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Lcy02g013090 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGCAGCTCCTTCCAAAGATCTTTAAAACATTCAAAGAAAAAGAAGAGAAAGCTCGAAGCTTTAAGCATCCATGGCGTCTATGCAATGCAGCAAACCAGCTGAAAAGAGCCAGCAACAGAAGCACGACCAACACCAACAGGACCATTGCTTTGGCCACATGTCCGACAAGATCAAAGGCGTCTTCAGAGGCCACCATCATGGTCATGGCCAGCCTCCTGCGGCCAATGCCAACTGCGGTCAGTGCAAGCCAGGCCCTAAGAAGAGCGAACACCACAAGAATAAAGAAGGGGGTTTCTTGAACAAGATCAAGGATGCCTTCTCCGACCACAGCGACAGCAGCGACAGCGACGATGACGGTCACAAAGCCCACCACAAAAGGAAGGCAAGTGTTTTGTTTCTTTTACTCTCTCTCTCAAGATTTGTGCAAACATTTCTCCTATGGTTTTTAGAACGTTCATGCTTGGTCTGAACAAATGGTTCGATACTCTTATTCTGAAGTAGCTTTATGAGTTTTGATGTCGGGTCAAAATAGAATTCACCAAGTGTTGGATTGTTTATCAACTGTGAGTTGAGTTTAGTGTCGCGAGATTGATTAGTTTTAAGATAGTAATTTAGGCATAGTAGGCAAGTTTGCCGAGTTATGCTATGGTGCTCATAGTTACTGTCATGGGGTGAGTGAAGACGGAAGAGTGAGGGTAATTAAGTTGAAGTCTTTTTTGTGGTAGAAAAATATGTAGGAAGGGAGATTTGAACCTCAAACCTCGTGATCGAAGGTACATGTTTAGATAGGATCTAGTGCAGTATAGTTGGTATGATTGCACTCACTCAAGTTAATGATCGATTATTAATTTGTCTACAAATACTTGTAGTATTTTCATTTAATAAATCGATTTATCCTTTCTTGCCATTTCTGTTCTGATTTGTAATATTTTCTCTTTGTTTTTCAAGTTACATATGTGATCTAATTCTTTTGCTCGTGTTTGCAGAACTGAAGGGAGAGAAGGAAGGTTGACTGGATTTAAAGGAATTAGAGGCTGCCTCTAAACTACTACTACTAAGGATTTGAGTGAAGCAAATATAAAGATCAATAATGTAGAATAAAGAAGATAATTTGCACAACTCCTACTCTATCTGTTTTTCCTTTTTCTAAATAAAAGTTCTGCATTACTATGTTATCGAGATATGTTATTGATATAGAAACTGAATTCTACCCATCACTGTCTTTTCTTTTCCTTCAATTACGC AGGCAGCTCCTTCCAAAGATCTTTAAAACATTCAAAGAAAAAGAAGAGAAAGCTCGAAGCTTTAAGCATCCATGGCGTCTATGCAATGCAGCAAACCAGCTGAAAAGAGCCAGCAACAGAAGCACGACCAACACCAACAGGACCATTGCTTTGGCCACATGTCCGACAAGATCAAAGGCGTCTTCAGAGGCCACCATCATGGTCATGGCCAGCCTCCTGCGGCCAATGCCAACTGCGGTCAGTGCAAGCCAGGCCCTAAGAAGAGCGAACACCACAAGAATAAAGAAGGGGGTTTCTTGAACAAGATCAAGGATGCCTTCTCCGACCACAGCGACAGCAGCGACAGCGACGATGACGGTCACAAAGCCCACCACAAAAGGAAGAACTGAAGGGAGAGAAGGAAGGTTGACTGGATTTAAAGGAATTAGAGGCTGCCTCTAAACTACTACTACTAAGGATTTGAGTGAAGCAAATATAAAGATCAATAATGTAGAATAAAGAAGATAATTTGCACAACTCCTACTCTATCTGTTTTTCCTTTTTCTAAATAAAAGTTCTGCATTACTATGTTATCGAGATATGTTATTGATATAGAAACTGAATTCTACCCATCACTGTCTTTTCTTTTCCTTCAATTACGC ATGGCGTCTATGCAATGCAGCAAACCAGCTGAAAAGAGCCAGCAACAGAAGCACGACCAACACCAACAGGACCATTGCTTTGGCCACATGTCCGACAAGATCAAAGGCGTCTTCAGAGGCCACCATCATGGTCATGGCCAGCCTCCTGCGGCCAATGCCAACTGCGGTCAGTGCAAGCCAGGCCCTAAGAAGAGCGAACACCACAAGAATAAAGAAGGGGGTTTCTTGAACAAGATCAAGGATGCCTTCTCCGACCACAGCGACAGCAGCGACAGCGACGATGACGGTCACAAAGCCCACCACAAAAGGAAGAACTGA MASMQCSKPAEKSQQQKHDQHQQDHCFGHMSDKIKGVFRGHHHGHGQPPAANANCGQCKPGPKKSEHHKNKEGGFLNKIKDAFSDHSDSSDSDDDGHKAHHKRKN Homology
BLAST of Lcy02g013090 vs. ExPASy TrEMBL
Match: A0A6J1CWW2 (uncharacterized protein LOC111015315 OS=Momordica charantia OX=3673 GN=LOC111015315 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.1e-21 Identity = 71/115 (61.74%), Postives = 81/115 (70.43%), Query Frame = 0
BLAST of Lcy02g013090 vs. ExPASy TrEMBL
Match: A0A1S3AUH3 (uncharacterized protein LOC103482815 OS=Cucumis melo OX=3656 GN=LOC103482815 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.2e-17 Identity = 63/116 (54.31%), Postives = 76/116 (65.52%), Query Frame = 0
BLAST of Lcy02g013090 vs. ExPASy TrEMBL
Match: A0A6J1H399 (glycine-rich cell wall structural protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459722 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.7e-09 Identity = 47/96 (48.96%), Postives = 51/96 (53.12%), Query Frame = 0
BLAST of Lcy02g013090 vs. ExPASy TrEMBL
Match: A0A5A7TMV4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001930 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 7.7e-07 Identity = 42/84 (50.00%), Postives = 49/84 (58.33%), Query Frame = 0
BLAST of Lcy02g013090 vs. NCBI nr
Match: XP_038875375.1 (uncharacterized protein LOC120067846 [Benincasa hispida]) HSP 1 Score: 116.7 bits (291), Expect = 1.2e-22 Identity = 71/113 (62.83%), Postives = 82/113 (72.57%), Query Frame = 0
BLAST of Lcy02g013090 vs. NCBI nr
Match: XP_022146004.1 (uncharacterized protein LOC111015315 [Momordica charantia]) HSP 1 Score: 112.5 bits (280), Expect = 2.3e-21 Identity = 71/115 (61.74%), Postives = 81/115 (70.43%), Query Frame = 0
BLAST of Lcy02g013090 vs. NCBI nr
Match: XP_008437383.1 (PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]) HSP 1 Score: 98.2 bits (243), Expect = 4.4e-17 Identity = 63/116 (54.31%), Postives = 76/116 (65.52%), Query Frame = 0
BLAST of Lcy02g013090 vs. NCBI nr
Match: XP_022958513.1 (glycine-rich cell wall structural protein 1-like [Cucurbita moschata]) HSP 1 Score: 70.9 bits (172), Expect = 7.6e-09 Identity = 47/96 (48.96%), Postives = 51/96 (53.12%), Query Frame = 0
BLAST of Lcy02g013090 vs. NCBI nr
Match: KAA0042689.1 (uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa] >TYK06092.1 uncharacterized protein E5676_scaffold376G001930 [Cucumis melo var. makuwa]) HSP 1 Score: 63.2 bits (152), Expect = 1.6e-06 Identity = 42/84 (50.00%), Postives = 49/84 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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