Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCCAAGAGATTGATTCCGAAGTAATTCTTGGTATTCCGAGACCACGATGTGTTAGCCAGGACAAGCTGATTTGGCACTATGAAAGCAATGGCATATATTCAGTTAAAAGTGGTTATCGAGTGGTGTGTTCGCTGATGGGAAGAGCAAGCTACTCTAGTATGGACCAAGTGAGGAAATGGTGGAAGTTTTTGTGGAGTAGACAGATCCCAAGTAAGATAAAAATATTCTACTGGAGACTCAACCATGACTACCTCCCTACCGTGCTGAACCTTAGGAAAAGATGGATGGATTTGTCATCCATATGCCCTATATGCAACATGAAGGAGGAAACCACCTTTCATGCTATTTGGGGCTATAGGTGGGCGAAAACGCAGTGGCGTCTATCACCTTTCCATCCTGCCCCCCAAACAATCAGAAATGGTGCAGACCTATTATGGTGGACTAGCATGAATATGGCTGGCACTCGCTTTGATGATTTTGCTGTGCTATGTTGGTGGGTGTGGAATAGGAGGAACAAGGTGGTGTGTAGTGAAAGGGATCACGAAGGGGGCGATGAGAATGGGTGGAGATGGGTTGCAGAGTACATGACCCATTTTAGGGCATTCCAAGGGAGAAGGGTGGTTGGGGGAGGAAGCCGGAAGGAAACAATTAGGTGGAATCCTCCTAGTCTTCCTAACTACAAACTTAACACAGATGCAACAATATGTGTCGAGACGAAAACCAGCAGCTTAGGGGCCATTATTCGAAATGAAAAAGGAAGAGTGATGCTTACTGTGATGAGAAGGATCTAA
mRNA sequence
ATGTTCCAAGAGATTGATTCCGAAGTAATTCTTGGTATTCCGAGACCACGATGTGTTAGCCAGGACAAGCTGATTTGGCACTATGAAAGCAATGGCATATATTCAGTTAAAAGTGGTTATCGAGTGGTGTGTTCGCTGATGGGAAGAGCAAGCTACTCTAGTATGGACCAAGTGAGGAAATGGTGGAAGTTTTTGTGGAGTAGACAGATCCCAAGTAAGATAAAAATATTCTACTGGAGACTCAACCATGACTACCTCCCTACCGTGCTGAACCTTAGGAAAAGATGGATGGATTTGTCATCCATATGCCCTATATGCAACATGAAGGAGGAAACCACCTTTCATGCTATTTGGGGCTATAGGTGGGCGAAAACGCAGTGGCGTCTATCACCTTTCCATCCTGCCCCCCAAACAATCAGAAATGGTGCAGACCTATTATGGTGGACTAGCATGAATATGGCTGGCACTCGCTTTGATGATTTTGCTGTGCTATGTTGGTGGGTGTGGAATAGGAGGAACAAGGTGGTGTGTAGTGAAAGGGATCACGAAGGGGGCGATGAGAATGGGTGGAGATGGGTTGCAGAGTACATGACCCATTTTAGGGCATTCCAAGGGAGAAGGGTGGTTGGGGGAGGAAGCCGGAAGGAAACAATTAGGTGGAATCCTCCTAGTCTTCCTAACTACAAACTTAACACAGATGCAACAATATGTGTCGAGACGAAAACCAGCAGCTTAGGGGCCATTATTCGAAATGAAAAAGGAAGAGTGATGCTTACTGTGATGAGAAGGATCTAA
Coding sequence (CDS)
ATGTTCCAAGAGATTGATTCCGAAGTAATTCTTGGTATTCCGAGACCACGATGTGTTAGCCAGGACAAGCTGATTTGGCACTATGAAAGCAATGGCATATATTCAGTTAAAAGTGGTTATCGAGTGGTGTGTTCGCTGATGGGAAGAGCAAGCTACTCTAGTATGGACCAAGTGAGGAAATGGTGGAAGTTTTTGTGGAGTAGACAGATCCCAAGTAAGATAAAAATATTCTACTGGAGACTCAACCATGACTACCTCCCTACCGTGCTGAACCTTAGGAAAAGATGGATGGATTTGTCATCCATATGCCCTATATGCAACATGAAGGAGGAAACCACCTTTCATGCTATTTGGGGCTATAGGTGGGCGAAAACGCAGTGGCGTCTATCACCTTTCCATCCTGCCCCCCAAACAATCAGAAATGGTGCAGACCTATTATGGTGGACTAGCATGAATATGGCTGGCACTCGCTTTGATGATTTTGCTGTGCTATGTTGGTGGGTGTGGAATAGGAGGAACAAGGTGGTGTGTAGTGAAAGGGATCACGAAGGGGGCGATGAGAATGGGTGGAGATGGGTTGCAGAGTACATGACCCATTTTAGGGCATTCCAAGGGAGAAGGGTGGTTGGGGGAGGAAGCCGGAAGGAAACAATTAGGTGGAATCCTCCTAGTCTTCCTAACTACAAACTTAACACAGATGCAACAATATGTGTCGAGACGAAAACCAGCAGCTTAGGGGCCATTATTCGAAATGAAAAAGGAAGAGTGATGCTTACTGTGATGAGAAGGATCTAA
Protein sequence
MFQEIDSEVILGIPRPRCVSQDKLIWHYESNGIYSVKSGYRVVCSLMGRASYSSMDQVRKWWKFLWSRQIPSKIKIFYWRLNHDYLPTVLNLRKRWMDLSSICPICNMKEETTFHAIWGYRWAKTQWRLSPFHPAPQTIRNGADLLWWTSMNMAGTRFDDFAVLCWWVWNRRNKVVCSERDHEGGDENGWRWVAEYMTHFRAFQGRRVVGGGSRKETIRWNPPSLPNYKLNTDATICVETKTSSLGAIIRNEKGRVMLTVMRRI
Homology
BLAST of Lcy02g016350 vs. ExPASy TrEMBL
Match:
A0A803PEK8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 171.0 bits (432), Expect = 6.6e-39
Identity = 103/263 (39.16%), Postives = 139/263 (52.85%), Query Frame = 0
Query: 1 MFQEIDSEVILGIPRPRCVSQDKLIWHYESNGIYSVKSGYRVVCSLMGRASYSSMDQVR- 60
+F D+E+IL P +DK++WHY NG Y+VKSGY++ SL Y S DQ+
Sbjct: 1230 VFNMEDAELILSTPSTGWDLEDKIMWHYSKNGEYTVKSGYKMASSL-ATEQYQSDDQLYV 1289
Query: 61 KWWKFLWSRQIPSKIKIFYWRLNHDYLPTVLNLRKRWMDLSSICPICN-MKEETTFHAIW 120
WWK LW +IP KIK F W+L ++++PT NL KR + L +IC C+ ETT HA+W
Sbjct: 1290 DWWKTLWHLKIPPKIKHFVWKLAYNWIPTSANLAKRGVALDNICERCSGHVVETTAHALW 1349
Query: 121 GYRWAKTQWRLSPFHPAPQTIRNGADLLWWTSMNMA----GTRFDDFAVLCWWVWNRRNK 180
+ +K W +S + I+ G DLL + M MA TRF+ F V+ W +WN RN
Sbjct: 1350 ECKRSKELWAVSGLKDDMKQIK-GEDLLSFL-MRMARLWDKTRFEFFLVITWNIWNVRNN 1409
Query: 181 VVCSERDHEGGDENGWRWVAEYMTHFRAFQGR-RVVGGGSRKETIRWNPPSLPNYKLNTD 240
VV + GD W Y T FQG VG R+E +W P + KLN D
Sbjct: 1410 VVHGGKAPIAGDMVDW-----YRTFLTEFQGEGAAVGSRVRRENAKWGAPDMGQMKLNVD 1469
Query: 241 ATICVETKTSSLGAIIRNEKGRV 257
A + S LG + R+ GRV
Sbjct: 1470 ARVKGGGGVSGLGCVARDHGGRV 1484
BLAST of Lcy02g016350 vs. ExPASy TrEMBL
Match:
A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)
HSP 1 Score: 161.0 bits (406), Expect = 6.8e-36
Identity = 87/262 (33.21%), Postives = 135/262 (51.53%), Query Frame = 0
Query: 2 FQEIDSEVILGIPRPRCVSQDKLIWHYESNGIYSVKSGYRVVC---SLMGRASYSSMDQV 61
F +++ IL IP R +D+LIW+YE G+YSV+SGY+V + S SS ++V
Sbjct: 773 FTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEV 832
Query: 62 RKWWKFLWSRQIPSKIKIFYWRLNHDYLPTVLNLRKRWMDLSSICPICNMKEETTFHAIW 121
R WW W IP+KIK+F WRL D LPT NL KR +++++ C C E + H W
Sbjct: 833 RCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFW 892
Query: 122 GYRWAKTQWRLSPFHPAPQTIRNGADLLWWTSMNMAGTRFDDFAVLCWWVWNRRNKVVCS 181
++A+ W S F + +L + +++ F++ V+ W +WN+RN +
Sbjct: 893 ICKFAEALWINSKFGKLSPFL-----ILRESHESLSKADFEELCVVIWGLWNQRNARAFN 952
Query: 182 ERD---HEGGDENGWRWVAEYMTHFRAFQGRRVVGGGSRKETIRWNPPSLPNYKLNTDAT 241
+ + G E W +Y FR + + G + I W PP YK+NTDA+
Sbjct: 953 DSTKTVFKIGMEL-VEWANKYAMEFREAKSNPITGRVTNTAEILWQPPDEGIYKINTDAS 1012
Query: 242 ICVETKTSSLGAIIRNEKGRVM 258
+ + LG II N++G+VM
Sbjct: 1013 FLASDQHAGLGIIIHNDRGQVM 1028
BLAST of Lcy02g016350 vs. ExPASy TrEMBL
Match:
A0A803QEG9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 158.7 bits (400), Expect = 3.4e-35
Identity = 94/277 (33.94%), Postives = 139/277 (50.18%), Query Frame = 0
Query: 2 FQEIDSEVILGIPRPRCVSQDKLIWHYESNGIYSVKSGYRVVCSLMGRASYSSMDQVRKW 61
F +D E IL +P ++DKLIWH+ S+G ++V+S Y + SL SS +W
Sbjct: 1488 FCPLDIEKILTLPLSFFPTRDKLIWHHHSSGNFTVQSAYHLATSLENEDLSSSSTSAVQW 1547
Query: 62 WKFLWSRQIPSKIKIFYWRLNHDYLPTVLNLRKRWMDLSSICPICNMKEETTFHAIWGYR 121
WK WS QIP K+KIF WR+ HD LP +L +R + S C IC E+T HA++G +
Sbjct: 1548 WKHFWSLQIPQKVKIFAWRVIHDALPVATSLVRRKIITDSTCSICKQAWESTGHALFGCK 1607
Query: 122 WAKTQWRLSPFH---PAPQTIRNGADLLWWTSMNMAGTRFDDFAVLCWWVWNRRNKVVCS 181
+AK WR F+ A +++NG D L + S ++ + W +W RNKVV
Sbjct: 1608 YAKAVWRSFHFNFNWSAAISMKNG-DYLMYLSSIYNKAEMEELFCIMWAIWGERNKVVHG 1667
Query: 182 ERDHEGGDENGWRWVAEYMTHFRAFQGRRV----------VGGGSRKET---------IR 241
+ D + V ++ +FRA Q + V V G S++ +
Sbjct: 1668 KNARRANDLAVFATV--FLQNFRAAQHKPVAAATAPAATDVAGPSQQPSKPPAATAALSS 1727
Query: 242 WNPPSLPNYKLNTDATICVETKTSSLGAIIRNEKGRV 257
W PP+ YKLNTDA + T +GA++R+ G V
Sbjct: 1728 WRPPAADCYKLNTDAAAENSSNTIGVGAVLRDASGSV 1761
BLAST of Lcy02g016350 vs. ExPASy TrEMBL
Match:
A0A803P5M6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 158.3 bits (399), Expect = 4.4e-35
Identity = 90/281 (32.03%), Postives = 137/281 (48.75%), Query Frame = 0
Query: 2 FQEIDSEVILGIPRPRCVSQDKLIWHYESNGIYSVKSGYRVVCSLMGRASYSSMDQVRKW 61
FQ+ID + IL IP D+L+WH+ NGIYSVK+G+ + +L + S S+ ++ +W
Sbjct: 930 FQQIDIDRILSIPLAYFAGTDRLVWHHSPNGIYSVKTGFHLATTLEDQNSSSTSNKQSEW 989
Query: 62 WKFLWSRQIPSKIKIFYWRLNHDYLPTVLNLRKRWMDLSSICPICNMKEETTFHAIWGYR 121
WKF W+ ++P KI+IF W++ + LPT + L KR + S C +C E+ HA++ +
Sbjct: 990 WKFFWNLKLPPKIRIFAWKVFQNILPTAVALFKRKVLDSGECSLCTSNWESIGHALFSCK 1049
Query: 122 WAKTQWRLSPFHPAPQTIRN--GADLLWWTSMNMAGTRFDDFAVLCWWVWNRRNKVVCSE 181
AK W+LS F N D L+ S F+ + W +W RNKVV
Sbjct: 1050 HAKDIWKLSRFRIDFSQAHNMFNGDYLYHLSTIYQQHDFETLLCVLWGIWTDRNKVV--- 1109
Query: 182 RDHEGGDENGWRWVAEYMTHF------RAFQGRRVVGGGSR----------KETIRWNPP 241
GG + +Y + F Q R V S + RW PP
Sbjct: 1110 ---HGGQPRHPTAIVQYASKFYEDFNKAKLQNRPVAATSSHHSSPSTSATDQHVQRWRPP 1169
Query: 242 SLPNYKLNTDATICVETKTSSLGAIIRNEKGRVMLTVMRRI 265
YKLN DA +E K +GAI+R+++G V+ + + +
Sbjct: 1170 VRNGYKLNVDAATNIEQKKLGIGAILRDQQGTVLAALSKAV 1204
BLAST of Lcy02g016350 vs. ExPASy TrEMBL
Match:
A0A803QCG6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 157.5 bits (397), Expect = 7.5e-35
Identity = 91/281 (32.38%), Postives = 138/281 (49.11%), Query Frame = 0
Query: 2 FQEIDSEVILGIPRPRCVSQDKLIWHYESNGIYSVKSGYRVVCSLMGRASYSSMDQVRKW 61
FQ ID E IL IP S D+LIWH+ ++G Y+VKSG+ + SL + + S+ D W
Sbjct: 1359 FQPIDVEKILTIPLSFFASNDRLIWHHSTSGSYNVKSGFHLASSLEEQDACSASDLNLAW 1418
Query: 62 WKFLWSRQIPSKIKIFYWRLNHDYLPTVLNLRKRWMDLSSICPICNMKEETTFHAIWGYR 121
WKF WS +P KI+IF W+++H+ LPT L KR + S+ C +C E+ HA++ +
Sbjct: 1419 WKFFWSLNLPPKIRIFAWKVHHNILPTAAALHKRKIIDSAACSLCTSSWESVGHALFDCK 1478
Query: 122 WAKTQWRLSPF---HPAPQTIRNGADLLWWTSMNMAGTRFDDFAVLCWWVWNRRNKVVCS 181
A+ W+ S F +T++NG D L S F+ + W +W RNK+
Sbjct: 1479 HARKIWQDSKFLTDFNMAKTMQNG-DYLQLLSSVYTKEDFELLVCIMWGIWTDRNKI--- 1538
Query: 182 ERDHEGGDENGWRWVAEYMTHF-------RAFQGRRVVG--------GGSRKETIRWNPP 241
GG + Y T F ++ GR +K+ + W+ P
Sbjct: 1539 ---FHGGQARPSSSIVAYATSFHQDYCRAKSHSGRTATSPSTDPLPINNHQKKQVPWSAP 1598
Query: 242 SLPNYKLNTDATICVETKTSSLGAIIRNEKGRVMLTVMRRI 265
+L YKLN DA E K +GAI+R+ G V+ + + +
Sbjct: 1599 TLNGYKLNVDAATNTEQKLLGIGAILRDHNGMVIAALSKTV 1632
BLAST of Lcy02g016350 vs. NCBI nr
Match:
XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])
HSP 1 Score: 161.0 bits (406), Expect = 1.4e-35
Identity = 87/262 (33.21%), Postives = 135/262 (51.53%), Query Frame = 0
Query: 2 FQEIDSEVILGIPRPRCVSQDKLIWHYESNGIYSVKSGYRVVC---SLMGRASYSSMDQV 61
F +++ IL IP R +D+LIW+YE G+YSV+SGY+V + S SS ++V
Sbjct: 773 FTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEV 832
Query: 62 RKWWKFLWSRQIPSKIKIFYWRLNHDYLPTVLNLRKRWMDLSSICPICNMKEETTFHAIW 121
R WW W IP+KIK+F WRL D LPT NL KR +++++ C C E + H W
Sbjct: 833 RCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFW 892
Query: 122 GYRWAKTQWRLSPFHPAPQTIRNGADLLWWTSMNMAGTRFDDFAVLCWWVWNRRNKVVCS 181
++A+ W S F + +L + +++ F++ V+ W +WN+RN +
Sbjct: 893 ICKFAEALWINSKFGKLSPFL-----ILRESHESLSKADFEELCVVIWGLWNQRNARAFN 952
Query: 182 ERD---HEGGDENGWRWVAEYMTHFRAFQGRRVVGGGSRKETIRWNPPSLPNYKLNTDAT 241
+ + G E W +Y FR + + G + I W PP YK+NTDA+
Sbjct: 953 DSTKTVFKIGMEL-VEWANKYAMEFREAKSNPITGRVTNTAEILWQPPDEGIYKINTDAS 1012
Query: 242 ICVETKTSSLGAIIRNEKGRVM 258
+ + LG II N++G+VM
Sbjct: 1013 FLASDQHAGLGIIIHNDRGQVM 1028
BLAST of Lcy02g016350 vs. NCBI nr
Match:
XP_030487384.1 (uncharacterized protein LOC115704310 [Cannabis sativa])
HSP 1 Score: 156.4 bits (394), Expect = 3.5e-34
Identity = 83/259 (32.05%), Postives = 130/259 (50.19%), Query Frame = 0
Query: 1 MFQEIDSEVILGIPRPRCVSQDKLIWHYESNGIYSVKSGYRVVCSLMGRASYSSMDQVRK 60
+F D+++IL +P +DK++WHY +G YSV+SGYR+ +L R S + K
Sbjct: 632 VFNPTDADLILSMPTSEWDIEDKILWHYSKDGEYSVRSGYRMAAALKVRDVQSDTEATEK 691
Query: 61 WWKFLWSRQIPSKIKIFYWRLNHDYLPTVLNLRKRWMDLSSICPIC-NMKEETTFHAIWG 120
WWK LW +IP K+K F W++ H ++PT L R + + C C N + ET FH +W
Sbjct: 692 WWKLLWKLKIPPKVKHFVWKMAHSWIPTNAVLAHRNIQVEPYCSRCSNGEYETVFHELWT 751
Query: 121 YRWAKTQWRLSPFHPAPQTIRNGADLLWWTSMNMAGTR--FDDFAVLCWWVWNRRNKVVC 180
R + W + F+ Q + L + ++ T+ + F VL W +W RN V
Sbjct: 752 CRVNREVWTSAGFYGKIQRLGREDVLAFLMRISTTFTKEELELFLVLSWNLWYVRNSV-- 811
Query: 181 SERDHEGGDENGWRWVAEYMTHFRAFQGRRVVGGGSRKETIRWNPPSLPNYKLNTDATIC 240
+ H+ W ++Y++ FR Q G +RKET W PP+ +K+N D +
Sbjct: 812 THGGHKPQASAILEWCSKYLSEFR--QSNAPKGDRARKETACWLPPATEEFKINVDVGVK 871
Query: 241 VETKTSSLGAIIRNEKGRV 257
V SS ++R+ G V
Sbjct: 872 VRAGVSSTSLVVRDHVGTV 886
BLAST of Lcy02g016350 vs. NCBI nr
Match:
KAF4347944.1 (hypothetical protein G4B88_014951 [Cannabis sativa])
HSP 1 Score: 156.0 bits (393), Expect = 4.5e-34
Identity = 83/258 (32.17%), Postives = 126/258 (48.84%), Query Frame = 0
Query: 2 FQEIDSEVILGIPRPRCVSQDKLIWHYESNGIYSVKSGYRVVCSLMGRASYSSMDQVRKW 61
F + D +LGI P D + WH NGIYSV SGY++ + A S+ ++ W
Sbjct: 40 FHQDDIPWVLGIKLP-MNKPDWITWHSSPNGIYSVASGYKLRFTNPITAECSNKSSIKAW 99
Query: 62 WKFLWSRQIPSKIKIFYWRLNHDYLPTVLNLRKRWMDLSSICPICNMKEETTFHAIWGYR 121
WKF+W + SK+K F WR+ H +LPT + L +R M L + C +CN +EE HA+W
Sbjct: 100 WKFVWGSILTSKMKNFLWRMFHHWLPTKIELTRRGMALDTRCDLCNQQEEDICHALWLCP 159
Query: 122 WAKTQWR-LSPFHPAPQTIRNGADLLWWTSMNMAGTRFDDFAVLCWWVWNRRNKVVCSER 181
W+ L P I N AD +WW ++ F F W VW RRN +
Sbjct: 160 KTLKLWKHLGSLQHFPSLITNAADFIWWLKDHIPKDVFLKFIGFSWLVWQRRNSFIF--- 219
Query: 182 DHEGGDENGWRWVAEYMTHFRAFQGRRVVGGGSRKETIRWNPPSLPNYKLNTDATICVET 241
H+ ++ W A + ++ + K+ + W PP + Y +N DA++ V
Sbjct: 220 QHKALNDQMWINWASDLLELHLGSNQKSPPTIAPKQVLHWLPPPIDFYLINADASLVVGQ 279
Query: 242 KTSSLGAIIRNEKGRVML 259
SL A+IR+ KG +++
Sbjct: 280 PGFSLSAVIRDSKGSLVV 293
BLAST of Lcy02g016350 vs. NCBI nr
Match:
XP_024956542.1 (uncharacterized protein LOC112498908 [Citrus sinensis])
HSP 1 Score: 155.6 bits (392), Expect = 5.9e-34
Identity = 93/268 (34.70%), Postives = 138/268 (51.49%), Query Frame = 0
Query: 2 FQEIDSEVILGIPRPRCVSQDKLIWHYESNGIYSVKSGYRVVCSLMGRASYSSMDQVRKW 61
F ++D++VI IP PR + +D+LIWH+ +G Y+VKSGY+ + A SS + +
Sbjct: 749 FDKMDADVITQIPLPRRLREDELIWHFGKSGQYTVKSGYQRALKIRFPAMPSSSESSKNE 808
Query: 62 WKFLWSRQIPSKIKIFYWRLNHDYLPTVLNLRKRWMDLSSICPICNMKEETTFHAIWGYR 121
W +WS +P KI+IF WR + LP+ NL KR + C +C M E FHA+ +
Sbjct: 809 WNIIWSLALPKKIRIFVWRAAKNLLPSAENLWKRKIVQEPTCQLCKMGIENVFHALVDCK 868
Query: 122 WAKTQWRLSPFHPAPQTI--RNGADLLWWTSMNMAGTRFDDFAVLCWWVWNRRNKVVCSE 181
AK WRLS F+ Q ++ LL + D FAV+ W WN RN+ +
Sbjct: 869 AAKKVWRLSLFYIDIQAAPGQDILSLLHGVKRMRSNADVDLFAVMLWAKWNARNQWL--- 928
Query: 182 RDHEGGDENGWRWVAE---YMTHFRAFQGRRVVGGGSRKET--IRWNPPSLPNYKLNTDA 241
+G EN VA+ M ++ Q V G +++ + WNPP K+NTDA
Sbjct: 929 --FKGKRENPQSVVAKAEAVMEAYKRVQPSADVSHGKQQKVAQLGWNPPQEGFVKINTDA 988
Query: 242 TICVETKTSSLGAIIRNEKGRVMLTVMR 263
E + LGA+IR+E G+V T ++
Sbjct: 989 ATNSEKNLAGLGAVIRDENGQVTATAIK 1011
BLAST of Lcy02g016350 vs. NCBI nr
Match:
KAF4380736.1 (hypothetical protein F8388_017090 [Cannabis sativa] >KAF4393151.1 hypothetical protein G4B88_001885 [Cannabis sativa])
HSP 1 Score: 154.1 bits (388), Expect = 1.7e-33
Identity = 81/245 (33.06%), Postives = 122/245 (49.80%), Query Frame = 0
Query: 15 RPRCVSQDKLIWHYESNGIYSVKSGYRVVCSLMGRASYSSMDQVRKWWKFLWSRQIPSKI 74
+P + D + WH NG YSV SGY++ A S++ ++ WWKF+W + K+
Sbjct: 255 KPHLNNPDWITWHPTPNGTYSVASGYKLRFINPATAECSNLSSIKAWWKFVWGSILTPKM 314
Query: 75 KIFYWRLNHDYLPTVLNLRKRWMDLSSICPICNMKEETTFHAIWGYRWAKTQWRLSPFHP 134
K F WRL H +LPT + L +R M L + C +CN +EE HA+W +
Sbjct: 315 KNFLWRLFHHWLPTKIELTRRGMALDTRCDLCNQQEEDICHALWIF-------------- 374
Query: 135 APQTIRNGADLLWWTSMNMAGTRFDDFAVLCWWVWNRRNKVVCSERDHEGGDENGW-RWV 194
P I N AD +WW ++ F F W VW RRNK + H+G + W RW
Sbjct: 375 -PSRITNAADFIWWLKDHIPKDDFIRFIGFSWLVWQRRNKFIF---QHKGLKDQMWIRWA 434
Query: 195 AEYMTHFRAFQGRRVVGGGSRKETIRWNPPSLPNYKLNTDATICVETKTSSLGAIIRNEK 254
A+ + + + S K+ ++W PP L +NTDA++ V SL A+IR+ K
Sbjct: 435 AD-LLELQLGSHQNSPPKISPKQVMKWLPPPLDFCNINTDASLVVGQSGFSLSAVIRDSK 480
Query: 255 GRVML 259
G +++
Sbjct: 495 GSLVV 480
BLAST of Lcy02g016350 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 86.3 bits (212), Expect = 4.1e-17
Identity = 66/249 (26.51%), Postives = 106/249 (42.57%), Query Frame = 0
Query: 22 DKLIWHYESNGIYSVKSGYRVVCSLMGRASYS---SMDQVRKWWKFLWSRQIPSKIKIFY 81
D W Y S+G Y+VKSGY V+ ++ + S S + ++ +W Q KI+ F
Sbjct: 211 DSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFL 270
Query: 82 WRLNHDYLPTVLNLRKRWMDLSSICPICNMKEETTFHAIWGYRWAKTQWRLSPFHPAP-- 141
W+ + LP L R + S C C +ET H ++ +A+ W +S P P
Sbjct: 271 WKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSI-PIPLG 330
Query: 142 --QTIRNGADLLWWTSMNMAGTRFDDFAV----LCWWVWNRRNKVVCSERDHEGGDENGW 201
+L W ++ +++ + L W +W RN++V R E +
Sbjct: 331 GEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVF--RGREFNAQEVL 390
Query: 202 RWVAEYMTHFRAFQGRRVVGGG---SRKETIRWNPPSLPNYKLNTDATICVETKTSSLGA 257
R + + +R G +R RW PP K NTDAT + + +G
Sbjct: 391 RRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGW 450
BLAST of Lcy02g016350 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 81.3 bits (199), Expect = 1.3e-15
Identity = 69/249 (27.71%), Postives = 103/249 (41.37%), Query Frame = 0
Query: 22 DKLIWHYESNGIYSVKSGYRVVCSLMG------RASYSSMDQVRKWWKFLWSRQIPSKIK 81
DK+IW+Y + G Y+V+SGY ++ + S+D + +W+ I K+K
Sbjct: 117 DKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTR----IWNLPIMPKLK 176
Query: 82 IFYWRLNHDYLPTVLNLRKRWMDLSSICPICNMKEETTFHAIWGYRWAKTQWRLSPFH-P 141
F WR L T L R M + CP C+ + E+ HA++ +A WRLS
Sbjct: 177 HFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLI 236
Query: 142 APQTIRNGADLLWWTSMN-MAGTRFDDF-----AVLCWWVWNRRNKVVCSERDHEGGDEN 201
Q + N + +N + T DF L W +W RN VV + + E +
Sbjct: 237 RNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFN-KFRESPSKT 296
Query: 202 GWRWVAEYMTHFRAFQGRRVVGGGSR---KETIRWNPPSLPNYKLNTDATICVETKTSSL 255
AE A Q + +R + I W P K N DA V+ ++
Sbjct: 297 VLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATG 356
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A803PEK8 | 6.6e-39 | 39.16 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A6J1DAR4 | 6.8e-36 | 33.21 | uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A803QEG9 | 3.4e-35 | 33.94 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803P5M6 | 4.4e-35 | 32.03 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QCG6 | 7.5e-35 | 32.38 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_022150918.1 | 1.4e-35 | 33.21 | uncharacterized protein LOC111018954 [Momordica charantia] | [more] |
XP_030487384.1 | 3.5e-34 | 32.05 | uncharacterized protein LOC115704310 [Cannabis sativa] | [more] |
KAF4347944.1 | 4.5e-34 | 32.17 | hypothetical protein G4B88_014951 [Cannabis sativa] | [more] |
XP_024956542.1 | 5.9e-34 | 34.70 | uncharacterized protein LOC112498908 [Citrus sinensis] | [more] |
KAF4380736.1 | 1.7e-33 | 33.06 | hypothetical protein F8388_017090 [Cannabis sativa] >KAF4393151.1 hypothetical p... | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 4.1e-17 | 26.51 | Ribonuclease H-like superfamily protein | [more] |
AT3G09510.1 | 1.3e-15 | 27.71 | Ribonuclease H-like superfamily protein | [more] |