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Lcy02g016020 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAATATCAACAGTAAAATATTTCTATAAAGAAACAATAATAATAACGATGTCGGCGGCTCAGCCGTTAGATCCTCACGACCAGATGAGATCCAGAGACGTCGGCAAGGTGGCTCGAGGCGAGCAAGCACCGAGGCCCGCTCATGAATACGGCACCGTTTCAAAGCCTCCGCCTCCTTCTTCCTCCTCCGTTTCCTCCGCTCAAACCAACGTCGACGATAACGACGATCGTCGCCGTGGCGGCGAAGACAAAGAACATAAGGTTTCTTCCCTCTCTCTTCCTTTTTCTCTCACTGTGTGTTGACATTTTGAACGATACTTGTTTACTTACTCGTTACGTTTGGAAAAAATACACTTTTAGCTCCGTAGGAGAGTGTGAAACTTATTAGGGACATTAGGGACAAGAAGTTGAGTTATAAAATTTGAGGTTGTTTTGTCGAGTAGGACTTAACAAATTTGTGGGATCTACAATAAATTGTTGGAACAAACTTAACAAGTTTGTAGAGCTCACAATACAACGTGTCTTAATTAGATAAAAACAAAACTTAGACTACATACCCCATTAAAATTTTGACAATTAAGAAAGAGGAAGGGAGAAAATGGGAAAACTTTTTTTATCTCTTCTAGTTGTCAAAATTTTAACGGTAGTATGTAGAGAGATCCATATATGCAGCCAACTTGACTGCCAACTAAGAAGTAAAGGAGAAAATGAATTTTTTTTTGAAAAAAACTTGTTTACATATCGATATGTAGGGATCTCCGTACATACCACCATTAAAACGTTGACAATTAAGAGAGATAACAAAAAATTCTCATTTTCTTCCTTCCTCTTTCTTACTTGTCGAGATTTTAATGGGGTATGTAGGGAGATCCCTACATACCGGTATGCAGGCAAGTTTTGTTCAATTTTTTTTTTCTATCTCTCTTAGTTGTCAATGTCAACATTTAATGGTGATATGTAGGAGATTCCTTCATATTAGTATGCAACGAAGTTTTTTCCCTTAGATAATAAATTTGTGGACTCTATAATAGGATGTTGAACATGACTCTCTTTGTCCCAAACACTCCTATTTTTTTATTTTTTGTTTTTTGTTGCAGTCTAAGTATTCTATAAAAAATGACAGATTAATTTCCTTATACGGAAACGAGACTTATTAAATTGTTGGTTTAAATCTTACTTTCGTTCTATTTTAGTTCATAAACTTTCAAAATGTCCGACGTCAATTCTATATATTTTAGTTTTTAAACTTTCAAAATTTTCATTTAGTCTCTGACTCCCTAAACTAAAAAAAAAAATACTATTTAATACGACCAAAAACTATAGTTATTGTTTGAAAGTTCAACTTAGGGATTAAATTGGACATTTAAAAAAGTTTCATCTAAATAGAATAAACTTAATAAGATTTAACCTTAAATTGTTTTTGGCTCTTGATTTAGGTGCATGCAGAAGGAGGAGGAGCACGTGCCTGAATGCGGCAAGTTCACCCAGTATTATCGTTCCGGGTAAGAAAATCATTTGCAGACGACAATATTTTGATCCTAAATTCTACTAACGTGGGTAGATGATTTTTTTTTTTTTTTTTTTTTTGGAAAATACTTGACTACCCGTACCGATAGGGCTTCCTACATACCAACATTGTCCTATATAACATTTAAAATCTTGACGCTAAGAGAGATTAAAAAAAAATCTCATTACCGGCCCAGAGGAATATATTATTTCATGTCACAAATAGGGGAGAAAAAAAATGTCATAAATGGCTGGGGTACGTTTTTGGTGGGAAAAACAGAAATTTTCGCATTTTAAAAAATTTATGACATTTTTTCAACATCATGAATCTATAACTTCAATTATTAGCTTTCATTAATTGAAAATAATTTTTGTCTAGTACTATTTTTATTTAAAAAATAAAGAAAAAAAACTTAAAAAGAAAAAACATATACCGAACAATTCTTTTCGTTTCATTGGAATGGAAGTTATACTTGGATTCCATTTCTAAAGCATGAAATATAGTCTTGTTTTCACTGAAAAAAGATCAGTTTTAAACTTTTTTAGTTTGAAAGTTTCAAACTAAAAGTTTTAACATTTTTTTTTTAAAACAAACGATCAGGCATAATCAAACCAAAAAAGGAAGTCCAAATCTAAGCAACAGCCAATATACTTCATCTAAGATTCAGCCAAGCCTTCAAATCCTTGATCATGTTAGCTCCAAGCTAGCTACTGGTTTACTTCGGACTATATCGATATCAACTCGAAAACCAGACCCGAACTCATAGATTAGGCCTGCAACAATATTACCATCAAATTAAAACATTTAGCACATTGCAATCAACGAAGATAAGCACTTTAGAAATAGATAAACATAAACAGATTAACTCTATCAATTCACTCCCAACCTAAATCTTGCTAGTCCTCGAGCAAGCCTAAACCTATATGATATGACTGGAAGAGATTCAAATGTTGGAATATCATGATCCAATCCCTGCTCTACATATACTAAAACTTTTGCTTAAGAGAAGCTAATGTATGCTAACAAAAATGAGACAACTCAAAACTTTCCAAGAGAATTCTCGCGTGTTTTGATTTGTTTGCCATATTTCAATGTATTAATGTCTTGGTGAAGGCAATTTTACTACGTGCAGGTTGAGAAAGGGAACAAGGCAAAGGGAGAGCTAGGTGTTTTTCCTTGTTTTAAGGTTGTGTAAAATAAATAATGAAAAATACTTTATCTAATATTTTTGTATTTTAAAATTTAACACTAGAAGTTTGTTCCTCAGTGTGTTGTGTTCTTTCAT ACAATATCAACAGTAAAATATTTCTATAAAGAAACAATAATAATAACGATGTCGGCGGCTCAGCCGTTAGATCCTCACGACCAGATGAGATCCAGAGACGTCGGCAAGGTGGCTCGAGGCGAGCAAGCACCGAGGCCCGCTCATGAATACGGCACCGTTTCAAAGCCTCCGCCTCCTTCTTCCTCCTCCGTTTCCTCCGCTCAAACCAACGTCGACGATAACGACGATCGTCGCCGTGGCGGCGAAGACAAAGAACATAAGGTGCATGCAGAAGGAGGAGGAGCACGTGCCTGAATGCGGCAAGTTCACCCAGTATTATCGTTCCGGGTTGAGAAAGGGAACAAGGCAAAGGGAGAGCTAGGTGTTTTTCCTTGTTTTAAGGTTGTGTAAAATAAATAATGAAAAATACTTTATCTAATATTTTTGTATTTTAAAATTTAACACTAGAAGTTTGTTCCTCAGTGTGTTGTGTTCTTTCAT ATGTCGGCGGCTCAGCCGTTAGATCCTCACGACCAGATGAGATCCAGAGACGTCGGCAAGGTGGCTCGAGGCGAGCAAGCACCGAGGCCCGCTCATGAATACGGCACCGTTTCAAAGCCTCCGCCTCCTTCTTCCTCCTCCGTTTCCTCCGCTCAAACCAACGTCGACGATAACGACGATCGTCGCCGTGGCGGCGAAGACAAAGAACATAAGGTGCATGCAGAAGGAGGAGGAGCACGTGCCTGA MSAAQPLDPHDQMRSRDVGKVARGEQAPRPAHEYGTVSKPPPPSSSSVSSAQTNVDDNDDRRRGGEDKEHKVHAEGGGARA Homology
BLAST of Lcy02g016020 vs. ExPASy Swiss-Prot
Match: Q9LPJ2 (Putative cytochrome c oxidase subunit 6b-like OS=Arabidopsis thaliana OX=3702 GN=At1g32710 PE=3 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 1.6e-09 Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 0
BLAST of Lcy02g016020 vs. ExPASy TrEMBL
Match: A0A0A0LEH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910720 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.5e-21 Identity = 60/78 (76.92%), Postives = 69/78 (88.46%), Query Frame = 0
BLAST of Lcy02g016020 vs. ExPASy TrEMBL
Match: A0A5D3E4S8 (Putative cytochrome c oxidase subunit 6b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004020 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.7e-17 Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 0
BLAST of Lcy02g016020 vs. ExPASy TrEMBL
Match: A0A1S3CQ05 (putative cytochrome c oxidase subunit 6b-like OS=Cucumis melo OX=3656 GN=LOC103503497 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.7e-17 Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 0
BLAST of Lcy02g016020 vs. ExPASy TrEMBL
Match: A0A6J1F3D0 (cytochrome c oxidase subunit 6b-3-like OS=Cucurbita moschata OX=3662 GN=LOC111439604 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.8e-16 Identity = 49/64 (76.56%), Postives = 53/64 (82.81%), Query Frame = 0
BLAST of Lcy02g016020 vs. ExPASy TrEMBL
Match: A0A4P1QQX4 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_00938 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.2e-13 Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of Lcy02g016020 vs. NCBI nr
Match: KAE8651459.1 (hypothetical protein Csa_002423 [Cucumis sativus]) HSP 1 Score: 117.5 bits (293), Expect = 5.5e-23 Identity = 64/81 (79.01%), Postives = 72/81 (88.89%), Query Frame = 0
BLAST of Lcy02g016020 vs. NCBI nr
Match: XP_031737981.1 (cytochrome c oxidase subunit 6B isoform X2 [Cucumis sativus]) HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20 Identity = 60/78 (76.92%), Postives = 69/78 (88.46%), Query Frame = 0
BLAST of Lcy02g016020 vs. NCBI nr
Match: XP_031737980.1 (putative cytochrome c oxidase subunit 6b-like isoform X1 [Cucumis sativus]) HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20 Identity = 60/78 (76.92%), Postives = 69/78 (88.46%), Query Frame = 0
BLAST of Lcy02g016020 vs. NCBI nr
Match: XP_038886888.1 (putative cytochrome c oxidase subunit 6b-like [Benincasa hispida]) HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20 Identity = 59/72 (81.94%), Postives = 65/72 (90.28%), Query Frame = 0
BLAST of Lcy02g016020 vs. NCBI nr
Match: XP_008465918.1 (PREDICTED: putative cytochrome c oxidase subunit 6b-like [Cucumis melo] >KAA0038526.1 putative cytochrome c oxidase subunit 6b-like [Cucumis melo var. makuwa] >TYK31123.1 putative cytochrome c oxidase subunit 6b-like [Cucumis melo var. makuwa]) HSP 1 Score: 98.2 bits (243), Expect = 3.4e-17 Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 0
BLAST of Lcy02g016020 vs. TAIR 10
Match: AT1G32710.1 (Cytochrome c oxidase, subunit Vib family protein ) HSP 1 Score: 63.2 bits (152), Expect = 1.1e-10 Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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