Lcy02g012380 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g012380
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Avr9/Cf-9 rapidly elicited protein
Location	Chr02: 37299966 .. 37300597 (-)
RNA-Seq Expression	Lcy02g012380
Synteny	Lcy02g012380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAACTCCAAATCTCTTCCAATTCCCACACCAACCTCCAAATTCCAATCAAATCGCAGAAGAAGAAGAAGAAGAAGAAGATGAATTCCATGTTCAGTTTGTTCGATGCCTTCGCCGCCGAATTCCTCCTCGGCAACTTCGTTAGGGCTTCTTCCTCTGTCCCTTCCTTCACTCCCGACAACGCCGGCTCTGCCTCTTCCGCCTCCGTCGTGAAGTCGCCGCCGATCAACAAGGAAGAACCTAAGCCCAACAATTCCTCGATCAGGCCCAGATTTGCTCTCGAGTTCGATGGCCTCAATTGCTTCGAGACTCTCGTCCCCAATTGAGGTCTTCGTCCTTCAATCTAACTCATTCTTTTCATTCTTTTAGTTTTAGGTTTAAATTAGGTTTTACGAGATCTCGCGATTATACTGTATGAATGCAGAGTGCTCTTTTTTACGGAATTACATGATTCCTTCTGTTCTGCGTTTCGCTGGGATTTGGATATCAAATCGCACCGTTCGCTGATTCATCACCCTTGTTCTTCCATGATTTTCTTCTTCTACGATCTTGAAAATTATTTCTGGAAACTTGAATTTTGAATTTTAAATTATTACTGCAACCATACTTTTGTATAGAATATGAATTTAGAT

mRNA sequence

ATAAACTCCAAATCTCTTCCAATTCCCACACCAACCTCCAAATTCCAATCAAATCGCAGAAGAAGAAGAAGAAGAAGAAGATGAATTCCATGTTCAGTTTGTTCGATGCCTTCGCCGCCGAATTCCTCCTCGGCAACTTCGTTAGGGCTTCTTCCTCTGTCCCTTCCTTCACTCCCGACAACGCCGGCTCTGCCTCTTCCGCCTCCGTCGTGAAGTCGCCGCCGATCAACAAGGAAGAACCTAAGCCCAACAATTCCTCGATCAGGCCCAGATTTGCTCTCGAGTTCGATGGCCTCAATTGCTTCGAGACTCTCGTCCCCAATTGAGGTCTTCGTCCTTCAATCTAACTCATTCTTTTCATTCTTTTAGTTTTAGGTTTAAATTAGGTTTTACGAGATCTCGCGATTATACTGTATGAATGCAGAGTGCTCTTTTTTACGGAATTACATGATTCCTTCTGTTCTGCGTTTCGCTGGGATTTGGATATCAAATCGCACCGTTCGCTGATTCATCACCCTTGTTCTTCCATGATTTTCTTCTTCTACGATCTTGAAAATTATTTCTGGAAACTTGAATTTTGAATTTTAAATTATTACTGCAACCATACTTTTGTATAGAATATGAATTTAGAT

Coding sequence (CDS)

ATGAATTCCATGTTCAGTTTGTTCGATGCCTTCGCCGCCGAATTCCTCCTCGGCAACTTCGTTAGGGCTTCTTCCTCTGTCCCTTCCTTCACTCCCGACAACGCCGGCTCTGCCTCTTCCGCCTCCGTCGTGAAGTCGCCGCCGATCAACAAGGAAGAACCTAAGCCCAACAATTCCTCGATCAGGCCCAGATTTGCTCTCGAGTTCGATGGCCTCAATTGCTTCGAGACTCTCGTCCCCAATTGA

Protein sequence

MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPDNAGSASSASVVKSPPINKEEPKPNNSSIRPRFALEFDGLNCFETLVPN

Homology

[Close]

BLAST of Lcy02g012380 vs. ExPASy TrEMBL
Match: A0A5D3C6N3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001400 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.5e-23
Identity = 62/84 (73.81%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 1  MNSMFSLFDAFAAEFLLG-NFVRASSSVPSFTPDNAGSASSASVVKS--PPINKEEPKPN 60
          MNSMFSLFDAFAAEFLLG NFVRASSS+PSFTP+N  + +++S V    P   KEEPKP 
Sbjct: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNNAASSAVPKPLPSKKKEEPKPK 60

Query: 61 NSSIRPRFALEFDGLNCFETLVPN 82
          NSS++PRFALE DGLNCFETLVPN
Sbjct: 61 NSSVKPRFALELDGLNCFETLVPN 84

[Close]

BLAST of Lcy02g012380 vs. ExPASy TrEMBL
Match: A0A0A0KJT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146930 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.5e-22
Identity = 61/81 (75.31%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 1  MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPDNAGSASSASVVKSPPINKEEPKPNNSS 60
          MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTP+N  +AS A     P   +EEPK  NS 
Sbjct: 1  MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPNN-NNASPAVPKPLPSKKEEEPKSKNSL 60

Query: 61 IRPRFALEFDGLNCFETLVPN 82
          ++PRFALE DGLNCFETLVPN
Sbjct: 61 MKPRFALELDGLNCFETLVPN 80

[Close]

BLAST of Lcy02g012380 vs. ExPASy TrEMBL
Match: A0A6J1EM23 (uncharacterized protein LOC111435766 OS=Cucurbita moschata OX=3662 GN=LOC111435766 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.7e-19
Identity = 58/86 (67.44%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 1  MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPDNAGSASSASV-VKSPPINKEE----PK 60
          MNSMFS FDAFAAE LLG FV AS+SVPSFTP+  G  S++S  VKS P  KEE     K
Sbjct: 1  MNSMFSFFDAFAAEILLGKFVTASTSVPSFTPNTGGGGSASSAPVKSMPGKKEEANAVAK 60

Query: 61 PNNSSIRPRFALEFDGLNCFETLVPN 82
            NS ++PRFALE DGLNCFETLVPN
Sbjct: 61 SKNSLMKPRFALELDGLNCFETLVPN 86

[Close]

BLAST of Lcy02g012380 vs. ExPASy TrEMBL
Match: A0A6J1E0L6 (uncharacterized protein LOC111026066 OS=Momordica charantia OX=3673 GN=LOC111026066 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.0e-11
Identity = 50/86 (58.14%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 1  MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPDNAGSASSASVVKSPPINK-----EEPK 60
          MNSMFSLFDAFAAE L+    RASS   SF P+N    S    VKSPP N      E+PK
Sbjct: 1  MNSMFSLFDAFAAELLMAKTFRASS---SFAPNNGSGGS----VKSPPSNAAPDNLEQPK 60

Query: 61 PNNSSI--RPRFALEFDGLNCFETLV 80
           N +S+   PR A EFDGLNCFETLV
Sbjct: 61 SNKNSLLRPPRLAPEFDGLNCFETLV 79

[Close]

BLAST of Lcy02g012380 vs. ExPASy TrEMBL
Match: A0A7J6FVL8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_020198 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.3e-06
Identity = 39/82 (47.56%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 1  MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPDNAGSASSASVVK---SPPINKEEPKPN 60
          MNS+FS FD F+AE LLG  V +  + PS + +N  S       K   S P   ++ K  
Sbjct: 1  MNSLFSSFDIFSAEMLLGKNVMSFYASPSSSANNCKSIKQQEDHKNRGSQPQEAQQKKIG 60

Query: 61 NSSIRPRFALEFDGLNCFETLV 80
          +SS  PR ALEFDGLNCFET V
Sbjct: 61 SSSPAPRLALEFDGLNCFETFV 82

[Close]

BLAST of Lcy02g012380 vs. NCBI nr
Match: KAA0042638.1 (uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa] >TYK06039.1 uncharacterized protein E5676_scaffold376G001400 [Cucumis melo var. makuwa])

HSP 1 Score: 116.7 bits (291), Expect = 9.3e-23
Identity = 62/84 (73.81%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 1  MNSMFSLFDAFAAEFLLG-NFVRASSSVPSFTPDNAGSASSASVVKS--PPINKEEPKPN 60
          MNSMFSLFDAFAAEFLLG NFVRASSS+PSFTP+N  + +++S V    P   KEEPKP 
Sbjct: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNNAASSAVPKPLPSKKKEEPKPK 60

Query: 61 NSSIRPRFALEFDGLNCFETLVPN 82
          NSS++PRFALE DGLNCFETLVPN
Sbjct: 61 NSSVKPRFALELDGLNCFETLVPN 84

[Close]

BLAST of Lcy02g012380 vs. NCBI nr
Match: XP_011654674.1 (uncharacterized protein LOC105435432 [Cucumis sativus])

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-21
Identity = 61/81 (75.31%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 1  MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPDNAGSASSASVVKSPPINKEEPKPNNSS 60
          MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTP+N  +AS A     P   +EEPK  NS 
Sbjct: 1  MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPNN-NNASPAVPKPLPSKKEEEPKSKNSL 60

Query: 61 IRPRFALEFDGLNCFETLVPN 82
          ++PRFALE DGLNCFETLVPN
Sbjct: 61 MKPRFALELDGLNCFETLVPN 80

[Close]

BLAST of Lcy02g012380 vs. NCBI nr
Match: XP_023522684.1 (uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-18
Identity = 57/86 (66.28%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 1  MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPDNAGSASSASV-VKSPPINKEE----PK 60
          MNSMFS FDAFAAE L+G FV AS+SVPSFTP+  G  S++S  VKS P  K+E     K
Sbjct: 1  MNSMFSFFDAFAAEILIGKFVTASTSVPSFTPNTGGGGSASSAPVKSMPGKKDEANAVAK 60

Query: 61 PNNSSIRPRFALEFDGLNCFETLVPN 82
            NSS++PRFALE DGLNCFETLVPN
Sbjct: 61 SKNSSMKPRFALELDGLNCFETLVPN 86

[Close]

BLAST of Lcy02g012380 vs. NCBI nr
Match: KAG6579594.1 (hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-18
Identity = 58/86 (67.44%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 1   MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPDNAGSASSASV-VKSPPINKEE----PK 60
           MNSMFS FDAFAAE LLG FV AS+SVPSFTP+  G  S++S  VKS P  KEE     K
Sbjct: 81  MNSMFSFFDAFAAEILLGKFVTASTSVPSFTPNTGGGGSASSAPVKSMPGKKEEANAVAK 140

Query: 61  PNNSSIRPRFALEFDGLNCFETLVPN 82
             NS ++PRFALE DGLNCFETLVPN
Sbjct: 141 SKNSLMKPRFALELDGLNCFETLVPN 166

[Close]

BLAST of Lcy02g012380 vs. NCBI nr
Match: XP_022929066.1 (uncharacterized protein LOC111435766 [Cucurbita moschata] >KAG7017054.1 hypothetical protein SDJN02_22166, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-18
Identity = 58/86 (67.44%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 1  MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPDNAGSASSASV-VKSPPINKEE----PK 60
          MNSMFS FDAFAAE LLG FV AS+SVPSFTP+  G  S++S  VKS P  KEE     K
Sbjct: 1  MNSMFSFFDAFAAEILLGKFVTASTSVPSFTPNTGGGGSASSAPVKSMPGKKEEANAVAK 60

Query: 61 PNNSSIRPRFALEFDGLNCFETLVPN 82
            NS ++PRFALE DGLNCFETLVPN
Sbjct: 61 SKNSLMKPRFALELDGLNCFETLVPN 86

[Close]

BLAST of Lcy02g012380 vs. TAIR 10
Match: AT1G32928.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 9.0e-08
Identity = 38/83 (45.78%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 1  MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPDNAGSASSASVVK-SPPINKEEPKPNNS 60
          MNSMFS FDA  AE ++G  V A+S V     ++A S+SS      S  + K+E    N 
Sbjct: 1  MNSMFSAFDAMCAE-IMGKKVTAASYVYRSERNSASSSSSVGGQNASLSLKKDEKASKNM 60

Query: 61 SI---RPRFALEFDGLNCFETLV 80
           +    PRFALE DGL+CFET+V
Sbjct: 61 DLPTKTPRFALELDGLHCFETIV 82

[Close]

BLAST of Lcy02g012380 vs. TAIR 10
Match: AT1G32920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32928.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 2.2e-06
Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 1  MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPDNAGSASSASVVKSPPINKEEPKPNNSS 60
          MNSMFS FDA  AE ++G  + AS    SFT   A +  +A+     P  + + K N SS
Sbjct: 1  MNSMFSAFDALFAE-VMGKNLMAS----SFTATTATTKPAAA-----PQTQTQEKANASS 60

Query: 61 IR-------PRFALEFDGLNCFETLV 80
           +       PRFALE DGL+CFET+V
Sbjct: 61 KKIGLVQKIPRFALELDGLHCFETIV 76

The following BLAST results are available for this feature:

BLAST of Lcy02g012380 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy02g012380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C6N3	4.5e-23	73.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KJT8	6.5e-22	75.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146930 PE=4 SV=1	[more]
A0A6J1EM23	6.7e-19	67.44	uncharacterized protein LOC111435766 OS=Cucurbita moschata OX=3662 GN=LOC1114357...	[more]
A0A6J1E0L6	4.0e-11	58.14	uncharacterized protein LOC111026066 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]
A0A7J6FVL8	1.3e-06	47.56	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_020198 PE=4 SV=1	[more]

BLAST of Lcy02g012380 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042638.1	9.3e-23	73.81	uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_011654674.1	1.3e-21	75.31	uncharacterized protein LOC105435432 [Cucumis sativus]	[more]
XP_023522684.1	1.1e-18	66.28	uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo]	[more]
KAG6579594.1	1.4e-18	67.44	hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022929066.1	1.4e-18	67.44	uncharacterized protein LOC111435766 [Cucurbita moschata] >KAG7017054.1 hypothet...	[more]

BLAST of Lcy02g012380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32928.1	9.0e-08	45.78	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G32920.1	2.2e-06	44.19	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..56
None	No IPR available	PANTHER	PTHR33641	OS06G0133500 PROTEIN	coord: 1..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g012380.1	Lcy02g012380.1	mRNA