbjct: 27  MKINRIEDVHQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 86

Query: 61  AKTGYSYTHDQLKNKYNNLRQVYKDFKSLLNDITGKGWDPV 102
            KTGY+Y+H+QLKNKYN+LR  YK+FK LL+DI GKGWDPV
Sbjct: 87  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPV 127

[Close]

BLAST of Lcy03g004090 vs. ExPASy TrEMBL
Match: A0A1S3CFA7 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103500275 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.3e-29
Identity = 59/93 (63.44%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 10  IQIDGSKYDGPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLFAKTGYSYTH 69
           + IDG K +  WS K+E +F+DLMDEEV KGNRPTTTFTKTSW YM+ +L A TGY+Y+H
Sbjct: 3   VDIDGLKGERLWSNKSEALFVDLMDEEVAKGNRPTTTFTKTSWNYMRSELNANTGYNYSH 62

Query: 70  DQLKNKYNNLRQVYKDFKSLLNDITGKGWDPVY 103
           DQLKNK+N LR++ K FK +L+D+TG GWDP++
Sbjct: 63  DQLKNKFNKLRKICKAFKKILSDMTGNGWDPLF 95

[Close]

BLAST of Lcy03g004090 vs. ExPASy TrEMBL
Match: A0A7J6G543 (Myb_DNA-bind_3 domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_020722 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.4e-18
Identity = 54/94 (57.45%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 8   DVIQIDGSKYDGPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLFAKTGYSY 67
           +V+ ID S+    W  K+E IFI+LM+EEV+KGNR TTTFTK SW  +KE+L+A+   SY
Sbjct: 47  EVVIIDNSE-ASVWPEKHEEIFIELMEEEVLKGNRNTTTFTKQSWKRIKEELYAQAKRSY 106

Query: 68  THDQLKNKYNNLRQVYKDFKSLLNDITGKGWDPV 102
           T+ QL+NKYN LRQ +KDFKSLL + TG G+  V
Sbjct: 107 TNTQLRNKYNLLRQKHKDFKSLLKE-TGIGFSVV 138

[Close]

BLAST of Lcy03g004090 vs. ExPASy TrEMBL
Match: A0A7J6I1S9 (Myb_DNA-bind_3 domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_001721 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.9e-18
Identity = 56/98 (57.14%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 1   MKASCIDDVIQIDGSKYDGPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLF 60
           M A    +V+ ID S+    W  K+E IFI+LM+EEVVKGNR TTTFTK SW  +KE+L 
Sbjct: 35  MMAGTDSEVVIIDNSE-ASVWPEKHEEIFIELMEEEVVKGNRNTTTFTKQSWKRIKEELC 94

Query: 61  AKTGYSYTHDQLKNKYNNLRQVYKDFKSLLNDITGKGW 99
           A+   SYT  QL+NKYN LRQ +KDFKSLL + TG G+
Sbjct: 95  AQAKRSYTDKQLRNKYNLLRQKHKDFKSLLKE-TGIGF 130

[Close]

BLAST of Lcy03g004090 vs. NCBI nr
Match: XP_038904553.1 (L10-interacting MYB domain-containing protein-like isoform X2 [Benincasa hispida])

HSP 1 Score: 180.3 bits (456), Expect = 9.2e-42
Identity = 79/101 (78.22%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 1   MKASCIDDVIQIDGSKYDGPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLF 60
           MK +CI+DV QID SK+DGPWSFKNE+IFIDLM+EEV KGNRPTTTFTKTSWTY+KEQL+
Sbjct: 6   MKTNCIEDVTQIDASKFDGPWSFKNESIFIDLMEEEVAKGNRPTTTFTKTSWTYIKEQLY 65

Query: 61  AKTGYSYTHDQLKNKYNNLRQVYKDFKSLLNDITGKGWDPV 102
            +TGY+YTH+QLKNKYN+LR  YK+FK LL DI GKGWDPV
Sbjct: 66  VRTGYAYTHEQLKNKYNSLRHRYKEFKRLLGDINGKGWDPV 106

[Close]

BLAST of Lcy03g004090 vs. NCBI nr
Match: XP_038904554.1 (L10-interacting MYB domain-containing protein-like isoform X3 [Benincasa hispida])

HSP 1 Score: 180.3 bits (456), Expect = 9.2e-42
Identity = 79/101 (78.22%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 1   MKASCIDDVIQIDGSKYDGPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLF 60
           MK +CI+DV QID SK+DGPWSFKNE+IFIDLM+EEV KGNRPTTTFTKTSWTY+KEQL+
Sbjct: 1   MKTNCIEDVTQIDASKFDGPWSFKNESIFIDLMEEEVAKGNRPTTTFTKTSWTYIKEQLY 60

Query: 61  AKTGYSYTHDQLKNKYNNLRQVYKDFKSLLNDITGKGWDPV 102
            +TGY+YTH+QLKNKYN+LR  YK+FK LL DI GKGWDPV
Sbjct: 61  VRTGYAYTHEQLKNKYNSLRHRYKEFKRLLGDINGKGWDPV 101

[Close]

BLAST of Lcy03g004090 vs. NCBI nr
Match: XP_038904552.1 (L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida])

HSP 1 Score: 180.3 bits (456), Expect = 9.2e-42
Identity = 79/101 (78.22%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 1   MKASCIDDVIQIDGSKYDGPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLF 60
           MK +CI+DV QID SK+DGPWSFKNE+IFIDLM+EEV KGNRPTTTFTKTSWTY+KEQL+
Sbjct: 27  MKTNCIEDVTQIDASKFDGPWSFKNESIFIDLMEEEVAKGNRPTTTFTKTSWTYIKEQLY 86

Query: 61  AKTGYSYTHDQLKNKYNNLRQVYKDFKSLLNDITGKGWDPV 102
            +TGY+YTH+QLKNKYN+LR  YK+FK LL DI GKGWDPV
Sbjct: 87  VRTGYAYTHEQLKNKYNSLRHRYKEFKRLLGDINGKGWDPV 127

[Close]

BLAST of Lcy03g004090 vs. NCBI nr
Match: XP_008443406.1 (PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo])

HSP 1 Score: 171.0 bits (432), Expect = 5.6e-39
Identity = 76/101 (75.25%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 1   MKASCIDDVIQIDGSKYDGPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLF 60
           MK + I+DV QID S++DGPWSFKNETIFI+LM++EV KGNRPTTTFTKTSWTY+KEQL+
Sbjct: 27  MKINRIEDVHQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 86

Query: 61  AKTGYSYTHDQLKNKYNNLRQVYKDFKSLLNDITGKGWDPV 102
            KTGY+Y+H+QLKNKYN+LR  YK+FK LL+DI GKGWDPV
Sbjct: 87  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPV 127

[Close]

BLAST of Lcy03g004090 vs. NCBI nr
Match: KAE8651219.1 (hypothetical protein Csa_000986 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 5.6e-39
Identity = 76/101 (75.25%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 1   MKASCIDDVIQIDGSKYDGPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLF 60
           MK + I+DV QID S++DGPWSFKNETIFI+LM++EV KGNRPTTTFTKTSWTY+KEQL+
Sbjct: 27  MKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLY 86

Query: 61  AKTGYSYTHDQLKNKYNNLRQVYKDFKSLLNDITGKGWDPV 102
            KTGY+Y+H+QLKNKYN+LR  YK+FK LL+DI GKGWDPV
Sbjct: 87  VKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPV 127

[Close]

BLAST of Lcy03g004090 vs. TAIR 10
Match: AT5G05800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 7.6e-10
Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 19  GPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLFAKTGYSYTHDQLKNKYNN 78
           G WS     +F+DL+ +E +KGNRP T F K  W  +   +   TG  YT  QLKN ++ 
Sbjct: 168 GYWSPSTHKLFLDLLVQETLKGNRPDTHFNKEGWKTILGTINENTGLGYTRPQLKNHWDC 227

Query: 79  LRQVYKDFKSLLNDITGKGWDP 101
            R+ +K +  L+   + K WDP
Sbjct: 228 TRKAWKIWCQLVGASSMK-WDP 248

[Close]

BLAST of Lcy03g004090 vs. TAIR 10
Match: AT5G05800.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 7.6e-10
Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 19  GPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLFAKTGYSYTHDQLKNKYNN 78
           G WS     +F+DL+ +E +KGNRP T F K  W  +   +   TG  YT  QLKN ++ 
Sbjct: 168 GYWSPSTHKLFLDLLVQETLKGNRPDTHFNKEGWKTILGTINENTGLGYTRPQLKNHWDC 227

Query: 79  LRQVYKDFKSLLNDITGKGWDP 101
            R+ +K +  L+   + K WDP
Sbjct: 228 TRKAWKIWCQLVGASSMK-WDP 248

[Close]

BLAST of Lcy03g004090 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-09
Identity = 34/82 (41.46%), Postives = 43/82 (52.44%), Query Frame = 0


Query: 21  WSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLFAKTGYSYTHDQLKNKYNNLR 80
           W+   E  FIDLM E + +GNR   TF K +W  M     +K G  Y  D LK++Y NL 
Sbjct: 15  WTPTMERFFIDLMLEHLHRGNRTGHTFNKQAWNEMLTVFNSKFGSQYDKDVLKSRYTNLW 74

Query: 81  QVYKDFKSLLNDITGKGWDPVY 103
           + Y D K LL D  G  WD  +
Sbjct: 75  KQYNDVKCLL-DHGGFVWDQTH 95

[Close]

BLAST of Lcy03g004090 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-09
Identity = 34/82 (41.46%), Postives = 43/82 (52.44%), Query Frame = 0


Query: 21  WSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLFAKTGYSYTHDQLKNKYNNLR 80
           W+   E  FIDLM E + +GNR   TF K +W  M     +K G  Y  D LK++Y NL 
Sbjct: 15  WTPTMERFFIDLMLEHLHRGNRTGHTFNKQAWNEMLTVFNSKFGSQYDKDVLKSRYTNLW 74

Query: 81  QVYKDFKSLLNDITGKGWDPVY 103
           + Y D K LL D  G  WD  +
Sbjct: 75  KQYNDVKCLL-DHGGFVWDQTH 95

[Close]

BLAST of Lcy03g004090 vs. TAIR 10
Match: AT3G11290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 3.2e-08
Identity = 25/66 (37.88%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 19  GPWSFKNETIFIDLMDEEVVKGNRPTTTFTKTSWTYMKEQLFAKTGYSYTHDQLKNKYNN 78
           G WS  +  +F+DL+ +E +KGNRP + + K +W  + E +   TG S+T  QLKN ++ 
Sbjct: 166 GYWSPSSHELFVDLLFQEALKGNRPDSHYPKETWKMILETINQNTGKSFTRPQLKNHWDC 225

Query: 79  LRQVYK 85
            R+ +K
Sbjct: 226 TRKSWK 231

The following BLAST results are available for this feature:

BLAST of Lcy03g004090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFJ8	1.1e-08	37.80	L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Lcy03g004090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DUG7	2.7e-39	75.25	L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX...	[more]
A0A1S3B8P1	2.7e-39	75.25	uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CFA7	3.3e-29	63.44	L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A7J6G543	3.4e-18	57.45	Myb_DNA-bind_3 domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_020...	[more]
A0A7J6I1S9	5.9e-18	57.14	Myb_DNA-bind_3 domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_001...	[more]

BLAST of Lcy03g004090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904553.1	9.2e-42	78.22	L10-interacting MYB domain-containing protein-like isoform X2 [Benincasa hispida...	[more]
XP_038904554.1	9.2e-42	78.22	L10-interacting MYB domain-containing protein-like isoform X3 [Benincasa hispida...	[more]
XP_038904552.1	9.2e-42	78.22	L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida...	[more]
XP_008443406.1	5.6e-39	75.25	PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo]	[more]
KAE8651219.1	5.6e-39	75.25	hypothetical protein Csa_000986 [Cucumis sativus]	[more]

BLAST of Lcy03g004090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05800.1	7.6e-10	37.80	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G05800.2	7.6e-10	37.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G24960.1	2.2e-09	41.46	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.2	2.2e-09	41.46	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11290.1	3.2e-08	37.88	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 69..89
None	No IPR available	PANTHER	PTHR47584	FAMILY NOT NAMED	coord: 16..101
None	No IPR available	PANTHER	PTHR47584:SF14	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 16..101
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 21..100 e-value: 1.0E-17 score: 64.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g004090.1	Lcy03g004090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane