Homology
BLAST of Lcy02g015890 vs. ExPASy Swiss-Prot
Match:
B3H672 (Pentatricopeptide repeat-containing protein At4g17616 OS=Arabidopsis thaliana OX=3702 GN=At4g17616 PE=2 SV=1)
HSP 1 Score: 590.9 bits (1522), Expect = 1.9e-167
Identity = 318/654 (48.62%), Postives = 443/654 (67.74%), Query Frame = 0
Query: 60 RPQIPLIHCVSTSVHATKLCWGGSSYAVLLGKLETALKDHQIDEAWEFFNDFRRLYGFPK 119
R P + C TSV +L W SS +L KLETALKDH++D+AW+ F DF+RLYGFP+
Sbjct: 31 RTSKPSLFC--TSVKPARLNWEVSSQVILKKKLETALKDHRVDDAWDVFKDFKRLYGFPE 90
Query: 120 DNVLLVLVSQLSYASDCKWLQKACNLVLQIWKEKPVVLQLDALTKLGLGLARSQMPIPAS 179
++ V+ LSY+SD WL KA +L K+ P +L D LTKL L LAR+QM A
Sbjct: 91 SVIMNRFVTVLSYSSDAGWLCKASDLTRLALKQNPGMLSGDVLTKLSLSLARAQMVESAC 150
Query: 180 EILRLMLQTKRLPRMELLQLIILHMVKTEVGTYLASNIFVQICDCFLQ-QAANRNDQ-AK 239
ILR+ML+ + ++L+L+++HMVKTE+GT LASN VQ+CD F++ RN
Sbjct: 151 SILRIMLEKGYVLTSDVLRLVVMHMVKTEIGTCLASNYLVQVCDRFVEFNVGKRNSSPGN 210
Query: 240 LMKPDTMIFNLMLHACVEFRLSFKGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDL 299
++KPDT++FNL+L +CV F S KGQ+L+ELM++ VVADA++IV+++ IY+MNG RD+L
Sbjct: 211 VVKPDTVLFNLVLGSCVRFGFSLKGQELIELMAKVDVVADAYSIVIMSCIYEMNGMRDEL 270
Query: 300 KSFKIHIDQVSPALFFHYYQFYDSLLSLHFKFDDFDSAANLVLEICRFGESPSIQKHWRD 359
+ FK HI QV P L HY F+D+LLSL FKFDD SA L L++C+ S++ D
Sbjct: 271 RKFKEHIGQVPPQLLGHYQHFFDNLLSLEFKFDDIGSAGRLALDMCKSKVLVSVENLGFD 330
Query: 360 LHKSSLVPIGSHHLKNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTLARLI 419
K ++P+GSHH+++GLKI I P+LLQRDS L V+ + F+NY N KL TNKTLA+L+
Sbjct: 331 SEKPRVLPVGSHHIRSGLKIHISPKLLQRDSSLGVDTEATFVNYSNSKLGITNKTLAKLV 390
Query: 420 IEFKRLAKTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVESAGS 479
+KR ELS+LL S+ GS LC+ V+ AC+ +GWLE AHDILDD+ SAG
Sbjct: 391 YGYKRHDNLPELSKLLF-------SLGGSRLCADVIDACVAIGWLEAAHDILDDMNSAGY 450
Query: 480 AVDSAAYFLLLKAYYNQEMLREADVLQKQMAKAGLSTATTEDMANRSLLHENEPTTHDTS 539
++ A Y ++L YY +MLR A+VL KQM KAGL T + ++ E + + +T
Sbjct: 451 PMELATYRMVLSGYYKSKMLRNAEVLLKQMTKAGLITDPSNEIVVSPETEEKD--SENTE 510
Query: 540 LVESLIQEME--ETSAVSPRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTAQTFA 599
L + L+QE+ + +++ NSS+Y+FCKAKM DAL Y+++ + I PT Q+F
Sbjct: 511 LRDLLVQEINAGKQMKAPSMLYELNSSLYYFCKAKMQGDALITYRKIPKMKIPPTVQSFW 570
Query: 600 NLAFGFYSLQMHRDITILWGDIKRSMQSRSLVLNRDLYEFLLLCFLEGGYFERVMEIVGH 659
L + SL M+R+ITI+WGDIKR++ S++L +DL E L++ FL GGYFERVME++ +
Sbjct: 571 ILIDMYSSLGMYREITIVWGDIKRNIASKNLKTTQDLLEKLVVNFLRGGYFERVMELISY 630
Query: 660 MEEQNMYTDKGMYKNQFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGI 710
M+E +MY D MYKN++LKLHKNLYR+LK S+A TEAQ +RLE+V+ F+K VGI
Sbjct: 631 MKENDMYNDLTMYKNEYLKLHKNLYRTLKASDAVTEAQAQRLEHVKTFRKLVGI 673
BLAST of Lcy02g015890 vs. ExPASy Swiss-Prot
Match:
Q9SA60 (Pentatricopeptide repeat-containing protein At1g03100, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g03100 PE=2 SV=1)
HSP 1 Score: 302.8 bits (774), Expect = 1.1e-80
Identity = 204/698 (29.23%), Postives = 354/698 (50.72%), Query Frame = 0
Query: 86 AVLLGKLETALKDHQIDEAWEFFNDFRRLYGFPKDNVLLVLVSQLSYASDCKWLQKACNL 145
A L +++ A+ +H+ DEAW F ++ GFP+ +V+ +V + + D WLQK +L
Sbjct: 96 AKLNEEIQIAVDEHRCDEAWRLFEQHMQMEGFPRKSVVNNVVVCFAESLDSNWLQKGYSL 155
Query: 146 VLQIWKE-KPVVLQLDALTKLGLGLARSQMPIPASEILRLMLQTKRLPRMELLQLIILHM 205
V Q ++E K +L+ + L L L LA+S M +PAS ILR +++T+ P + ++ HM
Sbjct: 156 VEQAYEEGKQNLLEKEPLLYLSLALAKSGMAVPASTILRKLVETEEYPHVSAWSAVLAHM 215
Query: 206 VKTEVGTYLASNIFVQICDCF----LQQAANRNDQAKLMKPDTMIFNLMLHACVEFRLSF 265
G+YL++ + ++I F + N MKP+T + N+ L C+ F +
Sbjct: 216 SLAGSGSYLSAELVLEIGYLFHNNRVDPRKKSNAPLLAMKPNTQVLNVALAGCLLFGTTR 275
Query: 266 KGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDLKSFKIHIDQVSPALFFHYYQFYD 325
K +QL++++ + GV ADA+ +V++A IY+ NG+R++L+ + HID+ ++QFY+
Sbjct: 276 KAEQLLDMIPKIGVKADANLLVIMAHIYERNGRREELRKLQRHIDEACNLNESQFWQFYN 335
Query: 326 SLLSLHFKFDDFDSAANLVLEICR-----------------------------FGESPSI 385
LL H KF D +SA+ +VLE+ R G+ +
Sbjct: 336 CLLMCHLKFGDLESASKMVLEMLRRGKVARNSLGAAILEFDTADDGRLYTKRVSGKGSEV 395
Query: 386 QKH----WRDLHKSSLVPIGSHHL-KNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKL 445
++H R + S++P + LK++ + + + + V+ E I + G L
Sbjct: 396 KEHDNPETRVVSIHSMIPYDEFSRDRKFLKLEAEAKDVLGALLAKLHVQVELITSERGVL 455
Query: 446 VATNKTLARLIIEFKRLAKTSELSQLLLQVQEGLASVEGSN-LCSAVVKACIYLGWLETA 505
T + +L F K EL++ LL+ + + V N + V+ ACI LG L+ A
Sbjct: 456 QPTEEIYVKLAKAFLESGKMKELAKFLLKAEHEDSPVSSDNSMLINVINACISLGMLDQA 515
Query: 506 HDILDDVESAGSAVDSAAYFLLLKAYYNQEMLREADVLQKQMAKAGLSTATT-------- 565
HD+LD++ AG S+ Y LLKAY N RE L + KAG+ ++
Sbjct: 516 HDLLDEMRMAGVRTGSSVYSSLLKAYCNTNQTREVTSLLRDAQKAGIQLDSSCYEALIQS 575
Query: 566 --------------EDMANRSLLHENEPT----------THDTSLVESLIQEMEETSAVS 625
++M +L + L+ L++E+ E ++
Sbjct: 576 QVIQNDTHGALNVFKEMKEAKILRGGNQKFEKLLKGCEGNAEAGLMSKLLREIREVQSLD 635
Query: 626 PRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTAQTFANLAFGFYSL-QMHRDITI 685
VH +N+ I+FF K +++DA +A KRM+ G P AQTF ++ G+ ++ + ++T
Sbjct: 636 AGVHDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVTGYAAIGSKYTEVTE 695
Query: 686 LWGDIKR-SMQSRSLVLNRDLYEFLLLCFLEGGYFERVMEIVGHMEEQNMYTDKGMYKNQ 710
LWG++K + + S+ +++L + +L F+ GG+F R E+V ME++NM+ DK Y+
Sbjct: 696 LWGEMKSIAAATSSMKFDQELLDAVLYTFVRGGFFSRANEVVEMMEKKNMFVDKYKYRML 755
BLAST of Lcy02g015890 vs. ExPASy Swiss-Prot
Match:
Q9SF38 (Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF152 PE=2 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 7.9e-20
Identity = 146/703 (20.77%), Postives = 282/703 (40.11%), Query Frame = 0
Query: 96 LKDHQIDEAWEFFNDFRRLYGFPKDNVLLVLVSQLSYASDCKWLQKACNLVLQIWKEKPV 155
L++ + DEAW + L P L LVSQLSY S + L +A +++ ++ E+ +
Sbjct: 92 LRNRKTDEAWAKYVQSTHL---PGPTCLSRLVSQLSYQSKPESLTRAQSILTRLRNERQL 151
Query: 156 -VLQLDALTKLGLGLARSQMPIPASEILRLMLQTKRLPRMELLQLIILHM-VKTEVGTYL 215
L ++L L + A+S + A +++ M+++ LP ++ + + + G
Sbjct: 152 HRLDANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEE 211
Query: 216 ASNIFVQICDCFLQQAANRNDQAKL--MKPDTMIFNLMLHACVEFRLSFKGQQLVELMSQ 275
+ +F+ I ++ DQ+ + +PDT FN +L+AC + K +L E MS+
Sbjct: 212 SIKLFIAI----TRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSE 271
Query: 276 TGVVADAHTIVLIARIYDMNGQRDDLKSFKIH--IDQVSPALFFHYYQFYDSLLSLHFKF 335
D T ++ ++ G R +L F + ID+ + SL++ + F
Sbjct: 272 WDCEPDVLTYNVMIKLCARVG-RKELIVFVLERIIDKGIKVCMTTMH----SLVAAYVGF 331
Query: 336 DDFDSAANLV-------LEICR------------------------FGESPSIQKHWRD- 395
D +A +V ++C+ F + RD
Sbjct: 332 GDLRTAERIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDE 391
Query: 396 LHKSSLVPIGSHHLKNGL----KIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTL 455
+ + +V + L N + + ++P++ DS + + ++ KNG++ T + L
Sbjct: 392 VSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYM--KNGRVADTARML 451
Query: 456 ARLIIEFKRLAKTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVE 515
+ + R + E++ + VV A + G ++ A +L ++
Sbjct: 452 EAMRRQDDRNSHPDEVTY------------------TTVVSAFVNAGLMDRARQVLAEMA 511
Query: 516 SAGSAVDSAAYFLLLKAYYNQ-EMLREADVLQKQMAKAGLSTATTE-----------DMA 575
G + Y +LLK Y Q ++ R D+L++ AG+ D +
Sbjct: 512 RMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDS 571
Query: 576 NRSLLHENEPTTH--------------------DTSLVESLIQEMEETSAVSPRVHKFNS 635
+L NE T L + EM V + +N
Sbjct: 572 AGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNM 631
Query: 636 SIYFFCKAKMIEDALQAYKRMQQTGIQPTAQTFANLAFGFYSLQMHRDITILWGDIKRSM 695
+ +C+ +IEDA + RM++ G P T+ +LA G + D +LW +IK
Sbjct: 632 LVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERC 691
Query: 696 QSRS---------------LVLNRDLYEFLLLCFLEGGYFERVMEIVGHMEEQNMYTDKG 710
+ L + L + L + +F++ +EI+ MEE + +K
Sbjct: 692 AVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKT 751
BLAST of Lcy02g015890 vs. ExPASy Swiss-Prot
Match:
Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)
HSP 1 Score: 61.2 bits (147), Expect = 5.3e-08
Identity = 53/220 (24.09%), Postives = 96/220 (43.64%), Query Frame = 0
Query: 450 SAVVKACIYLGWLETAHDILDDVESAGSAVDSAAYFLLLKAYYNQEMLREADVLQKQMAK 509
+ +++ Y G + +L D+ D A+ L+ + + LREA+ L K+M +
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 510 AGLSTAT-TEDMANRSLLHENEPTTHDTSLVESLIQEMEETSAVSPRVHKFNSSIYFFCK 569
G+S T T EN+ + L ++ + P + FN I +CK
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHML------DLMVSKGCGPNIRTFNILINGYCK 405
Query: 570 AKMIEDALQAYKRMQQTGIQPTAQTFANLAFGFYSLQMHRDITILWGDIKRSMQSRSLVL 629
A +I+D L+ +++M G+ T+ L GF L + ++ + M SR +
Sbjct: 406 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE----VAKELFQEMVSRRVRP 465
Query: 630 NRDLYEFLLLCFLEGGYFERVMEIVGHMEEQNMYTDKGMY 669
+ Y+ LL + G E+ +EI +E+ M D G+Y
Sbjct: 466 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
BLAST of Lcy02g015890 vs. ExPASy Swiss-Prot
Match:
Q84ZD2 (Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0548300 PE=3 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 5.9e-07
Identity = 53/212 (25.00%), Postives = 96/212 (45.28%), Query Frame = 0
Query: 450 SAVVKACIYLGWLETAHDILDDVESAGSAVDSAAYFLLLKAYYNQEMLREADVLQKQMAK 509
+A++K + +G L+ A +LD++ G A D A Y LL+ AY A +L K+M
Sbjct: 296 NALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEA 355
Query: 510 AGLSTATTEDMANRSLLHENEPTTHDTSLVESLIQEMEETSAVSPRVHKFNSSIYFFCKA 569
G+ ++ + +R L + + ++++EM S V P H +N I F K
Sbjct: 356 DGVKPSSY--VFSRILAGFRDRGEWQKAF--AVLREM-HASGVRPDRHFYNVMIDTFGKY 415
Query: 570 KMIEDALQAYKRMQQTGIQPTAQTFANLAFGFYSLQMHRDITILWGDIKRSMQSRSLVLN 629
+ A+ A+ RM++ GI+P T+ L H L+ +++ S + L
Sbjct: 416 NCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRES----NCPLG 475
Query: 630 RDLYEFLLLCFLEGGYFERVMEIVGHMEEQNM 662
Y ++ E +E V ++ M+EQ +
Sbjct: 476 TTTYNIMINLLGEEQRWEGVEAMLAEMKEQGL 498
BLAST of Lcy02g015890 vs. ExPASy TrEMBL
Match:
A0A6J1DVU2 (pentatricopeptide repeat-containing protein At4g17616 OS=Momordica charantia OX=3673 GN=LOC111024534 PE=4 SV=1)
HSP 1 Score: 1136.3 bits (2938), Expect = 0.0e+00
Identity = 584/718 (81.34%), Postives = 637/718 (88.72%), Query Frame = 0
Query: 1 MALILARERLLQSRLSTGFSLKSGLVSALQSSDLISACSEKLIFIKNFVNPRFAELWYIR 60
MALILARERL+QSRL TGFSLKSGLVSAL+ SE LIFI+ F +PR EL Y++
Sbjct: 12 MALILARERLVQSRLWTGFSLKSGLVSALR-------ISENLIFIRIFGSPRVEELLYMK 71
Query: 61 PQIPLIHCVSTSVHATKLCWGGSSYAVLLGKLETALKDHQIDEAWEFFNDFRRLYGFPKD 120
Q L C+STSVH TKL WGGSSY VLLGKLETALKDHQ DEAWE F+DFRRLYGFPKD
Sbjct: 72 SQFRLSRCLSTSVHTTKLSWGGSSYEVLLGKLETALKDHQTDEAWELFDDFRRLYGFPKD 131
Query: 121 NVLLVLVSQLSYASDCKWLQKACNLVLQIWKEKPVVLQLDALTKLGLGLARSQMPIPASE 180
NVLL+LVSQLSY SDC L+KACNLV QIWKEKP+VLQLD LTKL L LARSQMPI AS+
Sbjct: 132 NVLLMLVSQLSYTSDCNKLKKACNLVFQIWKEKPIVLQLDVLTKLALTLARSQMPILASK 191
Query: 181 ILRLMLQTKRLPRMELLQLIILHMVKTEVGTYLASNIFVQICDCFLQQAANRNDQAKLMK 240
ILRLML+TKRLPRMELLQL+ILH VKTEVGTYLASNI VQICDCFLQQ ANRNDQAKLMK
Sbjct: 192 ILRLMLETKRLPRMELLQLVILHKVKTEVGTYLASNILVQICDCFLQQVANRNDQAKLMK 251
Query: 241 PDTMIFNLMLHACVEFRLSFKGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDLKSF 300
PDTM+FNL+ ACV+F+LSFKGQQLVELMSQTGVVADAHTIVLIA+IYDMNGQRDD+ +F
Sbjct: 252 PDTMVFNLVFDACVKFKLSFKGQQLVELMSQTGVVADAHTIVLIAKIYDMNGQRDDIMNF 311
Query: 301 KIHIDQVSPALFFHYYQFYDSLLSLHFKFDDFDSAANLVLEICRFGESPSIQKHWRDLHK 360
KIHIDQVSP+L HY QFYDSLLSLHFKF+DF+SAANLVLE CRFGESP IQKHWRD K
Sbjct: 312 KIHIDQVSPSLVCHYCQFYDSLLSLHFKFNDFESAANLVLETCRFGESPRIQKHWRDSQK 371
Query: 361 SSLVPIGSHHLKNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTLARLIIEF 420
SSL+PIGSHHLK GLKIKIMPELLQ+DSVLNVE KPEFINY NGKLV++ KTL++L+IEF
Sbjct: 372 SSLIPIGSHHLKAGLKIKIMPELLQKDSVLNVEAKPEFINYNNGKLVSSKKTLSKLVIEF 431
Query: 421 KRLAKTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVESAGSAVD 480
KRL KTSELS+LLLQVQ+GLAS EGSNLCSAVVK CIYLGWLE AHDILDDVE+AGSAVD
Sbjct: 432 KRLGKTSELSKLLLQVQKGLASTEGSNLCSAVVKTCIYLGWLEIAHDILDDVETAGSAVD 491
Query: 481 SAAYFLLLKAYYNQEMLREADVLQKQMAKAGLSTATTEDM---------ANRSLLHENEP 540
SA YFLLLKAYYNQEMLREADVLQKQMAK GLST TT DM ANR+ + P
Sbjct: 492 SAVYFLLLKAYYNQEMLREADVLQKQMAKVGLSTDTTADMVSSTYSPKLANRTSSQDXPP 551
Query: 541 TTHDTSLVESLIQEMEETSAVSPRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTA 600
TTH+TSLVESL+QEM+ETSA+SPRV+K NSSIYFFCKAKMIEDALQAYKRMQQ IQPT
Sbjct: 552 TTHETSLVESLVQEMKETSAISPRVYKLNSSIYFFCKAKMIEDALQAYKRMQQISIQPTL 611
Query: 601 QTFANLAFGFYSLQMHRDITILWGDIKRSMQSRSLVLNRDLYEFLLLCFLEGGYFERVME 660
QTFANLAFGF SLQM+RDITILWGD+KR++ SR+ V++R+LYEFLLLCFL+GGYFERVME
Sbjct: 612 QTFANLAFGFSSLQMYRDITILWGDMKRNIGSRNFVMSRELYEFLLLCFLQGGYFERVME 671
Query: 661 IVGHMEEQNMYTDKGMYKNQFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGI 710
I GHMEEQ M+TDKGMYK++FLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGI
Sbjct: 672 IAGHMEEQKMFTDKGMYKSEFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGI 722
BLAST of Lcy02g015890 vs. ExPASy TrEMBL
Match:
A0A0A0LKC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912300 PE=4 SV=1)
HSP 1 Score: 1111.3 bits (2873), Expect = 0.0e+00
Identity = 582/716 (81.28%), Postives = 628/716 (87.71%), Query Frame = 0
Query: 1 MALILARERLLQSRLSTGFSLKSGLVSALQSSDLISACSEKLIFIKNFVNPRFAELWYIR 60
MALILARERLL SRLST F LKS LVSALQS LISAC EKLIF+K F N R ELWY +
Sbjct: 1 MALILARERLLHSRLSTIFPLKSRLVSALQSFALISACREKLIFLKFFGNSRVTELWYTK 60
Query: 61 PQIPLIHCVSTSVHATKLCWGGSSYAVLLGKLETALKDHQIDEAWEFFNDFRRLYGFPKD 120
Q+P CVST VH TKLCWGGSSY VLLGKLE ALKDHQIDEAWE F+DFR+LYGFP D
Sbjct: 61 SQVPFFRCVSTYVHPTKLCWGGSSYDVLLGKLEIALKDHQIDEAWELFSDFRKLYGFPND 120
Query: 121 NVLLVLVSQLSYASDCKWLQKACNLVLQIWKEKPVVLQLDALTKLGLGLARSQMPIPASE 180
N LL+LVSQLSY SDCK L KA NLVLQ WKEKPVVLQLD LTKL LGLARSQMPIPASE
Sbjct: 121 NFLLMLVSQLSYTSDCKRLHKAYNLVLQNWKEKPVVLQLDTLTKLVLGLARSQMPIPASE 180
Query: 181 ILRLMLQTKRLPRMELLQLIILHMVKTEVGTYLASNIFVQICDCFLQQAANRNDQAKLMK 240
ILRLMLQT+RLPRMELLQL+ILHMVK+EVGTYLASNI VQICDCFLQQA +RNDQAK MK
Sbjct: 181 ILRLMLQTRRLPRMELLQLVILHMVKSEVGTYLASNILVQICDCFLQQATSRNDQAKSMK 240
Query: 241 PDTMIFNLMLHACVEFRLSFKGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDLKSF 300
PDTM+FNL+LHACV F+LSFKGQQLVELMSQT VVADAHTIVLIARIY+MN QRD+LK+
Sbjct: 241 PDTMLFNLVLHACVRFKLSFKGQQLVELMSQTEVVADAHTIVLIARIYEMNDQRDELKNL 300
Query: 301 KIHIDQVSPALFFHYYQFYDSLLSLHFKFDDFDSAANLVLEICRFGESPSIQKHWRDLHK 360
K HIDQVSP+L HY QFYD+LLSLHFK+DDFDSAANL+LEICRFGES SIQKHWR+L K
Sbjct: 301 KTHIDQVSPSLVCHYCQFYDALLSLHFKYDDFDSAANLMLEICRFGESNSIQKHWRELQK 360
Query: 361 SSLVPIGSHHLKNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTLARLIIEF 420
SS +PIGS HLK+GLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVA+NKT+A+ I+E
Sbjct: 361 SSFLPIGSRHLKDGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVASNKTVAKFIVEL 420
Query: 421 KRLAKTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVESAGSAVD 480
+R+ +TSELS+LLLQVQ+GLASVEGSNLCS VVKACI LGWLETAHDILDDVE+ GS +D
Sbjct: 421 RRVGETSELSKLLLQVQKGLASVEGSNLCSDVVKACICLGWLETAHDILDDVEAVGSPLD 480
Query: 481 SAAYFLLLKAYYNQEMLREADVLQKQMAKAGLSTATTEDMA------NRSLLHENEPTTH 540
S YFLLLKAYY Q+MLREADVLQKQM K GLS +TTEDMA +R LL E TH
Sbjct: 481 STVYFLLLKAYYKQDMLREADVLQKQMTKVGLSISTTEDMASSTCSSSRILLPNIEVATH 540
Query: 541 DTSLVESLIQEMEETSAVSPRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTAQTF 600
TSLVESLIQEM+ETS++S RV KFNSSIYFFCKAKMIEDALQAYKRMQQ GIQPTAQTF
Sbjct: 541 -TSLVESLIQEMKETSSMS-RVLKFNSSIYFFCKAKMIEDALQAYKRMQQLGIQPTAQTF 600
Query: 601 ANLAFGFYSLQMHRDITILWGDIKRSMQSRSLVLNRDLYEFLLLCFLEGGYFERVMEIVG 660
ANL FGF LQM+R+ITILWGDIKR MQS LVL+RDLYE LLLCF+ GGYFERVMEIVG
Sbjct: 601 ANLVFGFSYLQMYRNITILWGDIKRRMQSTHLVLSRDLYECLLLCFIRGGYFERVMEIVG 660
Query: 661 HMEEQNMYTDKGMYKNQFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGIY 711
MEEQNMYTDK MYK +FL LHKNLYRSLKPSEA+TEAQKKRLE VRAFKKWVGIY
Sbjct: 661 RMEEQNMYTDKRMYKREFLMLHKNLYRSLKPSEAKTEAQKKRLEDVRAFKKWVGIY 714
BLAST of Lcy02g015890 vs. ExPASy TrEMBL
Match:
A0A1S3BZV2 (pentatricopeptide repeat-containing protein At4g17616 OS=Cucumis melo OX=3656 GN=LOC103494998 PE=4 SV=1)
HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 572/719 (79.55%), Postives = 626/719 (87.07%), Query Frame = 0
Query: 1 MALILARERLLQSRLSTGFSLKSGLVSALQSSDLI---SACSEKLIFIKNFVNPRFAELW 60
MALILARE LL SRLST F L+S LVSALQS LI SACS+KLI + F N ELW
Sbjct: 1 MALILARESLLHSRLSTIFPLQSSLVSALQSFALISAKSACSKKLILLNFFGNSTVTELW 60
Query: 61 YIRPQIPLIHCVSTSVHATKLCWGGSSYAVLLGKLETALKDHQIDEAWEFFNDFRRLYGF 120
+ QIP CVSTSVH TKLCWGGSSY VLLGKLE ALKDHQIDEAWE F+DFRRLYGF
Sbjct: 61 NTKSQIPFFRCVSTSVHPTKLCWGGSSYDVLLGKLEIALKDHQIDEAWELFSDFRRLYGF 120
Query: 121 PKDNVLLVLVSQLSYASDCKWLQKACNLVLQIWKEKPVVLQLDALTKLGLGLARSQMPIP 180
P D LL+LVSQLSY SDCK L KA NLVLQ WKEKPVVLQLD LTKLGLGLARSQMPIP
Sbjct: 121 PNDKFLLMLVSQLSYTSDCKRLHKAYNLVLQNWKEKPVVLQLDTLTKLGLGLARSQMPIP 180
Query: 181 ASEILRLMLQTKRLPRMELLQLIILHMVKTEVGTYLASNIFVQICDCFLQQAANRNDQAK 240
ASEILRLML T+RLPRMELLQL+ILHMVK+EVGTYLASNI VQICDCFLQQAA+R+DQAK
Sbjct: 181 ASEILRLMLHTRRLPRMELLQLVILHMVKSEVGTYLASNILVQICDCFLQQAASRDDQAK 240
Query: 241 LMKPDTMIFNLMLHACVEFRLSFKGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDL 300
M+PDTM+FNL+LHACV F+LS KGQQLVELMSQT VVADAHTIVLIARIY+MNGQRD+L
Sbjct: 241 SMEPDTMLFNLLLHACVRFKLSLKGQQLVELMSQTEVVADAHTIVLIARIYEMNGQRDEL 300
Query: 301 KSFKIHIDQVSPALFFHYYQFYDSLLSLHFKFDDFDSAANLVLEICRFGESPSIQKHWRD 360
K+ K HIDQV P+L HYYQFYD+LLSLHFK+DDFDSAANL+LEICRFGES SIQKHWR+
Sbjct: 301 KNLKTHIDQV-PSLVCHYYQFYDALLSLHFKYDDFDSAANLMLEICRFGESKSIQKHWRE 360
Query: 361 LHKSSLVPIGSHHLKNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTLARLI 420
L KSS +PIGS HLK+GLKIK+MPELLQ+DSVLNVEVKPEFINYKNGKLVA+NKT+A+ I
Sbjct: 361 LQKSSFLPIGSRHLKDGLKIKMMPELLQKDSVLNVEVKPEFINYKNGKLVASNKTIAKFI 420
Query: 421 IEFKRLAKTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVESAGS 480
+E +R+ +TSELS+LLLQVQ+GLASVEGSNLCS VVKACI LGWLETAHD+LDDVE+ GS
Sbjct: 421 VELRRVGETSELSKLLLQVQKGLASVEGSNLCSDVVKACICLGWLETAHDVLDDVEAVGS 480
Query: 481 AVDSAAYFLLLKAYYNQEMLREADVLQKQMAKAGLSTATTEDM------ANRSLLHENEP 540
+DSA YFLLLKAYY Q+MLREADVLQKQM K GLS +TT+DM ++R LL E
Sbjct: 481 PMDSAVYFLLLKAYYKQDMLREADVLQKQMTKVGLSISTTKDMTSSMCSSSRILLPNIEG 540
Query: 541 TTHDTSLVESLIQEMEETSAVSPRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTA 600
TH TSLVESLIQEM+ETS+VS V KFNSSIYFFCKAKMIEDALQAYKRMQQ GIQPTA
Sbjct: 541 ATH-TSLVESLIQEMKETSSVS-GVLKFNSSIYFFCKAKMIEDALQAYKRMQQLGIQPTA 600
Query: 601 QTFANLAFGFYSLQMHRDITILWGDIKRSMQSRSLVLNRDLYEFLLLCFLEGGYFERVME 660
QTFANL FGF SLQM+ +ITILWGD+KR MQS LVL+RDLYE LLLCFL GGYFERVME
Sbjct: 601 QTFANLVFGFSSLQMYINITILWGDMKRRMQSVDLVLSRDLYECLLLCFLRGGYFERVME 660
Query: 661 IVGHMEEQNMYTDKGMYKNQFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGIY 711
IVG MEEQNMYTDKGMYK +FL LHKNLYRSLKPSEA++EAQKKRLE VRAFKKWVG+Y
Sbjct: 661 IVGRMEEQNMYTDKGMYKREFLMLHKNLYRSLKPSEAKSEAQKKRLEDVRAFKKWVGMY 716
BLAST of Lcy02g015890 vs. ExPASy TrEMBL
Match:
A0A5D3BA19 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001530 PE=4 SV=1)
HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 572/719 (79.55%), Postives = 626/719 (87.07%), Query Frame = 0
Query: 1 MALILARERLLQSRLSTGFSLKSGLVSALQSSDLI---SACSEKLIFIKNFVNPRFAELW 60
MALILARE LL SRLST F L+S LVSALQS LI SACS+KLI + F N ELW
Sbjct: 1 MALILARESLLHSRLSTIFPLQSSLVSALQSFALISAKSACSKKLILLNFFGNSTVTELW 60
Query: 61 YIRPQIPLIHCVSTSVHATKLCWGGSSYAVLLGKLETALKDHQIDEAWEFFNDFRRLYGF 120
+ QIP CVSTSVH TKLCWGGSSY VLLGKLE ALKDHQIDEAWE F+DFRRLYGF
Sbjct: 61 NTKSQIPFFRCVSTSVHPTKLCWGGSSYDVLLGKLEIALKDHQIDEAWELFSDFRRLYGF 120
Query: 121 PKDNVLLVLVSQLSYASDCKWLQKACNLVLQIWKEKPVVLQLDALTKLGLGLARSQMPIP 180
P D LL+LVSQLSY SDCK L KA NLVLQ WKEKPVVLQLD LTKLGLGLARSQMPIP
Sbjct: 121 PNDKFLLMLVSQLSYTSDCKRLHKAYNLVLQNWKEKPVVLQLDTLTKLGLGLARSQMPIP 180
Query: 181 ASEILRLMLQTKRLPRMELLQLIILHMVKTEVGTYLASNIFVQICDCFLQQAANRNDQAK 240
ASEILRLML T+RLPRMELLQL+ILHMVK+EVGTYLASNI VQICDCFLQQAA+R+DQAK
Sbjct: 181 ASEILRLMLHTRRLPRMELLQLVILHMVKSEVGTYLASNILVQICDCFLQQAASRDDQAK 240
Query: 241 LMKPDTMIFNLMLHACVEFRLSFKGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDL 300
M+PDTM+FNL+LHACV F+LS KGQQLVELMSQT VVADAHTIVLIARIY+MNGQRD+L
Sbjct: 241 SMEPDTMLFNLLLHACVRFKLSLKGQQLVELMSQTEVVADAHTIVLIARIYEMNGQRDEL 300
Query: 301 KSFKIHIDQVSPALFFHYYQFYDSLLSLHFKFDDFDSAANLVLEICRFGESPSIQKHWRD 360
K+ K HIDQV P+L HYYQFYD+LLSLHFK+DDFDSAANL+LEICRFGES SIQKHWR+
Sbjct: 301 KNLKTHIDQV-PSLVCHYYQFYDALLSLHFKYDDFDSAANLMLEICRFGESKSIQKHWRE 360
Query: 361 LHKSSLVPIGSHHLKNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTLARLI 420
L KSS +PIGS HLK+GLKIK+MPELLQ+DSVLNVEVKPEFINYKNGKLVA+NKT+A+ I
Sbjct: 361 LQKSSFLPIGSRHLKDGLKIKMMPELLQKDSVLNVEVKPEFINYKNGKLVASNKTIAKFI 420
Query: 421 IEFKRLAKTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVESAGS 480
+E +R+ +TSELS+LLLQVQ+GLASVEGSNLCS VVKACI LGWLETAHD+LDDVE+ GS
Sbjct: 421 VELRRVGETSELSKLLLQVQKGLASVEGSNLCSDVVKACICLGWLETAHDVLDDVEAVGS 480
Query: 481 AVDSAAYFLLLKAYYNQEMLREADVLQKQMAKAGLSTATTEDM------ANRSLLHENEP 540
+DSA YFLLLKAYY Q+MLREADVLQKQM K GLS +TT+DM ++R LL E
Sbjct: 481 PMDSAVYFLLLKAYYKQDMLREADVLQKQMTKVGLSISTTKDMTSSMCSSSRILLPNIEG 540
Query: 541 TTHDTSLVESLIQEMEETSAVSPRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTA 600
TH TSLVESLIQEM+ETS+VS V KFNSSIYFFCKAKMIEDALQAYKRMQQ GIQPTA
Sbjct: 541 ATH-TSLVESLIQEMKETSSVS-GVLKFNSSIYFFCKAKMIEDALQAYKRMQQLGIQPTA 600
Query: 601 QTFANLAFGFYSLQMHRDITILWGDIKRSMQSRSLVLNRDLYEFLLLCFLEGGYFERVME 660
QTFANL FGF SLQM+ +ITILWGD+KR MQS LVL+RDLYE LLLCFL GGYFERVME
Sbjct: 601 QTFANLVFGFSSLQMYINITILWGDMKRRMQSVDLVLSRDLYECLLLCFLRGGYFERVME 660
Query: 661 IVGHMEEQNMYTDKGMYKNQFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGIY 711
IVG MEEQNMYTDKGMYK +FL LHKNLYRSLKPSEA++EAQKKRLE VRAFKKWVG+Y
Sbjct: 661 IVGRMEEQNMYTDKGMYKREFLMLHKNLYRSLKPSEAKSEAQKKRLEDVRAFKKWVGMY 716
BLAST of Lcy02g015890 vs. ExPASy TrEMBL
Match:
A0A6J1H461 (pentatricopeptide repeat-containing protein At4g17616 OS=Cucurbita moschata OX=3662 GN=LOC111459829 PE=4 SV=1)
HSP 1 Score: 982.6 bits (2539), Expect = 8.4e-283
Identity = 495/582 (85.05%), Postives = 542/582 (93.13%), Query Frame = 0
Query: 125 VLVSQLSYASDCKWLQKACNLVLQIWKEKPVVLQLDALTKLGLGLARSQMPIPASEILRL 184
+L+SQLSY DC WLQKACNLVLQIWKEKPVVLQL+ALTKL LGLARSQMPIPASE+LRL
Sbjct: 1 MLISQLSYTFDCNWLQKACNLVLQIWKEKPVVLQLNALTKLTLGLARSQMPIPASEMLRL 60
Query: 185 MLQTKRLPRMELLQLIILHMVKTEVGTYLASNIFVQICDCFLQQAANRNDQAKLMKPDTM 244
MLQ KRLP+MELLQ++I+HMVKTEVGTYLASNI VQICDCF QQ A+RNDQAK MKPDT+
Sbjct: 61 MLQIKRLPQMELLQMVIMHMVKTEVGTYLASNILVQICDCFSQQTASRNDQAKSMKPDTV 120
Query: 245 IFNLMLHACVEFRLSFKGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDLKSFKIHI 304
IFNL+LHACV FRLSFKGQQLVELMS+TGVVADA TIVLIARIYDMNGQRDDLK+FK+HI
Sbjct: 121 IFNLVLHACVGFRLSFKGQQLVELMSRTGVVADAQTIVLIARIYDMNGQRDDLKNFKMHI 180
Query: 305 DQVSPALFFHYYQFYDSLLSLHFKFDDFDSAANLVLEICRFGESPSIQKHWRDLHKSSLV 364
DQVSP+L HY FYDSLLSLHFKFD+FDSA NLVLEICRFG+S SIQK W D KSSLV
Sbjct: 181 DQVSPSLVCHYCHFYDSLLSLHFKFDNFDSATNLVLEICRFGDSRSIQKRWMDFQKSSLV 240
Query: 365 PIGSHHLKNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTLARLIIEFKRLA 424
PIGS HLK+GLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVA+NKTLA+LI+EFKRL
Sbjct: 241 PIGSPHLKDGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVASNKTLAKLIVEFKRLG 300
Query: 425 KTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVESAGSAVDSAAY 484
KTSELS+LLLQVQ+GLASV+GSNLCS VVKACIYLGWLETAHDILDD+E AGSA+DSA Y
Sbjct: 301 KTSELSKLLLQVQKGLASVKGSNLCSDVVKACIYLGWLETAHDILDDIEVAGSAMDSAVY 360
Query: 485 FLLLKAYYNQEMLREADVLQKQMAKAGLSTATTEDMANRSLLHENEPTTHDTSLVESLIQ 544
FLLL+AYY QEMLREADVLQKQMAKAGLSTA EDMAN+S+LHENEP THDTSL ES++Q
Sbjct: 361 FLLLEAYYKQEMLREADVLQKQMAKAGLSTAMAEDMANQSMLHENEPNTHDTSLTESIVQ 420
Query: 545 EMEETSAVSPRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTAQTFANLAFGFYSL 604
EMEETS +SPRV+KFNSSIYFFCKAKM+EDAL AYKRMQQTGIQPTA+TFA+LAFGF SL
Sbjct: 421 EMEETSGLSPRVYKFNSSIYFFCKAKMVEDALHAYKRMQQTGIQPTARTFADLAFGFSSL 480
Query: 605 QMHRDITILWGDIKRSMQSRSLVLNRDLYEFLLLCFLEGGYFERVMEIVGHMEEQNMYTD 664
Q +RDIT LWGD+KR+MQS+ LVL+RDLYEFLLLCFL GGYFERVME+VGHMEEQ M+TD
Sbjct: 481 QRYRDITFLWGDMKRNMQSKGLVLSRDLYEFLLLCFLRGGYFERVMEVVGHMEEQKMFTD 540
Query: 665 KGMYKNQFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKW 707
KGMYK+Q+LKLHKNLYRSLKPSEARTEAQK RLE+VRAFK+W
Sbjct: 541 KGMYKDQYLKLHKNLYRSLKPSEARTEAQKNRLEHVRAFKQW 582
BLAST of Lcy02g015890 vs. NCBI nr
Match:
XP_023534668.1 (pentatricopeptide repeat-containing protein At4g17616 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1170.2 bits (3026), Expect = 0.0e+00
Identity = 598/710 (84.23%), Postives = 646/710 (90.99%), Query Frame = 0
Query: 1 MALILARERLLQSRLSTGFSLKSGLVSALQSSDLISACSEKLIFIKNFVNPRFAELWYIR 60
MALILARERLLQSR+ TGFSLKSGLVSALQSS ISACSEKL FIK VNP FAEL IR
Sbjct: 1 MALILARERLLQSRVLTGFSLKSGLVSALQSSASISACSEKLFFIKKLVNPGFAELCCIR 60
Query: 61 PQIPLIHCVSTSVHATKLCWGGSSYAVLLGKLETALKDHQIDEAWEFFNDFRRLYGFPKD 120
CV TSV+ T LCWGGSS+ VLLGKLE AL+DHQIDEAWE FNDFRRLYGFPKD
Sbjct: 61 ----FCRCVHTSVNTTTLCWGGSSHTVLLGKLEIALRDHQIDEAWELFNDFRRLYGFPKD 120
Query: 121 NVLLVLVSQLSYASDCKWLQKACNLVLQIWKEKPVVLQLDALTKLGLGLARSQMPIPASE 180
N+LL+L+SQLSY DC WLQKACNLVLQIWKEKPVVLQL+ALTKL LGLARSQMPIPASE
Sbjct: 121 NILLMLISQLSYTFDCNWLQKACNLVLQIWKEKPVVLQLNALTKLTLGLARSQMPIPASE 180
Query: 181 ILRLMLQTKRLPRMELLQLIILHMVKTEVGTYLASNIFVQICDCFLQQAANRNDQAKLMK 240
+LRLMLQ KRLP+MELLQ+II+HMVKTEVGTYLASNI VQICDCF QQAA+RNDQAK MK
Sbjct: 181 MLRLMLQIKRLPQMELLQMIIMHMVKTEVGTYLASNILVQICDCFSQQAASRNDQAKSMK 240
Query: 241 PDTMIFNLMLHACVEFRLSFKGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDLKSF 300
PDT IFNL+LHACV FRLSFKGQQLVELMS+TGVVA+A TIVLIARIYDMNGQRDDLK+F
Sbjct: 241 PDTGIFNLVLHACVRFRLSFKGQQLVELMSRTGVVAEAQTIVLIARIYDMNGQRDDLKNF 300
Query: 301 KIHIDQVSPALFFHYYQFYDSLLSLHFKFDDFDSAANLVLEICRFGESPSIQKHWRDLHK 360
K+HIDQVSP L HY FYDSLLSLHFKFD+FDSA NLVLEICRFG+S SIQK W D K
Sbjct: 301 KMHIDQVSPLLVCHYCHFYDSLLSLHFKFDNFDSATNLVLEICRFGDSRSIQKRWMDFQK 360
Query: 361 SSLVPIGSHHLKNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTLARLIIEF 420
SSLVPIGS HLK+GLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVA+NKTLA+LI+EF
Sbjct: 361 SSLVPIGSPHLKDGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVASNKTLAKLIVEF 420
Query: 421 KRLAKTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVESAGSAVD 480
KRL KTSELS+LLLQVQ+GLASV+GSNLCS VVKACIYLGWLETAHDILDD+E AGSA+
Sbjct: 421 KRLGKTSELSKLLLQVQKGLASVKGSNLCSDVVKACIYLGWLETAHDILDDIEVAGSAMG 480
Query: 481 SAAYFLLLKAYYNQEMLREADVLQKQMAKAGLSTATTEDMANRSLLHENEPTTHDTSLVE 540
SA YFLLL+AYY QEMLREADVLQKQMAKAGLSTA EDMANRSLLHENEP THDT L E
Sbjct: 481 SAVYFLLLEAYYKQEMLREADVLQKQMAKAGLSTAMAEDMANRSLLHENEPKTHDTPLAE 540
Query: 541 SLIQEMEETSAVSPRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTAQTFANLAFG 600
S++QEMEETS +S RV+KFNSSIYFFCKAKM+EDALQAYKRMQQTGIQPTA+TFA+LAFG
Sbjct: 541 SIVQEMEETSGISSRVYKFNSSIYFFCKAKMVEDALQAYKRMQQTGIQPTARTFADLAFG 600
Query: 601 FYSLQMHRDITILWGDIKRSMQSRSLVLNRDLYEFLLLCFLEGGYFERVMEIVGHMEEQN 660
F SLQ +RDIT LWGD+KR+MQS+ LVL+RDLYEFLLLCFL+GGYFERVME+VGHMEEQ
Sbjct: 601 FSSLQRYRDITFLWGDMKRNMQSKGLVLSRDLYEFLLLCFLQGGYFERVMEVVGHMEEQK 660
Query: 661 MYTDKGMYKNQFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGIY 711
M+TDKGMYK+Q+LKLHKNLYRSLKPSEARTEAQK RLE+VRAFKKWVGIY
Sbjct: 661 MFTDKGMYKDQYLKLHKNLYRSLKPSEARTEAQKNRLEHVRAFKKWVGIY 706
BLAST of Lcy02g015890 vs. NCBI nr
Match:
KAG6606214.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1163.3 bits (3008), Expect = 0.0e+00
Identity = 593/710 (83.52%), Postives = 648/710 (91.27%), Query Frame = 0
Query: 1 MALILARERLLQSRLSTGFSLKSGLVSALQSSDLISACSEKLIFIKNFVNPRFAELWYIR 60
MALILARERLLQSR+ TGFSLKSGLVSA QSS ISACSEKL FIK FVNP FAEL IR
Sbjct: 1 MALILARERLLQSRVLTGFSLKSGLVSAPQSSASISACSEKL-FIKKFVNPGFAELCCIR 60
Query: 61 PQIPLIHCVSTSVHATKLCWGGSSYAVLLGKLETALKDHQIDEAWEFFNDFRRLYGFPKD 120
CV TSV+ T LCWGGSS+AVLLGKLE AL+DHQID+AWE FNDF+RLYGFPKD
Sbjct: 61 ----FFRCVHTSVNTTTLCWGGSSHAVLLGKLEIALRDHQIDDAWELFNDFKRLYGFPKD 120
Query: 121 NVLLVLVSQLSYASDCKWLQKACNLVLQIWKEKPVVLQLDALTKLGLGLARSQMPIPASE 180
NVLL+L+SQLSY DC WLQKACNLVLQIWKEKPVVLQL+ALTKL LGLARSQMPIPASE
Sbjct: 121 NVLLMLISQLSYTFDCNWLQKACNLVLQIWKEKPVVLQLNALTKLTLGLARSQMPIPASE 180
Query: 181 ILRLMLQTKRLPRMELLQLIILHMVKTEVGTYLASNIFVQICDCFLQQAANRNDQAKLMK 240
+LRLMLQ KRLP+MELLQ++I+HMVKTEVGTYLASNI VQICDCF QQ A+RNDQAK MK
Sbjct: 181 MLRLMLQIKRLPQMELLQMVIMHMVKTEVGTYLASNILVQICDCFSQQTASRNDQAKSMK 240
Query: 241 PDTMIFNLMLHACVEFRLSFKGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDLKSF 300
PDT+IFNL+LHACV FRLSFKGQQLVELMS+TGVVADA TIVLIARIYDMNGQRDDLK+F
Sbjct: 241 PDTVIFNLVLHACVGFRLSFKGQQLVELMSRTGVVADAQTIVLIARIYDMNGQRDDLKNF 300
Query: 301 KIHIDQVSPALFFHYYQFYDSLLSLHFKFDDFDSAANLVLEICRFGESPSIQKHWRDLHK 360
K+HIDQVSP+L HY FYDSLLSLHFKFD+FDSA NLVLEICRFG+S SIQK W D K
Sbjct: 301 KMHIDQVSPSLVCHYCHFYDSLLSLHFKFDNFDSATNLVLEICRFGDSRSIQKRWMDFQK 360
Query: 361 SSLVPIGSHHLKNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTLARLIIEF 420
SSLVPIGS HLK+GLKIKIMPELLQRDSVLN EVKPE INYKNGKLVA+NKTLA+LI+EF
Sbjct: 361 SSLVPIGSPHLKDGLKIKIMPELLQRDSVLNFEVKPELINYKNGKLVASNKTLAKLIVEF 420
Query: 421 KRLAKTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVESAGSAVD 480
KRL +TSELS+LLL+VQ+GLASV+GSNLCS VVKACIYLGWLETAHDILDD+E AGSA+D
Sbjct: 421 KRLGRTSELSKLLLEVQKGLASVKGSNLCSDVVKACIYLGWLETAHDILDDIEVAGSAMD 480
Query: 481 SAAYFLLLKAYYNQEMLREADVLQKQMAKAGLSTATTEDMANRSLLHENEPTTHDTSLVE 540
SA YFLLL+AYY QEMLREADVLQKQMAKAGL TA EDMANRS+LHENEP THDTSL E
Sbjct: 481 SAVYFLLLEAYYKQEMLREADVLQKQMAKAGLPTAMVEDMANRSMLHENEPNTHDTSLAE 540
Query: 541 SLIQEMEETSAVSPRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTAQTFANLAFG 600
S++QEMEETS +SPRV+KFNSSIYFFCKAKM+EDALQAYKRMQQTGIQPTA+TFA+LAFG
Sbjct: 541 SIVQEMEETSGLSPRVYKFNSSIYFFCKAKMVEDALQAYKRMQQTGIQPTARTFADLAFG 600
Query: 601 FYSLQMHRDITILWGDIKRSMQSRSLVLNRDLYEFLLLCFLEGGYFERVMEIVGHMEEQN 660
F SLQ +RDIT LWGD+KR+MQS+ LVL+RDLYEFLLLCFL+GGYFERVME+VGHMEEQ
Sbjct: 601 FSSLQRYRDITFLWGDMKRNMQSKGLVLSRDLYEFLLLCFLQGGYFERVMEVVGHMEEQK 660
Query: 661 MYTDKGMYKNQFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGIY 711
M+TDKGMYK+Q+LKLHKNLYRSLKPSEARTEAQK RL++VRAFKKWVGIY
Sbjct: 661 MFTDKGMYKDQYLKLHKNLYRSLKPSEARTEAQKNRLDHVRAFKKWVGIY 705
BLAST of Lcy02g015890 vs. NCBI nr
Match:
KAG7036161.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1161.0 bits (3002), Expect = 0.0e+00
Identity = 593/710 (83.52%), Postives = 647/710 (91.13%), Query Frame = 0
Query: 1 MALILARERLLQSRLSTGFSLKSGLVSALQSSDLISACSEKLIFIKNFVNPRFAELWYIR 60
MALILARERLLQSR+ TGFSLKSGLVSA QSS ISACSEKL FIK FVNP FAEL IR
Sbjct: 1 MALILARERLLQSRVLTGFSLKSGLVSAPQSSASISACSEKL-FIKKFVNPGFAELCCIR 60
Query: 61 PQIPLIHCVSTSVHATKLCWGGSSYAVLLGKLETALKDHQIDEAWEFFNDFRRLYGFPKD 120
CV TSV+ T LCWGGSS+AVLLGKLE AL+DHQID+AWE FNDF+RLYGFPKD
Sbjct: 61 ----FCRCVHTSVNTTTLCWGGSSHAVLLGKLEIALRDHQIDDAWELFNDFKRLYGFPKD 120
Query: 121 NVLLVLVSQLSYASDCKWLQKACNLVLQIWKEKPVVLQLDALTKLGLGLARSQMPIPASE 180
NVLL+L+SQLSY DC WLQKACNLVLQIWKEKPVVLQL+ALTKL LGLARSQMPIPASE
Sbjct: 121 NVLLMLISQLSYTFDCNWLQKACNLVLQIWKEKPVVLQLNALTKLTLGLARSQMPIPASE 180
Query: 181 ILRLMLQTKRLPRMELLQLIILHMVKTEVGTYLASNIFVQICDCFLQQAANRNDQAKLMK 240
+LRLMLQ KRLP+MELLQ++I+HMVKTEVGTYLASNI VQICDCF QQ A+RNDQAK MK
Sbjct: 181 MLRLMLQIKRLPQMELLQMVIMHMVKTEVGTYLASNILVQICDCFSQQTASRNDQAKSMK 240
Query: 241 PDTMIFNLMLHACVEFRLSFKGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDLKSF 300
PDT+IFNL+LHACV FRLSFKGQQLVELMS+TGVVADA TIVLIARIYDMNGQRDDLK+F
Sbjct: 241 PDTVIFNLVLHACVGFRLSFKGQQLVELMSRTGVVADAQTIVLIARIYDMNGQRDDLKNF 300
Query: 301 KIHIDQVSPALFFHYYQFYDSLLSLHFKFDDFDSAANLVLEICRFGESPSIQKHWRDLHK 360
K+HIDQVS +L HY FYDSLLSLHFKFD+FDSA NLVLEICRFG+S SIQK W D K
Sbjct: 301 KMHIDQVSSSLVCHYCHFYDSLLSLHFKFDNFDSATNLVLEICRFGDSRSIQKRWMDFQK 360
Query: 361 SSLVPIGSHHLKNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTLARLIIEF 420
SSLVPIGS HLK+GLKIKIMPELLQRDSVLN EVKPE INYKNGKLVA+NKTLA+LI+EF
Sbjct: 361 SSLVPIGSPHLKDGLKIKIMPELLQRDSVLNFEVKPELINYKNGKLVASNKTLAKLIVEF 420
Query: 421 KRLAKTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVESAGSAVD 480
KRL +TSELS+LLL+VQ+GLASV+GSNLCS VVKACIYLGWLETAHDILDD+E AGSA+D
Sbjct: 421 KRLGRTSELSKLLLEVQKGLASVKGSNLCSDVVKACIYLGWLETAHDILDDIEVAGSAMD 480
Query: 481 SAAYFLLLKAYYNQEMLREADVLQKQMAKAGLSTATTEDMANRSLLHENEPTTHDTSLVE 540
SA YFLLL+AYY QEMLREADVLQKQMAKAGL TA EDMANRS+LHENEP THDTSL E
Sbjct: 481 SAVYFLLLEAYYKQEMLREADVLQKQMAKAGLPTAMAEDMANRSMLHENEPNTHDTSLAE 540
Query: 541 SLIQEMEETSAVSPRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTAQTFANLAFG 600
S++QEMEETS +SPRV+KFNSSIYFFCKAKM+EDALQAYKRMQQTGIQPTA+TFA+LAFG
Sbjct: 541 SIVQEMEETSGLSPRVYKFNSSIYFFCKAKMVEDALQAYKRMQQTGIQPTARTFADLAFG 600
Query: 601 FYSLQMHRDITILWGDIKRSMQSRSLVLNRDLYEFLLLCFLEGGYFERVMEIVGHMEEQN 660
F SLQ +RDIT LWGD+KR+MQS+ LVL+RDLYEFLLLCFL+GGYFERVME+VGHMEEQ
Sbjct: 601 FSSLQRYRDITFLWGDMKRNMQSKGLVLSRDLYEFLLLCFLQGGYFERVMEVVGHMEEQK 660
Query: 661 MYTDKGMYKNQFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGIY 711
M+TDKGMYK+Q+LKLHKNLYRSLKPSEARTEAQK RLE+VRAFKKWVGIY
Sbjct: 661 MFTDKGMYKDQYLKLHKNLYRSLKPSEARTEAQKNRLEHVRAFKKWVGIY 705
BLAST of Lcy02g015890 vs. NCBI nr
Match:
XP_022157932.1 (pentatricopeptide repeat-containing protein At4g17616 [Momordica charantia])
HSP 1 Score: 1136.3 bits (2938), Expect = 0.0e+00
Identity = 584/718 (81.34%), Postives = 637/718 (88.72%), Query Frame = 0
Query: 1 MALILARERLLQSRLSTGFSLKSGLVSALQSSDLISACSEKLIFIKNFVNPRFAELWYIR 60
MALILARERL+QSRL TGFSLKSGLVSAL+ SE LIFI+ F +PR EL Y++
Sbjct: 12 MALILARERLVQSRLWTGFSLKSGLVSALR-------ISENLIFIRIFGSPRVEELLYMK 71
Query: 61 PQIPLIHCVSTSVHATKLCWGGSSYAVLLGKLETALKDHQIDEAWEFFNDFRRLYGFPKD 120
Q L C+STSVH TKL WGGSSY VLLGKLETALKDHQ DEAWE F+DFRRLYGFPKD
Sbjct: 72 SQFRLSRCLSTSVHTTKLSWGGSSYEVLLGKLETALKDHQTDEAWELFDDFRRLYGFPKD 131
Query: 121 NVLLVLVSQLSYASDCKWLQKACNLVLQIWKEKPVVLQLDALTKLGLGLARSQMPIPASE 180
NVLL+LVSQLSY SDC L+KACNLV QIWKEKP+VLQLD LTKL L LARSQMPI AS+
Sbjct: 132 NVLLMLVSQLSYTSDCNKLKKACNLVFQIWKEKPIVLQLDVLTKLALTLARSQMPILASK 191
Query: 181 ILRLMLQTKRLPRMELLQLIILHMVKTEVGTYLASNIFVQICDCFLQQAANRNDQAKLMK 240
ILRLML+TKRLPRMELLQL+ILH VKTEVGTYLASNI VQICDCFLQQ ANRNDQAKLMK
Sbjct: 192 ILRLMLETKRLPRMELLQLVILHKVKTEVGTYLASNILVQICDCFLQQVANRNDQAKLMK 251
Query: 241 PDTMIFNLMLHACVEFRLSFKGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDLKSF 300
PDTM+FNL+ ACV+F+LSFKGQQLVELMSQTGVVADAHTIVLIA+IYDMNGQRDD+ +F
Sbjct: 252 PDTMVFNLVFDACVKFKLSFKGQQLVELMSQTGVVADAHTIVLIAKIYDMNGQRDDIMNF 311
Query: 301 KIHIDQVSPALFFHYYQFYDSLLSLHFKFDDFDSAANLVLEICRFGESPSIQKHWRDLHK 360
KIHIDQVSP+L HY QFYDSLLSLHFKF+DF+SAANLVLE CRFGESP IQKHWRD K
Sbjct: 312 KIHIDQVSPSLVCHYCQFYDSLLSLHFKFNDFESAANLVLETCRFGESPRIQKHWRDSQK 371
Query: 361 SSLVPIGSHHLKNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTLARLIIEF 420
SSL+PIGSHHLK GLKIKIMPELLQ+DSVLNVE KPEFINY NGKLV++ KTL++L+IEF
Sbjct: 372 SSLIPIGSHHLKAGLKIKIMPELLQKDSVLNVEAKPEFINYNNGKLVSSKKTLSKLVIEF 431
Query: 421 KRLAKTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVESAGSAVD 480
KRL KTSELS+LLLQVQ+GLAS EGSNLCSAVVK CIYLGWLE AHDILDDVE+AGSAVD
Sbjct: 432 KRLGKTSELSKLLLQVQKGLASTEGSNLCSAVVKTCIYLGWLEIAHDILDDVETAGSAVD 491
Query: 481 SAAYFLLLKAYYNQEMLREADVLQKQMAKAGLSTATTEDM---------ANRSLLHENEP 540
SA YFLLLKAYYNQEMLREADVLQKQMAK GLST TT DM ANR+ + P
Sbjct: 492 SAVYFLLLKAYYNQEMLREADVLQKQMAKVGLSTDTTADMVSSTYSPKLANRTSSQDXPP 551
Query: 541 TTHDTSLVESLIQEMEETSAVSPRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTA 600
TTH+TSLVESL+QEM+ETSA+SPRV+K NSSIYFFCKAKMIEDALQAYKRMQQ IQPT
Sbjct: 552 TTHETSLVESLVQEMKETSAISPRVYKLNSSIYFFCKAKMIEDALQAYKRMQQISIQPTL 611
Query: 601 QTFANLAFGFYSLQMHRDITILWGDIKRSMQSRSLVLNRDLYEFLLLCFLEGGYFERVME 660
QTFANLAFGF SLQM+RDITILWGD+KR++ SR+ V++R+LYEFLLLCFL+GGYFERVME
Sbjct: 612 QTFANLAFGFSSLQMYRDITILWGDMKRNIGSRNFVMSRELYEFLLLCFLQGGYFERVME 671
Query: 661 IVGHMEEQNMYTDKGMYKNQFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGI 710
I GHMEEQ M+TDKGMYK++FLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGI
Sbjct: 672 IAGHMEEQKMFTDKGMYKSEFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGI 722
BLAST of Lcy02g015890 vs. NCBI nr
Match:
XP_031738206.1 (pentatricopeptide repeat-containing protein At4g17616 [Cucumis sativus] >KGN60446.1 hypothetical protein Csa_001542 [Cucumis sativus])
HSP 1 Score: 1111.3 bits (2873), Expect = 0.0e+00
Identity = 582/716 (81.28%), Postives = 628/716 (87.71%), Query Frame = 0
Query: 1 MALILARERLLQSRLSTGFSLKSGLVSALQSSDLISACSEKLIFIKNFVNPRFAELWYIR 60
MALILARERLL SRLST F LKS LVSALQS LISAC EKLIF+K F N R ELWY +
Sbjct: 1 MALILARERLLHSRLSTIFPLKSRLVSALQSFALISACREKLIFLKFFGNSRVTELWYTK 60
Query: 61 PQIPLIHCVSTSVHATKLCWGGSSYAVLLGKLETALKDHQIDEAWEFFNDFRRLYGFPKD 120
Q+P CVST VH TKLCWGGSSY VLLGKLE ALKDHQIDEAWE F+DFR+LYGFP D
Sbjct: 61 SQVPFFRCVSTYVHPTKLCWGGSSYDVLLGKLEIALKDHQIDEAWELFSDFRKLYGFPND 120
Query: 121 NVLLVLVSQLSYASDCKWLQKACNLVLQIWKEKPVVLQLDALTKLGLGLARSQMPIPASE 180
N LL+LVSQLSY SDCK L KA NLVLQ WKEKPVVLQLD LTKL LGLARSQMPIPASE
Sbjct: 121 NFLLMLVSQLSYTSDCKRLHKAYNLVLQNWKEKPVVLQLDTLTKLVLGLARSQMPIPASE 180
Query: 181 ILRLMLQTKRLPRMELLQLIILHMVKTEVGTYLASNIFVQICDCFLQQAANRNDQAKLMK 240
ILRLMLQT+RLPRMELLQL+ILHMVK+EVGTYLASNI VQICDCFLQQA +RNDQAK MK
Sbjct: 181 ILRLMLQTRRLPRMELLQLVILHMVKSEVGTYLASNILVQICDCFLQQATSRNDQAKSMK 240
Query: 241 PDTMIFNLMLHACVEFRLSFKGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDLKSF 300
PDTM+FNL+LHACV F+LSFKGQQLVELMSQT VVADAHTIVLIARIY+MN QRD+LK+
Sbjct: 241 PDTMLFNLVLHACVRFKLSFKGQQLVELMSQTEVVADAHTIVLIARIYEMNDQRDELKNL 300
Query: 301 KIHIDQVSPALFFHYYQFYDSLLSLHFKFDDFDSAANLVLEICRFGESPSIQKHWRDLHK 360
K HIDQVSP+L HY QFYD+LLSLHFK+DDFDSAANL+LEICRFGES SIQKHWR+L K
Sbjct: 301 KTHIDQVSPSLVCHYCQFYDALLSLHFKYDDFDSAANLMLEICRFGESNSIQKHWRELQK 360
Query: 361 SSLVPIGSHHLKNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTLARLIIEF 420
SS +PIGS HLK+GLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVA+NKT+A+ I+E
Sbjct: 361 SSFLPIGSRHLKDGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVASNKTVAKFIVEL 420
Query: 421 KRLAKTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVESAGSAVD 480
+R+ +TSELS+LLLQVQ+GLASVEGSNLCS VVKACI LGWLETAHDILDDVE+ GS +D
Sbjct: 421 RRVGETSELSKLLLQVQKGLASVEGSNLCSDVVKACICLGWLETAHDILDDVEAVGSPLD 480
Query: 481 SAAYFLLLKAYYNQEMLREADVLQKQMAKAGLSTATTEDMA------NRSLLHENEPTTH 540
S YFLLLKAYY Q+MLREADVLQKQM K GLS +TTEDMA +R LL E TH
Sbjct: 481 STVYFLLLKAYYKQDMLREADVLQKQMTKVGLSISTTEDMASSTCSSSRILLPNIEVATH 540
Query: 541 DTSLVESLIQEMEETSAVSPRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTAQTF 600
TSLVESLIQEM+ETS++S RV KFNSSIYFFCKAKMIEDALQAYKRMQQ GIQPTAQTF
Sbjct: 541 -TSLVESLIQEMKETSSMS-RVLKFNSSIYFFCKAKMIEDALQAYKRMQQLGIQPTAQTF 600
Query: 601 ANLAFGFYSLQMHRDITILWGDIKRSMQSRSLVLNRDLYEFLLLCFLEGGYFERVMEIVG 660
ANL FGF LQM+R+ITILWGDIKR MQS LVL+RDLYE LLLCF+ GGYFERVMEIVG
Sbjct: 601 ANLVFGFSYLQMYRNITILWGDIKRRMQSTHLVLSRDLYECLLLCFIRGGYFERVMEIVG 660
Query: 661 HMEEQNMYTDKGMYKNQFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGIY 711
MEEQNMYTDK MYK +FL LHKNLYRSLKPSEA+TEAQKKRLE VRAFKKWVGIY
Sbjct: 661 RMEEQNMYTDKRMYKREFLMLHKNLYRSLKPSEAKTEAQKKRLEDVRAFKKWVGIY 714
BLAST of Lcy02g015890 vs. TAIR 10
Match:
AT4G17616.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 590.9 bits (1522), Expect = 1.4e-168
Identity = 318/654 (48.62%), Postives = 443/654 (67.74%), Query Frame = 0
Query: 60 RPQIPLIHCVSTSVHATKLCWGGSSYAVLLGKLETALKDHQIDEAWEFFNDFRRLYGFPK 119
R P + C TSV +L W SS +L KLETALKDH++D+AW+ F DF+RLYGFP+
Sbjct: 31 RTSKPSLFC--TSVKPARLNWEVSSQVILKKKLETALKDHRVDDAWDVFKDFKRLYGFPE 90
Query: 120 DNVLLVLVSQLSYASDCKWLQKACNLVLQIWKEKPVVLQLDALTKLGLGLARSQMPIPAS 179
++ V+ LSY+SD WL KA +L K+ P +L D LTKL L LAR+QM A
Sbjct: 91 SVIMNRFVTVLSYSSDAGWLCKASDLTRLALKQNPGMLSGDVLTKLSLSLARAQMVESAC 150
Query: 180 EILRLMLQTKRLPRMELLQLIILHMVKTEVGTYLASNIFVQICDCFLQ-QAANRNDQ-AK 239
ILR+ML+ + ++L+L+++HMVKTE+GT LASN VQ+CD F++ RN
Sbjct: 151 SILRIMLEKGYVLTSDVLRLVVMHMVKTEIGTCLASNYLVQVCDRFVEFNVGKRNSSPGN 210
Query: 240 LMKPDTMIFNLMLHACVEFRLSFKGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDL 299
++KPDT++FNL+L +CV F S KGQ+L+ELM++ VVADA++IV+++ IY+MNG RD+L
Sbjct: 211 VVKPDTVLFNLVLGSCVRFGFSLKGQELIELMAKVDVVADAYSIVIMSCIYEMNGMRDEL 270
Query: 300 KSFKIHIDQVSPALFFHYYQFYDSLLSLHFKFDDFDSAANLVLEICRFGESPSIQKHWRD 359
+ FK HI QV P L HY F+D+LLSL FKFDD SA L L++C+ S++ D
Sbjct: 271 RKFKEHIGQVPPQLLGHYQHFFDNLLSLEFKFDDIGSAGRLALDMCKSKVLVSVENLGFD 330
Query: 360 LHKSSLVPIGSHHLKNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTLARLI 419
K ++P+GSHH+++GLKI I P+LLQRDS L V+ + F+NY N KL TNKTLA+L+
Sbjct: 331 SEKPRVLPVGSHHIRSGLKIHISPKLLQRDSSLGVDTEATFVNYSNSKLGITNKTLAKLV 390
Query: 420 IEFKRLAKTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVESAGS 479
+KR ELS+LL S+ GS LC+ V+ AC+ +GWLE AHDILDD+ SAG
Sbjct: 391 YGYKRHDNLPELSKLLF-------SLGGSRLCADVIDACVAIGWLEAAHDILDDMNSAGY 450
Query: 480 AVDSAAYFLLLKAYYNQEMLREADVLQKQMAKAGLSTATTEDMANRSLLHENEPTTHDTS 539
++ A Y ++L YY +MLR A+VL KQM KAGL T + ++ E + + +T
Sbjct: 451 PMELATYRMVLSGYYKSKMLRNAEVLLKQMTKAGLITDPSNEIVVSPETEEKD--SENTE 510
Query: 540 LVESLIQEME--ETSAVSPRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTAQTFA 599
L + L+QE+ + +++ NSS+Y+FCKAKM DAL Y+++ + I PT Q+F
Sbjct: 511 LRDLLVQEINAGKQMKAPSMLYELNSSLYYFCKAKMQGDALITYRKIPKMKIPPTVQSFW 570
Query: 600 NLAFGFYSLQMHRDITILWGDIKRSMQSRSLVLNRDLYEFLLLCFLEGGYFERVMEIVGH 659
L + SL M+R+ITI+WGDIKR++ S++L +DL E L++ FL GGYFERVME++ +
Sbjct: 571 ILIDMYSSLGMYREITIVWGDIKRNIASKNLKTTQDLLEKLVVNFLRGGYFERVMELISY 630
Query: 660 MEEQNMYTDKGMYKNQFLKLHKNLYRSLKPSEARTEAQKKRLEYVRAFKKWVGI 710
M+E +MY D MYKN++LKLHKNLYR+LK S+A TEAQ +RLE+V+ F+K VGI
Sbjct: 631 MKENDMYNDLTMYKNEYLKLHKNLYRTLKASDAVTEAQAQRLEHVKTFRKLVGI 673
BLAST of Lcy02g015890 vs. TAIR 10
Match:
AT1G03100.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 302.8 bits (774), Expect = 7.5e-82
Identity = 204/698 (29.23%), Postives = 354/698 (50.72%), Query Frame = 0
Query: 86 AVLLGKLETALKDHQIDEAWEFFNDFRRLYGFPKDNVLLVLVSQLSYASDCKWLQKACNL 145
A L +++ A+ +H+ DEAW F ++ GFP+ +V+ +V + + D WLQK +L
Sbjct: 96 AKLNEEIQIAVDEHRCDEAWRLFEQHMQMEGFPRKSVVNNVVVCFAESLDSNWLQKGYSL 155
Query: 146 VLQIWKE-KPVVLQLDALTKLGLGLARSQMPIPASEILRLMLQTKRLPRMELLQLIILHM 205
V Q ++E K +L+ + L L L LA+S M +PAS ILR +++T+ P + ++ HM
Sbjct: 156 VEQAYEEGKQNLLEKEPLLYLSLALAKSGMAVPASTILRKLVETEEYPHVSAWSAVLAHM 215
Query: 206 VKTEVGTYLASNIFVQICDCF----LQQAANRNDQAKLMKPDTMIFNLMLHACVEFRLSF 265
G+YL++ + ++I F + N MKP+T + N+ L C+ F +
Sbjct: 216 SLAGSGSYLSAELVLEIGYLFHNNRVDPRKKSNAPLLAMKPNTQVLNVALAGCLLFGTTR 275
Query: 266 KGQQLVELMSQTGVVADAHTIVLIARIYDMNGQRDDLKSFKIHIDQVSPALFFHYYQFYD 325
K +QL++++ + GV ADA+ +V++A IY+ NG+R++L+ + HID+ ++QFY+
Sbjct: 276 KAEQLLDMIPKIGVKADANLLVIMAHIYERNGRREELRKLQRHIDEACNLNESQFWQFYN 335
Query: 326 SLLSLHFKFDDFDSAANLVLEICR-----------------------------FGESPSI 385
LL H KF D +SA+ +VLE+ R G+ +
Sbjct: 336 CLLMCHLKFGDLESASKMVLEMLRRGKVARNSLGAAILEFDTADDGRLYTKRVSGKGSEV 395
Query: 386 QKH----WRDLHKSSLVPIGSHHL-KNGLKIKIMPELLQRDSVLNVEVKPEFINYKNGKL 445
++H R + S++P + LK++ + + + + V+ E I + G L
Sbjct: 396 KEHDNPETRVVSIHSMIPYDEFSRDRKFLKLEAEAKDVLGALLAKLHVQVELITSERGVL 455
Query: 446 VATNKTLARLIIEFKRLAKTSELSQLLLQVQEGLASVEGSN-LCSAVVKACIYLGWLETA 505
T + +L F K EL++ LL+ + + V N + V+ ACI LG L+ A
Sbjct: 456 QPTEEIYVKLAKAFLESGKMKELAKFLLKAEHEDSPVSSDNSMLINVINACISLGMLDQA 515
Query: 506 HDILDDVESAGSAVDSAAYFLLLKAYYNQEMLREADVLQKQMAKAGLSTATT-------- 565
HD+LD++ AG S+ Y LLKAY N RE L + KAG+ ++
Sbjct: 516 HDLLDEMRMAGVRTGSSVYSSLLKAYCNTNQTREVTSLLRDAQKAGIQLDSSCYEALIQS 575
Query: 566 --------------EDMANRSLLHENEPT----------THDTSLVESLIQEMEETSAVS 625
++M +L + L+ L++E+ E ++
Sbjct: 576 QVIQNDTHGALNVFKEMKEAKILRGGNQKFEKLLKGCEGNAEAGLMSKLLREIREVQSLD 635
Query: 626 PRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTAQTFANLAFGFYSL-QMHRDITI 685
VH +N+ I+FF K +++DA +A KRM+ G P AQTF ++ G+ ++ + ++T
Sbjct: 636 AGVHDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVTGYAAIGSKYTEVTE 695
Query: 686 LWGDIKR-SMQSRSLVLNRDLYEFLLLCFLEGGYFERVMEIVGHMEEQNMYTDKGMYKNQ 710
LWG++K + + S+ +++L + +L F+ GG+F R E+V ME++NM+ DK Y+
Sbjct: 696 LWGEMKSIAAATSSMKFDQELLDAVLYTFVRGGFFSRANEVVEMMEKKNMFVDKYKYRML 755
BLAST of Lcy02g015890 vs. TAIR 10
Match:
AT3G09650.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 100.5 bits (249), Expect = 5.6e-21
Identity = 146/703 (20.77%), Postives = 282/703 (40.11%), Query Frame = 0
Query: 96 LKDHQIDEAWEFFNDFRRLYGFPKDNVLLVLVSQLSYASDCKWLQKACNLVLQIWKEKPV 155
L++ + DEAW + L P L LVSQLSY S + L +A +++ ++ E+ +
Sbjct: 92 LRNRKTDEAWAKYVQSTHL---PGPTCLSRLVSQLSYQSKPESLTRAQSILTRLRNERQL 151
Query: 156 -VLQLDALTKLGLGLARSQMPIPASEILRLMLQTKRLPRMELLQLIILHM-VKTEVGTYL 215
L ++L L + A+S + A +++ M+++ LP ++ + + + G
Sbjct: 152 HRLDANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEE 211
Query: 216 ASNIFVQICDCFLQQAANRNDQAKL--MKPDTMIFNLMLHACVEFRLSFKGQQLVELMSQ 275
+ +F+ I ++ DQ+ + +PDT FN +L+AC + K +L E MS+
Sbjct: 212 SIKLFIAI----TRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSE 271
Query: 276 TGVVADAHTIVLIARIYDMNGQRDDLKSFKIH--IDQVSPALFFHYYQFYDSLLSLHFKF 335
D T ++ ++ G R +L F + ID+ + SL++ + F
Sbjct: 272 WDCEPDVLTYNVMIKLCARVG-RKELIVFVLERIIDKGIKVCMTTMH----SLVAAYVGF 331
Query: 336 DDFDSAANLV-------LEICR------------------------FGESPSIQKHWRD- 395
D +A +V ++C+ F + RD
Sbjct: 332 GDLRTAERIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDE 391
Query: 396 LHKSSLVPIGSHHLKNGL----KIKIMPELLQRDSVLNVEVKPEFINYKNGKLVATNKTL 455
+ + +V + L N + + ++P++ DS + + ++ KNG++ T + L
Sbjct: 392 VSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYM--KNGRVADTARML 451
Query: 456 ARLIIEFKRLAKTSELSQLLLQVQEGLASVEGSNLCSAVVKACIYLGWLETAHDILDDVE 515
+ + R + E++ + VV A + G ++ A +L ++
Sbjct: 452 EAMRRQDDRNSHPDEVTY------------------TTVVSAFVNAGLMDRARQVLAEMA 511
Query: 516 SAGSAVDSAAYFLLLKAYYNQ-EMLREADVLQKQMAKAGLSTATTE-----------DMA 575
G + Y +LLK Y Q ++ R D+L++ AG+ D +
Sbjct: 512 RMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDS 571
Query: 576 NRSLLHENEPTTH--------------------DTSLVESLIQEMEETSAVSPRVHKFNS 635
+L NE T L + EM V + +N
Sbjct: 572 AGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNM 631
Query: 636 SIYFFCKAKMIEDALQAYKRMQQTGIQPTAQTFANLAFGFYSLQMHRDITILWGDIKRSM 695
+ +C+ +IEDA + RM++ G P T+ +LA G + D +LW +IK
Sbjct: 632 LVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERC 691
Query: 696 QSRS---------------LVLNRDLYEFLLLCFLEGGYFERVMEIVGHMEEQNMYTDKG 710
+ L + L + L + +F++ +EI+ MEE + +K
Sbjct: 692 AVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKT 751
BLAST of Lcy02g015890 vs. TAIR 10
Match:
AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 61.2 bits (147), Expect = 3.8e-09
Identity = 53/220 (24.09%), Postives = 96/220 (43.64%), Query Frame = 0
Query: 450 SAVVKACIYLGWLETAHDILDDVESAGSAVDSAAYFLLLKAYYNQEMLREADVLQKQMAK 509
+ +++ Y G + +L D+ D A+ L+ + + LREA+ L K+M +
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 510 AGLSTAT-TEDMANRSLLHENEPTTHDTSLVESLIQEMEETSAVSPRVHKFNSSIYFFCK 569
G+S T T EN+ + L ++ + P + FN I +CK
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHML------DLMVSKGCGPNIRTFNILINGYCK 405
Query: 570 AKMIEDALQAYKRMQQTGIQPTAQTFANLAFGFYSLQMHRDITILWGDIKRSMQSRSLVL 629
A +I+D L+ +++M G+ T+ L GF L + ++ + M SR +
Sbjct: 406 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE----VAKELFQEMVSRRVRP 465
Query: 630 NRDLYEFLLLCFLEGGYFERVMEIVGHMEEQNMYTDKGMY 669
+ Y+ LL + G E+ +EI +E+ M D G+Y
Sbjct: 466 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
BLAST of Lcy02g015890 vs. TAIR 10
Match:
AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 55.8 bits (133), Expect = 1.6e-07
Identity = 44/185 (23.78%), Postives = 82/185 (44.32%), Query Frame = 0
Query: 484 YFLLLKAYYNQEMLREADVLQKQMAKAGLSTATTEDMANRSLLHENEPTTHDTSLVESLI 543
+ +L+ ++ + LREA+ L K+M G++ T + + +V+ ++
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 544 QEMEETSAVSPRVHKFNSSIYFFCKAKMIEDALQAYKRMQQTGIQPTAQTFANLAFGFYS 603
+ P + FN I +CKA I+D L+ +++M G+ T+ L GF
Sbjct: 396 -----SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 455
Query: 604 LQMHRDITILWGDIKRSMQSRSLVLNRDLYEFLLLCFLEGGYFERVMEIVGHMEEQNMYT 663
L + ++ + M SR + N Y+ LL + G E+ +EI +E+ M
Sbjct: 456 LGKLN----VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 511
Query: 664 DKGMY 669
D G+Y
Sbjct: 516 DIGIY 511
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
B3H672 | 1.9e-167 | 48.62 | Pentatricopeptide repeat-containing protein At4g17616 OS=Arabidopsis thaliana OX... | [more] |
Q9SA60 | 1.1e-80 | 29.23 | Pentatricopeptide repeat-containing protein At1g03100, mitochondrial OS=Arabidop... | [more] |
Q9SF38 | 7.9e-20 | 20.77 | Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidop... | [more] |
Q9ASZ8 | 5.3e-08 | 24.09 | Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX... | [more] |
Q84ZD2 | 5.9e-07 | 25.00 | Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DVU2 | 0.0e+00 | 81.34 | pentatricopeptide repeat-containing protein At4g17616 OS=Momordica charantia OX=... | [more] |
A0A0A0LKC3 | 0.0e+00 | 81.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912300 PE=4 SV=1 | [more] |
A0A1S3BZV2 | 0.0e+00 | 79.55 | pentatricopeptide repeat-containing protein At4g17616 OS=Cucumis melo OX=3656 GN... | [more] |
A0A5D3BA19 | 0.0e+00 | 79.55 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1H461 | 8.4e-283 | 85.05 | pentatricopeptide repeat-containing protein At4g17616 OS=Cucurbita moschata OX=3... | [more] |
Match Name | E-value | Identity | Description | |
XP_023534668.1 | 0.0e+00 | 84.23 | pentatricopeptide repeat-containing protein At4g17616 [Cucurbita pepo subsp. pep... | [more] |
KAG6606214.1 | 0.0e+00 | 83.52 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG7036161.1 | 0.0e+00 | 83.52 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022157932.1 | 0.0e+00 | 81.34 | pentatricopeptide repeat-containing protein At4g17616 [Momordica charantia] | [more] |
XP_031738206.1 | 0.0e+00 | 81.28 | pentatricopeptide repeat-containing protein At4g17616 [Cucumis sativus] >KGN6044... | [more] |
Match Name | E-value | Identity | Description | |
AT4G17616.1 | 1.4e-168 | 48.62 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G03100.1 | 7.5e-82 | 29.23 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G09650.1 | 5.6e-21 | 20.77 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G12620.1 | 3.8e-09 | 24.09 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G12300.1 | 1.6e-07 | 23.78 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |