Lcy02g012280 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g012280
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	50S ribosomal protein L11
Location	Chr02: 37165451 .. 37170221 (-)
RNA-Seq Expression	Lcy02g012280
Synteny	Lcy02g012280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCCCAAAAAAGTATTTTTCAAGTAACCTGGCAAAAACCCAACTTAAAAAACAGAACTTTTATTTCATTTTGCAGGGTTTATCCAAAAAATTTCTGAGAGCTCTCTGTGTTTGCTTATCTATGGCTTCTTCCCTCTCCACCTATCATCAACACCATCTTCTTTCTCCTTCATTTTCTTCAAAAATTACTACTAATGGCAAGCAGCTCTCCTCTCCATTTTTCACTTCACCCTCTTCAGGGTTGTCTTCAAAGTTCAATTTCTCGCTTCGGTTCCTCAGCAATGGCAAATCTTCGTCCCTCATCTCTCCCACTCCAAGGCGTCTCAGTGTCGTCTCAATGGCGCCCCCTAAAGCCAAGCCTGGTGGAAAAGCCAAGAAAGGTAAATTTCTAATTCTGATAGACCCTTAATTTCCTTCAACATTATCCATAATTGGGCTGTGATTTTGTCTGATTTGCTTTTGGGATTTACAGTAATTGGGATGATTAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTTGGCCCTGCTCTTGGTTCGAAGGGTGTTAATATCATGGCCTTTTGTAAGGATTACAATGCCAAGACAGCGGACAAGGCCGGCTATGTGATTCCAGTTGAAATTACTGTTTACGATGTGGGTTTGTCCTTTCTTTCCCTTTTGTTCTCTGTGAATGCTTCGTTATGCCTTCCTTTGGCAATGGCTTAATTGTTTGATTTGGAACAGGATAAAAGTTTTACTTTCGTGCTGAAGACTCCGCCTGCTTCTGTTCTTCTTCTCAAGGCTGCTGGTATTTCCCTTTAAGTGTTTGATGCTCTTTTGGCCGTTCCATTTGTTACTTTTCTGTTAATATCTGCTACTATGTTCATCCAATTTTTCCCTTCCCTTATTTGTGCCAATTGGAATGCCTTTTTGCAAACCCATTTGGCCTCCCTTGTGTATTCGTTCTCTTTGATTTAATGAAAATTTGTCTGTTTCTTCTTGAAAATTGTTTAGTCAACTTTTGTTTACGGGGGTGGGCAGGGCTGGGAGGAGAATTAGTGAGGTTACTTACCAAGTTGCTAAACAGATTTCTAATTGTAACTCCTTACTGAGATGTTGGCTATATTAGGATCAATATCTGGTTTATATTAAAAAACAGTAACTTATTTAGATTGGTCAAATCTAGGAGAAGGCTTCAGGGCTTAGAGTGGATTTAGACAAAACTCTGGTGGCAGAGATCAATGTTCTTAATAAGCATTCTACAGCAGTGGGCCTTGATTTCAGGTCCGAGGTGGGAAATGGCCCCTGGATTACCTTGATATATAGTTAGGTAACAATCCTAGAAGTTAAGTATTTTGGATCCCATAGTTGAAGAAATTGATGAGAAGATAAATGGAAGAAGGCTACATCTTTAGGAGGCGATATCTAATTCGCCCATGTATTTATTTTTTTTAGTTTTCAAATTTCCATATGGTTGCAAGGAAGGTGGACCAAATCCGAAGGGATTTCTTTTTGAGGCCCCTAAAGCAAGAAGTTTTCTGGTACCTATCCTTATTCATTCTTTTTTTGATGAATAACCATGCTTTCATTGAGAAAAAATGAAAGAATACAAGGGCGACAAAAAAGCCAGCCCACAAAAAAAGAAAGACCCCATTAGATAAAGGGGCTCCAATCCAAAATAATAAGACCTATGGGATAATTACAAAATAAGCGCGTCACCGACGCCCAAAGAGAAATGTTATATCTCACAAGAGACCAAACCTTAGTTGAGTCCCTCTCAAACCCTCTAAATGTCCTATTATTTCTCTCACCCCAAAGCCCCCAAATAATAGCGCAAGTCCCCGCTTGCCACAAGAATCTCCCCTGTTCACGAAAAGAGGGATGGGGGAGGAACTCCTTGATCATCTCTCTAAGGCCCCTGTGCCTAGCAAACTGCAAACCAAACGAGACAAAAAAACATGTCCCACATAGCCCTAGCAAAACTGCACCTCCACAAAATATGGTCGAGGTCTTCCTCCGCCATCCGACAGGTAATGCAACAAAAAGGCTCAATCAAGCAAGTGATCTTTCTGGAGAGCCGATCAGGCCCGAGCCAATCAAGCAAGGTACCTATCCTTATTCATTGGAACATAACTTTGAGATTCAGCCTATGGAGGAATGGGCACTTGCAATTGCAACAGTAACAGGAGGAATGTTGTTCTATTTACCAAAATGCTGCAGATGTTTCCTGATGAGGTAGAGAAGTTTTGTGGCATATGGTGATTGCTGCTAAGTATGGTGTTGTAGGTTCCTTTGGATGCTGATTCATGACGAACAGCCAAGCTTATTGTAGTTCTTCATGGCCAAGCCGGCAATCTAAATCCCTAAGAAAACTAGGATGGTAGTTGCCAGTTGAACTGGAAGTAGGCTTGTCTTTTAGGCTGCAGTGTAGTGAAGATAGTGGCAACTGGTATTGTATTTCTGGAGGAATTCAATGGTCAGAAGGTTGATAATTGGTTGGGAATTTTGTCCATTGTTAATTTCTCTCTCCTTTCATGAAGGGCATATGGGCTGTTTTTCAAGGTAATACATGATCAGGAAGTTAATAATTGGTTGGGTATTTGGTGCAAGCTTCTCTTTTGGTCTGTCACTTTGGAAGCCAATGCCTCTCTGCTTTTTGTTTTCGAAAAAATTGGAAAGGATGACCTATCTTAAATAGAGCAAAGTTGTCTTCTGGGGTGGTATTTACTTCCATTCCATAATAAAATTTTGAAAAGATTGCCTAACTATCTTCTTGTGTCCAGCTGATAAGTCTGGTGCAAGAAATATTTGGAAGATATTATCCACCTCTTCATGAAATGTCAGCTTACTACCCATCTCTCTTAGAGGCCGTTGGTTGCTTTTGGACACGTTTTTGCATTTCCTTCTAATTTCAGGCCTTACTTCATGTATTATTAGATGGATTATCTTTACTCAAAATTCGAAAGGGGTTTGTTTTGCAGCTTGATGCTGTTATGACCATTTTCTGAGAATGTTGGTTGGGAGGGGATTGAAGAGTATTTCAGAACAGTAAGAAAGGGTATCACATGAGGTTTGAGACATCATCGTTCTTCTTGCCTCTTAACGGAGTGGAAGTTCTAAGGAATTCTATGACTCTTCCCCTTCCTTTATTGCCTCTAATTCGATATCTTTTTATAACTTCTTTAGGACAGGGGTTTCCTTTCCTATATATTTCATTCTTTTGATGAAATTGTTTCTCGAAAAAATAAAATAAATACAGTCGTTGAACCAAACGATATTGAGACTGAATCACTACCAGCATGCAGCCAGAGATCTGTATAATCAGTTTGATAACTTATGAAAATCTAGGTGAATTACCCAAGAGAAAAGCAAAGAGTAAACCTTTTCATTGGAGACAAACTTTCATTGAAGAAAAGAAGGGAATACAGAAAAAAAAAAAGGCACAGGGAAGAAAGATCCCTCCTCCTTGGAGTAATAGGAAAAACTCCTCAAATCTACTTTAATCCAATAGCTGCTGTAATTACTAAATTTCTTATGTTTGGCATTCCAATTAGAAGCCATATGCTGTACAACTCATAAAAAATCTTAAAATTATCATCAAATATTCTATTGTTTCTTTCGAACCACACCCACAAGGACCAGATCAAGGCCCAAATAATACTTCACATTTTGAATCTGCTCCTTCCCACAATTGTCACTGGCGTTTTGGCTTGGCAAATTGTTCATAAAAATTCAAGTACAGCATGTTGCAGTGAATCCATAGTTCCTTCAGTGGCTGTCAATCTGTCATCCATTTGGGCACAAACCCTCCGAGGGATGGAGGCACTATTGCAGCTTGAGCATAGTCGCTGGGAGGAGTGCTGACCTCCCATCACAGCTTGATTTTTGCTTGCTGCCATGTTGGTCATAGAAGACATGCTTGAATTTGTGATACTAAATTTTGGTGGAGCTTCAATGAAATTGTTTCTGGCATAGACATTTTACCTTTCCAGGGATCTGGAATCCAAGGTTACAGTTTTCCTTATCACTGTGTCAAAGCTTGAGTATGATCCTCTAATTCAAGTTAGAAGGGAGCAGAGCCATTCATAGAGATTTGTATTCGTAGTAACAAGTTTATGGCTATTGTTTCAAGTGGTCTACTTTTTCCTTTTTTGGTTACAAGTCAAACTGGGATTTTTTATATTTAAATTTAAATTTTCTTTTACATACATGTCATCTATTATAAGCTGTAATAAGTGAATTGATCTTATGCAAAAATGACCACAGAACTTTCATATTCTGAAAAAATGCCAATCAGTTAATAACATCTATAGTAGACTTTTTTTGGAACGCCTAGGAGCTCACATCGATACATTACTTTGTTTAAACCCATTTTGATAGTTAGCATATGCAGAGAAGTTGTTTGCCCGCACTACCTGCTGTACTGCATTTTAACCTGTATAAGCTGTCATGTAGGAGTTGAAAAAGGATCAAAGGATCCAAAGGCAGAGAAAGTGGGAAAGATAACCATTGAACAGTTGCGTACGATTGCTGCTGAAAAGTTACCAGATTTGAATTGCACAACCATTGAATCTGCAATGAGAATCATTGCAGGTACGGCAGCCAATATGGGAATTGAGGTTGACCCTCCTGTCCTTGAACCTAAAAAGAAGGAACTTGTGTAGTCATTTGTGATAAATTGGTTTATTCTTTTACTTTTTTTTTTGTATGCTTTAATCTATTTGAGGTATCTTACTGTAAGAGGATTTACAAATTCACAATCAAGCTTCCTGTTCCTATA

mRNA sequence

TATCCCAAAAAAGTATTTTTCAAGTAACCTGGCAAAAACCCAACTTAAAAAACAGAACTTTTATTTCATTTTGCAGGGTTTATCCAAAAAATTTCTGAGAGCTCTCTGTGTTTGCTTATCTATGGCTTCTTCCCTCTCCACCTATCATCAACACCATCTTCTTTCTCCTTCATTTTCTTCAAAAATTACTACTAATGGCAAGCAGCTCTCCTCTCCATTTTTCACTTCACCCTCTTCAGGGTTGTCTTCAAAGTTCAATTTCTCGCTTCGGTTCCTCAGCAATGGCAAATCTTCGTCCCTCATCTCTCCCACTCCAAGGCGTCTCAGTGTCGTCTCAATGGCGCCCCCTAAAGCCAAGCCTGGTGGAAAAGCCAAGAAAGTAATTGGGATGATTAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTTGGCCCTGCTCTTGGTTCGAAGGGTGTTAATATCATGGCCTTTTGTAAGGATTACAATGCCAAGACAGCGGACAAGGCCGGCTATGTGATTCCAGTTGAAATTACTGTTTACGATGATAAAAGTTTTACTTTCGTGCTGAAGACTCCGCCTGCTTCTGTTCTTCTTCTCAAGGCTGCTGGAGTTGAAAAAGGATCAAAGGATCCAAAGGCAGAGAAAGTGGGAAAGATAACCATTGAACAGTTGCGTACGATTGCTGCTGAAAAGTTACCAGATTTGAATTGCACAACCATTGAATCTGCAATGAGAATCATTGCAGGTACGGCAGCCAATATGGGAATTGAGGTTGACCCTCCTGTCCTTGAACCTAAAAAGAAGGAACTTGTGTAGTCATTTGTGATAAATTGGTTTATTCTTTTACTTTTTTTTTTGTATGCTTTAATCTATTTGAGGTATCTTACTGTAAGAGGATTTACAAATTCACAATCAAGCTTCCTGTTCCTATA

Coding sequence (CDS)

ATGGCTTCTTCCCTCTCCACCTATCATCAACACCATCTTCTTTCTCCTTCATTTTCTTCAAAAATTACTACTAATGGCAAGCAGCTCTCCTCTCCATTTTTCACTTCACCCTCTTCAGGGTTGTCTTCAAAGTTCAATTTCTCGCTTCGGTTCCTCAGCAATGGCAAATCTTCGTCCCTCATCTCTCCCACTCCAAGGCGTCTCAGTGTCGTCTCAATGGCGCCCCCTAAAGCCAAGCCTGGTGGAAAAGCCAAGAAAGTAATTGGGATGATTAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTTGGCCCTGCTCTTGGTTCGAAGGGTGTTAATATCATGGCCTTTTGTAAGGATTACAATGCCAAGACAGCGGACAAGGCCGGCTATGTGATTCCAGTTGAAATTACTGTTTACGATGATAAAAGTTTTACTTTCGTGCTGAAGACTCCGCCTGCTTCTGTTCTTCTTCTCAAGGCTGCTGGAGTTGAAAAAGGATCAAAGGATCCAAAGGCAGAGAAAGTGGGAAAGATAACCATTGAACAGTTGCGTACGATTGCTGCTGAAAAGTTACCAGATTTGAATTGCACAACCATTGAATCTGCAATGAGAATCATTGCAGGTACGGCAGCCAATATGGGAATTGAGGTTGACCCTCCTGTCCTTGAACCTAAAAAGAAGGAACTTGTGTAG

Protein sequence

MASSLSTYHQHHLLSPSFSSKITTNGKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSSLISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

Homology

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BLAST of Lcy02g012280 vs. ExPASy Swiss-Prot
Match: Q9MAP3 (50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 4.8e-83
Identity = 173/233 (74.25%), Postives = 196/233 (84.12%), Query Frame = 0


Query: 2   ASSLSTYHQHHLLSPSFSSKITTNGKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSSLI 61
           +SSLST      L  S SS +  N K        S S+ LSSK N S++FL   K S L+
Sbjct: 3   SSSLST------LCSSTSSSLHPNSK-----LSHSLSAKLSSKANVSVQFLGK-KQSPLL 62

Query: 62  SPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFC 121
           S TPR L+V++MAPP  KPGGKAKKV+G+IKLALEAGKATPAPPVGPALGSKGVNIMAFC
Sbjct: 63  SSTPRFLTVIAMAPP--KPGGKAKKVVGVIKLALEAGKATPAPPVGPALGSKGVNIMAFC 122

Query: 122 KDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGK 181
           KDYNA+TADKAGY+IPVEITV+DDKSFTF+LKTPPASVLLLKAAGVEKGSKDP+ +KVG 
Sbjct: 123 KDYNARTADKAGYIIPVEITVFDDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGV 182

Query: 182 ITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           ITI+QLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGI++DPP+LEPKKK ++
Sbjct: 183 ITIDQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIDIDPPILEPKKKAVL 221

[Close]

BLAST of Lcy02g012280 vs. ExPASy Swiss-Prot
Match: P31164 (50S ribosomal protein L11, chloroplastic OS=Spinacia oleracea OX=3562 GN=rpl11 PE=1 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.6e-76
Identity = 160/220 (72.73%), Postives = 183/220 (83.18%), Query Frame = 0


Query: 15  SPSFSSKITTNGKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSSLISPTPRRLSVVSMA 74
           +PS SS  +   ++L S   T  S  LSS    SL+FL++    S  S + RRLS+V+MA
Sbjct: 8   APSSSSITSPIPRKLCSSLLTPSSLSLSSNPRNSLQFLNSKLFLSPPSTSHRRLSIVAMA 67

Query: 75  PPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGY 134
           P   KP GKAKKVIG+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADK G+
Sbjct: 68  P---KP-GKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKPGF 127

Query: 135 VIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAEK 194
           VIPVEITV+DDKSFTF+LKTPPASVLLLKA+G EKGSKDP+ EKVGKITI+QLR IA EK
Sbjct: 128 VIPVEITVFDDKSFTFILKTPPASVLLLKASGAEKGSKDPQMEKVGKITIDQLRGIATEK 187

Query: 195 LPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           LPDLNCTTIESAMRIIAGTAANMGI++DPP+L  KKKE++
Sbjct: 188 LPDLNCTTIESAMRIIAGTAANMGIDIDPPILVKKKKEVI 223

[Close]

BLAST of Lcy02g012280 vs. ExPASy Swiss-Prot
Match: O78412 (50S ribosomal protein L11, chloroplastic OS=Guillardia theta OX=55529 GN=rpl11 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.3e-51
Identity = 102/138 (73.91%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 84  AKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 143
           AKKV+ +IKLALEAGKATPAPPVGPALG +GVNI+ FCKDYNA+TADKAG +IPVEITVY
Sbjct: 2   AKKVVAIIKLALEAGKATPAPPVGPALGQRGVNIVMFCKDYNARTADKAGLIIPVEITVY 61

Query: 144 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAEKLPDLNCTTI 203
           +DKS+TFVLKTPPASVLL KAAGV+KGS +PK  +VG +T +Q+  IA  KLPDLN   +
Sbjct: 62  EDKSYTFVLKTPPASVLLAKAAGVQKGSGNPKKTQVGSVTKKQVEEIAQTKLPDLNTRRL 121

Query: 204 ESAMRIIAGTAANMGIEV 222
           ESA+RII GTA NMGI V
Sbjct: 122 ESAIRIIEGTAKNMGIGV 139

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BLAST of Lcy02g012280 vs. ExPASy Swiss-Prot
Match: B7JWT8 (50S ribosomal protein L11 OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=rplK PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.9e-50
Identity = 100/138 (72.46%), Postives = 116/138 (84.06%), Query Frame = 0


Query: 84  AKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 143
           AKKV+ MIKLAL AGKA PAPPVGPALG  GVNIMAFCK+YNAKTAD+AG VIPVEI+V+
Sbjct: 2   AKKVVAMIKLALPAGKANPAPPVGPALGQHGVNIMAFCKEYNAKTADQAGMVIPVEISVF 61

Query: 144 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAEKLPDLNCTTI 203
           +D+SFTFVLKTPPASVL+ KAAGVE+GS  P   KVG IT +QLR IA  K+PDLN   I
Sbjct: 62  EDRSFTFVLKTPPASVLIRKAAGVERGSNQPNKTKVGSITQDQLREIAQTKMPDLNANDI 121

Query: 204 ESAMRIIAGTAANMGIEV 222
           E+AM+I+AGTA NMG+ +
Sbjct: 122 EAAMKIVAGTARNMGVTI 139

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BLAST of Lcy02g012280 vs. ExPASy Swiss-Prot
Match: B8HVL5 (50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rplK PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 9.2e-50
Identity = 95/138 (68.84%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 84  AKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 143
           AKKV+ +IKLA+ AGKA PAPP+GPALG  GVNIM FCK+YNA+TAD+AG VIPVEI+VY
Sbjct: 2   AKKVVAIIKLAITAGKANPAPPIGPALGQHGVNIMMFCKEYNARTADQAGLVIPVEISVY 61

Query: 144 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAEKLPDLNCTTI 203
           +D+SFTF+LKTPPASVL+ KAAG+E+GS +P  +KVGKIT  QLR IA  KLPDLN   +
Sbjct: 62  EDRSFTFILKTPPASVLIQKAAGIERGSGEPNKKKVGKITTAQLREIAQTKLPDLNANDV 121

Query: 204 ESAMRIIAGTAANMGIEV 222
           ++AMRI+AGTA NMG+ +
Sbjct: 122 DAAMRIVAGTARNMGVTI 139

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BLAST of Lcy02g012280 vs. ExPASy TrEMBL
Match: A0A0A0KQJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146890 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.7e-113
Identity = 219/234 (93.59%), Postives = 226/234 (96.58%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSSL 60
           MASS+STYHQHHLLSPSFSSKI+ +  +LSSPF TS SSGLSSKFNFSLRFL+NG+SSSL
Sbjct: 46  MASSISTYHQHHLLSPSFSSKISASSNRLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 105

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 106 ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 165

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 166 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 225

Query: 181 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Sbjct: 226 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEIDPPVLEPKTKALV 279

[Close]

BLAST of Lcy02g012280 vs. ExPASy TrEMBL
Match: A0A5D3C6S0 (50S ribosomal protein L11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001370 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 5.2e-112
Identity = 218/234 (93.16%), Postives = 224/234 (95.73%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSSL 60
           MASSLSTYHQHHLLSPSFSSKI+ N   LSSPF TS SSGLSSKFNFSLRFL+NG+SSSL
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKISANSNHLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           IS TPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISHTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           K+TIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKQKAVV 234

[Close]

BLAST of Lcy02g012280 vs. ExPASy TrEMBL
Match: A0A1S3AU30 (50S ribosomal protein L11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482876 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 5.2e-112
Identity = 218/234 (93.16%), Postives = 224/234 (95.73%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSSL 60
           MASSLSTYHQHHLLSPSFSSKI+ N   LSSPF TS SSGLSSKFNFSLRFL+NG+SSSL
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKISANSNHLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           IS TPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISHTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           K+TIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKQKAVV 234

[Close]

BLAST of Lcy02g012280 vs. ExPASy TrEMBL
Match: A0A6J1DMT9 (50S ribosomal protein L11, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111022678 PE=3 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.5e-108
Identity = 215/235 (91.49%), Postives = 223/235 (94.89%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTN-GKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSS 60
           MASSLSTY QHHLLSP FSSK + N GKQLSSPF   P+SGLSS FNFSL+FLSNG+SSS
Sbjct: 1   MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSS 60

Query: 61  LISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120
           L+S  PRRLSV+SMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA
Sbjct: 61  LLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120

Query: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKV 180
           FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+AEKV
Sbjct: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKV 180

Query: 181 GKITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           GKITIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 GKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 234

[Close]

BLAST of Lcy02g012280 vs. ExPASy TrEMBL
Match: A0A6J1ET69 (50S ribosomal protein L11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435764 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.1e-105
Identity = 210/234 (89.74%), Postives = 217/234 (92.74%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSSL 60
           MASSLS YH        FSSK+T N K LSS F  SPSSGLSSKFNFSLRF S+G+SSSL
Sbjct: 1   MASSLSIYH-------PFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSL 60

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLSVVSMAPPKAKPGGKAKKVIG+IKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+A+KVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVG 180

Query: 181 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KITIEQLR IAAEKLPDLNCTTIESAMR+IAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227

[Close]

BLAST of Lcy02g012280 vs. NCBI nr
Match: XP_038876314.1 (50S ribosomal protein L11, chloroplastic [Benincasa hispida])

HSP 1 Score: 424.1 bits (1089), Expect = 7.9e-115
Identity = 223/234 (95.30%), Postives = 227/234 (97.01%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSSL 60
           MASSLSTYHQHHLLSPSFSSKIT N K LSSPF TS SSGLSSKFNFSLRFLSNG+SSSL
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKITANSKPLSSPFLTSSSSGLSSKFNFSLRFLSNGQSSSL 60

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLSVVSMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           K+TIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKK+LV
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKQLV 234

[Close]

BLAST of Lcy02g012280 vs. NCBI nr
Match: XP_004145879.2 (50S ribosomal protein L11, chloroplastic [Cucumis sativus])

HSP 1 Score: 417.2 bits (1071), Expect = 9.6e-113
Identity = 219/234 (93.59%), Postives = 226/234 (96.58%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSSL 60
           MASS+STYHQHHLLSPSFSSKI+ +  +LSSPF TS SSGLSSKFNFSLRFL+NG+SSSL
Sbjct: 1   MASSISTYHQHHLLSPSFSSKISASSNRLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Sbjct: 181 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEIDPPVLEPKTKALV 234

[Close]

BLAST of Lcy02g012280 vs. NCBI nr
Match: KAE8647824.1 (hypothetical protein Csa_000647 [Cucumis sativus])

HSP 1 Score: 417.2 bits (1071), Expect = 9.6e-113
Identity = 219/234 (93.59%), Postives = 226/234 (96.58%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSSL 60
           MASS+STYHQHHLLSPSFSSKI+ +  +LSSPF TS SSGLSSKFNFSLRFL+NG+SSSL
Sbjct: 87  MASSISTYHQHHLLSPSFSSKISASSNRLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 146

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 147 ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 206

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 207 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 266

Query: 181 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Sbjct: 267 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEIDPPVLEPKTKALV 320

[Close]

BLAST of Lcy02g012280 vs. NCBI nr
Match: XP_008437462.1 (PREDICTED: 50S ribosomal protein L11, chloroplastic [Cucumis melo] >KAA0042635.1 50S ribosomal protein L11 [Cucumis melo var. makuwa] >TYK06036.1 50S ribosomal protein L11 [Cucumis melo var. makuwa])

HSP 1 Score: 413.7 bits (1062), Expect = 1.1e-111
Identity = 218/234 (93.16%), Postives = 224/234 (95.73%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSSL 60
           MASSLSTYHQHHLLSPSFSSKI+ N   LSSPF TS SSGLSSKFNFSLRFL+NG+SSSL
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKISANSNHLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           IS TPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISHTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           K+TIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKQKAVV 234

[Close]

BLAST of Lcy02g012280 vs. NCBI nr
Match: XP_022155580.1 (50S ribosomal protein L11, chloroplastic [Momordica charantia])

HSP 1 Score: 401.0 bits (1029), Expect = 7.1e-108
Identity = 215/235 (91.49%), Postives = 223/235 (94.89%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTN-GKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSS 60
           MASSLSTY QHHLLSP FSSK + N GKQLSSPF   P+SGLSS FNFSL+FLSNG+SSS
Sbjct: 1   MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSS 60

Query: 61  LISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120
           L+S  PRRLSV+SMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA
Sbjct: 61  LLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120

Query: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKV 180
           FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+AEKV
Sbjct: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKV 180

Query: 181 GKITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           GKITIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 GKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 234

[Close]

BLAST of Lcy02g012280 vs. TAIR 10
Match: AT1G32990.1 (plastid ribosomal protein l11 )

HSP 1 Score: 308.9 bits (790), Expect = 3.4e-84
Identity = 173/233 (74.25%), Postives = 196/233 (84.12%), Query Frame = 0


Query: 2   ASSLSTYHQHHLLSPSFSSKITTNGKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSSLI 61
           +SSLST      L  S SS +  N K        S S+ LSSK N S++FL   K S L+
Sbjct: 3   SSSLST------LCSSTSSSLHPNSK-----LSHSLSAKLSSKANVSVQFLGK-KQSPLL 62

Query: 62  SPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFC 121
           S TPR L+V++MAPP  KPGGKAKKV+G+IKLALEAGKATPAPPVGPALGSKGVNIMAFC
Sbjct: 63  SSTPRFLTVIAMAPP--KPGGKAKKVVGVIKLALEAGKATPAPPVGPALGSKGVNIMAFC 122

Query: 122 KDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGK 181
           KDYNA+TADKAGY+IPVEITV+DDKSFTF+LKTPPASVLLLKAAGVEKGSKDP+ +KVG 
Sbjct: 123 KDYNARTADKAGYIIPVEITVFDDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGV 182

Query: 182 ITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           ITI+QLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGI++DPP+LEPKKK ++
Sbjct: 183 ITIDQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIDIDPPILEPKKKAVL 221

[Close]

BLAST of Lcy02g012280 vs. TAIR 10
Match: AT5G51610.1 (Ribosomal protein L11 family protein )

HSP 1 Score: 166.0 bits (419), Expect = 3.6e-41
Identity = 104/218 (47.71%), Postives = 132/218 (60.55%), Query Frame = 0


Query: 14  LSPSFSSKITTNGKQLSSPFFTSPSSGLSSKFNFSLRFLSNGKSSSLISPTPRRLSVVSM 73
           ++ S  S + +    L  P   S S+ L+SK N S +FL+N + S L+S TPR L+V++ 
Sbjct: 1   MASSSLSHLCSCTSSLHHPLSHSISANLTSKTNLSFQFLAN-RQSPLLSSTPRSLTVIAG 60

Query: 74  APPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAG 133
           A   +K  GK KKV+G++K+ + AGKAT APP                            
Sbjct: 61  ATAPSKLRGKTKKVVGIVKMNVWAGKATLAPP---------------------------- 120

Query: 134 YVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAE 193
                      D+SFTF+LKTPP S LLLKAAGV+KGSKDPK  KVG ITI+Q+R IA  
Sbjct: 121 -----------DQSFTFILKTPPTSFLLLKAAGVKKGSKDPKQIKVGMITIDQVRKIAEV 178

Query: 194 KLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKK 232
           KLP+LNCTTI S MR IAGTA NMGI++DPP+LEPK K
Sbjct: 181 KLPELNCTTIVSTMRTIAGTAGNMGIDIDPPILEPKNK 178

[Close]

BLAST of Lcy02g012280 vs. TAIR 10
Match: AT4G35490.1 (mitochondrial ribosomal protein L11 )

HSP 1 Score: 102.4 bits (254), Expect = 4.9e-22
Identity = 61/140 (43.57%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 85  KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTAD-KAGYVIPVEITVY 144
           + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+NA+T   K    + V IT +
Sbjct: 11  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70

Query: 145 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAEKLPDLNC--T 204
            D SF F +K+P  S  + KAAGV+KGS  P    V  +++  +  IA  K  D  C   
Sbjct: 71  KDNSFEFTVKSPTVSWYIKKAAGVDKGSTRPGHLSVTTLSVRHVYEIAKVKQTDPFCQYM 130

Query: 205 TIESAMRIIAGTAANMGIEV 222
            +ES  + I GTA +MGI++
Sbjct: 131 PLESICKSIIGTANSMGIKI 150

The following BLAST results are available for this feature:

BLAST of Lcy02g012280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAP3	4.8e-83	74.25	50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
P31164	2.6e-76	72.73	50S ribosomal protein L11, chloroplastic OS=Spinacia oleracea OX=3562 GN=rpl11 P...	[more]
O78412	8.3e-51	73.91	50S ribosomal protein L11, chloroplastic OS=Guillardia theta OX=55529 GN=rpl11 P...	[more]
B7JWT8	1.9e-50	72.46	50S ribosomal protein L11 OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=r...	[more]
B8HVL5	9.2e-50	68.84	50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=39...	[more]

BLAST of Lcy02g012280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQJ8	4.7e-113	93.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146890 PE=3 SV=1	[more]
A0A5D3C6S0	5.2e-112	93.16	50S ribosomal protein L11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3AU30	5.2e-112	93.16	50S ribosomal protein L11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482876...	[more]
A0A6J1DMT9	3.5e-108	91.49	50S ribosomal protein L11, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1ET69	2.1e-105	89.74	50S ribosomal protein L11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Lcy02g012280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876314.1	7.9e-115	95.30	50S ribosomal protein L11, chloroplastic [Benincasa hispida]	[more]
XP_004145879.2	9.6e-113	93.59	50S ribosomal protein L11, chloroplastic [Cucumis sativus]	[more]
KAE8647824.1	9.6e-113	93.59	hypothetical protein Csa_000647 [Cucumis sativus]	[more]
XP_008437462.1	1.1e-111	93.16	PREDICTED: 50S ribosomal protein L11, chloroplastic [Cucumis melo] >KAA0042635.1...	[more]
XP_022155580.1	7.1e-108	91.49	50S ribosomal protein L11, chloroplastic [Momordica charantia]	[more]

BLAST of Lcy02g012280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32990.1	3.4e-84	74.25	plastid ribosomal protein l11	[more]
AT5G51610.1	3.6e-41	47.71	Ribosomal protein L11 family protein	[more]
AT4G35490.1	4.9e-22	43.57	mitochondrial ribosomal protein L11	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000911	Ribosomal protein L11/L12	SMART	SM00649	rl11c	coord: 91..222 e-value: 6.3E-81 score: 284.8
IPR000911	Ribosomal protein L11/L12	PANTHER	PTHR11661	60S RIBOSOMAL PROTEIN L12	coord: 58..222
IPR000911	Ribosomal protein L11/L12	HAMAP	MF_00736	Ribosomal_L11	coord: 87..223 score: 29.623251
IPR000911	Ribosomal protein L11/L12	CDD	cd00349	Ribosomal_L11	coord: 91..221 e-value: 9.74854E-72 score: 213.081
IPR006519	Ribosomal protein L11, bacterial-type	TIGRFAM	TIGR01632	TIGR01632	coord: 85..222 e-value: 4.0E-63 score: 209.5
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	GENE3D	3.30.1550.10		coord: 84..153 e-value: 2.8E-36 score: 125.0
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	SUPERFAMILY	54747	Ribosomal L11/L12e N-terminal domain	coord: 81..166
IPR020784	Ribosomal protein L11, N-terminal	PFAM	PF03946	Ribosomal_L11_N	coord: 84..148 e-value: 1.2E-31 score: 108.3
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	GENE3D	1.10.10.250		coord: 154..234 e-value: 5.7E-38 score: 130.7
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	SUPERFAMILY	46906	Ribosomal protein L11, C-terminal domain	coord: 149..222
IPR020783	Ribosomal protein L11, C-terminal	PFAM	PF00298	Ribosomal_L11	coord: 153..221 e-value: 7.4E-25 score: 87.3
None	No IPR available	PANTHER	PTHR11661:SF10	RIBOSOMAL PROTEIN L11	coord: 58..222
IPR020785	Ribosomal protein L11, conserved site	PROSITE	PS00359	RIBOSOMAL_L11	coord: 208..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g012280.1	Lcy02g012280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome