Lcy02g011950 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g011950
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Tumor necrosis factor receptor family protein
Location	Chr02: 36231439 .. 36239327 (+)
RNA-Seq Expression	Lcy02g011950
Synteny	Lcy02g011950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGTGGGTAATTCTGCTCACTCGTTGTCGACTCTCTTCGAATCTCAGTGTCTTGGCGGCAGCGGCATACCAGTGCGACGGCAGGCGAACAGTGCTAGAATTCTGTGCCACAAAATAGTGCGGTAGATTAGATATGTGGCTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTTGCGAGATATTTCTCGAGGACGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACGCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCACGGTCCTCTCAGCGTTTCTAATGCTTGGATTAAAGCCCAGGTAGGTTTTCCCCTCACTTTCTCTTACAAATCATCGTTTATGGTGGTTATCGAAACTGCATCGCACTGAAACTGAATTGATATTTACACAGTACCAGAGCGAGAGAGAGAGAGTTCAACGCGGACTATGTAAAAGCATTTGAAACTAATATACAGTCTCTATAAGCCCCCTTAGCATTAACCAGATACTCCCTACCCCCTCAAGCGAAATTGTTCTGGAATAACTAGAAGTTCGTACTTGAGATTGACGGCAATGAATCATCAGTTGCCTTGGTTAGAATATCAGCCGTTTGATCTTGAGTTGGAATAAATCGAACTTCTTGCTCTTTACTATCTCAATATTGTTGGTGCTAGCATGGTGAGGGGATTAGCAACAATTGAGTTAGCGTTAATATATTCATGCCAACTTATTTGGATGTTTCACAATCATGACATTCAATCAAGAGTTGCTTGATCTAGGTCAGCTCTGCAGCCACATTAGCTAAAGCCTGGTATGTAGTCTCAGAACTTGATCAAGATACCACATTTTCTTGGACTCTCTTCTTAGCCAAGGTGAAGGGCGAAGCGGGTACCTCCTGATTTGAATCTAACTCATATCCATACTTTGCTGCTAATGCTTTGGTAATTCCAACAGATTTTTAAGAGCAGAGAATGTCCAAAAGAGACCACTATATTAAGCATGACTGTAACATAAGCACCAAAATTTGAGTGATAGGACAGAAAATCTTTCATCAAGCAACGAGCCGGATCTGAATGTGGATATGCTTTTAAGGAAGACCAATTAGCCTTTTTTATATATATTTTTGGATAAAGAACCGAACTTTCATTGAGAAAAAATGAAAGAATACAAAAACATCCAAAAAAATCAAGCCCCCAAAAAAGGAACCCAACTTTTTTTTTTTGAATACAGAACTGAACTTTCATTGAGAAAAAATGAAAGAAAACAAGGGCATTCAAAAGACCAAGCCCCAAGCAAAAGGAACCCGACTAAAGAAAGGGTTTCCAGTCAATCAAAATAAGACCTAACGGGTAATTACAAAAAACCTTGGAAATTGAGGCCCATAAGGAAACACAAAACCGAATGTTAGCCCAAACCTCATACAGGAGTCTCTCAGCCCCTCTAAAAATTCTATTATTCCTCTCTTAAGAAGCACAGACACTTTAGTTTGGCTAGCGTGTCCGTGTCTGACACGTATCGGACACTTGGACACTCTGACACTTGTTAGACATGTATCGGACACTTGTTAACACAATTGATACGTGACAAATACATAGTTGTAAAAAGTCAATATAGGTCCATATTGAACACTTGTTAAGTATACTAAAAAGACATAATACTAAATGACAAAAATAATAAATTTTAAGAGTGAAATACATCAAACTCATTATTTTAAGTATACAAATGCTTAAACTTATTGATTTTGAATTTCCTTCTTGCATAAAAATGATATATATTTTTAAAAATGTATATTTTACTAAACGTGTCCATGTTGTGTCCGTGTCCTAGATTTTTAAAAAATGACGTGTCATCGTGTCCGTGTCGTGTTGTGTTTGTGTCTCGTGTCCGTATCCGTGCTTCTTAAATCCTCTCCCCCCAAATACCCCAAAGAATAGCACAAACACCAGCAAGCCCCAAATCTTCCTTTCTACCGAAACAGTGGATGGAGGAGGAACTCCTCGATCATCTCCCTGCTCCTACGCTGGCCAATAGTCTGAAACTCGAAAACCTCAAAGAAGAAGCTCCAGACAGAGCGAGCAAAACAACAATCCCACAACAAATGATCAAGATCTTCCTCTGCCTTCCGATAGAGGATGCAACAAAAAGGGCCAACCACCCGGGGCACACTCTCAAAAGCTTCTCAAAAGTATTAACTCGACCCAGGATGACTTGCCAAATGAAGAACAAAACTTTCTTTGGAGCTTTTACCTTCCATAGACACGGAAAAACAAACTCTCTAATCGGGGAGGGATTCAACAAAGATTGAAAGAACGAACGACAAGAAAAGCCCCTAGAGGGGTTGGGAGTCCATAAGCGGCCATCCCTCCTATCTGGTCTTAGACTAACCCCCTCTAGCAGCGATAATAGGGTAGAATGTCTATGGTTTCTCTATCAGATAAAGGACGAAGAAAGCCAAAGGAAAACGAGGGGGAGCTTCTCACAGAGCCAAGGATGTTAACCATAGTGCGATTTTTCATAGAAGATAAAAGATATAAGCGCGAGAACATAGAGCAGAGGGAACGATCCCCCACCCTAATGTCCTCCCAGAAGTAAATGTCTCTCCCATCACCCACCATGCACTGGACTAAGAAAGAAAAGGACGGGAGCTCCAGAGAGATGTCTTTCCAAGAATTTCTGAAGGTGCCTTTGATCCCACTCGATAGCCACATGAAAGGATGTTTCCCGTGTTTACTCACGATATTTCTAACCCAGAAAGAATCGGATTCAAGGCGAAATCGCCAAAGCCATTTAGCAAGCAAGGCTCTGTTACGAATTTTCAAGTTTCCCAACTCTAGACCCCTTAGACTCACAGGTTTTCCTATTGTCTCCCAACTCACTAAGTGTGCTCCTTTCCCTTCTCCAACCCCCTTCCCATAAACAATCTCTCATGAGCTTTTCCAGGATATTACAAATCGAAATAGGGGCTCTGAAAAGAGAGAAGAAGTAGATAGGCATGTTCCTAAGAACTGAGTGTATTAGAGTTTCCAATCAAACAAAATAAAGGAAGTGAGTCCATTTTTTTGCGAGTGTGGAAGGTTAAAGTCCCGAAGAAGATTAGGTTTTTTATGTGGCAAGTTATCCATGGCAGGGTTAATACCTACGATCGTCTGTTGAAAAGGATGCCCTCTTTGGTTGGTCCGTTTTGCTGTATTCTGTGTCGGAAGGCGGAGGAAGATCTGGATCATATTCTGTGGAGTTGTGCCTTTGCGCGTGCTGCGTGGGATCGGTTTGGTCAGGTTTTTGGGTTGCAAGGGTTATCTTTTGCTGACCACAGGGAGATGATTGAGGAGTTCCTCCTCCATCTGCCATTTCGGAAGAGAGCGAGATTTTTGTGGCTCGGGGGGATGTGTGCTTTATTGTGGAATCTTTGGGGTGAGAGGAACAATAGAGTGTTTAGGGGGAGTGAGAGGGATCCTGAGGATGTCTGGTCCCTCACTCGTTATCATGTCTCTCTTTGGGCTTCGGTCTCTAAGATGTTTTGTAATTATCCGTTAAGTTGTATTTTGCTTGATTGGGGTCCCTTTCTCTAGTTGGACTCCTTTTTGTGGGCTTGTTTTTTGTATGCCCGTGTATTCTTTCATTTTTTCTCAATGAAAGTTGGTTTTTCATAAAAAAAAAATCAAAATAAAGGAAGTTTCTTCTCGAAAGGAGGTAAAAGGAACCCAACTAAAGGAAGGGTTTCCAATCGATCAAAATAAGACCTAGCGGGTAATTACAAAAAGCCCTGGCAACCGAGGCCCATAAAGAAACACGAAACCTAATATTAGCCCAAACTTCACAAGAATGTCTCTTAATCCCTCTGAAAATTCTATTGTTTCTTTCCCCCTATAAACCCCACAAAATAGCACAAATGCCAGCATGCCAAAGGAACCTTACTTTCTCTCGAAACGGCGGATGGAGGAGGAACTCCTCGATCATCTCCCTGCAACGACGCTGACCAACAATCTGAAACTCAAAAACCTCAAAGAATAGGCTCTAGACTGAGCGAGCAAACTCACAACCCCACAACAAAGGATCAAGATCTTCCTTCGCCTTCCGACATAGAATGCAACAGAAAGGGCCAACCACGGGGCCTTCACTCTCGAAAGCCTTCATTTGTTCATAGTCCCCTTCAAAAATTGAAGAATGCTTTCCAAGCCGTCTGGCTGGAACCTCCAAATTGCTTCATTCAAAACAACATTAAGAAATGAATTGCTAGAATCAAGCTACCCAATTTGTTAATCATTTTTCAAAGCAATACTACTTATTAATCAGGAAAATCAAAGGTTTTTGAATAATTTTGACAAAACTCTTTTGCAACCAAACAAGCGTTACACCTTTGAACACTTACTGCAACATGTAATTTTATATTGAACGCCCATTTGTTGCTGTTTCCTAGAGATTCTCAGGAGGAGCAGTGGCGAGTGAAGTAGGTTAGAATGAGTAGCCCATTGTGACCAACCATCTTGGATTAGCTCCATAAAAATAGGGATCTCCGGCATCTTCAGTCTCACATATGTCACTGGTACAAGTGTCCTCGTTGTTCTCTATTGGCACCCCTCTACTCACACCACCTTCCTTTACTTTCTCGTAAGGTATCATTCCCATTGGTACTTTTCTGTAAACCTCCTTGGTCTTCTCTACTATGATAGATACTTCCTATGTTCCAAATTAGCTCTAGTTTCTTAATCATCTTTGAGAACATGTTAAACTCTTCCCTGATATGAACAAGTTCCATATCAATGGTACCCTATACTCCTATGATCATCTCTTCCATGACATCTAGATCTATTCTCGTTTTCATTTTCTTTTATAAGCATTTCCTAGAATCACACTACTCTAATACCACTTTTGTTAGAAGTCATTTTATATTAAAAAGTTATTGAGAAGTAGGAATGTCGAGAATCTCCCTCACTCTCCCAAGTCCCAACCCTTAGCTAACACCGAAAAGGGTTCTTCCCTCCTTGCATCTGCTATCCCAAATGGACATTAAATGAACTCTTTTCTGCCAAGTTAATTAGTTAAAGATGACCCCACACCTACATCGTGCATCCTACTTGCTAGTTTCCCTTAATTCTCTTTCTGTGGTATGAACATATAATAGAGGCCTATCAAAACCTTTCAAAGTGTGGAAATATTCACTTGAATCAAATTGAAGACTTTTCAATAACCTACCAATGGATTCTCTACTAGAGCTTTTGAACTCCTTGAATATGGTGAAAGCTTTAGACTTGACTGTGAGGGGATAGGCCCAGTCGTCCAGGTAAATTAGCAAATTCATCAAGCAAATGAACGAAATACTTATAGCCTTCCTTGAAAGGGATATGCGTAGTCCTCAAATATCGGCATGCACTATTTCAAGAGAGGATATGTGGTCCATGAGTGAGCGGGAGACAAAGTAGTTTTGCAATGCAGTAAAAGCTTCAGACTTGACTGTGAGGGGATATGTCTAGGTAAATGTAGCAAAGTCATCAAGGAAATAAATGAAATACTTCCCTAATGGTCAATAAGGGCCATAGAAAAAATAAAGGGCTTAGAGGGAATGGGTTCAATCCATGGTGGCCACCTACCTAGGATATTTAATATCCTACGAGTTTCCTTGGCAACCAAATGTAGTAGGGTCACGCGGTTGTCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCGGACACTCACGGATATCAAAAAAAAAAAAAAAAGAAATAAATGAAATACTTATAGGCTAGCCTTCCTCAGGAGAGAGGGAGATAAGCGTTGGTCCCCAAATATGAGTATGATCTATTTCAAGAGGATAAGTGGACGAGTGAGACAGAGGTGAGGTAAGTGCATGGCACTTCCCTTTTTGTCAGGCATTACATAAGACAGTATCTCCTTTAATTGAACAATCAAGAGACAGGGTCAAGGCTTTCTTAACTATTCTGAAAGTCGTGTCCCAGTTGTAAGTGCCACGAATCAAAATCACTAACAACGTTTGTAGCTGAAACTAAAACTGGATATTTATTCGAAGACAAATCAACAACTAGTATCGACAGTAGAAGTGTTGTAGTAAACCCTTGGTATCATTAAAAGTTTTGAATTCTTATCCAGCCTCAAGTTAATTTCCAAAAATTAGGAATTTTGGGGATTAACATAGACAGACAATAAATAGTGATGCAAGCTAAACAGAATTGGTTGTGCTGCTCTTGATGGACTGCTCTCCTATTTAGGTACGCCTCTTGGGGATAATCCTCTCAATCATTCATTTTGGACCCAGTGCGAGTTGATAGAAGAAGATCTTTTCTAAAATTTGGCTCTTGGCTTTTTTATTTTTTATTTTTTATTTTTTTATTATTTTAATGGACATGCCTCCATTGTTGATTGTATAATGAAATCAGTCTAATTTTTGTTGCTATGTTTTTTTTTTTTTTAAAATGGCAACTAGGCTTGTCTTCTGCTGCTGTTGTTTTGTTTTGTTTTGTTTTTGTTTTTTTTTTTTTTCTTTTCCTTTTTAATTTAATGTGGGGTTGGGTTTGAACCTACGACCTCTTAGAGGAAGTAAATCAAAATGACATGACATCTAAGTCTTTTCTGTTGCATTATTTGAATACAGAAATTATAACAAATTATACAATTTAATGCTGTCCTCATATAAATGGCAACTACTTTATTTTTTAAAACAAATATAGCACCCAATGGTTATTGAATCCTGTTCAATATTTGATTATCGAGGGAAATCATACCGTTTGAATAGATTATTGAAAAGCATATAGAATAAACTATTGGATAATGTTTTAACAAATTTTTAATCCTTTTCAATAAAATGCCGATCATAATTGATAATACAGAGTTGCTTCTTTGGTTAATCAAGTATGGCAGTTACACTTTTTTGTACGTTAAGAAGTACATAATCAAACTGATGTCTTCCTTAACTATTTGACATGTTCTTATTAATAATATAGTCAACAAATGAATTCTGTTTAACTATGATGAAAAAAAGATTATTAAGTATAAACTTACAATTATTGGAATTATCTAGTGACTTTTACTATTTTTGTAAATTATGAACATAGTTGCTGTATATAGAAAGCTCCAATAGAATTTTTCATTTTTGAAATTGGATCATCTGAACATATCTTATAGAACCCAATGATGACTTAATCTATCTTATCTAGGACTTGACAAGTCCCTGTTATAGAAATGTATATTTGTAAGAGAAATTGTGCACGGCTCATCAGCCCTCATAAAAACCAGTGGGTTGGCTGAAATTTTATGCCCTTTCTATCTAATGCTGCTTTTCATATCAGGAATCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAACTATTGCTGAAATGGATGAGAGGAAGGAAGATGCTGAAGCTTTTCTGCACCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTCTACTCCCGATGATCCTCAGGCAGATCAGTTGAAGAATTCTTCAGAATTAGGAGTCCAGAGACAGAAGAGACAGAAGCCACCAAGGAGAAGAAAGCCATCAAAATAGACCTTTGCTGACGTCTGTTAGATTACCATGCAGTGGCAGCGGGCTATACTCCGGTTCTGTTTATTTGTACTGATGCGGGCTCATGACGTATGATGAATTTGTGAGTTTCTGCCATCACTGTTTTTGCCCAAATTTCAACTCTTTTTGGTGATATGCAAGGTCTTTCGAATATTTCACATTGACTTGTTCCCATGCATTGACTGATAAACATGCATTGAATTCGTGGTTGATAAAGCATGGATTAGGATGTCTCATTGGATCAAGGAAAAAGAGGCGAGATCTTGAGAAATATATTAAACTCTTGCTGTGAC

mRNA sequence

TGTGTGGGTAATTCTGCTCACTCGTTGTCGACTCTCTTCGAATCTCAGTGTCTTGGCGGCAGCGGCATACCAGTGCGACGGCAGGCGAACAGTGCTAGAATTCTGTGCCACAAAATAGTGCGGTAGATTAGATATGTGGCTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTTGCGAGATATTTCTCGAGGACGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACGCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCACGGTCCTCTCAGCGTTTCTAATGCTTGGATTAAAGCCCAGGAATCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAACTATTGCTGAAATGGATGAGAGGAAGGAAGATGCTGAAGCTTTTCTGCACCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTCTACTCCCGATGATCCTCAGGCAGATCAGTTGAAGAATTCTTCAGAATTAGGAGTCCAGAGACAGAAGAGACAGAAGCCACCAAGGAGAAGAAAGCCATCAAAATAGACCTTTGCTGACGTCTGTTAGATTACCATGCAGTGGCAGCGGGCTATACTCCGGTTCTGTTTATTTGTACTGATGCGGGCTCATGACGTATGATGAATTTGTGAGTTTCTGCCATCACTGTTTTTGCCCAAATTTCAACTCTTTTTGGTGATATGCAAGGTCTTTCGAATATTTCACATTGACTTGTTCCCATGCATTGACTGATAAACATGCATTGAATTCGTGGTTGATAAAGCATGGATTAGGATGTCTCATTGGATCAAGGAAAAAGAGGCGAGATCTTGAGAAATATATTAAACTCTTGCTGTGAC

Coding sequence (CDS)

ATGTGGCTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTTGCGAGATATTTCTCGAGGACGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACGCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCACGGTCCTCTCAGCGTTTCTAATGCTTGGATTAAAGCCCAGGAATCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAACTATTGCTGAAATGGATGAGAGGAAGGAAGATGCTGAAGCTTTTCTGCACCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTCTACTCCCGATGATCCTCAGGCAGATCAGTTGAAGAATTCTTCAGAATTAGGAGTCCAGAGACAGAAGAGACAGAAGCCACCAAGGAGAAGAAAGCCATCAAAATAG

Protein sequence

MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQKPPRRRKPSK

Homology

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BLAST of Lcy02g011950 vs. ExPASy TrEMBL
Match: A0A6J1E538 (uncharacterized protein LOC111026127 OS=Momordica charantia OX=3673 GN=LOC111026127 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.1e-69
Identity = 141/155 (90.97%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWLR  QRIG+ADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST 120
           VKQHGPLS+SNAWIKAQE GVSGLNSKTHMKL+LKWMRGRKMLKL C QVGSNKKFLLST
Sbjct: 61  VKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRKMLKLLCNQVGSNKKFLLST 120

Query: 121 -PDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK 154
            PDDPQADQLK+SSELGVQR+KR KPP RRRKPSK
Sbjct: 121 LPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK 155

[Close]

BLAST of Lcy02g011950 vs. ExPASy TrEMBL
Match: A0A0A0KK52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.6e-64
Identity = 130/154 (84.42%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 1   MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGV 60
           MW RSIQRIGNADGGGG AGLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST 120
           V+QHGPL++SNAWIKAQESGV+GLNSKTHMKLLLKWMRGRKML LFC  VGSNKKFLL T
Sbjct: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120

Query: 121 PDDPQADQLKNSSELGVQRQKRQK-PPRRRKPSK 154
           PDDP+A++LKNSSE G QR+KR K P +RRK SK
Sbjct: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of Lcy02g011950 vs. ExPASy TrEMBL
Match: A0A6J1H3U5 (uncharacterized protein LOC111459852 OS=Cucurbita moschata OX=3662 GN=LOC111459852 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.7e-63
Identity = 130/153 (84.97%), Postives = 141/153 (92.16%), Query Frame = 0


Query: 2   WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVV 61
           WLR IQ I NADGGGGSAGLVFSTF RYFSR+RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 3   WLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62

Query: 62  KQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTP 121
           KQHGPL+VSNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML+LFC QVGSNKKFLL+TP
Sbjct: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122

Query: 122 DDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK 154
           DDP+A++LK++SE  VQR+K+QK   RRRK SK
Sbjct: 123 DDPRAEELKSASEPVVQRRKKQKAQIRRRKASK 155

[Close]

BLAST of Lcy02g011950 vs. ExPASy TrEMBL
Match: A0A6J1K817 (uncharacterized protein LOC111491495 OS=Cucurbita maxima OX=3661 GN=LOC111491495 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.5e-63
Identity = 129/153 (84.31%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 2   WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVV 61
           WLR IQ I NADGGGGSAGLVFSTFARYFSR+RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62

Query: 62  KQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTP 121
           KQHGPL+VSNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML+LFC QVGSNKKFLL+TP
Sbjct: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122

Query: 122 DDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK 154
           +DP+A++LK++SE  VQR+K+QK   RR+K SK
Sbjct: 123 NDPRAEELKSASEPVVQRRKKQKARIRRKKASK 155

[Close]

BLAST of Lcy02g011950 vs. ExPASy TrEMBL
Match: A0A1S3ATS9 (uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.2e-62
Identity = 126/154 (81.82%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGV 60
           MW RSIQRIGN DGGGG  GLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNTDGGGGLPGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST 120
           ++QHGPL+VSNAWIKAQESGV+GLNSKTHMKLLLKWMRGR+ML LFC  VGSNKKFLL T
Sbjct: 61  IQQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRRMLNLFCHYVGSNKKFLLCT 120

Query: 121 PDDPQADQLKNSSELGVQRQKRQK-PPRRRKPSK 154
           PDDP+A++LKN SE G QR+KR K P +RRK SK
Sbjct: 121 PDDPRAEELKNYSESGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of Lcy02g011950 vs. NCBI nr
Match: XP_022159821.1 (uncharacterized protein LOC111026127 [Momordica charantia])

HSP 1 Score: 271.6 bits (693), Expect = 4.3e-69
Identity = 141/155 (90.97%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWLR  QRIG+ADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST 120
           VKQHGPLS+SNAWIKAQE GVSGLNSKTHMKL+LKWMRGRKMLKL C QVGSNKKFLLST
Sbjct: 61  VKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRKMLKLLCNQVGSNKKFLLST 120

Query: 121 -PDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK 154
            PDDPQADQLK+SSELGVQR+KR KPP RRRKPSK
Sbjct: 121 LPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK 155

[Close]

BLAST of Lcy02g011950 vs. NCBI nr
Match: XP_038876162.1 (uncharacterized protein LOC120068455 [Benincasa hispida])

HSP 1 Score: 267.7 bits (683), Expect = 6.2e-68
Identity = 138/154 (89.61%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWLRSIQRIGNADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST 120
           VKQHGPL+VSNAWIKAQESGV+GLNSKTHMKLLLKWMRGRKML LFC QVGSNKKFLL T
Sbjct: 61  VKQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCNQVGSNKKFLLCT 120

Query: 121 PDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK 154
           PDDP+A+QLK+SSE GVQR+KR K P +RRK SK
Sbjct: 121 PDDPRAEQLKSSSESGVQRKKRAKSPVKRRKASK 154

[Close]

BLAST of Lcy02g011950 vs. NCBI nr
Match: XP_004145885.1 (uncharacterized protein LOC101211684 [Cucumis sativus] >KGN49953.1 hypothetical protein Csa_000114 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 5.4e-64
Identity = 130/154 (84.42%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 1   MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGV 60
           MW RSIQRIGNADGGGG AGLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST 120
           V+QHGPL++SNAWIKAQESGV+GLNSKTHMKLLLKWMRGRKML LFC  VGSNKKFLL T
Sbjct: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120

Query: 121 PDDPQADQLKNSSELGVQRQKRQK-PPRRRKPSK 154
           PDDP+A++LKNSSE G QR+KR K P +RRK SK
Sbjct: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of Lcy02g011950 vs. NCBI nr
Match: XP_022958708.1 (uncharacterized protein LOC111459852 [Cucurbita moschata])

HSP 1 Score: 251.9 bits (642), Expect = 3.5e-63
Identity = 130/153 (84.97%), Postives = 141/153 (92.16%), Query Frame = 0


Query: 2   WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVV 61
           WLR IQ I NADGGGGSAGLVFSTF RYFSR+RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 3   WLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62

Query: 62  KQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTP 121
           KQHGPL+VSNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML+LFC QVGSNKKFLL+TP
Sbjct: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122

Query: 122 DDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK 154
           DDP+A++LK++SE  VQR+K+QK   RRRK SK
Sbjct: 123 DDPRAEELKSASEPVVQRRKKQKAQIRRRKASK 155

[Close]

BLAST of Lcy02g011950 vs. NCBI nr
Match: KAG7035535.1 (hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 250.0 bits (637), Expect = 1.3e-62
Identity = 129/153 (84.31%), Postives = 141/153 (92.16%), Query Frame = 0


Query: 2   WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVV 61
           WLR IQ I NADGGGGSAGLVFSTFARYFSR+RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62

Query: 62  KQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTP 121
           KQHGPL+VSNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML+LFC QVGSNKKFLL+TP
Sbjct: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122

Query: 122 DDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK 154
           +DP+ ++LK++SE  VQR+K+QK   RRRK SK
Sbjct: 123 NDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 155

[Close]

BLAST of Lcy02g011950 vs. TAIR 10
Match: AT1G73940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-32
Identity = 78/146 (53.42%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 12  ADGGGG-----SAGLVF-------STFARYFSRTRAENLRKINPKLTPQEASLVAQDLYG 71
           A GGGG      A  +F       S   RY SR RA N+RKINPK+  QEA  ++  LY 
Sbjct: 4   AGGGGGLRKLCRASAIFDNEISYNSLLVRYMSRERAVNVRKINPKVPIQEAYAISNSLYD 63

Query: 72  VVKQHGPLSVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLS 131
           + K HGPLSV N W++AQE+GVSGLNSKTHMKLLLKWMRG+KMLKL C QVGS+KKF  +
Sbjct: 64  LFKLHGPLSVPNTWLRAQEAGVSGLNSKTHMKLLLKWMRGKKMLKLICNQVGSSKKFFHT 123

Query: 132 T-PDDPQADQLKNSSELGVQRQKRQK 145
             P+DP  +Q     E   Q  K+++
Sbjct: 124 VLPEDPLQEQPAAPIENKKQAVKKKR 149

[Close]

BLAST of Lcy02g011950 vs. TAIR 10
Match: AT5G49410.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 5.3e-17
Identity = 35/99 (35.35%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 22  VFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGV 81
           V     R+F+      ++ I     P++   + + ++ ++K HGPL+++  W + +E G+
Sbjct: 16  VVGMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGL 75

Query: 82  SGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST 121
            GL SK HMK++L+WMR R+ LKL C  VG +K+FL +T
Sbjct: 76  RGLTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTT 114

[Close]

BLAST of Lcy02g011950 vs. TAIR 10
Match: AT5G49410.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 5.3e-17
Identity = 35/99 (35.35%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 22  VFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQESGV 81
           V     R+F+      ++ I     P++   + + ++ ++K HGPL+++  W + +E G+
Sbjct: 16  VVGMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGL 75

Query: 82  SGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST 121
            GL SK HMK++L+WMR R+ LKL C  VG +K+FL +T
Sbjct: 76  RGLTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTT 114

The following BLAST results are available for this feature:

BLAST of Lcy02g011950 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy02g011950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E538	2.1e-69	90.97	uncharacterized protein LOC111026127 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]
A0A0A0KK52	2.6e-64	84.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1	[more]
A0A6J1H3U5	1.7e-63	84.97	uncharacterized protein LOC111459852 OS=Cucurbita moschata OX=3662 GN=LOC1114598...	[more]
A0A6J1K817	6.5e-63	84.31	uncharacterized protein LOC111491495 OS=Cucurbita maxima OX=3661 GN=LOC111491495...	[more]
A0A1S3ATS9	4.2e-62	81.82	uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=...	[more]

BLAST of Lcy02g011950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159821.1	4.3e-69	90.97	uncharacterized protein LOC111026127 [Momordica charantia]	[more]
XP_038876162.1	6.2e-68	89.61	uncharacterized protein LOC120068455 [Benincasa hispida]	[more]
XP_004145885.1	5.4e-64	84.42	uncharacterized protein LOC101211684 [Cucumis sativus] >KGN49953.1 hypothetical ...	[more]
XP_022958708.1	3.5e-63	84.97	uncharacterized protein LOC111459852 [Cucurbita moschata]	[more]
KAG7035535.1	1.3e-62	84.31	hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lcy02g011950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73940.1	2.0e-32	53.42	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G49410.1	5.3e-17	35.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G49410.2	5.3e-17	35.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..153
None	No IPR available	PANTHER	PTHR35110:SF1	EXPRESSED PROTEIN	coord: 2..146
None	No IPR available	PANTHER	PTHR35110	EXPRESSED PROTEIN	coord: 2..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g011950.1	Lcy02g011950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0008270	zinc ion binding