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Lcy02g016470 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGAACGCAACCAATGGCCCATTATTCTTATATTTCCATTTCCTCTTCATGAGTTATGAGTCCTTTCTCAATCTCTCCCAATCTCTCTCTTTCTATAAAATTGTTCATACAAGAATAATTTTAATTTTTGGTTTTAATGAGCATGAATTGCCTAGCATGCCAAGCCCTTCCAAGGACACAATCAGATAGGGAGAATAATAATGATCATGGTTATGAAACCTCCTCCTCTTTGATAGGCAAATCATGTTGCCTAGACGTCACACGGCGGTGGTCGGCCGACCTGACTCCGTCGTCGTACAAACCGATCAAGGCCGACGATGATGATGCTGGCTCTTCTCCTCCTCGTAAGAAGGCAAAGACGACCCGCCTCCGAAGCGACGGCGGTAGGAACGAGCCGAGGTTGGTGAGGAGCTCTGGGATGAGAAGGGATTGGAGCTTTGAGGATTTGAGATTGAGAGATCAAAAGAAAGGGAGATTCCATTGAGGCTCAATTTTTGTTCTTTTTGCTTTTTTCCCCCTCACTAAATGATCTCTCTCTGATTCTCTCCCTCTTTCTCTCATTATGTGTTTGTAATTTGTTGTGTTTATATTTTAAGTTTTTACTGTAAATTATTGGAGTTTGAATAATAATGTTCAAATTTGAGGTGGGAATGAGATTCAT CAAGAACGCAACCAATGGCCCATTATTCTTATATTTCCATTTCCTCTTCATGAGTTATGAGTCCTTTCTCAATCTCTCCCAATCTCTCTCTTTCTATAAAATTGTTCATACAAGAATAATTTTAATTTTTGGTTTTAATGAGCATGAATTGCCTAGCATGCCAAGCCCTTCCAAGGACACAATCAGATAGGGAGAATAATAATGATCATGGTTATGAAACCTCCTCCTCTTTGATAGGCAAATCATGTTGCCTAGACGTCACACGGCGGTGGTCGGCCGACCTGACTCCGTCGTCGTACAAACCGATCAAGGCCGACGATGATGATGCTGGCTCTTCTCCTCCTCGTAAGAAGGCAAAGACGACCCGCCTCCGAAGCGACGGCGGTAGGAACGAGCCGAGGTTGGTGAGGAGCTCTGGGATGAGAAGGGATTGGAGCTTTGAGGATTTGAGATTGAGAGATCAAAAGAAAGGGAGATTCCATTGAGGCTCAATTTTTGTTCTTTTTGCTTTTTTCCCCCTCACTAAATGATCTCTCTCTGATTCTCTCCCTCTTTCTCTCATTATGTGTTTGTAATTTGTTGTGTTTATATTTTAAGTTTTTACTGTAAATTATTGGAGTTTGAATAATAATGTTCAAATTTGAGGTGGGAATGAGATTCAT ATGAGCATGAATTGCCTAGCATGCCAAGCCCTTCCAAGGACACAATCAGATAGGGAGAATAATAATGATCATGGTTATGAAACCTCCTCCTCTTTGATAGGCAAATCATGTTGCCTAGACGTCACACGGCGGTGGTCGGCCGACCTGACTCCGTCGTCGTACAAACCGATCAAGGCCGACGATGATGATGCTGGCTCTTCTCCTCCTCGTAAGAAGGCAAAGACGACCCGCCTCCGAAGCGACGGCGGTAGGAACGAGCCGAGGTTGGTGAGGAGCTCTGGGATGAGAAGGGATTGGAGCTTTGAGGATTTGAGATTGAGAGATCAAAAGAAAGGGAGATTCCATTGA MSMNCLACQALPRTQSDRENNNDHGYETSSSLIGKSCCLDVTRRWSADLTPSSYKPIKADDDDAGSSPPRKKAKTTRLRSDGGRNEPRLVRSSGMRRDWSFEDLRLRDQKKGRFH Homology
BLAST of Lcy02g016470 vs. ExPASy TrEMBL
Match: A0A6J1DZN2 (uncharacterized protein LOC111026067 OS=Momordica charantia OX=3673 GN=LOC111026067 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 3.4e-32 Identity = 88/127 (69.29%), Postives = 95/127 (74.80%), Query Frame = 0
BLAST of Lcy02g016470 vs. ExPASy TrEMBL
Match: A0A0A0LEC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902280 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 9.9e-32 Identity = 83/117 (70.94%), Postives = 90/117 (76.92%), Query Frame = 0
BLAST of Lcy02g016470 vs. ExPASy TrEMBL
Match: A0A5A7T546 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001040 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 4.9e-31 Identity = 85/117 (72.65%), Postives = 91/117 (77.78%), Query Frame = 0
BLAST of Lcy02g016470 vs. ExPASy TrEMBL
Match: A0A5D3E5T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004480 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.4e-30 Identity = 84/115 (73.04%), Postives = 89/115 (77.39%), Query Frame = 0
BLAST of Lcy02g016470 vs. ExPASy TrEMBL
Match: A0A1S3CRL3 (uncharacterized protein LOC103503546 OS=Cucumis melo OX=3656 GN=LOC103503546 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.4e-30 Identity = 84/115 (73.04%), Postives = 89/115 (77.39%), Query Frame = 0
BLAST of Lcy02g016470 vs. NCBI nr
Match: XP_038887010.1 (uncharacterized protein LOC120077178 [Benincasa hispida]) HSP 1 Score: 160.6 bits (405), Expect = 8.0e-36 Identity = 89/115 (77.39%), Postives = 94/115 (81.74%), Query Frame = 0
BLAST of Lcy02g016470 vs. NCBI nr
Match: XP_022159728.1 (uncharacterized protein LOC111026067 [Momordica charantia]) HSP 1 Score: 147.5 bits (371), Expect = 7.0e-32 Identity = 88/127 (69.29%), Postives = 95/127 (74.80%), Query Frame = 0
BLAST of Lcy02g016470 vs. NCBI nr
Match: KGN60385.1 (hypothetical protein Csa_002007 [Cucumis sativus]) HSP 1 Score: 146.0 bits (367), Expect = 2.0e-31 Identity = 83/117 (70.94%), Postives = 90/117 (76.92%), Query Frame = 0
BLAST of Lcy02g016470 vs. NCBI nr
Match: XP_031737602.1 (uncharacterized protein LOC116402474 [Cucumis sativus]) HSP 1 Score: 144.1 bits (362), Expect = 7.7e-31 Identity = 82/115 (71.30%), Postives = 88/115 (76.52%), Query Frame = 0
BLAST of Lcy02g016470 vs. NCBI nr
Match: KAA0038574.1 (uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa]) HSP 1 Score: 143.7 bits (361), Expect = 1.0e-30 Identity = 85/117 (72.65%), Postives = 91/117 (77.78%), Query Frame = 0
BLAST of Lcy02g016470 vs. TAIR 10
Match: AT5G46770.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 3.3e-11 Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = 0
BLAST of Lcy02g016470 vs. TAIR 10
Match: AT2G35215.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46770.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 1.9e-06 Identity = 36/113 (31.86%), Postives = 53/113 (46.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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