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Lcy02g016590 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATTATCCCTTTGAATCCGCTGTAGAATTTATTCCAGTTTCGAAATCCCCTCATGTCTGTTCCTGATCTTAAAGTTATCTCATCATTTTTATCGCGGTCCAAATCTACTTCTCCTACTCAACTCTATCTATTTTCCTTCGATTTTTAAACTCCACCAGCCTTGTTTTTCGCTCGCTTGTTCTTAATTTTCCCCTTTTCTAATATTTATGATGCTCATAGATCTGTCTGATCTTCGCAGTAACTTTATCTTCCACTTCTTCTCTTCGATCTGTTCTTCTACTTGCTATTTTCATTTCTGGACAGACTTCGTCCATTCTGTAATGGGTGGGTTCTTTTTAACTTGTGGAAACTGATGTTCTTTCGAGTTTGAAGAAACCCATCTCCCAAGAGTTTCTAGAGCTGGAGAAAACTTTAGCTTTTGTGTGATTCAGTGACCATGTTTTTGGAATTAGGGTTTTATGCGTGATAATTTGATGATTTTGTAGCTCTCCGGAGGAAAGAATTTGTGGGTTTTTTTCGTAGTGGGTGAAATTGTTTGGAATGGATTACAGTGGGGGAAACGTAGTCCATGTGATCCCCGGGACGAGCAGTGAGAATTGGCCTGGCGAAGTTTGGGCGACCGAAGACGAATACAGAGCTTGGAACAATGGCGGTGATGGGTCTGTGGATACGCCCTCGAATTCGAGTTATGATCAAAGGCAATCCCAAAGCCGTTCCGGAAGCGAACCCCCAAACAAGAAATCGAGAAGCTCGCAGGATGTTACGTCCGCGAATCGATCAAAAGCGATAGGTAAAATGTTCTTCAAGACCAAACTCTGCTGCAAATTCCGCGCTGGAACATGCCCTTACATCACAAATTGCAATTTCGCTCATAGCATTGAGGAGCTTAGGCGGCCACCACATAATTGGCAGGTATTTGGACTGGTTCTTAGTTAATGGTTAATCTTTTTGTTATTGCCTCTGTTTAATTGTTAGCTTGATAGCTGAAATCTCTAGTTGGGTAGTTTAGTTTGTTAGTTAGTTGAGAACTTGAGAGTATAACCATTTTTGCTACGACTATACACTGGTATTTATGCTTCCTCTTGTATACGGAATTGGATGAATAGAATATCACGAGTTCCTCATTGTATTGAGTATTGTTAGCAGGAAATTGTGGCCGCCCATGAGGAAGAGAAGGCAGTAATGTCAGAGCCGAGGGAGGAATTTCAGATTCCTTCACTTGGGACATCGAATTTTGGTTCCGAGTCGCAGAGATCATACAAAGGTCGACATTGCAAGAAGTTTTACACCGAGGAGGGCTGCCCATATGGGGATAGCTGTACATTTCTTCACGATGAGCAGTCGAAGAATCGAGAGAGTGTGGCAATAAGCTTGGGTCCTGGTGGCTACAGTGGTGGTGGTGGTGGTGGTTCAGGAAATGGATCCAACACCAAGCCTTCAAATTGGAAAACAAGGATTTGTAACAAGTGGGAGCTGACAGGATATTGCCCATTCGGAAACAAATGCCATTTTGCTCATGGTGCTGCTGGTATGTTTCCTCATAGTTTCCTCTATCCTTCTGTTGATGAAATGGTTGTGTATGGGTCTGCATTATAAATGAAAATGCTCAAGATTATGTCTCAATTTCACCTTTTCTTGGATTGTTAGTATAGTTTCCATTATCTGTTCAATCACTTAATCTGTCAGCACTCAACACTCTAAGGCCCAGGCCTTGGATGAAGATGGTCTTTCTAATTTCTTTAAAAGAAAGCTCTCTTACCATGCCCCATAGGATGCTTCTGCTGAATCTTGCTGGACCTTTGTTGTGATTTTAAAGAAAAATGATTCCATATGTAGTTTAAGTTCGTTCTTTTGTATCTGCCACATGTATATGGCTTAGATTTTAAATTGAGTCCATCTACTCTCCGTTTGCCATTGTTTCGTTCTGTGTTGTTTTACGATGTAAGATTTTCTTTCAACTTTCAAGACTCTGAAATCAAAACATTGCAAAGATATATTTGTCAGAGTTGTTGGGATAGCTCATTCTTTGCTTCAGGTTTAGGACTCCTCAATCACCCTTTGTGACTCACTTTCTCAACTGAAGAGTTTGTTTATGTATACCATTGTTAAATATTCTACCGAAGATTTGCTGATTCAAAATGGACATGCGAAAAACTTAAAAAATGTGGAACTTAAATGACTTTGGGGAATATGAGGAAAGTTTTCAAGACATTATAATAACAATAAAGGCTTAGTTTTGTCTGGGGAGTGTTTTCAGAATATAGGATCCTAGATGTGCAATCTTTATTAAATCTTGTAAGGCAGGCACAGAGGCCATTATATCGACAAAGTGTTTAAGTTCAGCTTCAGGATCAACTTGGTGATCCGTTGTGCTATGAACTTTAAATGTTAAGCTGGAACCTTTTGGCTACTATGATTACTCACTTGTTGTTATGCTCATGCATATCTAACTATGCTTCTACTTTGCTTGTGATTTTTCGTGTCTTGTTTCGAGTCACCAGTATTTATCTGAACTTTGATACAGCCATAGTCAGTTAATTGATTAGACTGATAAACATAAGAACATCGTGTGTCTTGAACAAACAAATGTTGAGTGAGTTCTTTAGTTTTAGTGGTTTTAGATTTAATACTTTGAATTAACCACAGAATTGCACCGTTATGGTGGTGGGCTTATGGAGACAGAAACTAGAGACTCTTCATCTGCTCCTCCCGACCCGAAGCAGGGAGTATTGCCTAAAGCTCCTGGTGACGCGGTGGTTGCTTCTGTTCCTTCAGCACCTCATTCAGACGTCTATCATGTTGTGGTTCCATCACAGAGGTCAACCATTGTAATTCAAAGGCCAGGACAGAGAACTCATCAGAAGTGGAAGGGCCCTGATAAAATCAGTAGGATATATGGCGACTGGATCGACGACAACGAATAACATGGGTATCGGAGCAATTGCTGAACGTGAATAACGAGAACTTAAAGTTCCATAGTTAACAGGCTGATGGACTTTGTCTCATAAACATTTGGCAGATGAAGATTCTGTTTGTTCAGGTTAAGTCTCGGTTGGTTCTTTCCTTATTCTCGTTTCCAACCCACTTCACTTCCGATCTTCGAAATTTGAAGCATATGGTCTTTATCTGTTAGTGTTGTTATTTCTGTAGTTACTATATGTAATCCTTTTCATTGAAAGAAAAGAGAAAAATGTATGATTGTCACCACCTTCCCAGATTATCATTGAGTAATTCTTCTGTTTTCTGGGAAATCTTTAACCTTATTGTAATGGGAATATGAGTCCTTCAAATGAGGCAGGCAGCAGGTTTTATACACTGACATTTGTGATTGCTGAGGATCCCCAGTGTAGTGTTTGGTAGTTAAACTGTTACATTGTTCCCTTTTTGTATTATGTGTTGTAGGTTGCAATATTCTCGTAACGGTTATCGTTCGTTGCTCTTCCCTTCGTTTGTCGTGTTTTCTGCATAGCTGAAGAAATTGTGCACAGAGCTCGCGTTAAAACTTAAAAGCTTGCTGATGAAATTGCATCATTTTCTACTTAACTTTCTTGTTCAAAGACTGTAGATTCCTGAATAGAATGTATGGTAAAATGCAGAGAATGTTGTTGATAGAGGACATTGGTGTGCTTTGAGATACTCTGTTCTTGCAAAAGACCCTTCTCTATATCAATCTATAAGCTCATCCAACCCAAATGTATATTTTGATTTTTTTTTTTTAATTCTCTGTTCTTG CAAAATTATCCCTTTGAATCCGCTGTAGAATTTATTCCAGTTTCGAAATCCCCTCATGTCTGTTCCTGATCTTAAAGTTATCTCATCATTTTTATCGCGGTCCAAATCTACTTCTCCTACTCAACTCTATCTATTTTCCTTCGATTTTTAAACTCCACCAGCCTTGTTTTTCGCTCGCTTGTTCTTAATTTTCCCCTTTTCTAATATTTATGATGCTCATAGATCTGTCTGATCTTCGCAGTAACTTTATCTTCCACTTCTTCTCTTCGATCTGTTCTTCTACTTGCTATTTTCATTTCTGGACAGACTTCGTCCATTCTGTAATGGGTGGGTTCTTTTTAACTTGTGGAAACTGATGTTCTTTCGAGTTTGAAGAAACCCATCTCCCAAGAGTTTCTAGAGCTGGAGAAAACTTTAGCTTTTGTGTGATTCAGTGACCATGTTTTTGGAATTAGGGTTTTATGCGTGATAATTTGATGATTTTGTAGCTCTCCGGAGGAAAGAATTTGTGGGTTTTTTTCGTAGTGGGTGAAATTGTTTGGAATGGATTACAGTGGGGGAAACGTAGTCCATGTGATCCCCGGGACGAGCAGTGAGAATTGGCCTGGCGAAGTTTGGGCGACCGAAGACGAATACAGAGCTTGGAACAATGGCGGTGATGGGTCTGTGGATACGCCCTCGAATTCGAGTTATGATCAAAGGCAATCCCAAAGCCGTTCCGGAAGCGAACCCCCAAACAAGAAATCGAGAAGCTCGCAGGATGTTACGTCCGCGAATCGATCAAAAGCGATAGGTAAAATGTTCTTCAAGACCAAACTCTGCTGCAAATTCCGCGCTGGAACATGCCCTTACATCACAAATTGCAATTTCGCTCATAGCATTGAGGAGCTTAGGCGGCCACCACATAATTGGCAGCAGGAAATTGTGGCCGCCCATGAGGAAGAGAAGGCAGTAATGTCAGAGCCGAGGGAGGAATTTCAGATTCCTTCACTTGGGACATCGAATTTTGGTTCCGAGTCGCAGAGATCATACAAAGGTCGACATTGCAAGAAGTTTTACACCGAGGAGGGCTGCCCATATGGGGATAGCTGTACATTTCTTCACGATGAGCAGTCGAAGAATCGAGAGAGTGTGGCAATAAGCTTGGGTCCTGGTGGCTACAGTGGTGGTGGTGGTGGTGGTTCAGGAAATGGATCCAACACCAAGCCTTCAAATTGGAAAACAAGGATTTGTAACAAGTGGGAGCTGACAGGATATTGCCCATTCGGAAACAAATGCCATTTTGCTCATGGTGCTGCTGAATTGCACCGTTATGGTGGTGGGCTTATGGAGACAGAAACTAGAGACTCTTCATCTGCTCCTCCCGACCCGAAGCAGGGAGTATTGCCTAAAGCTCCTGGTGACGCGGTGGTTGCTTCTGTTCCTTCAGCACCTCATTCAGACGTCTATCATGTTGTGGTTCCATCACAGAGGTCAACCATTGTAATTCAAAGGCCAGGACAGAGAACTCATCAGAAGTGGAAGGGCCCTGATAAAATCAGTAGGATATATGGCGACTGGATCGACGACAACGAATAACATGGGTATCGGAGCAATTGCTGAACGTGAATAACGAGAACTTAAAGTTCCATAGTTAACAGGCTGATGGACTTTGTCTCATAAACATTTGGCAGATGAAGATTCTGTTTGTTCAGGTTAAGTCTCGGTTGGTTCTTTCCTTATTCTCGTTTCCAACCCACTTCACTTCCGATCTTCGAAATTTGAAGCATATGGTCTTTATCTGTTAGTGTTGTTATTTCTGTAGTTACTATATGTAATCCTTTTCATTGAAAGAAAAGAGAAAAATGTATGATTGTCACCACCTTCCCAGATTATCATTGAGTAATTCTTCTGTTTTCTGGGAAATCTTTAACCTTATTGTAATGGGAATATGAGTCCTTCAAATGAGGCAGGCAGCAGGTTTTATACACTGACATTTGTGATTGCTGAGGATCCCCAGTGTAGTGTTTGGTAGTTAAACTGTTACATTGTTCCCTTTTTGTATTATGTGTTGTAGGTTGCAATATTCTCGTAACGGTTATCGTTCGTTGCTCTTCCCTTCGTTTGTCGTGTTTTCTGCATAGCTGAAGAAATTGTGCACAGAGCTCGCGTTAAAACTTAAAAGCTTGCTGATGAAATTGCATCATTTTCTACTTAACTTTCTTGTTCAAAGACTGTAGATTCCTGAATAGAATGTATGGTAAAATGCAGAGAATGTTGTTGATAGAGGACATTGGTGTGCTTTGAGATACTCTGTTCTTGCAAAAGACCCTTCTCTATATCAATCTATAAGCTCATCCAACCCAAATGTATATTTTGATTTTTTTTTTTTAATTCTCTGTTCTTG ATGGATTACAGTGGGGGAAACGTAGTCCATGTGATCCCCGGGACGAGCAGTGAGAATTGGCCTGGCGAAGTTTGGGCGACCGAAGACGAATACAGAGCTTGGAACAATGGCGGTGATGGGTCTGTGGATACGCCCTCGAATTCGAGTTATGATCAAAGGCAATCCCAAAGCCGTTCCGGAAGCGAACCCCCAAACAAGAAATCGAGAAGCTCGCAGGATGTTACGTCCGCGAATCGATCAAAAGCGATAGGTAAAATGTTCTTCAAGACCAAACTCTGCTGCAAATTCCGCGCTGGAACATGCCCTTACATCACAAATTGCAATTTCGCTCATAGCATTGAGGAGCTTAGGCGGCCACCACATAATTGGCAGCAGGAAATTGTGGCCGCCCATGAGGAAGAGAAGGCAGTAATGTCAGAGCCGAGGGAGGAATTTCAGATTCCTTCACTTGGGACATCGAATTTTGGTTCCGAGTCGCAGAGATCATACAAAGGTCGACATTGCAAGAAGTTTTACACCGAGGAGGGCTGCCCATATGGGGATAGCTGTACATTTCTTCACGATGAGCAGTCGAAGAATCGAGAGAGTGTGGCAATAAGCTTGGGTCCTGGTGGCTACAGTGGTGGTGGTGGTGGTGGTTCAGGAAATGGATCCAACACCAAGCCTTCAAATTGGAAAACAAGGATTTGTAACAAGTGGGAGCTGACAGGATATTGCCCATTCGGAAACAAATGCCATTTTGCTCATGGTGCTGCTGAATTGCACCGTTATGGTGGTGGGCTTATGGAGACAGAAACTAGAGACTCTTCATCTGCTCCTCCCGACCCGAAGCAGGGAGTATTGCCTAAAGCTCCTGGTGACGCGGTGGTTGCTTCTGTTCCTTCAGCACCTCATTCAGACGTCTATCATGTTGTGGTTCCATCACAGAGGTCAACCATTGTAATTCAAAGGCCAGGACAGAGAACTCATCAGAAGTGGAAGGGCCCTGATAAAATCAGTAGGATATATGGCGACTGGATCGACGACAACGAATAA MDYSGGNVVHVIPGTSSENWPGEVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQDVTSANRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQQEIVAAHEEEKAVMSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSSAPPDPKQGVLPKAPGDAVVASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDNE Homology
BLAST of Lcy02g016590 vs. ExPASy Swiss-Prot
Match: Q9LQM3 (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=At1g32360 PE=2 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 6.0e-114 Identity = 236/395 (59.75%), Postives = 262/395 (66.33%), Query Frame = 0
BLAST of Lcy02g016590 vs. ExPASy Swiss-Prot
Match: Q84UQ3 (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159800 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 2.4e-107 Identity = 220/389 (56.56%), Postives = 259/389 (66.58%), Query Frame = 0
BLAST of Lcy02g016590 vs. ExPASy Swiss-Prot
Match: Q5PP65 (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=At2g35430 PE=1 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 8.8e-49 Identity = 136/329 (41.34%), Postives = 161/329 (48.94%), Query Frame = 0
BLAST of Lcy02g016590 vs. ExPASy Swiss-Prot
Match: Q9LT81 (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=At3g19360 PE=2 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.5e-35 Identity = 100/291 (34.36%), Postives = 138/291 (47.42%), Query Frame = 0
BLAST of Lcy02g016590 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.8e-09 Identity = 42/130 (32.31%), Postives = 61/130 (46.92%), Query Frame = 0
BLAST of Lcy02g016590 vs. ExPASy TrEMBL
Match: A0A1S3CQ64 (zinc finger CCCH domain-containing protein 12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503556 PE=4 SV=1) HSP 1 Score: 692.6 bits (1786), Expect = 8.5e-196 Identity = 335/349 (95.99%), Postives = 339/349 (97.13%), Query Frame = 0
BLAST of Lcy02g016590 vs. ExPASy TrEMBL
Match: A0A5D3E502 (Zinc finger CCCH domain-containing protein 12 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004590 PE=4 SV=1) HSP 1 Score: 688.0 bits (1774), Expect = 2.1e-194 Identity = 335/349 (95.99%), Postives = 339/349 (97.13%), Query Frame = 0
BLAST of Lcy02g016590 vs. ExPASy TrEMBL
Match: A0A1S3CQH8 (zinc finger CCCH domain-containing protein 12 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503556 PE=4 SV=1) HSP 1 Score: 686.4 bits (1770), Expect = 6.1e-194 Identity = 334/349 (95.70%), Postives = 338/349 (96.85%), Query Frame = 0
BLAST of Lcy02g016590 vs. ExPASy TrEMBL
Match: A0A0A0LK26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901160 PE=4 SV=1) HSP 1 Score: 682.9 bits (1761), Expect = 6.7e-193 Identity = 334/353 (94.62%), Postives = 339/353 (96.03%), Query Frame = 0
BLAST of Lcy02g016590 vs. ExPASy TrEMBL
Match: A0A6J1EX21 (zinc finger CCCH domain-containing protein 12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437313 PE=4 SV=1) HSP 1 Score: 677.2 bits (1746), Expect = 3.7e-191 Identity = 328/344 (95.35%), Postives = 331/344 (96.22%), Query Frame = 0
BLAST of Lcy02g016590 vs. NCBI nr
Match: XP_008465987.1 (PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X1 [Cucumis melo]) HSP 1 Score: 692.6 bits (1786), Expect = 1.7e-195 Identity = 335/349 (95.99%), Postives = 339/349 (97.13%), Query Frame = 0
BLAST of Lcy02g016590 vs. NCBI nr
Match: XP_038888737.1 (zinc finger CCCH domain-containing protein 12 isoform X1 [Benincasa hispida]) HSP 1 Score: 691.4 bits (1783), Expect = 3.9e-195 Identity = 336/350 (96.00%), Postives = 340/350 (97.14%), Query Frame = 0
BLAST of Lcy02g016590 vs. NCBI nr
Match: XP_011652645.2 (zinc finger CCCH domain-containing protein 12 isoform X1 [Cucumis sativus]) HSP 1 Score: 689.9 bits (1779), Expect = 1.1e-194 Identity = 335/351 (95.44%), Postives = 340/351 (96.87%), Query Frame = 0
BLAST of Lcy02g016590 vs. NCBI nr
Match: TYK31177.1 (zinc finger CCCH domain-containing protein 12 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 688.0 bits (1774), Expect = 4.3e-194 Identity = 335/349 (95.99%), Postives = 339/349 (97.13%), Query Frame = 0
BLAST of Lcy02g016590 vs. NCBI nr
Match: XP_008465989.1 (PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X2 [Cucumis melo]) HSP 1 Score: 686.4 bits (1770), Expect = 1.3e-193 Identity = 334/349 (95.70%), Postives = 338/349 (96.85%), Query Frame = 0
BLAST of Lcy02g016590 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein ) HSP 1 Score: 412.1 bits (1058), Expect = 4.2e-115 Identity = 236/395 (59.75%), Postives = 262/395 (66.33%), Query Frame = 0
BLAST of Lcy02g016590 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 195.7 bits (496), Expect = 6.2e-50 Identity = 136/329 (41.34%), Postives = 161/329 (48.94%), Query Frame = 0
BLAST of Lcy02g016590 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein ) HSP 1 Score: 151.8 bits (382), Expect = 1.0e-36 Identity = 100/291 (34.36%), Postives = 138/291 (47.42%), Query Frame = 0
BLAST of Lcy02g016590 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein ) HSP 1 Score: 56.2 bits (134), Expect = 5.9e-08 Identity = 29/56 (51.79%), Postives = 36/56 (64.29%), Query Frame = 0
BLAST of Lcy02g016590 vs. TAIR 10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein ) HSP 1 Score: 46.2 bits (108), Expect = 6.1e-05 Identity = 22/48 (45.83%), Postives = 31/48 (64.58%), Query Frame = 0
HSP 2 Score: 35.0 bits (79), Expect = 1.4e-01 Identity = 23/64 (35.94%), Postives = 32/64 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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