Lcy03g003520 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCATCATCAACCCTTGCACTCTCTCTCTTGCTAATGCTTTTCACCAACTTACATGCTGTTGAAGAAAGCTTACTTTTGCCAGAAACTACGGTGACCACTATTAATAAAATGGCTGGACCAGTGCTAAGCGTTCACTGCAAATCAAAGGATGATGACTTGGGAGCTCACATACTACAGCCAGATGGAAGCTACTCCTTTACCTTTAGACCAAATGTTTTTGGTACGACGCTATTTACCTGCATCTTTCAATGGACCGAGACTCACAACTTCGCTATCTTCGACTTTCATAGAGATGGAAACCGTTGCACTGATTGCAGATGGGAAATTTATCGAGACGGGCCTTGTTTGTTGCATCCGAAAGACCTTGGAACGTATAATGTTTGCTTTCCTTGGAACTAG ATGGATTCATCATCAACCCTTGCACTCTCTCTCTTGCTAATGCTTTTCACCAACTTACATGCTGTTGAAGAAAGCTTACTTTTGCCAGAAACTACGGTGACCACTATTAATAAAATGGCTGGACCAGTGCTAAGCGTTCACTGCAAATCAAAGGATGATGACTTGGGAGCTCACATACTACAGCCAGATGGAAGCTACTCCTTTACCTTTAGACCAAATGTTTTTGGTACGACGCTATTTACCTGCATCTTTCAATGGACCGAGACTCACAACTTCGCTATCTTCGACTTTCATAGAGATGGAAACCGTTGCACTGATTGCAGATGGGAAATTTATCGAGACGGGCCTTGTTTGTTGCATCCGAAAGACCTTGGAACGTATAATGTTTGCTTTCCTTGGAACTAG ATGGATTCATCATCAACCCTTGCACTCTCTCTCTTGCTAATGCTTTTCACCAACTTACATGCTGTTGAAGAAAGCTTACTTTTGCCAGAAACTACGGTGACCACTATTAATAAAATGGCTGGACCAGTGCTAAGCGTTCACTGCAAATCAAAGGATGATGACTTGGGAGCTCACATACTACAGCCAGATGGAAGCTACTCCTTTACCTTTAGACCAAATGTTTTTGGTACGACGCTATTTACCTGCATCTTTCAATGGACCGAGACTCACAACTTCGCTATCTTCGACTTTCATAGAGATGGAAACCGTTGCACTGATTGCAGATGGGAAATTTATCGAGACGGGCCTTGTTTGTTGCATCCGAAAGACCTTGGAACGTATAATGTTTGCTTTCCTTGGAACTAG MDSSSTLALSLLLMLFTNLHAVEESLLLPETTVTTINKMAGPVLSVHCKSKDDDLGAHILQPDGSYSFTFRPNVFGTTLFTCIFQWTETHNFAIFDFHRDGNRCTDCRWEIYRDGPCLLHPKDLGTYNVCFPWN Homology
BLAST of Lcy03g003520 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 9.4e-23 Identity = 50/104 (48.08%), Postives = 64/104 (61.54%), Query Frame = 0
BLAST of Lcy03g003520 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 6.7e-21 Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = 0
BLAST of Lcy03g003520 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.7e-19 Identity = 50/112 (44.64%), Postives = 67/112 (59.82%), Query Frame = 0
BLAST of Lcy03g003520 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 8.2e-19 Identity = 45/97 (46.39%), Postives = 60/97 (61.86%), Query Frame = 0
BLAST of Lcy03g003520 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14 Identity = 50/142 (35.21%), Postives = 73/142 (51.41%), Query Frame = 0
BLAST of Lcy03g003520 vs. ExPASy TrEMBL
Match: B0F817 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 5.9e-36 Identity = 74/137 (54.01%), Postives = 96/137 (70.07%), Query Frame = 0
BLAST of Lcy03g003520 vs. ExPASy TrEMBL
Match: B0F818 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 8.5e-35 Identity = 71/131 (54.20%), Postives = 93/131 (70.99%), Query Frame = 0
BLAST of Lcy03g003520 vs. ExPASy TrEMBL
Match: A0A5A7TXE8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00180 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 3.6e-33 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of Lcy03g003520 vs. ExPASy TrEMBL
Match: A0A5A7TT98 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00010 PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.4e-32 Identity = 62/110 (56.36%), Postives = 80/110 (72.73%), Query Frame = 0
BLAST of Lcy03g003520 vs. ExPASy TrEMBL
Match: A0A5A7TWM4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004070 PE=3 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.6e-25 Identity = 67/136 (49.26%), Postives = 87/136 (63.97%), Query Frame = 0
BLAST of Lcy03g003520 vs. NCBI nr
Match: ABY56091.1 (self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility protein 3 [Cucumis melo] >ABY56096.1 self-incompatibility protein 4 [Cucumis melo]) HSP 1 Score: 160.2 bits (404), Expect = 1.2e-35 Identity = 74/137 (54.01%), Postives = 96/137 (70.07%), Query Frame = 0
BLAST of Lcy03g003520 vs. NCBI nr
Match: ABY56092.1 (self-incompatibility protein 2 [Cucumis melo]) HSP 1 Score: 156.4 bits (394), Expect = 1.8e-34 Identity = 71/131 (54.20%), Postives = 93/131 (70.99%), Query Frame = 0
BLAST of Lcy03g003520 vs. NCBI nr
Match: KAA0046095.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 151.0 bits (380), Expect = 7.4e-33 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of Lcy03g003520 vs. NCBI nr
Match: KAA0046284.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 149.1 bits (375), Expect = 2.8e-32 Identity = 62/110 (56.36%), Postives = 80/110 (72.73%), Query Frame = 0
BLAST of Lcy03g003520 vs. NCBI nr
Match: KAA0045871.1 (putative mitochondrial protein [Cucumis melo var. makuwa]) HSP 1 Score: 125.6 bits (314), Expect = 3.3e-25 Identity = 67/136 (49.26%), Postives = 87/136 (63.97%), Query Frame = 0
BLAST of Lcy03g003520 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 107.8 bits (268), Expect = 6.7e-24 Identity = 50/104 (48.08%), Postives = 64/104 (61.54%), Query Frame = 0
BLAST of Lcy03g003520 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 101.7 bits (252), Expect = 4.8e-22 Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = 0
BLAST of Lcy03g003520 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21 Identity = 52/112 (46.43%), Postives = 67/112 (59.82%), Query Frame = 0
BLAST of Lcy03g003520 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 95.9 bits (237), Expect = 2.6e-20 Identity = 50/112 (44.64%), Postives = 67/112 (59.82%), Query Frame = 0
BLAST of Lcy03g003520 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 94.7 bits (234), Expect = 5.8e-20 Identity = 45/97 (46.39%), Postives = 60/97 (61.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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