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Lcy02g013980 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGACTAAGGCAAATCATAGTCGCATGCATTCTCTTAAAACTGTTATTTCTTTTGATAATGTTTTTGTTGTGGATTGTATAGGTTTAAGCGGTGGCTTGGCCTTGTTTTGGAAATCTTCTGTTAATTTAAATATTGTTTCGTATTCTAAAGTTCATATAGATTGTATTATTGAGTTTCAGAATAAAATATTCAGATTTACAGGTTTGTATGGTGAGCCCAAATCAGAAAACAGGCATTTAACTTGGACCTTACTTCGACGCCTCAATGACTGCCCCCACCAGGCTTGGATGGTAGCAGGTGATCTGAATGCTATAACCAAAGAAAGCGAAAAAGATGGAGGAGGAGTGTTTGAATGCACTCAGAGTAGAAATTTTGTGAATGTCTTAAATGATTGTGCTTTGAAAGATCTTGGTTTTATAGGCAATCGTTTTACTTGGATGAACAAACAACCAGGAGCTGCGTTTATACGCAAACGACTGGACCGAGGTGTTGGTAATGTGGATCTGTTATCTCTTTATGATGCTATTAAAATTAATCATCTTGGGTTTTTGTCTTCAGATCATAGGGTTCTTGAAATTTGCCTCCTCAACCATCCCCCAAGTGACCAAAGTAGAAGAAAAGCTCGTCATTTTAAATTTGAAGAAGCATGGACTCTCCACGAGGATTGTGCATCAATTATTCAAACGGGCTGGAATAAGGATAGGGGGGAAGACTCCCCGGAGGATCTTCTCACCCGCATTCGCAGTGTTTCAGAGGAATTAAAGAGGTGGGGAAGAAATAAAACAGGAAAATATAAAGAAAAAATAGCAGAGGTGAAGGGGCGAATTGAGATGTTATTGGAGGATAGGTTGGGGGATAGAGCTTTGGAGCACCTAAGAATGGAAGAGAAACGCCTAGATTACATTCTTCAGGAGGAAGAAATTTACTGGAAGCAACGCTCTCGGGAGGACTGGCTAAAATGGGGAGACCGGAATACTAAATGGTTTCATTCCAAGGCAACCCAAAGGCGTCAGAGAAATAAAATCCAGTCTATTAACGACTCCTCAGGGCATTGTTTTGATAAAAGGGAGGATATTGAACAGATTTTCCTTTCTTATTATACTGAACTTTTTAAATCTTCTCCTATGAATGTGCAGGCTATTGAAGAAATTTTACAGGCTACCACACCTAGACTGACTGCTGACATGAATGCAAATCTAGAAAGGGTGTTCGTAGCGGCAGAAGTGGAGGAAGCTCTAAAACAAATGCATCCAACCAAAGCTCCTGGACCAGATGGGTTGCCAGCAATATTCTATAAAAAATACTGGCACATTGTGGGGGAAAAGCTAACAAGCACATGTCTCCGTTGTCTTAATGAGGGGGCAATTCCTGATCAGTTCAACAAGACAACAATCGTGCTCATTCCCAAGAAGAAAAATCCAAGCACGGTGACTGATTTTCGTCCTATTAGCTTATGTAATGTGTGCTATAAAATCATTGCTAAAGTGCTTGCTAACAGATTGAAACCTATTCTGCAATCAGTTATCTCTGAAAATCAAAGTGCTTTTGTCCCTGGTAGGCTTATAGCAGATAACATTATTGTAGGATATGAATGTTTGCATTTTATGCGAGGGACTAAATCTAAGAAAAATAATTTCGCATCTGTTAAGCTGGATATGAGCAAAGCTTATGATAGAGTGGAATGGTTTTTTCTTAGGAAAATGATGGCTAAAATGGGTTTTAGTTCTTCTTAGATAGATAGAATTGGCATGTGTATTGAATCTGTTTCTTTCTCACTTCTCATTAATGGGAACTGCACTGAAGTCTTTACACCCCAACGGGGCCTTAGACAAGGCGATCCTTTATCTCCTTATTTGTTTCTTTTATGTGCTGAAGGCCTATCCAACATTCTTAGGAATGCTGAGATCTCAGGCAAAATAACAGGTCTTCGGATTGCTCGAACGGTTCCTGCTATTACTCATCTCTTTTTTGCAGATGATAGTTTGCTTTTTCTCAAAGCCAAAAGGGAGGAGTTCAGTGAGATGCAAAGAATATTAAAAGTCTACGAGGAAGCCACTGGCCAAATTGTCAACTTTGATAAATCAGCAATTGTGTTCGGAGCAAACACCAACAATGATGAACAGGTTCTTCTAGCTGACATTCTGAAAGTCAAGATAGTTCCAGACCATGGGAAATATCTTGGTTGCCCATCCTCTTTATCAAAAAACAAGAAGGCTACAATGAATTATATAAAGTCCAAAGTTCAAAAGGTCTTACAAGGCTGGAAAGGAAATTTGTTCTCATCAGCTGGGAAGGAGGCACTCCTAAAAGCAGTGGCTCAGGCGATCCCCACTCATACTCTCTCTTGCTTTAAGCTTCCACAGGGGTGTTGCCATGATCTGAATAGAATGATGGCTAATTTTTGGTGGGGAAGCTCTGAACAGGGAAGGAAAATTCATTGGTTGAAATGGAGTATAATGACAAGGCCAAAAGACAGAGGGGGCATGGGCTTTAGAGACATAGGCATTTTCAATAAAGCTCTCTTGGCTAAGCACACATGGAGAATTCTGCATAATCCACAATCCCTACTAGCTAAAACTTTGAAGGCGAAATATTTTCCTAAAGAAAATTTCCTTCAGGCTAAGTTGGGGAGTCGACCTTCATATACCTGGCGTGGAATTCTTTGGGGTAGAGAGCTAGCCATGAAAGGGGGTAGATGGAGAATTGGAAATGGAGATACCATAGATATATTTGATGATAAATGGACCCCGAGGGAGAAAACTTTCAAGTTGCTCTCATTGCCACGCCCACTGACTGACTACAGGGTTAAAAGTCTCTTTTCAGGTAGCCAATCTTGGAATATGAATTTACTAACAGATCTTTTTGTTCAGGAAGATGTGCAGGTAATCAAAGATATCCCAATTGCTGGGGTAAATCACCCAGATTGTTTCTTCTGGCACTACGACAAACGGGGGAGGTACACAGTCAAGAGCGGGTACAAGCTTGCCTTAGAGGACGTCCATGAGGCGTCTCCATCCTCTGAATCGTCAATATTTAGCTGGTGGAAGGCCTTGTGGAAATTCCCTGTACCAAACAAAATAAAGATCTTTATGTGGAGAGCCAGCCTCAATATCTTGCCCACCAGGATGAACATCCTCAAACGCCATGTTCCATGCGATCCAACATGTCCCTTGTGTGAAAAAGAGAATGAAACAATGTTTCATGTGTTATGGGAATGTAAGAAGGTAAAAAGGCACTGGGCTCATTGGAGCTCAGTGCAAACCTTAGTCCGAGGTCACTTTACTAATCCTATTGACCTTTTTTGCAGGGCACATGA ATGGAGACTAAGGCAAATCATAGTCGCATGCATTCTCTTAAAACTGTTATTTCTTTTGATAATGTTTTTGTTGTGGATTGTATAGGTTTAAGCGGTGGCTTGGCCTTGTTTTGGAAATCTTCTGTTAATTTAAATATTGTTTCGTATTCTAAAGTTCATATAGATTGTATTATTGAGTTTCAGAATAAAATATTCAGATTTACAGGTTTGTATGGTGAGCCCAAATCAGAAAACAGGCATTTAACTTGGACCTTACTTCGACGCCTCAATGACTGCCCCCACCAGGCTTGGATGGTAGCAGGTGATCTGAATGCTATAACCAAAGAAAGCGAAAAAGATGGAGGAGGAGTGTTTGAATGCACTCAGAGTAGAAATTTTGTGAATGTCTTAAATGATTGTGCTTTGAAAGATCTTGGTTTTATAGGCAATCGTTTTACTTGGATGAACAAACAACCAGGAGCTGCGTTTATACGCAAACGACTGGACCGAGGTGTTGATCTTTTTGTTCAGGAAGATGTGCAGGTAATCAAAGATATCCCAATTGCTGGGGTAAATCACCCAGATTGTTTCTTCTGGCACTACGACAAACGGGGGAGGTACACAGTCAAGAGCGGGTACAAGCTTGCCTTAGAGGACGTCCATGAGGCGTCTCCATCCTCTGAATCGTCAATATTTAGCTGGTGGAAGGCCTTGTGGAAATTCCCTGTACCAAACAAAATAAAGATCTTTATGTGGAGAGCCAGCCTCAATATCTTGCCCACCAGGATGAACATCCTCAAACGCCATGTTCCATGCGATCCAACATGTCCCTTGTGTGAAAAAGAGAATGAAACAATGTTTCATGTGTTATGGGAATGTAAGAAGGGCACATGA ATGGAGACTAAGGCAAATCATAGTCGCATGCATTCTCTTAAAACTGTTATTTCTTTTGATAATGTTTTTGTTGTGGATTGTATAGGTTTAAGCGGTGGCTTGGCCTTGTTTTGGAAATCTTCTGTTAATTTAAATATTGTTTCGTATTCTAAAGTTCATATAGATTGTATTATTGAGTTTCAGAATAAAATATTCAGATTTACAGGTTTGTATGGTGAGCCCAAATCAGAAAACAGGCATTTAACTTGGACCTTACTTCGACGCCTCAATGACTGCCCCCACCAGGCTTGGATGGTAGCAGGTGATCTGAATGCTATAACCAAAGAAAGCGAAAAAGATGGAGGAGGAGTGTTTGAATGCACTCAGAGTAGAAATTTTGTGAATGTCTTAAATGATTGTGCTTTGAAAGATCTTGGTTTTATAGGCAATCGTTTTACTTGGATGAACAAACAACCAGGAGCTGCGTTTATACGCAAACGACTGGACCGAGGTGTTGATCTTTTTGTTCAGGAAGATGTGCAGGTAATCAAAGATATCCCAATTGCTGGGGTAAATCACCCAGATTGTTTCTTCTGGCACTACGACAAACGGGGGAGGTACACAGTCAAGAGCGGGTACAAGCTTGCCTTAGAGGACGTCCATGAGGCGTCTCCATCCTCTGAATCGTCAATATTTAGCTGGTGGAAGGCCTTGTGGAAATTCCCTGTACCAAACAAAATAAAGATCTTTATGTGGAGAGCCAGCCTCAATATCTTGCCCACCAGGATGAACATCCTCAAACGCCATGTTCCATGCGATCCAACATGTCCCTTGTGTGAAAAAGAGAATGAAACAATGTTTCATGTGTTATGGGAATGTAAGAAGGGCACATGA METKANHSRMHSLKTVISFDNVFVVDCIGLSGGLALFWKSSVNLNIVSYSKVHIDCIIEFQNKIFRFTGLYGEPKSENRHLTWTLLRRLNDCPHQAWMVAGDLNAITKESEKDGGGVFECTQSRNFVNVLNDCALKDLGFIGNRFTWMNKQPGAAFIRKRLDRGVDLFVQEDVQVIKDIPIAGVNHPDCFFWHYDKRGRYTVKSGYKLALEDVHEASPSSESSIFSWWKALWKFPVPNKIKIFMWRASLNILPTRMNILKRHVPCDPTCPLCEKENETMFHVLWECKKGT Homology
BLAST of Lcy02g013980 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07 Identity = 27/99 (27.27%), Postives = 49/99 (49.49%), Query Frame = 0
BLAST of Lcy02g013980 vs. ExPASy TrEMBL
Match: A0A444YVX9 (RNase H domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B06g085879 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 1.4e-34 Identity = 89/261 (34.10%), Postives = 132/261 (50.57%), Query Frame = 0
BLAST of Lcy02g013980 vs. ExPASy TrEMBL
Match: A0A6P9DVH5 (uncharacterized protein LOC109015597 OS=Juglans regia OX=51240 GN=LOC109015597 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 2.5e-31 Identity = 70/184 (38.04%), Postives = 102/184 (55.43%), Query Frame = 0
BLAST of Lcy02g013980 vs. ExPASy TrEMBL
Match: A0A2I4DF11 (uncharacterized protein LOC108979499 OS=Juglans regia OX=51240 GN=LOC108979499 PE=4 SV=2) HSP 1 Score: 144.1 bits (362), Expect = 9.5e-31 Identity = 69/165 (41.82%), Postives = 96/165 (58.18%), Query Frame = 0
BLAST of Lcy02g013980 vs. ExPASy TrEMBL
Match: A0A2I4DF11 (uncharacterized protein LOC108979499 OS=Juglans regia OX=51240 GN=LOC108979499 PE=4 SV=2) HSP 1 Score: 111.7 bits (278), Expect = 5.2e-21 Identity = 51/123 (41.46%), Postives = 70/123 (56.91%), Query Frame = 0
HSP 2 Score: 143.3 bits (360), Expect = 1.6e-30 Identity = 70/184 (38.04%), Postives = 101/184 (54.89%), Query Frame = 0
BLAST of Lcy02g013980 vs. ExPASy TrEMBL
Match: A0A6P9EQ08 (uncharacterized protein LOC109020982 OS=Juglans regia OX=51240 GN=LOC109020982 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 4.9e-11 Identity = 37/121 (30.58%), Postives = 64/121 (52.89%), Query Frame = 0
HSP 2 Score: 142.9 bits (359), Expect = 2.1e-30 Identity = 100/420 (23.81%), Postives = 161/420 (38.33%), Query Frame = 0
BLAST of Lcy02g013980 vs. NCBI nr
Match: KAF8408042.1 (hypothetical protein HHK36_007182 [Tetracentron sinense]) HSP 1 Score: 189.1 bits (479), Expect = 5.3e-44 Identity = 113/397 (28.46%), Postives = 170/397 (42.82%), Query Frame = 0
BLAST of Lcy02g013980 vs. NCBI nr
Match: RYR06082.1 (hypothetical protein Ahy_B06g085879 [Arachis hypogaea]) HSP 1 Score: 156.8 bits (395), Expect = 2.9e-34 Identity = 89/261 (34.10%), Postives = 132/261 (50.57%), Query Frame = 0
BLAST of Lcy02g013980 vs. NCBI nr
Match: KAE8808833.1 (hypothetical protein D1007_14579 [Hordeum vulgare]) HSP 1 Score: 153.7 bits (387), Expect = 2.5e-33 Identity = 83/234 (35.47%), Postives = 125/234 (53.42%), Query Frame = 0
BLAST of Lcy02g013980 vs. NCBI nr
Match: KAF5449841.1 (hypothetical protein F2P56_030246 [Juglans regia]) HSP 1 Score: 152.5 bits (384), Expect = 5.5e-33 Identity = 76/163 (46.63%), Postives = 97/163 (59.51%), Query Frame = 0
BLAST of Lcy02g013980 vs. NCBI nr
Match: XP_024021734.1 (uncharacterized protein LOC112091706 [Morus notabilis]) HSP 1 Score: 152.1 bits (383), Expect = 7.2e-33 Identity = 75/166 (45.18%), Postives = 96/166 (57.83%), Query Frame = 0
BLAST of Lcy02g013980 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 82.4 bits (202), Expect = 6.5e-16 Identity = 45/132 (34.09%), Postives = 62/132 (46.97%), Query Frame = 0
BLAST of Lcy02g013980 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 55.1 bits (131), Expect = 1.1e-07 Identity = 29/90 (32.22%), Postives = 45/90 (50.00%), Query Frame = 0
BLAST of Lcy02g013980 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 50.1 bits (118), Expect = 3.6e-06 Identity = 20/61 (32.79%), Postives = 35/61 (57.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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