Lcy02g012760 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g012760
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	WD repeat-containing protein 44
Location	Chr02: 38043406 .. 38043960 (+)
RNA-Seq Expression	Lcy02g012760
Synteny	Lcy02g012760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCTTCTTTTACCTCGGATGGAAAGCATATTGTTTCAGCCAGCGAAGAAAGTGTCTATGTTTGGAACTACAATTGCAAGGACAAAGCATCTCGGAAAAAGAAAATTTGGTCATCCGAAAGCTTCTTCTCTCGTAGCGCGACAATAGCCATACCTTGGTCTGGTGTGAAAATCACACCTGAACCACCATTGTCCCCAGCACGAGTTTGTGATACAGCAGGAAGTATCCCCGAAATGGAGCCGAAGTATCCCGATGATGATGGTGATAGAGAACACAAGGTTCCATCGTCATCACCAGATTGCTTCTCTCTAAGCCGTACCCTTTTTCCCGAGTTGCTCAAAGGAAGTGCAACTTGGCCGGAGGAGAAACTCCATGATTCTAGCTCTATGACCCCTTCACCGTCCATGTGCAAGACTGAGTTCAAGTTTTTGAAGAATGCTTGCCAAAGCATGCTTAGCTCTCCACACATGTGGGGTCTTGTGATCGTAACTGCTGGATGGGATGGACGGATCAGAACATTTCTCAACTACGGTTTGCCTATTCGGTTATGA

mRNA sequence

ATGTCTGCTTCTTTTACCTCGGATGGAAAGCATATTGTTTCAGCCAGCGAAGAAAGTGTCTATGTTTGGAACTACAATTGCAAGGACAAAGCATCTCGGAAAAAGAAAATTTGGTCATCCGAAAGCTTCTTCTCTCGTAGCGCGACAATAGCCATACCTTGGTCTGGTGTGAAAATCACACCTGAACCACCATTGTCCCCAGCACGAGTTTGTGATACAGCAGGAAGTATCCCCGAAATGGAGCCGAAGTATCCCGATGATGATGGTGATAGAGAACACAAGGTTCCATCGTCATCACCAGATTGCTTCTCTCTAAGCCGTACCCTTTTTCCCGAGTTGCTCAAAGGAAGTGCAACTTGGCCGGAGGAGAAACTCCATGATTCTAGCTCTATGACCCCTTCACCGTCCATGTGCAAGACTGAGTTCAAGTTTTTGAAGAATGCTTGCCAAAGCATGCTTAGCTCTCCACACATGTGGGGTCTTGTGATCGTAACTGCTGGATGGGATGGACGGATCAGAACATTTCTCAACTACGGTTTGCCTATTCGGTTATGA

Coding sequence (CDS)

ATGTCTGCTTCTTTTACCTCGGATGGAAAGCATATTGTTTCAGCCAGCGAAGAAAGTGTCTATGTTTGGAACTACAATTGCAAGGACAAAGCATCTCGGAAAAAGAAAATTTGGTCATCCGAAAGCTTCTTCTCTCGTAGCGCGACAATAGCCATACCTTGGTCTGGTGTGAAAATCACACCTGAACCACCATTGTCCCCAGCACGAGTTTGTGATACAGCAGGAAGTATCCCCGAAATGGAGCCGAAGTATCCCGATGATGATGGTGATAGAGAACACAAGGTTCCATCGTCATCACCAGATTGCTTCTCTCTAAGCCGTACCCTTTTTCCCGAGTTGCTCAAAGGAAGTGCAACTTGGCCGGAGGAGAAACTCCATGATTCTAGCTCTATGACCCCTTCACCGTCCATGTGCAAGACTGAGTTCAAGTTTTTGAAGAATGCTTGCCAAAGCATGCTTAGCTCTCCACACATGTGGGGTCTTGTGATCGTAACTGCTGGATGGGATGGACGGATCAGAACATTTCTCAACTACGGTTTGCCTATTCGGTTATGA

Protein sequence

MSASFTSDGKHIVSASEESVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKITPEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGSATWPEEKLHDSSSMTPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYGLPIRL

Homology

[Close]

BLAST of Lcy02g012760 vs. ExPASy TrEMBL
Match: A0A5D3C2B0 (WD repeat-containing protein 44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001640 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 3.9e-99
Identity = 179/186 (96.24%), Postives = 181/186 (97.31%), Query Frame = 0


Query: 1   MSASFTSDGKHIVSASEESVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 60
           MSASFTSDGKHIVSASEE+VYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT
Sbjct: 558 MSASFTSDGKHIVSASEENVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 617

Query: 61  PEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGSATW 120
           PEPPLSP RVCDT G IPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKG+ATW
Sbjct: 618 PEPPLSPTRVCDTTGIIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGTATW 677

Query: 121 PEEKLHDSSSMT--PSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY 180
           PEEKLHDSSSMT  PSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY
Sbjct: 678 PEEKLHDSSSMTPSPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY 737

Query: 181 GLPIRL 185
           GLPIRL
Sbjct: 738 GLPIRL 743

[Close]

BLAST of Lcy02g012760 vs. ExPASy TrEMBL
Match: A0A1S3AUL0 (uncharacterized protein LOC103482847 OS=Cucumis melo OX=3656 GN=LOC103482847 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 3.9e-99
Identity = 179/186 (96.24%), Postives = 181/186 (97.31%), Query Frame = 0


Query: 1   MSASFTSDGKHIVSASEESVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 60
           MSASFTSDGKHIVSASEE+VYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT
Sbjct: 558 MSASFTSDGKHIVSASEENVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 617

Query: 61  PEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGSATW 120
           PEPPLSP RVCDT G IPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKG+ATW
Sbjct: 618 PEPPLSPTRVCDTTGIIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGTATW 677

Query: 121 PEEKLHDSSSMT--PSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY 180
           PEEKLHDSSSMT  PSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY
Sbjct: 678 PEEKLHDSSSMTPSPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY 737

Query: 181 GLPIRL 185
           GLPIRL
Sbjct: 738 GLPIRL 743

[Close]

BLAST of Lcy02g012760 vs. ExPASy TrEMBL
Match: A0A0A0KQQ2 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G148670 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.6e-98
Identity = 178/186 (95.70%), Postives = 180/186 (96.77%), Query Frame = 0


Query: 1   MSASFTSDGKHIVSASEESVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 60
           MSASFTSDGKHIVSASEE+VYVWNYNCKDKASRKKKIWSSESFFSRS TIAIPWSGVKIT
Sbjct: 558 MSASFTSDGKHIVSASEENVYVWNYNCKDKASRKKKIWSSESFFSRSTTIAIPWSGVKIT 617

Query: 61  PEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGSATW 120
           PEPPLSP RVCDT GSIPEMEPKY DDDGDREHKVPSSSPDCFSLSRTLFPELLKG+ATW
Sbjct: 618 PEPPLSPTRVCDTPGSIPEMEPKYSDDDGDREHKVPSSSPDCFSLSRTLFPELLKGTATW 677

Query: 121 PEEKLHDSSSMT--PSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY 180
           PEEKLHDSSSMT  PSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY
Sbjct: 678 PEEKLHDSSSMTPSPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY 737

Query: 181 GLPIRL 185
           GLPIRL
Sbjct: 738 GLPIRL 743

[Close]

BLAST of Lcy02g012760 vs. ExPASy TrEMBL
Match: A0A6J1H0S1 (WD repeat-containing protein 44-like OS=Cucurbita moschata OX=3662 GN=LOC111459356 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.6e-95
Identity = 169/184 (91.85%), Postives = 177/184 (96.20%), Query Frame = 0


Query: 1   MSASFTSDGKHIVSASEESVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 60
           MSASFTSDGKHIVSASEE++YVWNYNCKDKASRKKKIWSSESFFS +A+IAIPWSGVKIT
Sbjct: 558 MSASFTSDGKHIVSASEENIYVWNYNCKDKASRKKKIWSSESFFSHNASIAIPWSGVKIT 617

Query: 61  PEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGSATW 120
           PEPP+SP RVC TA SIPEMEPKYP+DDGD EHKVPSSSPDCFSLSR LFPELLKG+ATW
Sbjct: 618 PEPPVSPTRVCVTAESIPEMEPKYPNDDGDSEHKVPSSSPDCFSLSRNLFPELLKGTATW 677

Query: 121 PEEKLHDSSSMTPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYGL 180
           P EKLHDSSSMTPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYGL
Sbjct: 678 PAEKLHDSSSMTPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYGL 737

Query: 181 PIRL 185
           P+RL
Sbjct: 738 PVRL 741

[Close]

BLAST of Lcy02g012760 vs. ExPASy TrEMBL
Match: A0A6J1HZB8 (uncharacterized protein LOC111469017 OS=Cucurbita maxima OX=3661 GN=LOC111469017 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.5e-95
Identity = 173/185 (93.51%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MSASFTSDGKHIVSASEESVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 60
           MSASFTSDGKHIVSASEE+VYVWNYNCKDKASRKKKIWSSESFFSRSA IAIPWSGVKIT
Sbjct: 565 MSASFTSDGKHIVSASEENVYVWNYNCKDKASRKKKIWSSESFFSRSAAIAIPWSGVKIT 624

Query: 61  PEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGSATW 120
           PEPPLSP +VC+TAGSI EMEPKYPDD+GDREHKVPSSSPDCFSLSRTLFPELLKG+ATW
Sbjct: 625 PEPPLSPTQVCNTAGSILEMEPKYPDDNGDREHKVPSSSPDCFSLSRTLFPELLKGTATW 684

Query: 121 PEEKLHDSSSM-TPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYG 180
           PEEKLHDSSS+ TP PSMCKTEFK LKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYG
Sbjct: 685 PEEKLHDSSSITTPFPSMCKTEFKLLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYG 744

Query: 181 LPIRL 185
           LPIRL
Sbjct: 745 LPIRL 749

[Close]

BLAST of Lcy02g012760 vs. NCBI nr
Match: XP_038907269.1 (mitochondrial division protein 1-like [Benincasa hispida])

HSP 1 Score: 376.3 bits (965), Expect = 1.5e-100
Identity = 179/184 (97.28%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MSASFTSDGKHIVSASEESVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 60
           MSASFTSDGKHIVSASEE+VYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT
Sbjct: 559 MSASFTSDGKHIVSASEENVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 618

Query: 61  PEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGSATW 120
           PEPPLSP RVCDTAGSIPEMEPK+PDDDGDREHKVPSSSPDCFSLSRTLFPELLKG+ATW
Sbjct: 619 PEPPLSPTRVCDTAGSIPEMEPKFPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGTATW 678

Query: 121 PEEKLHDSSSMTPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYGL 180
           PEEKLHDSSS+TPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYGL
Sbjct: 679 PEEKLHDSSSITPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYGL 738

Query: 181 PIRL 185
           PIRL
Sbjct: 739 PIRL 742

[Close]

BLAST of Lcy02g012760 vs. NCBI nr
Match: XP_008437430.1 (PREDICTED: uncharacterized protein LOC103482847 [Cucumis melo] >KAA0042661.1 WD repeat-containing protein 44 [Cucumis melo var. makuwa] >TYK06063.1 WD repeat-containing protein 44 [Cucumis melo var. makuwa])

HSP 1 Score: 370.5 bits (950), Expect = 8.1e-99
Identity = 179/186 (96.24%), Postives = 181/186 (97.31%), Query Frame = 0


Query: 1   MSASFTSDGKHIVSASEESVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 60
           MSASFTSDGKHIVSASEE+VYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT
Sbjct: 558 MSASFTSDGKHIVSASEENVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 617

Query: 61  PEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGSATW 120
           PEPPLSP RVCDT G IPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKG+ATW
Sbjct: 618 PEPPLSPTRVCDTTGIIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGTATW 677

Query: 121 PEEKLHDSSSMT--PSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY 180
           PEEKLHDSSSMT  PSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY
Sbjct: 678 PEEKLHDSSSMTPSPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY 737

Query: 181 GLPIRL 185
           GLPIRL
Sbjct: 738 GLPIRL 743

[Close]

BLAST of Lcy02g012760 vs. NCBI nr
Match: XP_004143851.1 (uncharacterized protein LOC101204856 [Cucumis sativus] >KGN49996.1 hypothetical protein Csa_000565 [Cucumis sativus])

HSP 1 Score: 367.9 bits (943), Expect = 5.3e-98
Identity = 178/186 (95.70%), Postives = 180/186 (96.77%), Query Frame = 0


Query: 1   MSASFTSDGKHIVSASEESVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 60
           MSASFTSDGKHIVSASEE+VYVWNYNCKDKASRKKKIWSSESFFSRS TIAIPWSGVKIT
Sbjct: 558 MSASFTSDGKHIVSASEENVYVWNYNCKDKASRKKKIWSSESFFSRSTTIAIPWSGVKIT 617

Query: 61  PEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGSATW 120
           PEPPLSP RVCDT GSIPEMEPKY DDDGDREHKVPSSSPDCFSLSRTLFPELLKG+ATW
Sbjct: 618 PEPPLSPTRVCDTPGSIPEMEPKYSDDDGDREHKVPSSSPDCFSLSRTLFPELLKGTATW 677

Query: 121 PEEKLHDSSSMT--PSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY 180
           PEEKLHDSSSMT  PSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY
Sbjct: 678 PEEKLHDSSSMTPSPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNY 737

Query: 181 GLPIRL 185
           GLPIRL
Sbjct: 738 GLPIRL 743

[Close]

BLAST of Lcy02g012760 vs. NCBI nr
Match: XP_023520540.1 (uncharacterized protein LOC111783949 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.8 bits (922), Expect = 1.4e-95
Identity = 174/185 (94.05%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MSASFTSDGKHIVSASEESVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 60
           MSASFTSDGKHIVSASEE+VYVWNYNCKDKASRKKKIWSSESFFSRSA IAIPWSGVKIT
Sbjct: 565 MSASFTSDGKHIVSASEENVYVWNYNCKDKASRKKKIWSSESFFSRSAAIAIPWSGVKIT 624

Query: 61  PEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGSATW 120
           PEPPLSP +VC+TAGSI EMEPKYPDD+GDREHKVPSSSPDCFSLSRTLFPELLKG+ATW
Sbjct: 625 PEPPLSPTQVCNTAGSILEMEPKYPDDNGDREHKVPSSSPDCFSLSRTLFPELLKGTATW 684

Query: 121 PEEKLHDSSSM-TPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYG 180
           PEEKLHDSSS+ TPSPSMCKTEFK LKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYG
Sbjct: 685 PEEKLHDSSSITTPSPSMCKTEFKLLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYG 744

Query: 181 LPIRL 185
           LPIRL
Sbjct: 745 LPIRL 749

[Close]

BLAST of Lcy02g012760 vs. NCBI nr
Match: KAG7035506.1 (WD repeat-containing protein 44 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.8 bits (917), Expect = 5.5e-95
Identity = 169/184 (91.85%), Postives = 177/184 (96.20%), Query Frame = 0


Query: 1   MSASFTSDGKHIVSASEESVYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 60
           MSASFTSDGKHIVSASEE++YVWNYNCKDKASRKKKIWSSESFFS +A+IAIPWSGVKIT
Sbjct: 558 MSASFTSDGKHIVSASEENIYVWNYNCKDKASRKKKIWSSESFFSHNASIAIPWSGVKIT 617

Query: 61  PEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKGSATW 120
           PEPP+SP RVC TA SIPEMEPKYP+DDGD EHKVPSSSPDCFSLSR LFPELLKG+ATW
Sbjct: 618 PEPPVSPTRVCITAESIPEMEPKYPNDDGDSEHKVPSSSPDCFSLSRNLFPELLKGTATW 677

Query: 121 PEEKLHDSSSMTPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYGL 180
           P EKLHDSSSMTPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYGL
Sbjct: 678 PAEKLHDSSSMTPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYGL 737

Query: 181 PIRL 185
           P+RL
Sbjct: 738 PVRL 741

[Close]

BLAST of Lcy02g012760 vs. TAIR 10
Match: AT5G24320.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 4.7e-28
Identity = 81/192 (42.19%), Postives = 105/192 (54.69%), Query Frame = 0


Query: 1   MSASFTSDGKHIVSASEE-SVYVWNYNCKD---------KASRKKKIWSSESFFSRSATI 60
           +SASFT+DGKHIVSA ++ SVYVWN    D           +++ KI S E  FS   ++
Sbjct: 539 ISASFTADGKHIVSACDDSSVYVWNCVGHDPEQSSPGFFSHTKRLKIRSFEK-FSADVSV 598

Query: 61  AIPWSGVKITPEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLF 120
           AIPW G      P LS        GS                      SP  FSL R   
Sbjct: 599 AIPWCGF----TPVLS-------GGS--------------------ELSPSLFSLGREYV 658

Query: 121 PELLKGSATWPEEKLHDSSSMTPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDG 180
            +  KGSATWPEEKL  +SS +P  ++ ++ +KFL+++C+    S H+WGLVIVT GWDG
Sbjct: 659 LDSPKGSATWPEEKL--ASSFSPVKAIRRSHYKFLRSSCRRTSESSHLWGLVIVTGGWDG 696

Query: 181 RIRTFLNYGLPI 183
           RI+ F NYGLP+
Sbjct: 719 RIKLFHNYGLPV 696

[Close]

BLAST of Lcy02g012760 vs. TAIR 10
Match: AT5G24320.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 4.7e-28
Identity = 81/192 (42.19%), Postives = 105/192 (54.69%), Query Frame = 0


Query: 1   MSASFTSDGKHIVSASEE-SVYVWNYNCKD---------KASRKKKIWSSESFFSRSATI 60
           +SASFT+DGKHIVSA ++ SVYVWN    D           +++ KI S E  FS   ++
Sbjct: 535 ISASFTADGKHIVSACDDSSVYVWNCVGHDPEQSSPGFFSHTKRLKIRSFEK-FSADVSV 594

Query: 61  AIPWSGVKITPEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLF 120
           AIPW G      P LS        GS                      SP  FSL R   
Sbjct: 595 AIPWCGF----TPVLS-------GGS--------------------ELSPSLFSLGREYV 654

Query: 121 PELLKGSATWPEEKLHDSSSMTPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDG 180
            +  KGSATWPEEKL  +SS +P  ++ ++ +KFL+++C+    S H+WGLVIVT GWDG
Sbjct: 655 LDSPKGSATWPEEKL--ASSFSPVKAIRRSHYKFLRSSCRRTSESSHLWGLVIVTGGWDG 692

Query: 181 RIRTFLNYGLPI 183
           RI+ F NYGLP+
Sbjct: 715 RIKLFHNYGLPV 692

[Close]

BLAST of Lcy02g012760 vs. TAIR 10
Match: AT1G64610.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 3.7e-25
Identity = 77/188 (40.96%), Postives = 98/188 (52.13%), Query Frame = 0


Query: 2   SASFTSDGKHIVSASEES-VYVWNY----NCKDKASRKKKIWSSESFFSRSATIAIPWSG 61
           SASF SDGKHI+S SE+S + VW+Y    + K  +   K I S E F S +A++AIPW  
Sbjct: 502 SASFISDGKHIISTSEDSYINVWSYSQLPSKKPYSETPKSIRSYEGFLSHNASVAIPW-- 561

Query: 62  VKITPEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKG 121
                   L   R    +  I +++ K P               DCFS         +KG
Sbjct: 562 --------LRQGRRDGLSECITDLDMKIP-------------KVDCFS--------PMKG 621

Query: 122 SATWPEEKLHDSSSMTPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFL 181
           S TWPEEKL D +         + + K L++A Q     PH+WGLVIVTA WDGRIR F 
Sbjct: 622 STTWPEEKLEDVAMSN------RGKLKLLRSAWQ-----PHLWGLVIVTATWDGRIRVFH 647

Query: 182 NYGLPIRL 185
           NYGLPIR+
Sbjct: 682 NYGLPIRV 647

[Close]

BLAST of Lcy02g012760 vs. TAIR 10
Match: AT1G64610.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 3.7e-25
Identity = 77/188 (40.96%), Postives = 98/188 (52.13%), Query Frame = 0


Query: 2   SASFTSDGKHIVSASEES-VYVWNY----NCKDKASRKKKIWSSESFFSRSATIAIPWSG 61
           SASF SDGKHI+S SE+S + VW+Y    + K  +   K I S E F S +A++AIPW  
Sbjct: 502 SASFISDGKHIISTSEDSYINVWSYSQLPSKKPYSETPKSIRSYEGFLSHNASVAIPW-- 561

Query: 62  VKITPEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFPELLKG 121
                   L   R    +  I +++ K P               DCFS         +KG
Sbjct: 562 --------LRQGRRDGLSECITDLDMKIP-------------KVDCFS--------PMKG 621

Query: 122 SATWPEEKLHDSSSMTPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFL 181
           S TWPEEKL D +         + + K L++A Q     PH+WGLVIVTA WDGRIR F 
Sbjct: 622 STTWPEEKLEDVAMSN------RGKLKLLRSAWQ-----PHLWGLVIVTATWDGRIRVFH 647

Query: 182 NYGLPIRL 185
           NYGLPIR+
Sbjct: 682 NYGLPIRV 647

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BLAST of Lcy02g012760 vs. TAIR 10
Match: AT5G53500.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 4.9e-25
Identity = 76/183 (41.53%), Postives = 97/183 (53.01%), Query Frame = 0


Query: 2   SASFTSDGKHIVSASEES-VYVWNYNCKDKASRKKKIWSSESFFSRSATIAIPWSGVKIT 61
           SAS TSDGKHIVSA E+S VY+W+    D+ S  KKI S E  FS +A++A  W G    
Sbjct: 508 SASLTSDGKHIVSACEDSNVYIWS---NDEESETKKIRSFER-FSANASVAATWCGF--- 567

Query: 62  PEPPLSPARVCDTAGSIPEMEPKYPDDDGDREHKVPSSSPDCFSLSRTLFP-ELLKGSAT 121
                                        D    +P SSP C S +    P  + KGSAT
Sbjct: 568 ----------------------------SDHNTTLPFSSPSCLSHNEGFVPGSISKGSAT 627

Query: 122 WPEEKLHDSSSMTPSPSMCKTEFKFLKNACQSMLSSPHMWGLVIVTAGWDGRIRTFLNYG 181
           WPEE L   ++   + +M  + +KFLK++ Q   SS   WG+VIVT GWDG+IRTF NYG
Sbjct: 628 WPEENL--PANPLSTSAMNASHYKFLKSSYQ-RASSSLSWGMVIVTGGWDGQIRTFQNYG 652

Query: 182 LPI 183
           LP+
Sbjct: 688 LPV 652

The following BLAST results are available for this feature:

BLAST of Lcy02g012760 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy02g012760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C2B0	3.9e-99	96.24	WD repeat-containing protein 44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3AUL0	3.9e-99	96.24	uncharacterized protein LOC103482847 OS=Cucumis melo OX=3656 GN=LOC103482847 PE=...	[more]
A0A0A0KQQ2	2.6e-98	95.70	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G...	[more]
A0A6J1H0S1	2.6e-95	91.85	WD repeat-containing protein 44-like OS=Cucurbita moschata OX=3662 GN=LOC1114593...	[more]
A0A6J1HZB8	3.5e-95	93.51	uncharacterized protein LOC111469017 OS=Cucurbita maxima OX=3661 GN=LOC111469017...	[more]

BLAST of Lcy02g012760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907269.1	1.5e-100	97.28	mitochondrial division protein 1-like [Benincasa hispida]	[more]
XP_008437430.1	8.1e-99	96.24	PREDICTED: uncharacterized protein LOC103482847 [Cucumis melo] >KAA0042661.1 WD ...	[more]
XP_004143851.1	5.3e-98	95.70	uncharacterized protein LOC101204856 [Cucumis sativus] >KGN49996.1 hypothetical ...	[more]
XP_023520540.1	1.4e-95	94.05	uncharacterized protein LOC111783949 [Cucurbita pepo subsp. pepo]	[more]
KAG7035506.1	5.5e-95	91.85	WD repeat-containing protein 44 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lcy02g012760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24320.2	4.7e-28	42.19	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24320.1	4.7e-28	42.19	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G64610.1	3.7e-25	40.96	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G64610.2	3.7e-25	40.96	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G53500.1	4.9e-25	41.53	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..97
None	No IPR available	PANTHER	PTHR14221:SF29	TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN	coord: 1..184
IPR040324	WD repeat-containing protein WDR44/Dgr2	PANTHER	PTHR14221	WD REPEAT DOMAIN 44	coord: 1..184
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 2..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g012760.1	Lcy02g012760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding