Lcy03g003540 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g003540
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	S-protein homolog
Location	Chr03: 14905849 .. 14906253 (-)
RNA-Seq Expression	Lcy03g003540
Synteny	Lcy03g003540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCATCATCAACCCTTGCACTCTCTCTCTTGCTAATGCTTTTCACCAACTTACATGCTGTTGAAGAAAGCTTACTTTTGCCAGAAACTACGGTGACCACTATTAATAAAATGGCTGGACCAGTGCTAAGCGTTCACTGCAAATCAAAGGATGATGACTTGGGAGCTCACATACTACAGCCAGATGGAAGCTACTCCTTTACCTTTAGACCAAATGTTTTTGGTACGACGCTATTTACCTGCATCTTTCAATGGACCGAGACTCACAACTTCGCTATCTTCGACTTTCATAGAGATGCAAACCGTTGCACTGATTGCAGATGGGAAATTTATCGGGACGGGCCTTGTTTGTTGCATCCGAAAGACCTTGGAACGTATAATGTTTGCTTTCCTTGGAACTAG

mRNA sequence

ATGGATTCATCATCAACCCTTGCACTCTCTCTCTTGCTAATGCTTTTCACCAACTTACATGCTGTTGAAGAAAGCTTACTTTTGCCAGAAACTACGGTGACCACTATTAATAAAATGGCTGGACCAGTGCTAAGCGTTCACTGCAAATCAAAGGATGATGACTTGGGAGCTCACATACTACAGCCAGATGGAAGCTACTCCTTTACCTTTAGACCAAATGTTTTTGGTACGACGCTATTTACCTGCATCTTTCAATGGACCGAGACTCACAACTTCGCTATCTTCGACTTTCATAGAGATGCAAACCGTTGCACTGATTGCAGATGGGAAATTTATCGGGACGGGCCTTGTTTGTTGCATCCGAAAGACCTTGGAACGTATAATGTTTGCTTTCCTTGGAACTAG

Coding sequence (CDS)

ATGGATTCATCATCAACCCTTGCACTCTCTCTCTTGCTAATGCTTTTCACCAACTTACATGCTGTTGAAGAAAGCTTACTTTTGCCAGAAACTACGGTGACCACTATTAATAAAATGGCTGGACCAGTGCTAAGCGTTCACTGCAAATCAAAGGATGATGACTTGGGAGCTCACATACTACAGCCAGATGGAAGCTACTCCTTTACCTTTAGACCAAATGTTTTTGGTACGACGCTATTTACCTGCATCTTTCAATGGACCGAGACTCACAACTTCGCTATCTTCGACTTTCATAGAGATGCAAACCGTTGCACTGATTGCAGATGGGAAATTTATCGGGACGGGCCTTGTTTGTTGCATCCGAAAGACCTTGGAACGTATAATGTTTGCTTTCCTTGGAACTAG

Protein sequence

MDSSSTLALSLLLMLFTNLHAVEESLLLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSFTFRPNVFGTTLFTCIFQWTETHNFAIFDFHRDANRCTDCRWEIYRDGPCLLHPKDLGTYNVCFPWN

Homology

[Close]

BLAST of Lcy03g003540 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.4e-23
Identity = 50/104 (48.08%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 31  TTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSFTFRPNVFGTTLFTCIFQW-TET 90
           T VT  N + GP L++HCKSK DDLG H++     Y F F+PN++ +TLF C FQW ++ 
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQF 88

Query: 91  HNFAIFDFHRDANRCTDCRWEIYRDGPCLLHPKDLGTYNVCFPW 134
            +F I+D  RD   C DC+WEI  DGPC      LG    CFPW
Sbjct: 89  KSFDIYDAQRDQGICDDCQWEIKPDGPC-----RLGKKAKCFPW 127

[Close]

BLAST of Lcy03g003540 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.4e-20
Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 41  GPVLSVHCKSKDDDLGAHILQPDGSYSFTFRPNVFGTTLFTCIFQWT-ETHNFAIFDFHR 100
           G  L++HCKS DDDLG  IL P+GS+SF FR ++ GTTLF C F W  ++  F I+D  R
Sbjct: 48  GLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDR 107

Query: 101 DANR----CTDCRWEIYRDGPCLLHPKDLGTYNVCFPWN 135
           D  R    C +C W+I   GPC+    D   +N+C+ WN
Sbjct: 108 DGVRSHISCINCIWDISIQGPCMFSESD-HAFNICYDWN 145

[Close]

BLAST of Lcy03g003540 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.2e-19
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 44  LSVHCKSKDDDLGAHILQPDGSYSFTFRPNVFGTTLFTCIFQW-TETHNFAIFDFHRDA- 103
           L  HCKSKDDDLG   LQP  S+SF+F    FG TL+ C F W  E+H+F I+  HRD+ 
Sbjct: 62  LLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDSG 121

Query: 104 --NRCTD--CRWEIYRDGPCLLHPKDLGTYNVCFPWN 135
             N+C    C W+I R+GPC  +  +   +++C+PWN
Sbjct: 122 GDNKCESDRCVWKIRRNGPCRFN-DETKQFDLCYPWN 157

[Close]

BLAST of Lcy03g003540 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.4e-18
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 30  ETTVTTINKMA-GPVLSVHCKSKDDDLGAHILQPDGSYSFTFRPNVF-GTTLFTCIFQWT 89
           ++ VT  N++  G  L +HCKS DDDLG  IL P+GS+SF FRP++  G TLF C F W 
Sbjct: 37  KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWP 96

Query: 90  -ETHNFAIFDFHRDANR----CTDCRWEIYRDGPCLLHPKDLGTYNVCFPWN 135
            ++  F I+D  RD  R    C  C W+I + GPC     D   +N+C+ WN
Sbjct: 97  GQSKWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSEID-DAFNICYDWN 147

[Close]

BLAST of Lcy03g003540 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.4e-15
Identity = 50/142 (35.21%), Postives = 73/142 (51.41%), Query Frame = 0


Query: 1   MDSSSTLALSLLLMLFTNLHAVEESLLLPETTVTTINKMA-GPVLSVHCKSKDDDLGAHI 60
           M +SS + + L ++LF  + +        +T VT  N ++    L++ C+SKDDDLG H+
Sbjct: 1   MKNSSKIFVVLSIILFYVISSCHGYNPFAKTVVTVTNNISPQTTLTISCRSKDDDLGEHL 60

Query: 61  LQPDGSYSFTFRPNVFGTTLFTCIFQWTETHNFAIFDFH---RDANRCTDCRWEIYRDGP 120
           L    ++ + FRP+ F TTLFTC F W   +N   FD +   RD   C  C W I  D  
Sbjct: 61  LLHGQAFLWKFRPSWFRTTLFTCKFLW--NNNVKWFDTYRSDRDQGHCYSCNWSINADSA 120

Query: 121 CLLHPKDLGTYNV----CFPWN 135
           C+      G +N     C+PWN
Sbjct: 121 CI-----SGNFNKKFDRCYPWN 135

[Close]

BLAST of Lcy03g003540 vs. ExPASy TrEMBL
Match: B0F817 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.8e-35
Identity = 73/137 (53.28%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 1   MDSSSTLALSLLLMLFTNLHAVEESL-LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHI 60
           M SS  L  S+ L+L  +LHA +E + LLPETTVT +N++ GP+L +HC+SK DDLG ++
Sbjct: 1   MTSSLALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNV 60

Query: 61  LQPDGSYSFTFRPNVFGTTLFTCIFQWT--ETHNFAIFDFHRDANRCTDCRWEIYRDGPC 120
           +  D SYSF FRPNV+GTTLF C+F+W   + H F I+DF RD   CT+CRW +Y  GPC
Sbjct: 61  VSSDKSYSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPC 120

Query: 121 LLHPKDLGTYNVCFPWN 135
           L H +   T   CFPWN
Sbjct: 121 LQHSE---TSITCFPWN 134

[Close]

BLAST of Lcy03g003540 vs. ExPASy TrEMBL
Match: B0F818 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 5.5e-34
Identity = 70/131 (53.44%), Postives = 92/131 (70.23%), Query Frame = 0


Query: 7   LALSLLLMLFTNLHAVEESL-LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGS 66
           L  S+ L+L  +LHA +E + LLPETTVT +N++ GP+L +HC+SK DDLG +++  D S
Sbjct: 77  LGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKS 136

Query: 67  YSFTFRPNVFGTTLFTCIFQWT--ETHNFAIFDFHRDANRCTDCRWEIYRDGPCLLHPKD 126
           YSF FRPNV+GTTLF C+F+W   + H F I+DF RD   CT+CRW +Y  GPCL H + 
Sbjct: 137 YSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHSE- 196

Query: 127 LGTYNVCFPWN 135
             T   CFPWN
Sbjct: 197 --TSITCFPWN 204

[Close]

BLAST of Lcy03g003540 vs. ExPASy TrEMBL
Match: A0A5A7TXE8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00180 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.3e-32
Identity = 67/127 (52.76%), Postives = 88/127 (69.29%), Query Frame = 0


Query: 11  LLLMLFTNLHAVEESL-LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSFT 70
           + L+L  +L A +E + LLPETTV  +N++ GP+L +HC+SK DDLG +++ PD SYSF 
Sbjct: 1   MFLLLPISLSATDELISLLPETTVAIVNEVGGPLLGIHCRSKQDDLGVNVVSPDKSYSFN 60

Query: 71  FRPNVFGTTLFTCIFQWT--ETHNFAIFDFHRDANRCTDCRWEIYRDGPCLLHPKDLGTY 130
           F PN++GTTLF C+F+W   + H F I+DF RD   CT+CRW IY  GPCL H K   T 
Sbjct: 61  FGPNIWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLIYASGPCLQHSK---TS 120

Query: 131 NVCFPWN 135
             CFPWN
Sbjct: 121 VTCFPWN 124

[Close]

BLAST of Lcy03g003540 vs. ExPASy TrEMBL
Match: A0A5A7TT98 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00010 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 8.8e-32
Identity = 61/110 (55.45%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 27  LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSFTFRPNVFGTTLFTCIFQW 86
           LLPETTVT +N++ GP+L +HC+SK DDLG +++  D SYSF FRPN++GTTLF C+F+W
Sbjct: 75  LLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNIWGTTLFYCVFEW 134

Query: 87  T--ETHNFAIFDFHRDANRCTDCRWEIYRDGPCLLHPKDLGTYNVCFPWN 135
              + H F I+DF RD   CT+CRW +Y  GPCL H +   T   CFPWN
Sbjct: 135 VKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHSE---TSITCFPWN 181

[Close]

BLAST of Lcy03g003540 vs. ExPASy TrEMBL
Match: A0A5A7TWM4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004070 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 7.2e-26
Identity = 68/136 (50.00%), Postives = 88/136 (64.71%), Query Frame = 0


Query: 1   MDSSSTLALSLLLMLFTNLHAVEESLLL-PETTVTTINKMA-GPVLSVHCKSKDDDLGAH 60
           M SS TLALSLL++   NL A++ S+ + P TTV  +N++  G  ++VHCKSK+DDLG H
Sbjct: 1   MGSSPTLALSLLILFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  ILQPDGSYSFTFRPNVFGTTLFTCIFQWTETHN---FAIFDFHRDANRCTDCRWEIYRDG 120
           +L     YSF FRPN+ GTTLF C F WT  H    F IFD  RDA +CT CRW I+   
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 PCLLHPKDLGTYNVCF 132
            CL  PK+ G  ++C+
Sbjct: 121 MCLQDPKNPGK-DICY 135

[Close]

BLAST of Lcy03g003540 vs. NCBI nr
Match: ABY56091.1 (self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility protein 3 [Cucumis melo] >ABY56096.1 self-incompatibility protein 4 [Cucumis melo])

HSP 1 Score: 157.5 bits (397), Expect = 7.9e-35
Identity = 73/137 (53.28%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 1   MDSSSTLALSLLLMLFTNLHAVEESL-LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHI 60
           M SS  L  S+ L+L  +LHA +E + LLPETTVT +N++ GP+L +HC+SK DDLG ++
Sbjct: 1   MTSSLALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNV 60

Query: 61  LQPDGSYSFTFRPNVFGTTLFTCIFQWT--ETHNFAIFDFHRDANRCTDCRWEIYRDGPC 120
           +  D SYSF FRPNV+GTTLF C+F+W   + H F I+DF RD   CT+CRW +Y  GPC
Sbjct: 61  VSSDKSYSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPC 120

Query: 121 LLHPKDLGTYNVCFPWN 135
           L H +   T   CFPWN
Sbjct: 121 LQHSE---TSITCFPWN 134

[Close]

BLAST of Lcy03g003540 vs. NCBI nr
Match: ABY56092.1 (self-incompatibility protein 2 [Cucumis melo])

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-33
Identity = 70/131 (53.44%), Postives = 92/131 (70.23%), Query Frame = 0


Query: 7   LALSLLLMLFTNLHAVEESL-LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGS 66
           L  S+ L+L  +LHA +E + LLPETTVT +N++ GP+L +HC+SK DDLG +++  D S
Sbjct: 77  LGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKS 136

Query: 67  YSFTFRPNVFGTTLFTCIFQWT--ETHNFAIFDFHRDANRCTDCRWEIYRDGPCLLHPKD 126
           YSF FRPNV+GTTLF C+F+W   + H F I+DF RD   CT+CRW +Y  GPCL H + 
Sbjct: 137 YSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHSE- 196

Query: 127 LGTYNVCFPWN 135
             T   CFPWN
Sbjct: 197 --TSITCFPWN 204

[Close]

BLAST of Lcy03g003540 vs. NCBI nr
Match: KAA0046095.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 148.3 bits (373), Expect = 4.8e-32
Identity = 67/127 (52.76%), Postives = 88/127 (69.29%), Query Frame = 0


Query: 11  LLLMLFTNLHAVEESL-LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSFT 70
           + L+L  +L A +E + LLPETTV  +N++ GP+L +HC+SK DDLG +++ PD SYSF 
Sbjct: 1   MFLLLPISLSATDELISLLPETTVAIVNEVGGPLLGIHCRSKQDDLGVNVVSPDKSYSFN 60

Query: 71  FRPNVFGTTLFTCIFQWT--ETHNFAIFDFHRDANRCTDCRWEIYRDGPCLLHPKDLGTY 130
           F PN++GTTLF C+F+W   + H F I+DF RD   CT+CRW IY  GPCL H K   T 
Sbjct: 61  FGPNIWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLIYASGPCLQHSK---TS 120

Query: 131 NVCFPWN 135
             CFPWN
Sbjct: 121 VTCFPWN 124

[Close]

BLAST of Lcy03g003540 vs. NCBI nr
Match: KAA0046284.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-31
Identity = 61/110 (55.45%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 27  LLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSFTFRPNVFGTTLFTCIFQW 86
           LLPETTVT +N++ GP+L +HC+SK DDLG +++  D SYSF FRPN++GTTLF C+F+W
Sbjct: 75  LLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNIWGTTLFYCVFEW 134

Query: 87  T--ETHNFAIFDFHRDANRCTDCRWEIYRDGPCLLHPKDLGTYNVCFPWN 135
              + H F I+DF RD   CT+CRW +Y  GPCL H +   T   CFPWN
Sbjct: 135 VKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHSE---TSITCFPWN 181

[Close]

BLAST of Lcy03g003540 vs. NCBI nr
Match: KAA0045871.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-25
Identity = 68/136 (50.00%), Postives = 88/136 (64.71%), Query Frame = 0


Query: 1   MDSSSTLALSLLLMLFTNLHAVEESLLL-PETTVTTINKMA-GPVLSVHCKSKDDDLGAH 60
           M SS TLALSLL++   NL A++ S+ + P TTV  +N++  G  ++VHCKSK+DDLG H
Sbjct: 1   MGSSPTLALSLLILFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  ILQPDGSYSFTFRPNVFGTTLFTCIFQWTETHN---FAIFDFHRDANRCTDCRWEIYRDG 120
           +L     YSF FRPN+ GTTLF C F WT  H    F IFD  RDA +CT CRW I+   
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 PCLLHPKDLGTYNVCF 132
            CL  PK+ G  ++C+
Sbjct: 121 MCLQDPKNPGK-DICY 135

[Close]

BLAST of Lcy03g003540 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 107.8 bits (268), Expect = 6.7e-24
Identity = 50/104 (48.08%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 31  TTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSFTFRPNVFGTTLFTCIFQW-TET 90
           T VT  N + GP L++HCKSK DDLG H++     Y F F+PN++ +TLF C FQW ++ 
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQF 88

Query: 91  HNFAIFDFHRDANRCTDCRWEIYRDGPCLLHPKDLGTYNVCFPW 134
            +F I+D  RD   C DC+WEI  DGPC      LG    CFPW
Sbjct: 89  KSFDIYDAQRDQGICDDCQWEIKPDGPC-----RLGKKAKCFPW 127

[Close]

BLAST of Lcy03g003540 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21
Identity = 52/112 (46.43%), Postives = 67/112 (59.82%), Query Frame = 0


Query: 29  PETTVTTINKMAGPV-LSVHCKSKDDDLGAHILQPDGSYSFTFRPNVFGTTLFTCIFQW- 88
           P TTV   N + G + L  HCKSK+DDLG   +  +G++SF FRP+VFG TLF C F W 
Sbjct: 26  PRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIWD 85

Query: 89  TETHNFAIFDFHRDAN----RCTDCRWEIYRDGPCLLHPKDLGTYNVCFPWN 135
            E H F I+   RD       C  C W+I +DGPC L+ K+   ++VC PWN
Sbjct: 86  KELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLN-KNSNMFDVCLPWN 136

[Close]

BLAST of Lcy03g003540 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 99.0 bits (245), Expect = 3.1e-21
Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 41  GPVLSVHCKSKDDDLGAHILQPDGSYSFTFRPNVFGTTLFTCIFQWT-ETHNFAIFDFHR 100
           G  L++HCKS DDDLG  IL P+GS+SF FR ++ GTTLF C F W  ++  F I+D  R
Sbjct: 48  GLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDR 107

Query: 101 DANR----CTDCRWEIYRDGPCLLHPKDLGTYNVCFPWN 135
           D  R    C +C W+I   GPC+    D   +N+C+ WN
Sbjct: 108 DGVRSHISCINCIWDISIQGPCMFSESD-HAFNICYDWN 145

[Close]

BLAST of Lcy03g003540 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 94.7 bits (234), Expect = 5.8e-20
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 44  LSVHCKSKDDDLGAHILQPDGSYSFTFRPNVFGTTLFTCIFQW-TETHNFAIFDFHRDA- 103
           L  HCKSKDDDLG   LQP  S+SF+F    FG TL+ C F W  E+H+F I+  HRD+ 
Sbjct: 62  LLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDSG 121

Query: 104 --NRCTD--CRWEIYRDGPCLLHPKDLGTYNVCFPWN 135
             N+C    C W+I R+GPC  +  +   +++C+PWN
Sbjct: 122 GDNKCESDRCVWKIRRNGPCRFN-DETKQFDLCYPWN 157

[Close]

BLAST of Lcy03g003540 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-19
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 30  ETTVTTINKMA-GPVLSVHCKSKDDDLGAHILQPDGSYSFTFRPNVF-GTTLFTCIFQWT 89
           ++ VT  N++  G  L +HCKS DDDLG  IL P+GS+SF FRP++  G TLF C F W 
Sbjct: 37  KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWP 96

Query: 90  -ETHNFAIFDFHRDANR----CTDCRWEIYRDGPCLLHPKDLGTYNVCFPWN 135
            ++  F I+D  RD  R    C  C W+I + GPC     D   +N+C+ WN
Sbjct: 97  GQSKWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSEID-DAFNICYDWN 147

The following BLAST results are available for this feature:

BLAST of Lcy03g003540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	9.4e-23	48.08	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
Q9FMQ4	4.4e-20	46.46	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F4JLQ5	8.2e-19	46.39	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
F4JZG1	2.4e-18	43.75	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
P0DN93	9.4e-15	35.21	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]

BLAST of Lcy03g003540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B0F817	3.8e-35	53.28	S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1	[more]
B0F818	5.5e-34	53.44	S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1	[more]
A0A5A7TXE8	2.3e-32	52.76	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00...	[more]
A0A5A7TT98	8.8e-32	55.45	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00...	[more]
A0A5A7TWM4	7.2e-26	50.00	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of Lcy03g003540 vs. NCBI nr


Match Name	E-value	Identity	Description
ABY56091.1	7.9e-35	53.28	self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility p...	[more]
ABY56092.1	1.1e-33	53.44	self-incompatibility protein 2 [Cucumis melo]	[more]
KAA0046095.1	4.8e-32	52.76	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0046284.1	1.8e-31	55.45	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0045871.1	1.5e-25	50.00	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Lcy03g003540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	6.7e-24	48.08	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	1.1e-21	46.43	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	3.1e-21	46.46	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	5.8e-20	46.39	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	1.7e-19	43.75	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 33..133 e-value: 5.6E-28 score: 97.5
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 13..118
None	No IPR available	PANTHER	PTHR31232:SF53	S-PROTEIN HOMOLOG 29-RELATED	coord: 13..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g003540.1	Lcy03g003540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity