Lcy02g012130 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g012130
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	E3 ubiquitin-protein ligase MARCH2-like isoform X1
Location	Chr02: 36816728 .. 36820388 (-)
RNA-Seq Expression	Lcy02g012130
Synteny	Lcy02g012130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTGGGTCTCTTTCGATGTGGGAGTGAGATTTGGCGCCTGAATTGCTAGAGCAATATCCTTGTGTTTGTTGAAAACCTACAAATAACGTGGATTCATATACTCTTCTCATAAATACGTAATTTATTTGTGTAAATAAATTGGGTTTTTTTTTTTGGCTGTTTGTTGTTCAGTTCATTCAGCGTCAAATCCATTTTTTCTCAATCAACCAGTATTCACGACGCAATTTCAGAACCATTTTTTTCTTTGCCTTCCAATCTCACCTAATAAAGAGAAAAGTTGGGTTGGAATTGAAATTTTCTCTTGTTCCTTTTTTCTCGTTTCAGCTCAATCTCTACTGCTTCAACAGTAGAATCTTCAATCCTTCAAATCTGAGTCTCCCCAGGTACGACCCCTTTTGATTCTATTCGATTTTATTCTCGATTTTGCTACTGTTGCTCTGTTTACTTCGTTTGTGATTTTGTTTACGATTGCTGCGTGTAATGAAATTGTTTCAGTGGGCTTTTGTGTGTCAGTCGGTTGTTTGGACTGATTGAAGTTTGGTTGGAGAAAATTTTGCTTCAATTTGGTTGGTGGGCTTGGATTTATGAAATTGGGTTTTGCGGATTGAGGCTCGTTCGTGATTTTCGCTTTTGTTTGGAGTGAATTTTTTTAAGTTCAATTGTGACATGTAATGCGAAGTTTCAATGTATTTTGTGTCTCACTTGTTTGTTTGGACTGAAAGAAATTGGTAGGTGGAAAATTGGCTTCAATTGGTTGGTGGGCTTGTTTCCCTCTTTCTTTTTGTTTTTCTTTTTTCTTCTTTAATGGTGTTGTGGGATGAAGACTGAGTTAAAGAAATTTTCTATTCTATTTAGGGGTGAGAGAAATTGGGGAAAGGGATGATGCTCAAAAATGTCAGCCAAGGATTTTTGTTCAATTGATTCAAGTTTTTGTAGTTTGAAATTTGAATGACCTTTCAATATGTCGGATTGCCATTCAAATGATGTAAAGGCCAACACCAGCTCCAACCACAACCTGAGCAATGAGGGCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATCAGCATCAGAGCCCTCTACCAGTGATGATGCTGTTGATCATACACCATTGACAATTGTTGTTTCTAGTGGGGAGCCCAAATCAATCTCTGAAGTTCCTGGGACTCCTCAAGGGGAATTATTGCCTTGTGCAGTTTCCCCCAAAAAGGAGCTCTTGTCTACTACAACTTCTAGTTCTGATGAGCAGTGCAGGTACACTTTAATTGCTGCTCTTCCCTGAAAAATGCTCTTCTAGTTGTTCTGTTCAATTTTGCTGGTCCATTTTGGCATCACTTTTAGTTAGTTCCTCGTCTCTTCCTCATACTGTTGTTATTTATGTTGTTTGTTCATTGCTTGTCAGCCATAAAACATTCGATACTCCTTGTCGAAAATTGATGCTTTCTATGGTTTGTTAAATCGCCACTAAATCCAAAAGGTTAACTGGGAATCAAATATGTGATCTATTAATTAATATAAACAGGAGAGGAAATGACTTTTCGGGAGAGTCTGAAATCATGTGGAACTACCACTAAATCTAATAGCAAGTTGATAGAACATATTTAAACTTTTTTTTATATAGTCTTAATAAGATTAAATTGCCACTATGAGCATAGCTCTATGGTTAAGGCATTTACTCCTCCTGTTGAGGTAAAAGGTTCAAGTCTCCACCTACATATCTGTTGAACTAAAGAAAAAAAAGATTAAAACCTTATTGTTGTTGCTTTGGCATCATGATGCTATTGGTTTGTCTTTTGGAAATCTTACCTATGTTGTCCGTTATAAATAAAAATTTTCATATACTGTTGTCTTTCCATGTAATCTCCATTATAGTGGATTATATCCACAATTACCATTGGCTTCATTTATCTGGTTAGTGTGTTGTAAAGGAAGTTGAGGCCATTAAGCCTGAATACTATTATTCAGAATTTGTCAGCAAGAAAAGGAAGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGTGGTCTGGCAAAAGCTCATCGGACTTGCATAGATACCTGGTTTCGTTCTAAAGGATCAAACAGATGTGAGATATGCCAGTAAGTTTGTCTTTTGAGGATGAAATTCATTGACTTAACATAATCATATTGTTTTGGGGGCATTTTGACATGTAATTTTGCTAACTTTTGCAGGGTTGTAGCGGCAAATGTATCAGCTCCACAATCACATCATGGTGTACGTATTCCGTAGCTTCTGATGCAATGATTTTAATTAGTTTTCAATTCCTAGCCTTTTCCATCTTCATAAAGCCTAATTGTAAAACTTATAAAATCAACGCCTCAATGGATATTGAATATCTTTATCCTGACTACAGTGTTAGTGTTATTAGTTGATGATCAACATCAGGGTTTTAGTTTTTCATTTGCTACATTTTCTTACTCTCTTTTCCCATATTAGGAAAATATCATCATGACATTTTCATTTGTAATCTTTGCTTCTGAGCGTTCCTTTTAACTTGAAAGGCTTTATGAAGTTGAATAGTGAATATTTGTGAATGAGTGTCCAGCATATTGAACTTGCTTTACTGGTTCACACTGAATTGAAATGAAAATACAATAAGTATTATAGGCGAGGACAACTGGTTCCTCTCCTCCCTGAATTTAGAAATGGCTCGTTAAAGTGGCAAGGAGTCACTCGCTCTCTAAACTATATACAAACAAAACCAAACTCCTGAACTAATTACTTGGCTTGAAAATTATCAAGGTTCTGTTTTCATTGAAAGATGAGTTTTCTTTTGCTTTGTTCAAACTATTGATTCATGAGAATTGCAGCGTACAACTATTTATTTAGCATTGAACTTATGATCTTGATGGATATCGTATTGAAGTAACCTCAACTTCGATTGTTCCTTATATTTGACAAGCACAGACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACCCCAGATCCTGAAAGGGTAAGAGGTTCACTTTTCCAATGATATACTTGTTTCATGAGTAGTCAAAAACATCAACCTTCTTCATGACTTTTTGCAGCAGCACTGCTTCAGTCCACTGTGGCTGGCTTTTGCCATCCTCATAGGGGGTCTGCTTCTGGACATTCTTATATCCATCACCCTTGGCGTTTCGGCATTGCCTGTAAATATCATCATCGGTACGTTCATACTTTTTGTCGATCGAGCTATCTAGTTTCATTCATGTTGTGCTTTTTACGGTTATTGAAACCTTGAAGAACAGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCCCTGGAGTTCTTACAGGAATGGAATTCAACAAGAGGATCGCAAAGGGTGGAATCAAATGTCACTATCGGGTACTTTCCAGCTATATAGTCTTTGACAGTTTGTTTAAGTAAAAAACGATACATAAATAAAGTGAAAATATATCTTATTCTTGTCTTTTCCAATATGTATTAGCATCTTGATCAAACATATTAATTTAGGATATTTGTTCCAATGGTAAATTTGACAATAAACTAGTAAATAAGTTTAGTGAGATTTTGCAAGTGACAAGTAATAAAATATTATGTTTTGACACGACTTTATATTAGTCAAAGTCTTGTACTTATTGTTTGGAATGTCTTTCATTCCGAATAGGT

mRNA sequence

TTGTGGGTCTCTTTCGATGTGGGAGTGAGATTTGGCGCCTGAATTGCTAGAGCAATATCCTTGTGTTTGTTGAAAACCTACAAATAACGTGGATTCATATACTCTTCTCATAAATACGTAATTTATTTGTGTAAATAAATTGGGTTTTTTTTTTTGGCTGTTTGTTGTTCAGTTCATTCAGCGTCAAATCCATTTTTTCTCAATCAACCAGTATTCACGACGCAATTTCAGAACCATTTTTTTCTTTGCCTTCCAATCTCACCTAATAAAGAGAAAAGTTGGGTTGGAATTGAAATTTTCTCTTGTTCCTTTTTTCTCGTTTCAGCTCAATCTCTACTGCTTCAACAGTAGAATCTTCAATCCTTCAAATCTGAGTCTCCCCAGGGGTGAGAGAAATTGGGGAAAGGGATGATGCTCAAAAATGTCAGCCAAGGATTTTTGTTCAATTGATTCAAGTTTTTGTAGTTTGAAATTTGAATGACCTTTCAATATGTCGGATTGCCATTCAAATGATGTAAAGGCCAACACCAGCTCCAACCACAACCTGAGCAATGAGGGCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATCAGCATCAGAGCCCTCTACCAGTGATGATGCTGTTGATCATACACCATTGACAATTGTTGTTTCTAGTGGGGAGCCCAAATCAATCTCTGAAGTTCCTGGGACTCCTCAAGGGGAATTATTGCCTTGTGCAGTTTCCCCCAAAAAGGAGCTCTTGTCTACTACAACTTCTAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAAAAGGAAGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGTGGTCTGGCAAAAGCTCATCGGACTTGCATAGATACCTGGTTTCGTTCTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCGGCAAATGTATCAGCTCCACAATCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACCCCAGATCCTGAAAGGCAGCACTGCTTCAGTCCACTGTGGCTGGCTTTTGCCATCCTCATAGGGGGTCTGCTTCTGGACATTCTTATATCCATCACCCTTGGCGTTTCGGCATTGCCTGTAAATATCATCATCGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCCCTGGAGTTCTTACAGGAATGGAATTCAACAAGAGGATCGCAAAGGGTGGAATCAAATGTCACTATCGGGTACTTTCCAGCTATATAGTCTTTGACAGTTTGTTTAAGTAAAAAACGATACATAAATAAAGTGAAAATATATCTTATTCTTGTCTTTTCCAATATGTATTAGCATCTTGATCAAACATATTAATTTAGGATATTTGTTCCAATGGTAAATTTGACAATAAACTAGTAAATAAGTTTAGTGAGATTTTGCAAGTGACAAGTAATAAAATATTATGTTTTGACACGACTTTATATTAGTCAAAGTCTTGTACTTATTGTTTGGAATGTCTTTCATTCCGAATAGGT

Coding sequence (CDS)

ATGTCGGATTGCCATTCAAATGATGTAAAGGCCAACACCAGCTCCAACCACAACCTGAGCAATGAGGGCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATCAGCATCAGAGCCCTCTACCAGTGATGATGCTGTTGATCATACACCATTGACAATTGTTGTTTCTAGTGGGGAGCCCAAATCAATCTCTGAAGTTCCTGGGACTCCTCAAGGGGAATTATTGCCTTGTGCAGTTTCCCCCAAAAAGGAGCTCTTGTCTACTACAACTTCTAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAAAAGGAAGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGTGGTCTGGCAAAAGCTCATCGGACTTGCATAGATACCTGGTTTCGTTCTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCGGCAAATGTATCAGCTCCACAATCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACCCCAGATCCTGAAAGGCAGCACTGCTTCAGTCCACTGTGGCTGGCTTTTGCCATCCTCATAGGGGGTCTGCTTCTGGACATTCTTATATCCATCACCCTTGGCGTTTCGGCATTGCCTGTAAATATCATCATCGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCCCTGGAGTTCTTACAGGAATGGAATTCAACAAGAGGATCGCAAAGGGTGGAATCAAATGTCACTATCGGGTACTTTCCAGCTATATAG

Protein sequence

MSDCHSNDVKANTSSNHNLSNEGDLEKQRVAQPSASEPSTSDDAVDHTPLTIVVSSGEPKSISEVPGTPQGELLPCAVSPKKELLSTTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRTCIDTWFRSKGSNRCEICQVVAANVSAPQSHHGTNYWIWRIDPTYRTPDPERQHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFLQEWNSTRGSQRVESNVTIGYFPAI

Homology

[Close]

BLAST of Lcy02g012130 vs. ExPASy TrEMBL
Match: A0A6J1K2D4 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491089 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.2e-114
Identity = 221/257 (85.99%), Postives = 231/257 (89.88%), Query Frame = 0


Query: 1   MSDCHSNDVKANTSSNHNLSNEGDLEKQRVAQPSASEPSTSDDAVDHTPLTIVVSSGEPK 60
           MSDCH NDVK NTS+  N  NE DLEKQRV  PSA++PSTS D  DHTPLTIVVS+GE K
Sbjct: 1   MSDCHLNDVKGNTSAEKN--NEADLEKQRVELPSAADPSTS-DVDDHTPLTIVVSNGELK 60

Query: 61  SISEVPGTPQGELLPCAVSPKKELLSTTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120
           S+SEV   P+ +LLPCAVSP KELLS TTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK
Sbjct: 61  SVSEV---PREKLLPCAVSPMKELLS-TTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120

Query: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSAPQSHHGTNYWIWRIDPTYRTPDPERQHCFS 180
           AHRTCIDTWFRSKGSNRCEICQVVAANVS PQSHH TNYWIWRIDPTYRT +PERQ  FS
Sbjct: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERQRYFS 180

Query: 181 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFLQEWNSTR 240
           PLWLAFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEF QEWNSTR
Sbjct: 181 PLWLAFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEWNSTR 240

Query: 241 GSQRVESNVTIGYFPAI 258
           GSQRVESNVTIGYFPAI
Sbjct: 241 GSQRVESNVTIGYFPAI 250

[Close]

BLAST of Lcy02g012130 vs. ExPASy TrEMBL
Match: A0A6J1K8G6 (E3 ubiquitin-protein ligase MARCH2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491089 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 3.0e-113
Identity = 220/257 (85.60%), Postives = 232/257 (90.27%), Query Frame = 0


Query: 1   MSDCHSNDVKANTSSNHNLSNEGDLEKQRVAQPSASEPSTSDDAVDHTPLTIVVSSGEPK 60
           MSDCH NDVK NTS+  N  NE DLEKQRV  PSA++PSTS D  DHTPLTIVVS+GE K
Sbjct: 1   MSDCHLNDVKGNTSAEKN--NEADLEKQRVELPSAADPSTS-DVDDHTPLTIVVSNGELK 60

Query: 61  SISEVPGTPQGELLPCAVSPKKELLSTTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120
           S+SEV   P+ +LLPCAVSP KELLS TTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK
Sbjct: 61  SVSEV---PREKLLPCAVSPMKELLS-TTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120

Query: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSAPQSHHGTNYWIWRIDPTYRTPDPERQHCFS 180
           AHRTCIDTWFRSKGSNRCEICQVVAANVS PQSHH TNYWIWRIDPTYRT +PER++ FS
Sbjct: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERRY-FS 180

Query: 181 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFLQEWNSTR 240
           PLWLAFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEF QEWNSTR
Sbjct: 181 PLWLAFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEWNSTR 240

Query: 241 GSQRVESNVTIGYFPAI 258
           GSQRVESNVTIGYFPAI
Sbjct: 241 GSQRVESNVTIGYFPAI 249

[Close]

BLAST of Lcy02g012130 vs. ExPASy TrEMBL
Match: A0A6J1H2W4 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459604 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.5e-112
Identity = 217/257 (84.44%), Postives = 229/257 (89.11%), Query Frame = 0


Query: 1   MSDCHSNDVKANTSSNHNLSNEGDLEKQRVAQPSASEPSTSDDAVDHTPLTIVVSSGEPK 60
           M DCH ND+K NTS++ N  N  DLEKQRV  PSA++PSTS D  DHTPLTIVVS+GE K
Sbjct: 1   MLDCHLNDLKGNTSADKN--NGADLEKQRVELPSAADPSTS-DVDDHTPLTIVVSNGELK 60

Query: 61  SISEVPGTPQGELLPCAVSPKKELLSTTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120
           SISEV   P+ ELLPCAVSP KELLS TTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK
Sbjct: 61  SISEV---PREELLPCAVSPMKELLS-TTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120

Query: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSAPQSHHGTNYWIWRIDPTYRTPDPERQHCFS 180
           AHRTCIDTWFRSKGSNRCEICQVVAANVS PQSHH TNYWIWRIDPTYRT +PERQ  FS
Sbjct: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERQSYFS 180

Query: 181 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFLQEWNSTR 240
           P+WLAFAILIGGLLLDIL+SITLG+SALPVN+IIGVIVVLGLGTV RLALEF  EWNSTR
Sbjct: 181 PIWLAFAILIGGLLLDILVSITLGISALPVNLIIGVIVVLGLGTVLRLALEFFHEWNSTR 240

Query: 241 GSQRVESNVTIGYFPAI 258
           GSQRVESNVTIGYFPAI
Sbjct: 241 GSQRVESNVTIGYFPAI 250

[Close]

BLAST of Lcy02g012130 vs. ExPASy TrEMBL
Match: A0A5A7TM25 (E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001330 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 7.4e-112
Identity = 216/260 (83.08%), Postives = 228/260 (87.69%), Query Frame = 0


Query: 3   DCHSNDVKANTSSNHNLSNEGDLEKQRVAQPSASEPSTSDDAVDHTPLTIVVSSGEPKSI 62
           DCHSNDVKAN  +  N SNEGDLEKQRVAQPS+S   ++ D  D+TPLTIVVS+GE K  
Sbjct: 6   DCHSNDVKAN--AGRNQSNEGDLEKQRVAQPSSSLELSTRDGDDNTPLTIVVSTGESKPT 65

Query: 63  SEVPG-----TPQGELLPCAVSPKKELLSTTTSSSDEQCRICQQEKEEVLIELGCHCRGG 122
           SEVPG     + +   L CAVSPKKE  S+T SSSDEQCRICQQEKEEVLIELGCHCRGG
Sbjct: 66  SEVPGPGTLCSQEEGSLACAVSPKKE-FSSTASSSDEQCRICQQEKEEVLIELGCHCRGG 125

Query: 123 LAKAHRTCIDTWFRSKGSNRCEICQVVAANVSAPQSHHGTNYWIWRIDPTYRTPDPERQH 182
           LAKAHRTCIDTWFR+ GSNRCEICQVVAANVS PQSHHGTNYWIWRIDPTYRT DP+RQ+
Sbjct: 126 LAKAHRTCIDTWFRTIGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQY 185

Query: 183 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFLQEWN 242
           CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEF QEWN
Sbjct: 186 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN 245

Query: 243 STRGSQRVESNVTIGYFPAI 258
           S RGSQRVESNVTIGYFPAI
Sbjct: 246 SARGSQRVESNVTIGYFPAI 262

[Close]

BLAST of Lcy02g012130 vs. ExPASy TrEMBL
Match: A0A1S3AU77 (E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 9.7e-112
Identity = 216/260 (83.08%), Postives = 228/260 (87.69%), Query Frame = 0


Query: 3   DCHSNDVKANTSSNHNLSNEGDLEKQRVAQPSASEPSTSDDAVDHTPLTIVVSSGEPKSI 62
           DCHSNDVKAN  +  N SNEGDLEKQRVAQPS+S   ++ D  D+TPLTIVVS+GE K  
Sbjct: 6   DCHSNDVKAN--AGRNQSNEGDLEKQRVAQPSSSLELSTRDGDDNTPLTIVVSTGESKPT 65

Query: 63  SEVPG-----TPQGELLPCAVSPKKELLSTTTSSSDEQCRICQQEKEEVLIELGCHCRGG 122
           SEVPG     + +   L CAVSPKKE  S+T SSSDEQCRICQQEKEEVLIELGCHCRGG
Sbjct: 66  SEVPGPGTLCSQEEGSLACAVSPKKE-FSSTASSSDEQCRICQQEKEEVLIELGCHCRGG 125

Query: 123 LAKAHRTCIDTWFRSKGSNRCEICQVVAANVSAPQSHHGTNYWIWRIDPTYRTPDPERQH 182
           LAKAHRTCIDTWFR+KGSNRCEICQVVAANVS PQSHHGTNYWIWRIDPTYRT DP+RQ+
Sbjct: 126 LAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQY 185

Query: 183 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFLQEWN 242
           CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEF QEWN
Sbjct: 186 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN 245

Query: 243 STRGSQRVESNVTIGYFPAI 258
           S R SQRVESNVTIGYFPAI
Sbjct: 246 SARVSQRVESNVTIGYFPAI 262

[Close]

BLAST of Lcy02g012130 vs. NCBI nr
Match: XP_038875308.1 (E3 ubiquitin-protein ligase MARCHF2 isoform X3 [Benincasa hispida])

HSP 1 Score: 427.6 bits (1098), Expect = 7.8e-116
Identity = 226/262 (86.26%), Postives = 234/262 (89.31%), Query Frame = 0


Query: 1   MSDCHSNDVKANTSSNHNLSNEGDLEKQRVAQPSASEPSTSD-DAVDHTPLTIVVSSGEP 60
           MSDCHSNDVKANT +N N  N+GDLEKQRVAQPS+S    S  D  D+T LTIVVS+GE 
Sbjct: 1   MSDCHSNDVKANTGANQN--NDGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGES 60

Query: 61  KSISEVPGT----PQGELLPCAVSPKKELLSTTTSSSDEQCRICQQEKEEVLIELGCHCR 120
           K ISEVPG      Q  LLPC VSPKKELLS TTSSSDEQCRICQQEKEEVLIELGC+CR
Sbjct: 61  KPISEVPGVGTLCSQEGLLPCEVSPKKELLS-TTSSSDEQCRICQQEKEEVLIELGCNCR 120

Query: 121 GGLAKAHRTCIDTWFRSKGSNRCEICQVVAANVSAPQSHHGTNYWIWRIDPTYRTPDPER 180
           GGLAKAHRTCIDTWFR+KGSNRCEICQVVAANVS PQSHHGTNYWIWRIDPTYRT DP+R
Sbjct: 121 GGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQR 180

Query: 181 QHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFLQE 240
           QHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEF QE
Sbjct: 181 QHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSTRGSQRVESNVTIGYFPAI 258
           WNSTRGSQRVESNVTIGYFPAI
Sbjct: 241 WNSTRGSQRVESNVTIGYFPAI 259

[Close]

BLAST of Lcy02g012130 vs. NCBI nr
Match: XP_022995601.1 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 422.5 bits (1085), Expect = 2.5e-114
Identity = 221/257 (85.99%), Postives = 231/257 (89.88%), Query Frame = 0


Query: 1   MSDCHSNDVKANTSSNHNLSNEGDLEKQRVAQPSASEPSTSDDAVDHTPLTIVVSSGEPK 60
           MSDCH NDVK NTS+  N  NE DLEKQRV  PSA++PSTS D  DHTPLTIVVS+GE K
Sbjct: 1   MSDCHLNDVKGNTSAEKN--NEADLEKQRVELPSAADPSTS-DVDDHTPLTIVVSNGELK 60

Query: 61  SISEVPGTPQGELLPCAVSPKKELLSTTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120
           S+SEV   P+ +LLPCAVSP KELLS TTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK
Sbjct: 61  SVSEV---PREKLLPCAVSPMKELLS-TTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120

Query: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSAPQSHHGTNYWIWRIDPTYRTPDPERQHCFS 180
           AHRTCIDTWFRSKGSNRCEICQVVAANVS PQSHH TNYWIWRIDPTYRT +PERQ  FS
Sbjct: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERQRYFS 180

Query: 181 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFLQEWNSTR 240
           PLWLAFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEF QEWNSTR
Sbjct: 181 PLWLAFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEWNSTR 240

Query: 241 GSQRVESNVTIGYFPAI 258
           GSQRVESNVTIGYFPAI
Sbjct: 241 GSQRVESNVTIGYFPAI 250

[Close]

BLAST of Lcy02g012130 vs. NCBI nr
Match: XP_023534486.1 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421.8 bits (1083), Expect = 4.3e-114
Identity = 220/257 (85.60%), Postives = 232/257 (90.27%), Query Frame = 0


Query: 1   MSDCHSNDVKANTSSNHNLSNEGDLEKQRVAQPSASEPSTSDDAVDHTPLTIVVSSGEPK 60
           MSDCH NDVK NTS++ N  NE DLEKQRV  PSA++PSTS D  DHTPLTIVVS+GE K
Sbjct: 1   MSDCHLNDVKGNTSADKN--NEADLEKQRVELPSAADPSTS-DVDDHTPLTIVVSNGELK 60

Query: 61  SISEVPGTPQGELLPCAVSPKKELLSTTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120
           SISEV   P+ ELLPCAVSP KELLS TTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK
Sbjct: 61  SISEV---PREELLPCAVSPMKELLS-TTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120

Query: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSAPQSHHGTNYWIWRIDPTYRTPDPERQHCFS 180
           AHRTCIDTWFRSKGSNRCEICQVVAANVS PQSHH TNYWIWRIDPTYRT +PERQ  FS
Sbjct: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERQRYFS 180

Query: 181 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFLQEWNSTR 240
           P+WLAFAILIGGLLLDIL+SITLG+SALPVN+IIGVIVVLGLGTV RLALEF QEWNSTR
Sbjct: 181 PIWLAFAILIGGLLLDILVSITLGISALPVNLIIGVIVVLGLGTVLRLALEFFQEWNSTR 240

Query: 241 GSQRVESNVTIGYFPAI 258
           GS+RVESNVTIGYFPAI
Sbjct: 241 GSRRVESNVTIGYFPAI 250

[Close]

BLAST of Lcy02g012130 vs. NCBI nr
Match: XP_038875309.1 (E3 ubiquitin-protein ligase MARCHF2 isoform X4 [Benincasa hispida])

HSP 1 Score: 420.6 bits (1080), Expect = 9.6e-114
Identity = 225/262 (85.88%), Postives = 233/262 (88.93%), Query Frame = 0


Query: 1   MSDCHSNDVKANTSSNHNLSNEGDLEKQRVAQPSASEPSTSD-DAVDHTPLTIVVSSGEP 60
           MSDCHSNDVKANT +N N  N+GDLEKQRVAQPS+S    S  D  D+T LTIVVS+GE 
Sbjct: 1   MSDCHSNDVKANTGANQN--NDGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGES 60

Query: 61  KSISEVPGT----PQGELLPCAVSPKKELLSTTTSSSDEQCRICQQEKEEVLIELGCHCR 120
           K ISEVPG      Q  LLPC VSPKKELLS TTSSSDEQCRICQQEKEEVLIELGC+CR
Sbjct: 61  KPISEVPGVGTLCSQEGLLPCEVSPKKELLS-TTSSSDEQCRICQQEKEEVLIELGCNCR 120

Query: 121 GGLAKAHRTCIDTWFRSKGSNRCEICQVVAANVSAPQSHHGTNYWIWRIDPTYRTPDPER 180
           GGLAKAHRTCIDTWFR+KGSNRCEICQVVAANVS PQSHHGTNYWIWRIDPTYRT DP+R
Sbjct: 121 GGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQR 180

Query: 181 QHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFLQE 240
            HCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEF QE
Sbjct: 181 -HCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSTRGSQRVESNVTIGYFPAI 258
           WNSTRGSQRVESNVTIGYFPAI
Sbjct: 241 WNSTRGSQRVESNVTIGYFPAI 258

[Close]

BLAST of Lcy02g012130 vs. NCBI nr
Match: XP_022995603.1 (E3 ubiquitin-protein ligase MARCH2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 417.9 bits (1073), Expect = 6.2e-113
Identity = 220/257 (85.60%), Postives = 232/257 (90.27%), Query Frame = 0


Query: 1   MSDCHSNDVKANTSSNHNLSNEGDLEKQRVAQPSASEPSTSDDAVDHTPLTIVVSSGEPK 60
           MSDCH NDVK NTS+  N  NE DLEKQRV  PSA++PSTS D  DHTPLTIVVS+GE K
Sbjct: 1   MSDCHLNDVKGNTSAEKN--NEADLEKQRVELPSAADPSTS-DVDDHTPLTIVVSNGELK 60

Query: 61  SISEVPGTPQGELLPCAVSPKKELLSTTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120
           S+SEV   P+ +LLPCAVSP KELLS TTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK
Sbjct: 61  SVSEV---PREKLLPCAVSPMKELLS-TTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120

Query: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSAPQSHHGTNYWIWRIDPTYRTPDPERQHCFS 180
           AHRTCIDTWFRSKGSNRCEICQVVAANVS PQSHH TNYWIWRIDPTYRT +PER++ FS
Sbjct: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERRY-FS 180

Query: 181 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFLQEWNSTR 240
           PLWLAFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEF QEWNSTR
Sbjct: 181 PLWLAFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEWNSTR 240

Query: 241 GSQRVESNVTIGYFPAI 258
           GSQRVESNVTIGYFPAI
Sbjct: 241 GSQRVESNVTIGYFPAI 249

[Close]

BLAST of Lcy02g012130 vs. TAIR 10
Match: AT2G45530.1 (RING/U-box superfamily protein )

HSP 1 Score: 255.0 bits (650), Expect = 6.5e-68
Identity = 143/245 (58.37%), Postives = 171/245 (69.80%), Query Frame = 0


Query: 20  SNEGDLEKQRVAQPSASEP-STSDDAVDHTPLTIVVSSGEPKSISEVPGTPQGELLPCAV 79
           S   DLEKQ+  Q     P   S+ A +   LTIVV +G+  S  E+ G          +
Sbjct: 7   SGGDDLEKQQQQQQKDKSPQKQSESANESNHLTIVVCNGD-SSREELVG---------QI 66

Query: 80  SPKKELLSTTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRTCIDTWFRSKGSNRC 139
            P+KE+  +   SS EQCR+C Q+KEEVLIELGC CRGGLAKAHR+CID WFR+KGSN+C
Sbjct: 67  PPEKEVSLSRNGSSHEQCRVCLQDKEEVLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQC 126

Query: 140 EICQVVAANVSAPQSHHGTNYWIWRIDPTYRTPDPERQHCFSPLWLAFAILIGGLLLDIL 199
           EICQVVA NV+ P++   TNYW+WRIDP+YR  + ER  CFSPLW+AF+ILIGGL+LD+L
Sbjct: 127 EICQVVAVNVTPPETQPTTNYWVWRIDPSYRQEERER-GCFSPLWVAFSILIGGLMLDVL 186

Query: 200 ISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFLQEWNST----RGSQRVESN--VTIG 258
           ISITLGVSALPVNIIIGVIVVLGLGT  RL LEF  EW+      R  QR E+N    I 
Sbjct: 187 ISITLGVSALPVNIIIGVIVVLGLGTALRLTLEFCYEWSLRRAVHRAVQRAEANNFSNIA 240

[Close]

BLAST of Lcy02g012130 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-11
Identity = 33/72 (45.83%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 89  TSSSDEQCRICQQEKEEV---LIELGCHCRGGLAKAHRTCIDTWFRSKGSNRCEICQVVA 148
           T+  ++ CRIC    E      IELGC C+  LA AHR C +TWF+ KG   CEICQ VA
Sbjct: 77  TAPPEKDCRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVA 136

Query: 149 ANVSAPQSHHGT 158
            NV       G+
Sbjct: 137 RNVGGANEMVGS 148

[Close]

BLAST of Lcy02g012130 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 9.5e-11
Identity = 29/65 (44.62%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 90  SSSDEQCRICQQE------KEEVLIELGCHCRGGLAKAHRTCIDTWFRSKGSNRCEICQV 149
           S S+  CRIC         +  V IELGC C+  LA AH+ C +TWF+ KG+  CE+C  
Sbjct: 73  SQSERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGS 132

[Close]

BLAST of Lcy02g012130 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 93  DEQCRICQQEKEE-----VLIELGCHCRGGLAKAHRTCIDTWFRSKGSNRCEICQVVAAN 152
           DE+    ++E+EE     + ++LGC C+G L  AH  C +TWF+ KG+  CEIC  +A N
Sbjct: 110 DEEDEEEEEEEEEEEYYGLPLQLGCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALN 169

Query: 153 VSAPQSH 155
           V+  QS+
Sbjct: 170 VAGEQSN 176

[Close]

BLAST of Lcy02g012130 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.6e-08
Identity = 26/63 (41.27%), Postives = 34/63 (53.97%), Query Frame = 0


Query: 91  SSDEQCRICQQEKEEVLIE------LGCHCRGGLAKAHRTCIDTWFRSKGSNRCEICQVV 148
           S ++ CRIC    E    E      LGC C+  L   H+ C DTWF+ KG+  CEIC+ +
Sbjct: 73  SPEKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSI 132

The following BLAST results are available for this feature:

BLAST of Lcy02g012130 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy02g012130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K2D4	1.2e-114	85.99	E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1K8G6	3.0e-113	85.60	E3 ubiquitin-protein ligase MARCH2-like isoform X2 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1H2W4	2.5e-112	84.44	E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A5A7TM25	7.4e-112	83.08	E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3AU77	9.7e-112	83.08	E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Lcy02g012130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875308.1	7.8e-116	86.26	E3 ubiquitin-protein ligase MARCHF2 isoform X3 [Benincasa hispida]	[more]
XP_022995601.1	2.5e-114	85.99	E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita maxima]	[more]
XP_023534486.1	4.3e-114	85.60	E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038875309.1	9.6e-114	85.88	E3 ubiquitin-protein ligase MARCHF2 isoform X4 [Benincasa hispida]	[more]
XP_022995603.1	6.2e-113	85.60	E3 ubiquitin-protein ligase MARCH2-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Lcy02g012130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45530.1	6.5e-68	58.37	RING/U-box superfamily protein	[more]
AT2G37950.1	1.5e-11	45.83	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G05830.1	9.5e-11	44.62	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	1.4e-09	41.79	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	2.6e-08	41.27	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 95..142 e-value: 1.4E-14 score: 64.5
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 96..141 e-value: 9.5E-11 score: 41.7
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 88..148 score: 19.423166
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 82..152 e-value: 9.5E-15 score: 55.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 15..256
None	No IPR available	PANTHER	PTHR46214:SF16	E3 UBIQUITIN-PROTEIN LIGASE MARCH11 ISOFORM X1	coord: 15..256
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 96..142 e-value: 2.59548E-13 score: 60.804
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 91..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g012130.1	Lcy02g012130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding