Lcy03g003560 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g003560
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionS-protein homolog
LocationChr03: 15080918 .. 15086389 (-)
RNA-Seq ExpressionLcy03g003560
SyntenyLcy03g003560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCATCATCAACCCTTGCACTCTCTCTCTTGCTAATGCTTTTCACCAACTTACATGCTGTTGAAGAAAGCTTACTTTTGCCAGAAACAACGGTGACCACTATTAATAAAATGGCTGGACCAGTGCTAAGCGTTCACTGCAAATCAAAGGATGATGACTTGGGAGCTCACATACTACAGCCAGATGGAAGCTACTCCTTTATTGAGGATAACAGGCCTTTGGACCTTATACAGGAGGATAATGAACGATTGGGTTATGAGAGTGCAGGCCATTCTATTCAGCCTACTAAGCCCATGACTAAAGGGACTAAAAGTTCTACATTCCAGAAGGTTCAGCTAACAAATTCGTCTATGAGCTGATTCTTCTGTTATTATTCTCTCCAATTATTTGTGTACATGTGTCCCTGTATTTTTCTATTGTTTATCGTTATTCTATATTGATTGGAAATTCCTGGATTTCCTCAACTGTATAAAATGTATCCTCCTGATGTAGTGTTGAATGCAACTGAGTACTATCTCACAAAATTCTCCAAATATTACAAATATTAACTTGGTATCAGAGCCCAAAAATGACCAGCGTCAACTCGATCGGGAATTCCGCCGTGGTCACCGCACCAACCAATTTCAGTAGTCCACCACTCAATCAACTCTTGAATCAGATAATGTCGATCAAGCTGGACAGAGGTAATTTCCTCTTATGGAAGAATTTAGCATTGTCTATTCTTCGTAGTTATAAGTTGGAAGGGCATTTGACTGGTGAGAAACCCTGCCTTTCTAAGTTCGTTCGAGGTCCAGCAGCCGGAGCAGACTCCTCTCCGTCAATCGGAGGAGGTGGTGAATCTAGTTCAGGAGCCGCCGTTAGAGGAACTTCTGAATCGCCTACTACCGATGAAATTAATCTGTTATATGAAGCGTGGATGGCCGTTGACCAGCTGCTGTTAGGCTGGTTGTATAATTCCATGACTTCTGAGGTGGCTACCCAAGTGATGGGCTTCGAAAAAGCCCAGGATCTGTGGACAGCAGTGCAAGACCTATTTGGAGTGCAATCGCGAGCCGAAGAAGATTATCTTCGACAAGTGTTTCAGCAATCGAGGAAAGGAAACATGAAAATGGCGGATTACTTGCGATTAATGAAGACCCACGCTGACAATCTGGGGCAAACCGGGAGTCCAGTGACAAATCGAGCACTGGTTTCACAAGTATTATTGGGGCTAGACGAGGAATTCAATCCTGTTGTGGCAATGATTCAAGGAAGAACAGGTATCACCTGGTCAGAGTTACAAGCCGAGTTGCTGGTTTTCGAAAAGAGGTTAGAACTACAGAACAGTCTCAAAACTTCGCTGACTATCTCTCATGGTGCATCTGTTAACATGGCTGCTAGTAAGGATGGAGGAAATCAACGTGTTCAAAATTCTCCAGGAAATAATAGACAAGGTAACTTTGGAAGAGGCAACCAACGTGGTAATGTTGGTTGTGGTAGAGGCAGAGCAAGAGGTTATGGATACTTTAACAACAACAATAAACCTATTTGTCAAGTCTGCAGTAAAATTGGGCATACAGCCCTCATTTGTTATTAGAGGTTCAATAAGGAGTTTCGAGGCTCTGTTCAAGCTCCAAACAGAGGTGACAATCAGAATTCAACTCAGCCGTCTGCTTTTGTTGCTAACCAGAATGGGAGTTCGTTTGTGGCTTCTCCTGAGACAGTGATTAACCCTAGCTGGTATGCTGATAGTGGAGCATCCAGCGATGTCACAGCAGACTACAACTTTGTGGCCAATCCTCTCGAGTATGAAGGTAACCAATGCGTAACTGTAGGTAATGGTGATAAGCTAAATATTCGATATACTGGTAATGCTTGCTTGACTGACAGAAACAAGAGGTTGAGTCTTGAACATGTATTATGTGTGCCCAGTATTGCTAAAAATTTGGTGAGTGTGTCTAAATTAGCCCAAGATAACGATATTTTTGTTGAATTTCATGATCGATTTTGTCTTGTTAAGGACAAGGCTACGGGCACGGTGCTGTTGAAAGGGGTACTCAGTGATGGTCTTTATCGATTCGATGGAGTACGAGTTGTTTCAGTGGACATTTCACGTTCAACAAATCAAAATGAGAAGCCTGCGGTTAATAATACTGATGTTTCTGTTTTTGCACTATCTAATTCAGTCAATACAGTGGTGTCCAAGAATGTTTTGCATAGAAGACTTGGTCACCCCTCTGTTAAAATCCTTGAGTCAATTGTCAAACGTTGTAATTTGTCGGTTAAAGTTAATGAAGAACTTAAGTTTTGTGAGGCCTGTCAGTTCGGCAAATCCCATGCTCTACCATTTTCTAACTCTGTCTCTCATGCCTCTCATAAATTTGATTTAATACACACAGATGTTTGGGGACCAGCACCTATTAACTCTGATCAAGGGTTTAGATACTATATCTTGTTTCTAGATGATTTCAGCAGGTTTACATGGATATACCCTCTGAAAAGCAAAAGTGATACCTGTATTGCGTTTAATCACTTTCTTGCATTAGTTAAAAAGCAGTTTAATAGCTCTGTTAAAGCTTTGCAGTCAGATAATGGAGGAGAATATCAACCAGTTCATCGTATTTGTCATCAGTTAGGCATCCAAATTCGGTTATCCTGTCCTTATACTTCACAGCAGAATGGCAGGGCTGAGAGAAAACATCGGCATGTGGTTGAGACTGGGTTGAGAATGCTTGCTCAAGCCTCAATGCCCCTTAGGTACTGGTGGGATTCATTTATACTCGCTGTCATTCTAATAAATAATCTCCCATCGCAGGTCTTGAAGAACAACTCACCCATGGAGCTCATGCATAACAAACAAGCAAACTTTGGAGACTTAAGGACATTTGGGTGTGCCTGTTACCCATGTTTACGCAAGTATCAGTCTCACAAGTTTGAGTTTCACACTGAGAAGTGTGTCTATCTCGGGCCAAGTCCTGTCCATAAGGGTCATAAATGTGTTAATGCCAAAGGCAGAGTGTTCATATCCCGTCATGTCATCTTCAATGAAGAAGATTTTCCGTTTGACAGTGGATTTCAGCAGCTTGTTCCGAATGTGTCAGCTACACAGTCAGCCCCAGATATAACAAAGTGGTTTGCTTGTCTTCCAGTCGCAAGCAGCTCCTCGGTCCCTTCTAATGCATCAAGTGTTGAACCAATTTTGCCTGCTCCTCTTGAGCCTCAAGATTCAAATTTGTCAGCACCCATATCTCCTCCACAATCCTTGCCGCCTGCACATATGCATTCAGGTTCTGTTTCAAATGATCAGTTGGCTTCACGAAGGTCACCAGCAAAGGCAGCATCTCCATCAACAGCGGTACCTACTACATCTGTTAATCAACAGTAGCCATTGCCTAGTACTGTTCTGCCTTCACATCTGATGATTACTCGAGGTAAGGCAGGGATCTTCAAGCCTAAAATTTTAGTGTCACAACACTCCACTGACTGGTCCAAGACTGAACCGACTAGAAGTAAAGAGGCCTTAGCCACACCTCAGTGGCGTGAGGCCATGGATGCTGAATACTCAGCCTTGATGCGAAATAAGACTTGGACACTTGTATCGGTCTCACCTTCGATGAATATCATAGGAAACAAGTGGATTTATAGAATTAAGAAAAATTCAGATGGATCTGTTCAACGATATAAAGCTCGTTTGGTTGCAAAAGGGTTTCACCAAAGCCCAGGAATTGATTTCCTTGAGAAGTTCAGTCCGGTAGTAAAGGCCTCTACGATTCGAGTGGTTCTGAGCCTTGCGGTCACTAAAGGCTGGCAGCTAAGGCAGTTGGACTTCAACAATGCTTTTCTCAACGGCAACCTTGATGAGGAGGTATATATAAGTCAGCCACCAGGTTATATTGATGAAAAGTTTCCAACTCATGTGTGCAACCTAAATAAGGCTATTTATGGTCTTAAACAAGCTCCAAGGGCATGGAACAATACGCTGAAGTCTGTGTTGCTTTCTTCGGGCTTTGTCAATTCAAGGTCAGATTCCTCTCTATTTATTTATCGTTCTAAGGCAGATGTCATACTACTTTTAGTCTATGTGGATGATGTGGTTGTGACTGGAAGCAATAAGAATCTGGTTAATCGATTGATTGTTTCATTGGATAGTCGTTTTGCCTTGAAGGACCTACGTTTATTACATTATTTTTTGGGCATTCAAGTCCATTATCTGCCAGATGAACTGCTATTGAATCAACGCAAATATGTTGATGATTTGCTGGTTAAGCTGGAGTTGAATACTCTAAAGCCAGCACCTTCACCAAGTGTTGTTGGCCAAAAATTGTCTATTAGTTCTGGTCTTCCTATGGAGAATCCGTCATTATACAGGAGTGTTATTGGAGCTTTACAGTATTTAACACATACTCGACCTGATGTAGCCTACGTAGTCAATCAACTTAGTCAGTATCACAAGGCTCCTACTGATCTTCATTGGCAAGCGGTGAAGTGTGTATTGCGTTATATTAGTGGGACTCGTGATTTTGGTTTATACATACAACGTGGTGATGATATCTCTGTTACCGCCTATTCTGATGCAGATTGGGCTTCAAACTTGGATGACCGAAAATCTGTGGCTGCATATTGTGTATTTATTGGTCCAAATATTGTATCATGGTCATCTAAGAAGCAGAGTGCAGTGGCAAGATCGAGTACAGAGTCTGAGTACCGAGCACTTGCATTGGCATCAGCTGAAATAGTATGGCTTCAGCAACTATTGAGTGAGATTGGTATTCCGTGTTTGTCTCGGCCTGTTCTTTGGTGTGACAGTGTAAGTGCTGGGGCCTTGGCAGCTAACCCCGTGTTTCACGCCCGAACTAAGCACATTGAGATTGATGTGCATTTTGTACGAGATATCGTCCTACAAGGAAAGCTTGAAGTTCGGTACATTCCTTCACCTGAACAACCAGTTGATTGTCTCACAAAGTCTTTGTCACACTCGCAGTTCACTTACTTGAGGTCCAAACTTGGAGTAGCAGAGCTACCCTCTCGTTTGAGGGGCAGTATTGAGGATAACAGGCCTTTGGGCCTTTTACAGGAGGATAATGAACGATTGGGTTATGAGAGTGCAGGCCATTCTGTTCAGCCTACTAAGCCCATGACTAAAGGGACTAAAAGTTCTACATTCCAGAAGGTTCAGCTAACAAATTCGTCTATGAGCTGATTCTTCTGTTATTGATCTCTCCAATTACTTGTGTACATGTGTCCCTGTATTTTTCTATTGTTTATCGTTATTCTTTATTGATTGGAAATTCCTGGATTTCCTCAACTGTATAAAATGTATCCTCCTGATTTAGTGTTGAATGCAACTGAGTACTATCTCACAAAATTCTCCAAATATTACAAATATTAACTTCCTTTACCTTTAGACCAAATGTTTTTGGTACGACGCTATTTACCTGCATCTTTCAATGGACCGAGACTCACAACTTCGCTATCTTCGACTTTCATAG

mRNA sequence

ATGGATTCATCATCAACCCTTGCACTCTCTCTCTTGCTAATGCTTTTCACCAACTTACATGCTGTTGAAGAAAGCTTACTTTTGCCAGAAACAACGGTGACCACTATTAATAAAATGGCTGGACCAGTGCTAAGCGTTCACTGCAAATCAAAGGATGATGACTTGGGAGCTCACATACTACAGCCAGATGGAAGCTACTCCTTTATTGAGGATAACAGGCCTTTGGACCTTATACAGGAGGATAATGAACGATTGGGTTATGAGAGTGCAGGCCATTCTATTCAGCCTACTAAGCCCATGACTAAAGGGACTAAAAGTTCTACATTCCAGAAGGAGGATAATGAACGATTGGGTTATGAGAGTGCAGGCCATTCTGTTCAGCCTACTAAGCCCATGACTAAAGGGACTAAAAGTTCTACATTCCAGAAGACCAAATGTTTTTGGTACGACGCTATTTACCTGCATCTTTCAATGGACCGAGACTCACAACTTCGCTATCTTCGACTTTCATAG

Coding sequence (CDS)

ATGGATTCATCATCAACCCTTGCACTCTCTCTCTTGCTAATGCTTTTCACCAACTTACATGCTGTTGAAGAAAGCTTACTTTTGCCAGAAACAACGGTGACCACTATTAATAAAATGGCTGGACCAGTGCTAAGCGTTCACTGCAAATCAAAGGATGATGACTTGGGAGCTCACATACTACAGCCAGATGGAAGCTACTCCTTTATTGAGGATAACAGGCCTTTGGACCTTATACAGGAGGATAATGAACGATTGGGTTATGAGAGTGCAGGCCATTCTATTCAGCCTACTAAGCCCATGACTAAAGGGACTAAAAGTTCTACATTCCAGAAGGAGGATAATGAACGATTGGGTTATGAGAGTGCAGGCCATTCTGTTCAGCCTACTAAGCCCATGACTAAAGGGACTAAAAGTTCTACATTCCAGAAGACCAAATGTTTTTGGTACGACGCTATTTACCTGCATCTTTCAATGGACCGAGACTCACAACTTCGCTATCTTCGACTTTCATAG

Protein sequence

MDSSSTLALSLLLMLFTNLHAVEESLLLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSFIEDNRPLDLIQEDNERLGYESAGHSIQPTKPMTKGTKSSTFQKEDNERLGYESAGHSVQPTKPMTKGTKSSTFQKTKCFWYDAIYLHLSMDRDSQLRYLRLS
Homology
[Close]
BLAST of Lcy03g003560 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.3e-04
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0 

Query: 30 ETTVTTINKMA-GPVLSVHCKSKDDDLGAHILQPDGSYSF 69
          ++ VT  N++  G  L +HCKS DDDLG  IL P+GS+SF
Sbjct: 37 KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSF 76

[Close]
BLAST of Lcy03g003560 vs. ExPASy TrEMBL
Match: B0F817 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.7e-09
Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 1  MDSSSTLALSLLLMLFTNLHAVEESL-LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHI 60
          M SS  L  S+ L+L  +LHA +E + LLPETTVT +N++ GP+L +HC+SK DDLG ++
Sbjct: 1  MTSSLALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNV 60

Query: 61 LQPDGSYSF 69
          +  D SYSF
Sbjct: 61 VSSDKSYSF 69

[Close]
BLAST of Lcy03g003560 vs. ExPASy TrEMBL
Match: B0F818 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.0e-08
Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 0 

Query: 7   LALSLLLMLFTNLHAVEESL-LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGS 66
           L  S+ L+L  +LHA +E + LLPETTVT +N++ GP+L +HC+SK DDLG +++  D S
Sbjct: 77  LGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKS 136

Query: 67  YSF 69
           YSF
Sbjct: 137 YSF 139

[Close]
BLAST of Lcy03g003560 vs. ExPASy TrEMBL
Match: A0A5A7TXE8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00180 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 5.6e-07
Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 0 

Query: 11 LLLMLFTNLHAVEESL-LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSF 69
          + L+L  +L A +E + LLPETTV  +N++ GP+L +HC+SK DDLG +++ PD SYSF
Sbjct: 1  MFLLLPISLSATDELISLLPETTVAIVNEVGGPLLGIHCRSKQDDLGVNVVSPDKSYSF 59

[Close]
BLAST of Lcy03g003560 vs. ExPASy TrEMBL
Match: A0A5A7TT98 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00010 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.8e-06
Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 27  LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSF 69
           LLPETTVT +N++ GP+L +HC+SK DDLG +++  D SYSF
Sbjct: 75  LLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSF 116

[Close]
BLAST of Lcy03g003560 vs. ExPASy TrEMBL
Match: A0A5D3C9Q3 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001780 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.8e-06
Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0 

Query: 1  MDSSSTLALSLLLMLFTNLHAVEESLLL-PETTVTTINKMA-GPVLSVHCKSKDDDLGAH 60
          M SS TLALSLL+    NLH ++ S+ + P TTV  +N++  G  ++VHCKSK+DDLG H
Sbjct: 1  MGSSPTLALSLLIFFLCNLHTIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61 ILQPDGSYSF 69
          +L     YSF
Sbjct: 61 VLPLGQGYSF 70

[Close]
BLAST of Lcy03g003560 vs. NCBI nr
Match: ABY56091.1 (self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility protein 3 [Cucumis melo] >ABY56096.1 self-incompatibility protein 4 [Cucumis melo])

HSP 1 Score: 72.0 bits (175), Expect = 5.5e-09
Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 1  MDSSSTLALSLLLMLFTNLHAVEESL-LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHI 60
          M SS  L  S+ L+L  +LHA +E + LLPETTVT +N++ GP+L +HC+SK DDLG ++
Sbjct: 1  MTSSLALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNV 60

Query: 61 LQPDGSYSF 69
          +  D SYSF
Sbjct: 61 VSSDKSYSF 69

[Close]
BLAST of Lcy03g003560 vs. NCBI nr
Match: ABY56092.1 (self-incompatibility protein 2 [Cucumis melo])

HSP 1 Score: 68.6 bits (166), Expect = 6.1e-08
Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 0 

Query: 7   LALSLLLMLFTNLHAVEESL-LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGS 66
           L  S+ L+L  +LHA +E + LLPETTVT +N++ GP+L +HC+SK DDLG +++  D S
Sbjct: 77  LGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKS 136

Query: 67  YSF 69
           YSF
Sbjct: 137 YSF 139

[Close]
BLAST of Lcy03g003560 vs. NCBI nr
Match: KAA0046095.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-06
Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 0 

Query: 11 LLLMLFTNLHAVEESL-LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSF 69
          + L+L  +L A +E + LLPETTV  +N++ GP+L +HC+SK DDLG +++ PD SYSF
Sbjct: 1  MFLLLPISLSATDELISLLPETTVAIVNEVGGPLLGIHCRSKQDDLGVNVVSPDKSYSF 59

[Close]
BLAST of Lcy03g003560 vs. NCBI nr
Match: TYK08032.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 5.7e-06
Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0 

Query: 1  MDSSSTLALSLLLMLFTNLHAVEESLLL-PETTVTTINKMA-GPVLSVHCKSKDDDLGAH 60
          M SS TLALSLL+    NLH ++ S+ + P TTV  +N++  G  ++VHCKSK+DDLG H
Sbjct: 1  MGSSPTLALSLLIFFLCNLHTIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61 ILQPDGSYSF 69
          +L     YSF
Sbjct: 61 VLPLGQGYSF 70

[Close]
BLAST of Lcy03g003560 vs. NCBI nr
Match: KAA0046284.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 5.7e-06
Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 27  LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSF 69
           LLPETTVT +N++ GP+L +HC+SK DDLG +++  D SYSF
Sbjct: 75  LLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSF 116

[Close]
BLAST of Lcy03g003560 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 45.4 bits (106), Expect = 5.2e-05
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0 

Query: 30 ETTVTTINKMA-GPVLSVHCKSKDDDLGAHILQPDGSYSF 69
          ++ VT  N++  G  L +HCKS DDDLG  IL P+GS+SF
Sbjct: 37 KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSF 76

[Close]
BLAST of Lcy03g003560 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 44.7 bits (104), Expect = 8.8e-05
Identity = 19/38 (50.00%), Postives = 24/38 (63.16%), Query Frame = 0 

Query: 31 TTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSF 69
          T VT  N + GP L++HCKSK DDLG H++     Y F
Sbjct: 29 TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHF 66

[Close]
BLAST of Lcy03g003560 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 42.7 bits (99), Expect = 3.3e-04
Identity = 18/28 (64.29%), Postives = 22/28 (78.57%), Query Frame = 0 

Query: 41 GPVLSVHCKSKDDDLGAHILQPDGSYSF 69
          G  L++HCKS DDDLG  IL P+GS+SF
Sbjct: 48 GLTLNLHCKSADDDLGLKILAPNGSWSF 75

The following BLAST results are available for this feature:
BLAST of Lcy03g003560 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4JZG17.3e-0452.50S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1[more]
BLAST of Lcy03g003560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
B0F8172.7e-0952.17S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1[more]
B0F8183.0e-0852.38S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1[more]
A0A5A7TXE85.6e-0750.85S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00... [more]
A0A5A7TT982.8e-0659.52S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00... [more]
A0A5D3C9Q32.8e-0650.00S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00... [more]
BLAST of Lcy03g003560 vs. NCBI nr
Match NameE-valueIdentityDescription
ABY56091.15.5e-0952.17self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility p... [more]
ABY56092.16.1e-0852.38self-incompatibility protein 2 [Cucumis melo][more]
KAA0046095.11.2e-0650.85self-incompatibility protein 1 [Cucumis melo var. makuwa][more]
TYK08032.15.7e-0650.00self-incompatibility protein 1 [Cucumis melo var. makuwa][more]
KAA0046284.15.7e-0659.52self-incompatibility protein 1 [Cucumis melo var. makuwa][more]
BLAST of Lcy03g003560 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G12070.15.2e-0552.50Plant self-incompatibility protein S1 family [more]
AT1G04645.18.8e-0550.00Plant self-incompatibility protein S1 family [more]
AT5G12060.13.3e-0464.29Plant self-incompatibility protein S1 family [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 169..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..109
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 33..68
e-value: 6.2E-7
score: 29.9

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g003560.1Lcy03g003560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0060320 rejection of self pollen
cellular_component GO:0005576 extracellular region