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Lcy02g016400 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCTCTCTCTAGACTCTTTCAAAAAGACCCTTTCAATCTCTCTCTCTCCATTCTCCAAATTTCCAATCTTTTCAATCTATATAACATCCATCGATTAATTCTTCCCCTATCTTAGCTTCTACAAAAATCCCAATTTCCCAAATGCCTTGCTTGGTCCTCCCTTGCTACGTCATGAAGAGACGACGGCGGAGGACCGCTCCACGCGTCGGCTACCGTCGTCTCAACAAATCCGAACTCCCCTGCAACGAGGGCGCGGAGGGTCCAGTGACGGTGGTGGTGGGGAAGGAAAAGAGAGAATTTTTGGTAGACCCTTTTGTGTTAGAAGAAAACCCGTTTCGGGTTTTGATCGAAAAAGGAGGAGATGAAGAAGAAAATGAGAAAGGTAGAGTGGGAAGAAGAAAAAGGGTGATATTTGTTGATGTTGATGCTATTTTGTTTGAGCATTTGTTGTGGCTGATGTACAATGATTGTTCTTCTTTGTTTAAGCTCAATGTAGAGGAAATTCTTGACTTTTATGCTCAAGATTTTTAGAATTCAGAATATAAAGGTAATTCAGTCATCCTTAATTGCAAGTATATGTAATTTTACTAATTATATTAAAGTTTATGTATATGGTGTTAATGTAATGGAAATAACAGAATAAAAGATTAATTATTCATGGGTTA TCTCTCTCTCTAGACTCTTTCAAAAAGACCCTTTCAATCTCTCTCTCTCCATTCTCCAAATTTCCAATCTTTTCAATCTATATAACATCCATCGATTAATTCTTCCCCTATCTTAGCTTCTACAAAAATCCCAATTTCCCAAATGCCTTGCTTGGTCCTCCCTTGCTACGTCATGAAGAGACGACGGCGGAGGACCGCTCCACGCGTCGGCTACCGTCGTCTCAACAAATCCGAACTCCCCTGCAACGAGGGCGCGGAGGGTCCAGTGACGGTGGTGGTGGGGAAGGAAAAGAGAGAATTTTTGGTAGACCCTTTTGTGTTAGAAGAAAACCCGTTTCGGGTTTTGATCGAAAAAGGAGGAGATGAAGAAGAAAATGAGAAAGGTAGAGTGGGAAGAAGAAAAAGGGTGATATTTGTTGATGTTGATGCTATTTTGTTTGAGCATTTGTTGTGGCTGATGTACAATGATTGTTCTTCTTTGTTTAAGCTCAATGTAGAGGAAATTCTTGACTTTTATGCTCAAGATTTTTAGAATTCAGAATATAAAGGTAATTCAGTCATCCTTAATTGCAAGTATATGTAATTTTACTAATTATATTAAAGTTTATGTATATGGTGTTAATGTAATGGAAATAACAGAATAAAAGATTAATTATTCATGGGTTA ATGCCTTGCTTGGTCCTCCCTTGCTACGTCATGAAGAGACGACGGCGGAGGACCGCTCCACGCGTCGGCTACCGTCGTCTCAACAAATCCGAACTCCCCTGCAACGAGGGCGCGGAGGGTCCAGTGACGGTGGTGGTGGGGAAGGAAAAGAGAGAATTTTTGGTAGACCCTTTTGTGTTAGAAGAAAACCCGTTTCGGGTTTTGATCGAAAAAGGAGGAGATGAAGAAGAAAATGAGAAAGGTAGAGTGGGAAGAAGAAAAAGGGTGATATTTGTTGATGTTGATGCTATTTTGTTTGAGCATTTGTTGTGGCTGATGTACAATGATTGTTCTTCTTTGTTTAAGCTCAATGTAGAGGAAATTCTTGACTTTTATGCTCAAGATTTTTAG MPCLVLPCYVMKRRRRRTAPRVGYRRLNKSELPCNEGAEGPVTVVVGKEKREFLVDPFVLEENPFRVLIEKGGDEEENEKGRVGRRKRVIFVDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYAQDF Homology
BLAST of Lcy02g016400 vs. ExPASy TrEMBL
Match: A0A0A0LK59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902380 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.9e-47 Identity = 104/136 (76.47%), Postives = 111/136 (81.62%), Query Frame = 0
BLAST of Lcy02g016400 vs. ExPASy TrEMBL
Match: A0A5D3E5S1 (Auxin responsive SAUR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004380 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 7.9e-46 Identity = 100/135 (74.07%), Postives = 111/135 (82.22%), Query Frame = 0
BLAST of Lcy02g016400 vs. ExPASy TrEMBL
Match: A0A1S3CQ48 (uncharacterized protein LOC103503536 OS=Cucumis melo OX=3656 GN=LOC103503536 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 7.9e-46 Identity = 100/135 (74.07%), Postives = 111/135 (82.22%), Query Frame = 0
BLAST of Lcy02g016400 vs. ExPASy TrEMBL
Match: A0A6J1EYP5 (uncharacterized protein LOC111437423 OS=Cucurbita moschata OX=3662 GN=LOC111437423 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 7.9e-38 Identity = 91/131 (69.47%), Postives = 101/131 (77.10%), Query Frame = 0
BLAST of Lcy02g016400 vs. ExPASy TrEMBL
Match: A0A6J1K475 (uncharacterized protein LOC111491030 OS=Cucurbita maxima OX=3661 GN=LOC111491030 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.2e-35 Identity = 87/130 (66.92%), Postives = 100/130 (76.92%), Query Frame = 0
BLAST of Lcy02g016400 vs. NCBI nr
Match: XP_038888374.1 (uncharacterized protein LOC120078224 [Benincasa hispida]) HSP 1 Score: 202.6 bits (514), Expect = 2.1e-48 Identity = 105/131 (80.15%), Postives = 114/131 (87.02%), Query Frame = 0
BLAST of Lcy02g016400 vs. NCBI nr
Match: XP_011652654.1 (auxin-responsive protein SAUR78 [Cucumis sativus] >KGN60396.1 hypothetical protein Csa_001277 [Cucumis sativus]) HSP 1 Score: 198.4 bits (503), Expect = 3.9e-47 Identity = 104/136 (76.47%), Postives = 111/136 (81.62%), Query Frame = 0
BLAST of Lcy02g016400 vs. NCBI nr
Match: XP_008465964.1 (PREDICTED: uncharacterized protein LOC103503536 [Cucumis melo]) HSP 1 Score: 193.0 bits (489), Expect = 1.6e-45 Identity = 100/135 (74.07%), Postives = 111/135 (82.22%), Query Frame = 0
BLAST of Lcy02g016400 vs. NCBI nr
Match: KAA0038583.1 (Auxin responsive SAUR protein [Cucumis melo var. makuwa] >TYK31158.1 Auxin responsive SAUR protein [Cucumis melo var. makuwa]) HSP 1 Score: 193.0 bits (489), Expect = 1.6e-45 Identity = 100/135 (74.07%), Postives = 111/135 (82.22%), Query Frame = 0
BLAST of Lcy02g016400 vs. NCBI nr
Match: XP_022931160.1 (uncharacterized protein LOC111437423 [Cucurbita moschata]) HSP 1 Score: 166.4 bits (420), Expect = 1.6e-37 Identity = 91/131 (69.47%), Postives = 101/131 (77.10%), Query Frame = 0
BLAST of Lcy02g016400 vs. TAIR 10
Match: AT2G35290.1 (unknown protein; Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 109.4 bits (272), Expect = 2.2e-24 Identity = 64/130 (49.23%), Postives = 84/130 (64.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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