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Lcy02g013320 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAATGCATAAACACAAATATGTTTGACCAAATCCCATGAATACAAACAAATAACATGAACCCAAACACAGAGTAACAGACCCTCGCCGGCGCATTCCAAAACTGACCTCTCCGATTCCCACGAATTTCCCCCTTCTTCTCCTCACTCAGATATCAACCGCTCTTCTTCCACTCTCCCTATAAATTCCTCTCTCTCTCTTCTCTCTCTCTCTCTAAAACCATTCCCTCCTCCTCTTCTTCTTCTTCTTCTTCTCCTTCCTCTCTCCTCTGCAACGAAATCATGGGCGAAGACAACCAGACCTTTCCATTAGCGCACTACCAAGCTCACCACAAATCCGACGAAGAGCAGCAACTCGCCACCTTCAAGACTCTCAAGAAGGAACGATCCAACAAATGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCAGCGTCGCCGTTTTGATCTTCGCTCTCATCGTTCTGCGCGTCAATTCTCCCACGATCGACCTCTCTTCCGTCTCCCTCGCTAAATTCTCACTCGCTAACGCTTCCAATTCCTCTTCTCCGTCGTTCAATCTCACCTTGATCGCCGCCCTCTCCGTCCGCAATTCGAACTTCGGTCCGTTCAATTTCGATGACGGCACTGTCGGTCTCGTGTACGGCGGCGCGATTGTCGGCGAGAGGAGCACCGGCGGGGGTAGGGCGGAGGCGAAGGGGACGGCGAGGATCAATGTTACTGTTGAAGCTTTCGCGAAGAACGTGAGCGGCGGTCTGAATGATTCGGGGATTTTGAATCTGAGTAGCTTTGCGAGATTGAGAGGCAGAGTTCGTTTGATTCATATTCTGAGGAGGAGGATTTCGTCGGAGATTAGTTGTTCGATTAATCTCGATTTGAATAATCGTCAAATTCAGCATAATTGGGTTTGTGAGTGATGAGAATCGGAATCCATGAACTCCACGAACCTAATTAGTTTAATATTTTTCAAAATTCGTTTCATTTTTTTTTTTTTTAAAGAAATATATAGTTCGAAGTTTGTTACAACTTAATTACAATTTTGGAGGGTTTTTTTATTTTTTTTTTTCGCATACGATATTACGATGTAAATATATGTATGTTTTAACTCTTGTGCAAGATATTTCAATAAAAATATCTCTATTATTGCATATTAGTAATTTAAAAAAATAATAATAATAATTAAGTTATGTGGCTTATTACAG CTCAATGCATAAACACAAATATGTTTGACCAAATCCCATGAATACAAACAAATAACATGAACCCAAACACAGAGTAACAGACCCTCGCCGGCGCATTCCAAAACTGACCTCTCCGATTCCCACGAATTTCCCCCTTCTTCTCCTCACTCAGATATCAACCGCTCTTCTTCCACTCTCCCTATAAATTCCTCTCTCTCTCTTCTCTCTCTCTCTCTAAAACCATTCCCTCCTCCTCTTCTTCTTCTTCTTCTTCTCCTTCCTCTCTCCTCTGCAACGAAATCATGGGCGAAGACAACCAGACCTTTCCATTAGCGCACTACCAAGCTCACCACAAATCCGACGAAGAGCAGCAACTCGCCACCTTCAAGACTCTCAAGAAGGAACGATCCAACAAATGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCAGCGTCGCCGTTTTGATCTTCGCTCTCATCGTTCTGCGCGTCAATTCTCCCACGATCGACCTCTCTTCCGTCTCCCTCGCTAAATTCTCACTCGCTAACGCTTCCAATTCCTCTTCTCCGTCGTTCAATCTCACCTTGATCGCCGCCCTCTCCGTCCGCAATTCGAACTTCGGTCCGTTCAATTTCGATGACGGCACTGTCGGTCTCGTGTACGGCGGCGCGATTGTCGGCGAGAGGAGCACCGGCGGGGGTAGGGCGGAGGCGAAGGGGACGGCGAGGATCAATGTTACTGTTGAAGCTTTCGCGAAGAACGTGAGCGGCGGTCTGAATGATTCGGGGATTTTGAATCTGAGTAGCTTTGCGAGATTGAGAGGCAGAGTTCGTTTGATTCATATTCTGAGGAGGAGGATTTCGTCGGAGATTAGTTGTTCGATTAATCTCGATTTGAATAATCGTCAAATTCAGCATAATTGGGTTTGTGAGTGATGAGAATCGGAATCCATGAACTCCACGAACCTAATTAGTTTAATATTTTTCAAAATTCGTTTCATTTTTTTTTTTTTTAAAGAAATATATAGTTCGAAGTTTGTTACAACTTAATTACAATTTTGGAGGGTTTTTTTATTTTTTTTTTTCGCATACGATATTACGATGTAAATATATGTATGTTTTAACTCTTGTGCAAGATATTTCAATAAAAATATCTCTATTATTGCATATTAGTAATTTAAAAAAATAATAATAATAATTAAGTTATGTGGCTTATTACAG ATGGGCGAAGACAACCAGACCTTTCCATTAGCGCACTACCAAGCTCACCACAAATCCGACGAAGAGCAGCAACTCGCCACCTTCAAGACTCTCAAGAAGGAACGATCCAACAAATGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCAGCGTCGCCGTTTTGATCTTCGCTCTCATCGTTCTGCGCGTCAATTCTCCCACGATCGACCTCTCTTCCGTCTCCCTCGCTAAATTCTCACTCGCTAACGCTTCCAATTCCTCTTCTCCGTCGTTCAATCTCACCTTGATCGCCGCCCTCTCCGTCCGCAATTCGAACTTCGGTCCGTTCAATTTCGATGACGGCACTGTCGGTCTCGTGTACGGCGGCGCGATTGTCGGCGAGAGGAGCACCGGCGGGGGTAGGGCGGAGGCGAAGGGGACGGCGAGGATCAATGTTACTGTTGAAGCTTTCGCGAAGAACGTGAGCGGCGGTCTGAATGATTCGGGGATTTTGAATCTGAGTAGCTTTGCGAGATTGAGAGGCAGAGTTCGTTTGATTCATATTCTGAGGAGGAGGATTTCGTCGGAGATTAGTTGTTCGATTAATCTCGATTTGAATAATCGTCAAATTCAGCATAATTGGGTTTGTGAGTGA MGEDNQTFPLAHYQAHHKSDEEQQLATFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIDLSSVSLAKFSLANASNSSSPSFNLTLIAALSVRNSNFGPFNFDDGTVGLVYGGAIVGERSTGGGRAEAKGTARINVTVEAFAKNVSGGLNDSGILNLSSFARLRGRVRLIHILRRRISSEISCSINLDLNNRQIQHNWVCE Homology
BLAST of Lcy02g013320 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.7e-18 Identity = 77/217 (35.48%), Postives = 118/217 (54.38%), Query Frame = 0
BLAST of Lcy02g013320 vs. ExPASy TrEMBL
Match: A0A1S3ATY3 (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482793 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81 Identity = 166/212 (78.30%), Postives = 189/212 (89.15%), Query Frame = 0
BLAST of Lcy02g013320 vs. ExPASy TrEMBL
Match: A0A5A7TL68 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002140 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 2.5e-81 Identity = 166/212 (78.30%), Postives = 188/212 (88.68%), Query Frame = 0
BLAST of Lcy02g013320 vs. ExPASy TrEMBL
Match: A0A0A0KQT7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 5.7e-78 Identity = 162/212 (76.42%), Postives = 182/212 (85.85%), Query Frame = 0
BLAST of Lcy02g013320 vs. ExPASy TrEMBL
Match: A0A6J1I3M2 (uncharacterized protein LOC111468875 OS=Cucurbita maxima OX=3661 GN=LOC111468875 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 5.0e-74 Identity = 155/213 (72.77%), Postives = 180/213 (84.51%), Query Frame = 0
BLAST of Lcy02g013320 vs. ExPASy TrEMBL
Match: A0A6J1H2C0 (uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC111459739 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 2.1e-64 Identity = 143/211 (67.77%), Postives = 165/211 (78.20%), Query Frame = 0
BLAST of Lcy02g013320 vs. NCBI nr
Match: XP_038875090.1 (late embryogenesis abundant protein At1g64065 [Benincasa hispida]) HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82 Identity = 167/211 (79.15%), Postives = 189/211 (89.57%), Query Frame = 0
BLAST of Lcy02g013320 vs. NCBI nr
Match: XP_008437349.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo]) HSP 1 Score: 312.8 bits (800), Expect = 2.3e-81 Identity = 166/212 (78.30%), Postives = 189/212 (89.15%), Query Frame = 0
BLAST of Lcy02g013320 vs. NCBI nr
Match: KAA0042716.1 (late embryogenesis abundant protein [Cucumis melo var. makuwa]) HSP 1 Score: 311.6 bits (797), Expect = 5.1e-81 Identity = 166/212 (78.30%), Postives = 188/212 (88.68%), Query Frame = 0
BLAST of Lcy02g013320 vs. NCBI nr
Match: XP_004143966.1 (late embryogenesis abundant protein At1g64065 [Cucumis sativus]) HSP 1 Score: 300.4 bits (768), Expect = 1.2e-77 Identity = 162/212 (76.42%), Postives = 182/212 (85.85%), Query Frame = 0
BLAST of Lcy02g013320 vs. NCBI nr
Match: KAE8647845.1 (hypothetical protein Csa_000600 [Cucumis sativus]) HSP 1 Score: 293.9 bits (751), Expect = 1.1e-75 Identity = 160/212 (75.47%), Postives = 180/212 (84.91%), Query Frame = 0
BLAST of Lcy02g013320 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 94.4 bits (233), Expect = 1.2e-19 Identity = 77/217 (35.48%), Postives = 118/217 (54.38%), Query Frame = 0
BLAST of Lcy02g013320 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 67.8 bits (164), Expect = 1.2e-11 Identity = 55/213 (25.82%), Postives = 105/213 (49.30%), Query Frame = 0
BLAST of Lcy02g013320 vs. TAIR 10
Match: AT4G23930.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 45.4 bits (106), Expect = 6.4e-05 Identity = 53/188 (28.19%), Postives = 83/188 (44.15%), Query Frame = 0
BLAST of Lcy02g013320 vs. TAIR 10
Match: AT4G23610.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 42.7 bits (99), Expect = 4.2e-04 Identity = 54/213 (25.35%), Postives = 95/213 (44.60%), Query Frame = 0
BLAST of Lcy02g013320 vs. TAIR 10
Match: AT4G13270.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 41.6 bits (96), Expect = 9.2e-04 Identity = 41/178 (23.03%), Postives = 87/178 (48.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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