Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTATTGTAATATGGAGTGAATGCTAGGGAGAAAGGTGTGCAATGTTGATACCTAAATTTAGAGTTTTGGCCACCCACTTTCTCTCTTTTAATTGCATGTAGCTAGCTCAACCACTCTCTCTTCTCTTGCACAAATTATGTTTCCCTTTTAGACACATCCTCTCCTTATAAATATCTCTTCATTCTCTCCTTCCTTTTCACTTCAAGCATTTACAAATGGCTTCTCATAAACTTTCATCTCTTGTGTTCTTTCTCTTATTGGTTGTTGGAGTTTCTTCTGCAGCCAGAGGTCTGTTAACTTATGATGAAGGAGAAGCTGCCTATGGTGGTAGAGCAAGATATGGAGGATACAGTGGAAATGGTGTATATGGACAGTATGGTGAAGAACATGGAGCAGACTATGACAAAGGTAGAGGTGATGAATATGGTGGTGGCAAAGAAACAAACTACGGTCAAGGAGGAGAGCATGACAAAGGTTATAAAAGCAGAGAAGAATACGGTCAAGGAGGAGAGCATGACAAAAATCATAGAAGCCGAGTAGAATACGGTCAAGGAAGAGAGCATGACAAAGGTTATAGAAGCAGAGAGGAATACGGTCAAGGAGGAGAGCATGACAAAGGTTATAGAAGCAGAGAGGAATACGGTCAAGGCGGAGAGCATGGGAAAGGTTATAGAAGCAGAGAAGAATACGGTCAAGGCGGAGAACATGACAAAGGTTATAGAAGCAAAGTAGAATACTGTCAAGGAGGAGAGCATGACAAAGGTTATAGAAGCAAAGATGAATACGGTCAAGGAGAAGAGCATGACAAAGGTTATGGAAGCAGGGAGGAATACGGTCAAGGAGGAGAGCATGACAAAGGTTATGGAAGCAGGGAGGAATACGGTCAAGGAGGAGAGCATGACAAAGGTTATGGAAGCAGAGAAGAATACGGTCGAGGAGAGTATGACAAAGGTTATAGAAGCAAAGTAGAATACGGTCAAGGAGGAGAGCATGACAATAGTTATAGAAGTGGAGGATGTGGTGGAAGAGCAGGATACGATCAAGAAGGCGAGCATGGCAATGGTTATGGAAGTAGATCTGATGAGAAATATGGTGGAAGAGTAGGATACAGTGAAGGAGGAGAGAGTGATAACAGTTATGAAGGATATGATGGAGGAAGCAGTGACAAAGATGGAGGAAGTGCACATGGTAGTTATGAAGGAGGCAATAATGAATATGGTGTTGACCATGGTGGATATGCACCTTGAGAAACACCACCTCAACATTGCCATATATATATGTATATTATATACTATAAGAAAGAAATAAAAAAAAAGAGCATGTCCACGTGTGTATATATATATAGACACGTGTGTGTGAGCTTTTATCCTCCTTTCCCTTTTAAGTATTGAGAAGAAATTATATAAAAAAAAAATTGGGGAAAGAGGAAAATGAAAAAATATATTGTAAGAAAACGTGAGGTTGAAGTGGGAGGCTCTTGTACCTTCTCTTCAAATATATATAAATAAAATAATTGTTTTTCTCTTATTTGGACAAA
mRNA sequence
ATTATTGTAATATGGAGTGAATGCTAGGGAGAAAGGTGTGCAATGTTGATACCTAAATTTAGAGTTTTGGCCACCCACTTTCTCTCTTTTAATTGCATGTAGCTAGCTCAACCACTCTCTCTTCTCTTGCACAAATTATGTTTCCCTTTTAGACACATCCTCTCCTTATAAATATCTCTTCATTCTCTCCTTCCTTTTCACTTCAAGCATTTACAAATGGCTTCTCATAAACTTTCATCTCTTGTGTTCTTTCTCTTATTGGTTGTTGGAGTTTCTTCTGCAGCCAGAGGTCTGTTAACTTATGATGAAGGAGAAGCTGCCTATGGTGGTAGAGCAAGATATGGAGGATACAGTGGAAATGGTGTATATGGACAGTATGGTGAAGAACATGGAGCAGACTATGACAAAGGTAGAGGTGATGAATATGGTGGTGGCAAAGAAACAAACTACGGTCAAGGAGGAGAGCATGACAAAGGTTATAAAAGCAGAGAAGAATACGGTCAAGGAGGAGAGCATGACAAAAATCATAGAAGCCGAGTAGAATACGGTCAAGGAAGAGAGCATGACAAAGGTTATAGAAGCAGAGAGGAATACGGTCAAGGCGGAGAGCATGGGAAAGGTTATAGAAGCAGAGAAGAATACGGTCAAGGCGGAGAACATGACAAAGGTTATAGAAGCAAAGTAGAATACTGTCAAGGAGGAGAGCATGACAAAGGTTATAGAAGCAAAGATGAATACGGTCAAGGAGAAGAGCATGACAAAGGTTATGGAAGCAGGGAGGAATACGGTCAAGGAGGAGAGCATGACAAAGGTTATGGAAGCAGGGAGGAATACGGTCAAGGAGGAGAGCATGACAAAGGTTATGGAAGCAGAGAAGAATACGGTCGAGGAGAGTATGACAAAGGTTATAGAAGCAAAGTAGAATACGGTCAAGGAGGAGAGCATGACAATAGTTATAGAAGTGGAGGATGTGGTGGAAGAGCAGGATACGATCAAGAAGGCGAGCATGGCAATGGTTATGGAAGTAGATCTGATGAGAAATATGGTGGAAGAGTAGGATACAGTGAAGGAGGAGAGAGTGATAACAGTTATGAAGGATATGATGGAGGAAGCAGTGACAAAGATGGAGGAAGTGCACATGGTAGTTATGAAGGAGGCAATAATGAATATGGTGTTGACCATGGTGGATATGCACCTTGAGAAACACCACCTCAACATTGCCATATATATATGTATATTATATACTATAAGAAAGAAATAAAAAAAAAGAGCATGTCCACGTGTGTATATATATATAGACACGTGTGTGTGAGCTTTTATCCTCCTTTCCCTTTTAAGTATTGAGAAGAAATTATATAAAAAAAAAATTGGGGAAAGAGGAAAATGAAAAAATATATTGTAAGAAAACGTGAGGTTGAAGTGGGAGGCTCTTGTACCTTCTCTTCAAATATATATAAATAAAATAATTGTTTTTCTCTTATTTGGACAAA
Coding sequence (CDS)
ATGGCTTCTCATAAACTTTCATCTCTTGTGTTCTTTCTCTTATTGGTTGTTGGAGTTTCTTCTGCAGCCAGAGGTCTGTTAACTTATGATGAAGGAGAAGCTGCCTATGGTGGTAGAGCAAGATATGGAGGATACAGTGGAAATGGTGTATATGGACAGTATGGTGAAGAACATGGAGCAGACTATGACAAAGGTAGAGGTGATGAATATGGTGGTGGCAAAGAAACAAACTACGGTCAAGGAGGAGAGCATGACAAAGGTTATAAAAGCAGAGAAGAATACGGTCAAGGAGGAGAGCATGACAAAAATCATAGAAGCCGAGTAGAATACGGTCAAGGAAGAGAGCATGACAAAGGTTATAGAAGCAGAGAGGAATACGGTCAAGGCGGAGAGCATGGGAAAGGTTATAGAAGCAGAGAAGAATACGGTCAAGGCGGAGAACATGACAAAGGTTATAGAAGCAAAGTAGAATACTGTCAAGGAGGAGAGCATGACAAAGGTTATAGAAGCAAAGATGAATACGGTCAAGGAGAAGAGCATGACAAAGGTTATGGAAGCAGGGAGGAATACGGTCAAGGAGGAGAGCATGACAAAGGTTATGGAAGCAGGGAGGAATACGGTCAAGGAGGAGAGCATGACAAAGGTTATGGAAGCAGAGAAGAATACGGTCGAGGAGAGTATGACAAAGGTTATAGAAGCAAAGTAGAATACGGTCAAGGAGGAGAGCATGACAATAGTTATAGAAGTGGAGGATGTGGTGGAAGAGCAGGATACGATCAAGAAGGCGAGCATGGCAATGGTTATGGAAGTAGATCTGATGAGAAATATGGTGGAAGAGTAGGATACAGTGAAGGAGGAGAGAGTGATAACAGTTATGAAGGATATGATGGAGGAAGCAGTGACAAAGATGGAGGAAGTGCACATGGTAGTTATGAAGGAGGCAATAATGAATATGGTGTTGACCATGGTGGATATGCACCTTGA
Protein sequence
MASHKLSSLVFFLLLVVGVSSAARGLLTYDEGEAAYGGRARYGGYSGNGVYGQYGEEHGADYDKGRGDEYGGGKETNYGQGGEHDKGYKSREEYGQGGEHDKNHRSRVEYGQGREHDKGYRSREEYGQGGEHGKGYRSREEYGQGGEHDKGYRSKVEYCQGGEHDKGYRSKDEYGQGEEHDKGYGSREEYGQGGEHDKGYGSREEYGQGGEHDKGYGSREEYGRGEYDKGYRSKVEYGQGGEHDNSYRSGGCGGRAGYDQEGEHGNGYGSRSDEKYGGRVGYSEGGESDNSYEGYDGGSSDKDGGSAHGSYEGGNNEYGVDHGGYAP
Homology
BLAST of Lcy02g016510 vs. ExPASy Swiss-Prot
Match:
P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)
HSP 1 Score: 68.2 bits (165), Expect = 2.0e-10
Identity = 129/346 (37.28%), Postives = 149/346 (43.06%), Query Frame = 0
Query: 4 HKLSSLVFFLLLVVGVSSAARGLLTYDEG-------EAAYGGRARY---GGYSGNGVYGQ 63
H+L SLVF +LL +GV SA R LLT D G YGG A GG G+G G
Sbjct: 5 HRLPSLVFLVLLALGVCSARRALLTLDAGYGLGHGTGGGYGGAAGSYGGGGGGGSGGGGG 64
Query: 64 YGEEHGADYDKGRGDEYGGGKETNYGQGGEHDKGYKSREEYGQGGEHDKNHRSRVEYGQG 123
Y EHG G G GGG+ G GG+ GY G GG V YG G
Sbjct: 65 YAGEHGV---VGYGGGSGGGQGGGVGYGGDQGAGYGGGGGSGGGG--------GVAYGGG 124
Query: 124 REH-----DKGYRSREEYGQGGEHGKGYRSREEYGQGGEHDKGYRSKVEYCQGGEHDKGY 183
E +G + YG GGEHG GY G GG GY + QGG + G
Sbjct: 125 GERGGYGGGQGGGAGGGYGAGGEHGIGYGGGGGSGAGG--GGGYNA--GGAQGGGYGTGG 184
Query: 184 RSKDEYGQGEEHDKGYGSRE--------EYGQGGEHDKGYGSREEYGQGGEHDKGYGSRE 243
+ G G +H GYG + YG GGEH G G GQGG GYG+
Sbjct: 185 GAGGGGGGGGDHGGGYGGGQGAGGGAGGGYGGGGEHGGGGGG----GQGGGAGGGYGAGG 244
Query: 244 EYGRGE-YDKGYRSKVEYGQGGEHDNSYRSG-GCGGRAGYDQEGEHGNGYGSRSDEKYGG 303
E+G G +G + YG GGEH G G G GY GEHG G G GG
Sbjct: 245 EHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGG 304
Query: 304 RVGYSEGGESDNSYEGYDGGSSDKDGGSAHGSYEGGNNEYGVDHGG 325
GY GGE + GG+ GG A G Y G E+G GG
Sbjct: 305 --GYGAGGE-------HGGGAGGGQGGGAGGGY-GAGGEHGGGGGG 321
BLAST of Lcy02g016510 vs. ExPASy TrEMBL
Match:
A0A7I8LNX6 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_18021696 PE=4 SV=1)
HSP 1 Score: 104.8 bits (260), Expect = 7.2e-19
Identity = 152/383 (39.69%), Postives = 161/383 (42.04%), Query Frame = 0
Query: 25 GLLTYDEGEAAYGGRARYGGYSGNGVYGQYGEEHGADYDKGRGDEYGGGKETNYGQGGEH 84
G + E E +GG GG SG G G EHG+ Y G G GGG YG GGEH
Sbjct: 128 GYGNWGEHEVGHGGGG--GGGSGGGSGYGAGGEHGSGYGSGTGS--GGG--AGYGAGGEH 187
Query: 85 DKGYKS------REEYGQGGEHDKNHRS------RVEYGQGREHDKGYRS------REEY 144
GY S YG GGEH + S YG G EH GY S Y
Sbjct: 188 GGGYGSGTGSGGGAAYGAGGEHGSGYGSGTGSGGGAGYGAGGEHGGGYGSGTGSGGGAGY 247
Query: 145 GQGGEHGKGYRS------REEYGQGGEHDKGYRS------KVEYCQGGEHDKGYRSKD-- 204
G GGEHG GY S YG GGEH GY S Y GGEH GY S
Sbjct: 248 GAGGEHGGGYGSGTGSGGGAGYGAGGEHGGGYGSGTGSGGGTAYGAGGEHGGGYGSGTGS 307
Query: 205 ----EYGQGEEHDKGYGS------REEYGQGGEHDKGYGS------REEYGQGGEHDKGY 264
YG G EH GYGS YG GGEH GYGS YG GGEH GY
Sbjct: 308 GGGAGYGAGGEHGGGYGSGTGSGGGAGYGAGGEHGGGYGSGTGSGGGAGYGAGGEHGGGY 367
Query: 265 GSREEYG-------RGEYDKGYRS------KVEYGQGGEHDNSYRSG-GCGGRAGYDQEG 324
GS G GE+ GY S YG GGEH Y SG G GG AGY G
Sbjct: 368 GSGTGSGGGTAYVAGGEHGGGYGSGSGSGGGAGYGAGGEHGGGYGSGAGSGGGAGYGAGG 427
BLAST of Lcy02g016510 vs. ExPASy TrEMBL
Match:
F6HT88 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g01350 PE=4 SV=1)
HSP 1 Score: 102.4 bits (254), Expect = 3.6e-18
Identity = 148/375 (39.47%), Postives = 162/375 (43.20%), Query Frame = 0
Query: 1 MASHKLSSLVFFLLLVVGVSSAARGLLTYDEGEAAY------GGRARYGGYSGNGVYGQY 60
MA+H+ S VFF+LL +G+ SA R LLT+ EGEA Y GG G SG G G Y
Sbjct: 88 MATHRAVSAVFFVLLSIGICSATRALLTF-EGEAGYGTGHGIGGGGGGGSGSGGGFPGGY 147
Query: 61 GEEHGA----------DYDKGRGDEYGGGKETNYGQGGEHDKGYKSRE------EYGQGG 120
G G+ Y G G GGG YG GG H GY S YG GG
Sbjct: 148 GGGGGSGGGGGYGAVGGYGSGGGGGGGGGSGGGYGAGGIHGGGYGSGGGSGGGIGYGAGG 207
Query: 121 EHDKNHRS------RVEYGQGREHD----KGYRSREEYGQGGEHGKGYRSREEYGQGGEH 180
EH S V YG G GY + E+G G G G YG GGEH
Sbjct: 208 EHGGGGGSGGGAGGGVGYGSGGGGSGGAGGGYPAGPEHGGGYGSGGGQGGGAGYGGGGEH 267
Query: 181 DKGY------RSKVEYCQGGEHDKGYRSKDEYGQGEEHDKGYGSREEYGQGGEHDKGYGS 240
GY V Y GGEH GY + + G G G G YG GGEH GYGS
Sbjct: 268 GGGYGGGSGGGGGVGYGAGGEHGGGYGTGE--GAGGGGGGGSGGGTGYGAGGEHGGGYGS 327
Query: 241 ------REEYGQGGEHDKGYGSREEYGRGEYDKGYRSKVEYGQGGEHDNSYRS-GGCGGR 300
YG GGEH GYG G G YG GG+H Y S GG GG
Sbjct: 328 GGGSGGGTGYGAGGEHGGGYGGGGGSGGG---------TGYGDGGDHGAGYGSGGGSGGG 387
Query: 301 AGYDQEGEHGNGYGSRSDEKYGGRVGYSEGGESDNSY---EGYDGGSSDKDGGSAHGSYE 328
GY GEHG GYG + GG VGY GGE Y G GG+ GG G Y
Sbjct: 388 IGYGAGGEHGGGYGGGNGG--GGGVGYGAGGEHGGGYGRGGGSGGGAGAGSGGGGGGGYG 446
BLAST of Lcy02g016510 vs. ExPASy TrEMBL
Match:
A0A7I8JVI9 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_18020197 PE=4 SV=1)
HSP 1 Score: 94.7 bits (234), Expect = 7.4e-16
Identity = 154/412 (37.38%), Postives = 170/412 (41.26%), Query Frame = 0
Query: 1 MASHKLSSLVFFLLLVVGVSSAARGLLTYDEGEAAYGGRARYGGYSGNGVYGQYGEEHGA 60
MAS ++ F +LL +A R L T++ E+AYG G+ G YG +G GA
Sbjct: 1 MASLRVLGAAFLVLLGAHFCAAGRSLFTFE--ESAYG-----AGHGTGGAYGSWGGAAGA 60
Query: 61 DY----------DKGRGDEYGGGKE---TNYGQGGEHDKGY-----KSREEYGQGGEHDK 120
G G YG G + YG GEH+ G+ YG GGEH
Sbjct: 61 TAVAVVLGPGMGSSGGGAGYGAGGQGGHAGYGNWGEHEVGHGGGGGGGSAGYGAGGEHGG 120
Query: 121 NHRS------RVEYGQGREHDKGYRSREE-----YGQGGEHGKGYRS------REEYGQG 180
+ S YG G EH G YG GGEHG GY S YG G
Sbjct: 121 GYGSGTGSGGGAAYGAGGEHGSGGSGTGSGGGAGYGAGGEHGGGYGSGTGSGGGAGYGAG 180
Query: 181 GEHDKGYRS------KVEYCQGGEHDKGYRS------KDEYGQGEEHDKGYGS------R 240
GEH GY S Y GGEH GY S YG G EH GYGS
Sbjct: 181 GEHGGGYGSGTGSGGGAGYGAGGEHGGGYGSGTGSGGGTAYGAGGEHGGGYGSGTGSGGG 240
Query: 241 EEYGQGGEHDKGYGS------REEYGQGGEHDKGYGSREEYG-------RGEYDKGYRS- 300
YG GGEH GYGS YG GGEH GYGS G GE+ GY S
Sbjct: 241 AGYGAGGEHGGGYGSGTGSGGGAGYGAGGEHGGGYGSGTGSGGGTAYVAGGEHGGGYGSG 300
Query: 301 -----KVEYGQGGEHDNSYRSG-GCGGRAGYDQEGEHGNGYGSRSDEKYGGRVGYSEGGE 326
YG GGEH Y SG G GG AGY GEHG GYGS + GG GY GGE
Sbjct: 301 TGSGGGAGYGAGGEHGGGYGSGAGSGGGAGYGAGGEHGGGYGSGTGS--GGGAGYGAGGE 360
BLAST of Lcy02g016510 vs. ExPASy TrEMBL
Match:
A0A1U7Z2K7 (glycine-rich cell wall structural protein 1.8-like OS=Nelumbo nucifera OX=4432 GN=LOC104585613 PE=4 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 2.8e-15
Identity = 134/361 (37.12%), Postives = 157/361 (43.49%), Query Frame = 0
Query: 1 MASHKLSSLVFFLLLVVGVSSAARGLLTYDEGE----------------------AAYGG 60
MA+ ++ S++FF+LL VG+ SAAR LLT++EG A YGG
Sbjct: 1 MATCRIFSVIFFVLLCVGICSAARALLTFEEGTGYPGYGNGHGIGGGLGYGGGGGAGYGG 60
Query: 61 --RARYGGYSGNGVYGQYGE---EHG-ADYDKGRGDEYGGGKETNYGQGGEHDKGYKSRE 120
YGG G+G YG EHG Y G G GGG YG GGEH G
Sbjct: 61 GVPGGYGGGGGSGSGAGYGAGVGEHGFPGYGVGYGSGGGGGGGAGYGAGGEHGGG----- 120
Query: 121 EYGQGGEHDKNHRSRVEYGQGREHDKGYRSREEYGQGGEHGKGYRSREEYGQGGEHDKGY 180
YG GG YG G EH GY S G G G GY + EE+G G G
Sbjct: 121 -YGGGGGGGSGGGGGAGYGAGEEHGAGYGS----GSGSGGGIGYGAGEEHGAGYGSGSGS 180
Query: 181 RSKVEYCQGGEHDKGYRSKDEYGQGEEHDKGYGSREEYGQGGEHDKGYGSREEYGQGGEH 240
+ Y GGEH G+ G G GYG+ E G G G G YG GGEH
Sbjct: 181 GGGIGYGAGGEHGGGHGG----GGGSGGGVGYGAGGEGGAGYGSGSGSGGGIGYGAGGEH 240
Query: 241 DKGY------GSREEYGRGEYDKGYRSKV-EYGQGGEHDNSYRSG-GCGGRAGYDQEGEH 300
GY G YG G GY Y G EH + Y SG G GG GY GE+
Sbjct: 241 GGGYGGGGGSGGGVGYGAGGEHGGYIPYYGGYSGGAEHGSGYGSGSGSGGGGGYGAGGEN 300
Query: 301 GNGYGSRSDEKYGGRVGYSEGGESDNSYEGYDGGSSDKDGGSAHGSYEGGNNEYGVDHGG 326
G GYG GG GY GGE + Y G S GG+ +G+ GG + G + GG
Sbjct: 301 GGGYGGGGGS--GGGSGYGAGGEHGSGY----GSGSGNGGGAGYGAGGGGEHGGGYNSGG 341
BLAST of Lcy02g016510 vs. ExPASy TrEMBL
Match:
A0A6N2K763 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS35688 PE=4 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 2.4e-14
Identity = 136/355 (38.31%), Postives = 152/355 (42.82%), Query Frame = 0
Query: 1 MASHKLSSLVFFLLLVVGVSSAARGLLTYDE-----------------GEAAYGGRARYG 60
M ++K+ S VFF LL +G+ +A R LL +E G + YGG G
Sbjct: 1 MGTYKVLSSVFFALLGLGICTATRALLNLEEIPGHIPVVGYGSGHGAGGGSGYGG-GGVG 60
Query: 61 GY-----SGNGVYGQYGE--EHGADYDKGRGDEYGGGKETNYGQGGEHDKGYKSREEYGQ 120
GY SG G G YG EHGA Y G G+ GGG YG GGEH GY G+
Sbjct: 61 GYGGGGGSGGGGGGGYGAVGEHGAGYGGGGGE--GGG--AGYGGGGEHGAGYGGGGGSGE 120
Query: 121 GGEHDKNHRSRVEYGQGREHDKGYRSREEYGQGGEHGKGYRSREEYGQGGEHDKGYRSKV 180
GG + G G G YG GGEHG G YG GG GY +
Sbjct: 121 GGGSGYGAAA----GHGGGGGSGGGGGAGYGAGGEHGAG------YGSGGGGGAGYGAGG 180
Query: 181 EYCQGGEHDKGYRSKDEYGQGEEHDKGYGSREEYGQGGEHDKGYGS----REEYGQGGEH 240
E+ GG G + YG G G G YG GGEH GYGS YG GGEH
Sbjct: 181 EH--GGGGGSGGGAGAGYGAGGGGGSGGGGGAGYGAGGEHGAGYGSGGGGGAGYGAGGEH 240
Query: 241 DKGYGSREEYGRGEYDKGYRSKVEYGQGGEHDNSYRSGGCGGRAGYDQEGEHGNGYGSRS 300
GYGS G G YG GGEH SGG GG AGY GEHG GYGS
Sbjct: 241 GAGYGSGGGAGAG-----------YGAGGEHGGGGGSGG-GGGAGYGAGGEHGAGYGSGG 300
Query: 301 DEKYGGRVGYSEGGESDNSYEGYDGGSSDKDGGSAHGSYEGGNNEYGVDHGGYAP 328
GG GY GGE Y GG + G+ HG GGYAP
Sbjct: 301 ----GGGAGYGAGGEHGAGYGSGGGGGAGYGAGAGHG-------------GGYAP 309
BLAST of Lcy02g016510 vs. NCBI nr
Match:
XP_028224753.1 (glycine-rich cell wall structural protein 1.8-like [Glycine soja] >KAG5059143.1 hypothetical protein JHK87_000172 [Glycine soja] >KAG5087552.1 hypothetical protein JHK86_000164 [Glycine max] >RZC28032.1 hypothetical protein D0Y65_000178 [Glycine soja])
HSP 1 Score: 107.1 bits (266), Expect = 3.0e-19
Identity = 143/357 (40.06%), Postives = 162/357 (45.38%), Query Frame = 0
Query: 1 MAS-HKLSSLVFFLLLVVGVSSAARGLLT----YDEGEAAYGGRARYGGYSGNGVYG--Q 60
MAS H+L+S++FFLLL +G+SSA R LLT Y G GG YGG SG G G
Sbjct: 1 MASIHRLNSVLFFLLLALGISSARRALLTLDGGYGVGPGIGGGYGGYGGGSGGGQGGGVG 60
Query: 61 YGEEHGADYDKGRGDEYGGGKETNYGQGGEH--------DKGYKSREEYGQGGEHDKNHR 120
YG +HG Y G G GGG YG G EH KG + YG GGEH
Sbjct: 61 YGGDHGTGYGGGGGGGSGGG--AGYGGGVEHGGGGGYGGGKGGGAGGGYGAGGEHG---- 120
Query: 121 SRVEYGQGREHDKGYRSREEYGQGGEHGKGYRS----REEYGQGGEHDKGYRSKVEYCQG 180
+ YG G G YG+GG H GY S + G GGEH GY G
Sbjct: 121 --IGYGGGGGSGAGGGGAGGYGEGGAHSGGYGSGGGAGDGGGAGGEHGGGY--------G 180
Query: 181 GEHDKGYRSKDEYGQGEEHDKGYGSRE------EYGQGGEHDKGYGSREEYGQGGEHDKG 240
G G + YG G H GYG + YG GGEH GYG E G GG G
Sbjct: 181 GGQGGGVGAGGGYGDGGAHGGGYGGGQGGGAGGGYGAGGEHGGGYGGGEGGGAGG----G 240
Query: 241 YGSREEYGRG-EYDKGYRSKVEYGQGGEHDNSYRSGGCGGRA--GYDQEGEHGNGYGSRS 300
YG+ E+G G +G S YG GG+H + GG GG A GY GEHG GYG
Sbjct: 241 YGASGEHGGGYGGGQGGGSGGGYGAGGDHGAAGYGGGAGGGAGGGYGAGGEHGIGYGGGG 300
Query: 301 DEKYGGRVGYSEGGESDNSYEG--YDGGSSDKDGGSAHGSYEGGNNEYGVDHGGYAP 328
G GY +GG Y G GG G AHG GG G HGGY P
Sbjct: 301 GSGGGSGGGYGDGGAHGGGYGGGAGAGGGGGYGAGGAHGGGFGGGGGSGGGHGGYVP 337
BLAST of Lcy02g016510 vs. NCBI nr
Match:
CAA7411018.1 (unnamed protein product [Spirodela intermedia])
HSP 1 Score: 104.8 bits (260), Expect = 1.5e-18
Identity = 152/383 (39.69%), Postives = 161/383 (42.04%), Query Frame = 0
Query: 25 GLLTYDEGEAAYGGRARYGGYSGNGVYGQYGEEHGADYDKGRGDEYGGGKETNYGQGGEH 84
G + E E +GG GG SG G G EHG+ Y G G GGG YG GGEH
Sbjct: 128 GYGNWGEHEVGHGGGG--GGGSGGGSGYGAGGEHGSGYGSGTGS--GGG--AGYGAGGEH 187
Query: 85 DKGYKS------REEYGQGGEHDKNHRS------RVEYGQGREHDKGYRS------REEY 144
GY S YG GGEH + S YG G EH GY S Y
Sbjct: 188 GGGYGSGTGSGGGAAYGAGGEHGSGYGSGTGSGGGAGYGAGGEHGGGYGSGTGSGGGAGY 247
Query: 145 GQGGEHGKGYRS------REEYGQGGEHDKGYRS------KVEYCQGGEHDKGYRSKD-- 204
G GGEHG GY S YG GGEH GY S Y GGEH GY S
Sbjct: 248 GAGGEHGGGYGSGTGSGGGAGYGAGGEHGGGYGSGTGSGGGTAYGAGGEHGGGYGSGTGS 307
Query: 205 ----EYGQGEEHDKGYGS------REEYGQGGEHDKGYGS------REEYGQGGEHDKGY 264
YG G EH GYGS YG GGEH GYGS YG GGEH GY
Sbjct: 308 GGGAGYGAGGEHGGGYGSGTGSGGGAGYGAGGEHGGGYGSGTGSGGGAGYGAGGEHGGGY 367
Query: 265 GSREEYG-------RGEYDKGYRS------KVEYGQGGEHDNSYRSG-GCGGRAGYDQEG 324
GS G GE+ GY S YG GGEH Y SG G GG AGY G
Sbjct: 368 GSGTGSGGGTAYVAGGEHGGGYGSGSGSGGGAGYGAGGEHGGGYGSGAGSGGGAGYGAGG 427
BLAST of Lcy02g016510 vs. NCBI nr
Match:
XP_034704421.1 (glycine-rich cell wall structural protein 1.8-like isoform X2 [Vitis riparia])
HSP 1 Score: 104.8 bits (260), Expect = 1.5e-18
Identity = 151/397 (38.04%), Postives = 166/397 (41.81%), Query Frame = 0
Query: 1 MASHKLSSLVFFLLLVVGVSSAARGLLTYDEGEAAY-----------------------G 60
MA+H+ S VFF+LL +G+ SA R LLT+ EGEA Y G
Sbjct: 1 MATHRAVSAVFFVLLSIGICSATRALLTF-EGEAGYGTGHGIGGGGGGGSGSGGGGGFPG 60
Query: 61 GRARYGGYSGNGVYGQYGEEHGADYDKGRGDEYGGGKETNYGQGGEHDKGYKSRE----- 120
G GG G G YG G +G+ G G GGG YG GG H GY S
Sbjct: 61 GYGGGGGSGGGGGYGAVG-GYGSGGGGGGGGGSGGGSGGGYGAGGIHGGGYGSGGGSGGG 120
Query: 121 -EYGQGGEHDKNHRS------RVEYGQG----REHDKGYRSREEYGQGGEHGKGYRSREE 180
YG GGEH S V YG G GY + E+G G G G
Sbjct: 121 IGYGAGGEHGGGGGSGGGAGGGVGYGSGGGGSGGSGGGYPAGPEHGGGSGSGGGQGGGAG 180
Query: 181 YGQGGEHDKGY------RSKVEYCQGGEHDKGYRSKD---------EYGQGEEHDKGY-- 240
YG GGEH GY V Y GGEH GY + + YG G EH GY
Sbjct: 181 YGGGGEHGGGYGGGSGGGGGVGYGAGGEHGGGYGTGEGAGGGGGSAGYGPGIEHGGGYGG 240
Query: 241 ----GSREEYGQGGEHDKGYGS------REEYGQGGEHDKGYGSREEYGRGEYDKGYRSK 300
G YG GGEH GYGS YG GGEH GYG G G
Sbjct: 241 GGGSGGGTGYGAGGEHGGGYGSGGGSGGGTGYGAGGEHGGGYGGGGGSGGG--------- 300
Query: 301 VEYGQGGEHDNSYRS-GGCGGRAGYDQEGEHGNGYGSRSDEKYGGRVGYSEGGESDNSY- 328
YG GG+H Y S GG GG GY GEHG GYG + GG VGY GGE Y
Sbjct: 301 TGYGAGGDHGAGYGSGGGSGGGIGYGAGGEHGGGYGGGNGGGGGGGVGYGAGGEHGGGYG 360
BLAST of Lcy02g016510 vs. NCBI nr
Match:
TKY70017.1 (Glycine-rich cell wall structural protein 1.8 [Spatholobus suberectus])
HSP 1 Score: 103.2 bits (256), Expect = 4.3e-18
Identity = 152/400 (38.00%), Postives = 169/400 (42.25%), Query Frame = 0
Query: 1 MASHKLSSLVFFLLLVVGVSSAARGLLTYD-EGEAAYGGRA-RYGGYSGNGVYGQYGEEH 60
MA H+L S+VF +LL +G+ SA R LLT D G GG A YGG SG G G YG EH
Sbjct: 82 MAIHRLPSVVFLVLLALGICSARRALLTLDGVGHGIGGGVAGGYGGGSGGG--GGYGGEH 141
Query: 61 ---------------GADYDKGRGDEYGGGKETNYGQGGEHDKGY------KSREEYGQG 120
G Y G G GGG YG G EH GY + +G G
Sbjct: 142 RVVGYGGGSGGGQGGGVGYGGGGGGS-GGGSGAGYGGGVEHSGGYGGGGGGGTGGGFGAG 201
Query: 121 GEHDKNH----------RSRVEYGQGREHDKGYRSREEY----GQGGEHGKGYRSRE--- 180
GEH + V YG+G H GY S G GGEHG GY +
Sbjct: 202 GEHGIGYGGGGGSGGGGGGGVGYGEGGTHGGGYGSGGGAGGGGGAGGEHGGGYGGGQGGG 261
Query: 181 ---EYGQGGEHDKGY------RSKVEYCQGGEHDKGY--------RSKDEYGQGEEHDKG 240
YG GGEH GY + Y GGEH GY + YG G EH G
Sbjct: 262 AGGGYGNGGEHGGGYGGGQGGGAGGGYGNGGEHGGGYGGGQGGGGGAGGGYGNGGEHGGG 321
Query: 241 YGSRE------EYGQGGEHDKGYGSRE------EYGQGGEHDKGYGSREEYGRGEYDKGY 300
YG + YG GGEH GYG + YG GGEH GYG + G G
Sbjct: 322 YGGGQGGGAGGGYGAGGEHGGGYGGGQGGGAGGGYGNGGEHGGGYGGGQGGGGGG----- 381
Query: 301 RSKVEYGQGGEHDNSYRSGGCGGRA--GYDQEGEHGNGYGSRSDEKYGGRVGYSEGGESD 328
YG GGEH + GG GG A GY GEHG GYG GG GY +GG
Sbjct: 382 ----GYGGGGEHGAAGYGGGEGGGAGGGYGAGGEHGIGYGGGGGSGSGGGGGYGDGGAHG 441
BLAST of Lcy02g016510 vs. NCBI nr
Match:
XP_002278025.2 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Vitis vinifera])
HSP 1 Score: 102.4 bits (254), Expect = 7.3e-18
Identity = 148/375 (39.47%), Postives = 162/375 (43.20%), Query Frame = 0
Query: 1 MASHKLSSLVFFLLLVVGVSSAARGLLTYDEGEAAY------GGRARYGGYSGNGVYGQY 60
MA+H+ S VFF+LL +G+ SA R LLT+ EGEA Y GG G SG G G Y
Sbjct: 1 MATHRAVSAVFFVLLSIGICSATRALLTF-EGEAGYGTGHGIGGGGGGGSGSGGGFPGGY 60
Query: 61 GEEHGA----------DYDKGRGDEYGGGKETNYGQGGEHDKGYKSRE------EYGQGG 120
G G+ Y G G GGG YG GG H GY S YG GG
Sbjct: 61 GGGGGSGGGGGYGAVGGYGSGGGGGGGGGSGGGYGAGGIHGGGYGSGGGSGGGIGYGAGG 120
Query: 121 EHDKNHRS------RVEYGQGREHD----KGYRSREEYGQGGEHGKGYRSREEYGQGGEH 180
EH S V YG G GY + E+G G G G YG GGEH
Sbjct: 121 EHGGGGGSGGGAGGGVGYGSGGGGSGGAGGGYPAGPEHGGGYGSGGGQGGGAGYGGGGEH 180
Query: 181 DKGY------RSKVEYCQGGEHDKGYRSKDEYGQGEEHDKGYGSREEYGQGGEHDKGYGS 240
GY V Y GGEH GY + + G G G G YG GGEH GYGS
Sbjct: 181 GGGYGGGSGGGGGVGYGAGGEHGGGYGTGE--GAGGGGGGGSGGGTGYGAGGEHGGGYGS 240
Query: 241 ------REEYGQGGEHDKGYGSREEYGRGEYDKGYRSKVEYGQGGEHDNSYRS-GGCGGR 300
YG GGEH GYG G G YG GG+H Y S GG GG
Sbjct: 241 GGGSGGGTGYGAGGEHGGGYGGGGGSGGG---------TGYGDGGDHGAGYGSGGGSGGG 300
Query: 301 AGYDQEGEHGNGYGSRSDEKYGGRVGYSEGGESDNSY---EGYDGGSSDKDGGSAHGSYE 328
GY GEHG GYG + GG VGY GGE Y G GG+ GG G Y
Sbjct: 301 IGYGAGGEHGGGYGGGNGG--GGGVGYGAGGEHGGGYGRGGGSGGGAGAGSGGGGGGGYG 359
BLAST of Lcy02g016510 vs. TAIR 10
Match:
AT3G07030.1 (Alba DNA/RNA-binding protein )
HSP 1 Score: 48.5 bits (114), Expect = 1.2e-05
Identity = 62/166 (37.35%), Postives = 74/166 (44.58%), Query Frame = 0
Query: 167 GYRSKDEYGQGEEHDKGYGSREEYGQGGEHDKGYGSREEYGQGGEHDKGYGSREEYGRGE 226
GY + G G D GYG R G G + YG + G GG D GYG G G
Sbjct: 218 GYGGGRDGGYGGGRDDGYGERRNDGYGERRNDRYGGGRDDGYGGGRDDGYGGGRNDGYGG 277
Query: 227 YDKGYRSKVEYGQGGEHDNSYRSGGCGGRAGY-DQEGEHGNGYGSRSDEKYGGRVGYSEG 286
G+R G+GG D Y GGR GY + G G+GYG + YGG G G
Sbjct: 278 RRGGFRG----GRGGGRDEGYG----GGRGGYGGRSGGQGDGYGGGRGDGYGGGRGDGYG 337
Query: 287 GESDNSYEG-----YDGGSSDKDGGSAHGSYEGGNNE-YGVDHGGY 326
G + Y G YDGG D GG + Y GG ++ YG GGY
Sbjct: 338 GGRGDGYGGGRVDRYDGGRRDGYGGGRYDGYGGGKSDGYGGGRGGY 375
BLAST of Lcy02g016510 vs. TAIR 10
Match:
AT5G46730.1 (glycine-rich protein )
HSP 1 Score: 42.4 bits (98), Expect = 8.4e-04
Identity = 123/333 (36.94%), Postives = 135/333 (40.54%), Query Frame = 0
Query: 1 MASHKLSSLVFFLLLVVGVSSA-ARGLLTYDEGEAAYGGRARYGGYSGNGVYGQYGEEHG 60
M S K S VFFL+L V + A +R LL Y G+A+ GG GG SG G YG E G
Sbjct: 1 MVSLKAFSTVFFLILGVSICYATSRNLLNY--GQASGGGGHGGGGGSGGVSSGGYGGESG 60
Query: 61 ADYDKGRGDEYGGGKETNYGQGGEHDKGYKSREEYGQGGEHDKNHRSRVEYGQGREHDKG 120
Y G G+ GGG YG G E GY S G GG G G G
Sbjct: 61 GGYGGGSGEGAGGG----YG-GAE---GYASGGGSGHGGG-----------GGGAASSGG 120
Query: 121 YRSREEYGQGGEHGKGYRSREEYGQGGEHDKGYRSKVEYCQGGEHDKGYRSKDEYGQGEE 180
Y S G GG +G G GG G + Y GGEH GY + G G
Sbjct: 121 YASGAGEGGGGGYGGAAGGHAGGGGGGSGGGGGSA---YGAGGEHASGYGNGAGEG-GGA 180
Query: 181 HDKGYGSREEYGQGGEHDKGYGSREEYGQGGEH-DKGYGSREEYGRGEYDKGYRSKVEYG 240
GYG YG GG H G G GG H GYG E G G + YG
Sbjct: 181 GASGYGG-GAYGGGGGHGGGGGGG---SAGGAHGGSGYGGGEGGGAGG-GGSHGGAGGYG 240
Query: 241 QGGEHDNSYRSGGCGGRAGYDQEGEHGNGYGSRSDEKYGGRVGYSEGGESDNSYEGYDGG 300
GG GG GG Y G HG GYGS GG G GG + Y G GG
Sbjct: 241 GGG-------GGGSGGGGAYGGGGAHGGGYGS------GGGEGGGYGGGAAGGYGGGGGG 290
Query: 301 SSDKDG--GSAHGSYEGGNNEYGVDH--GGYAP 328
G G HG GG + G H GGYAP
Sbjct: 301 GEGGGGSYGGEHGGGSGGGHGGGGGHGGGGYAP 290
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P10496 | 2.0e-10 | 37.28 | Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2... | [more] |
Match Name | E-value | Identity | Description | |
A0A7I8LNX6 | 7.2e-19 | 39.69 | Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_18021696 PE=4 SV... | [more] |
F6HT88 | 3.6e-18 | 39.47 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g01350 PE=4 SV=... | [more] |
A0A7I8JVI9 | 7.4e-16 | 37.38 | Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_18020197 PE=4 SV... | [more] |
A0A1U7Z2K7 | 2.8e-15 | 37.12 | glycine-rich cell wall structural protein 1.8-like OS=Nelumbo nucifera OX=4432 G... | [more] |
A0A6N2K763 | 2.4e-14 | 38.31 | Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS35688 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_028224753.1 | 3.0e-19 | 40.06 | glycine-rich cell wall structural protein 1.8-like [Glycine soja] >KAG5059143.1 ... | [more] |
CAA7411018.1 | 1.5e-18 | 39.69 | unnamed protein product [Spirodela intermedia] | [more] |
XP_034704421.1 | 1.5e-18 | 38.04 | glycine-rich cell wall structural protein 1.8-like isoform X2 [Vitis riparia] | [more] |
TKY70017.1 | 4.3e-18 | 38.00 | Glycine-rich cell wall structural protein 1.8 [Spatholobus suberectus] | [more] |
XP_002278025.2 | 7.3e-18 | 39.47 | PREDICTED: glycine-rich cell wall structural protein 1.8-like [Vitis vinifera] | [more] |