Lcy02g011870 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g011870
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RNase H domain-containing protein
Location	Chr02: 35789120 .. 35789761 (-)
RNA-Seq Expression	Lcy02g011870
Synteny	Lcy02g011870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTTACGAAATTCAATATTATGGGGAGGGAGTATGATGATCGAAACTTGATGCAGTGGGCGTCGGATTACTTACAATCGTTCCAGAATGCGGCGGTGAGGTGTTTTCAGTCGGTGGTTTTGCAGCAGGCGCAATCGATGAGGGTTGTGGTGTCGTGGGTTCCGCCAGCTGAGAATGAACTAAAACTGAATATTGATGAGTCAGTAAGGCCTGAATCTGGGGCGGCGAGTGGTGGTGCTGTCCTGCGTAATCATAGAGGGGAAGTCCTATTGATGGCTTGTGAAATTCTGCCCAAGTGTTGGAATGTTGACTTGGCCGAGGGATGGGCAATGTTGAGAGGTATACAAATTGCTCGACAAATGGGCTTTTCCAGTTTCCATGTTGAGACCGACTCGCTGAGATTATCAAGAGTTTTGACTGATGATGTGGATGATATTTCGGAAGTAGGAGCAATTATGGAAGAGATTCGTGGCTTGCTCCGGCAAGACTCTTCTTGTAGGGTGTTGTTCACACCCAGGCAAGGCAACTTGGTAGCTCATACCATGGCTTCTTTAGCTTTCCTGTATGCTAACTTTATTTGGCTTGAGGATTGGCCCATCGAGGCTACTGATGTACTTGTTCGTGATTTATCCTCCTAA

mRNA sequence

ATGGAACTTACGAAATTCAATATTATGGGGAGGGAGTATGATGATCGAAACTTGATGCAGTGGGCGTCGGATTACTTACAATCGTTCCAGAATGCGGCGGTGAGGTGTTTTCAGTCGGTGGTTTTGCAGCAGGCGCAATCGATGAGGGTTGTGGTGTCGTGGGTTCCGCCAGCTGAGAATGAACTAAAACTGAATATTGATGAGTCAGTAAGGCCTGAATCTGGGGCGGCGAGTGGTGGTGCTGTCCTGCGTAATCATAGAGGGGAAGTCCTATTGATGGCTTGTGAAATTCTGCCCAAGTGTTGGAATGTTGACTTGGCCGAGGGATGGGCAATGTTGAGAGGTATACAAATTGCTCGACAAATGGGCTTTTCCAGTTTCCATGTTGAGACCGACTCGCTGAGATTATCAAGAGTTTTGACTGATGATGTGGATGATATTTCGGAAGTAGGAGCAATTATGGAAGAGATTCGTGGCTTGCTCCGGCAAGACTCTTCTTGTAGGGTGTTGTTCACACCCAGGCAAGGCAACTTGGTAGCTCATACCATGGCTTCTTTAGCTTTCCTGTATGCTAACTTTATTTGGCTTGAGGATTGGCCCATCGAGGCTACTGATGTACTTGTTCGTGATTTATCCTCCTAA

Coding sequence (CDS)

ATGGAACTTACGAAATTCAATATTATGGGGAGGGAGTATGATGATCGAAACTTGATGCAGTGGGCGTCGGATTACTTACAATCGTTCCAGAATGCGGCGGTGAGGTGTTTTCAGTCGGTGGTTTTGCAGCAGGCGCAATCGATGAGGGTTGTGGTGTCGTGGGTTCCGCCAGCTGAGAATGAACTAAAACTGAATATTGATGAGTCAGTAAGGCCTGAATCTGGGGCGGCGAGTGGTGGTGCTGTCCTGCGTAATCATAGAGGGGAAGTCCTATTGATGGCTTGTGAAATTCTGCCCAAGTGTTGGAATGTTGACTTGGCCGAGGGATGGGCAATGTTGAGAGGTATACAAATTGCTCGACAAATGGGCTTTTCCAGTTTCCATGTTGAGACCGACTCGCTGAGATTATCAAGAGTTTTGACTGATGATGTGGATGATATTTCGGAAGTAGGAGCAATTATGGAAGAGATTCGTGGCTTGCTCCGGCAAGACTCTTCTTGTAGGGTGTTGTTCACACCCAGGCAAGGCAACTTGGTAGCTCATACCATGGCTTCTTTAGCTTTCCTGTATGCTAACTTTATTTGGCTTGAGGATTGGCCCATCGAGGCTACTGATGTACTTGTTCGTGATTTATCCTCCTAA

Protein sequence

MELTKFNIMGREYDDRNLMQWASDYLQSFQNAAVRCFQSVVLQQAQSMRVVVSWVPPAENELKLNIDESVRPESGAASGGAVLRNHRGEVLLMACEILPKCWNVDLAEGWAMLRGIQIARQMGFSSFHVETDSLRLSRVLTDDVDDISEVGAIMEEIRGLLRQDSSCRVLFTPRQGNLVAHTMASLAFLYANFIWLEDWPIEATDVLVRDLSS

Homology

[Close]

BLAST of Lcy02g011870 vs. ExPASy TrEMBL
Match: A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.0e-25
Identity = 76/199 (38.19%), Postives = 110/199 (55.28%), Query Frame = 0


Query: 17  NLMQWASDYLQSFQNAAVRCFQSVVLQQAQSMRVVVSWVPPAENELKLNIDESVRPESGA 76
           +L+ W+ +YLQ +Q A      ++V+   +  RV + W PPA   LK+N+D + R ES  
Sbjct: 70  DLVSWSENYLQVYQAAQRSSXSALVV--CRPPRVAI-WRPPAAPLLKVNVDAAFRKESFV 129

Query: 77  ASGGAVLRNHRGEVLLMACEILPKCWNVDLAEGWAMLRGIQIARQMGFSSFHVETDSLRL 136
           A  G ++R+  G V L A  +L +  +VD  EG+A+  GI +A + GF  F +ETDSLR+
Sbjct: 130 AGVGVIIRDSTGLVYLTAIRLLARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRI 189

Query: 137 SRVLTDDVDDISEVGAIMEEIRGLLRQDSS-CRVLFTPRQGNLVAHTMASLAFLYANF-I 196
             +LT D  D SEVG +   I+  L   +      FT R GN  AH +A LA    +  I
Sbjct: 190 FNLLTTDCVDDSEVGVLCSVIKLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTSPHLQI 249

Query: 197 WLEDWPIEATDVLVRDLSS 214
           W+E+WP E + VL  D  S
Sbjct: 250 WVEEWPDEISSVLAVDCRS 265

[Close]

BLAST of Lcy02g011870 vs. ExPASy TrEMBL
Match: A0A6J1CIF1 (uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011237 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 7.7e-22
Identity = 63/191 (32.98%), Postives = 98/191 (51.31%), Query Frame = 0


Query: 18  LMQWASDYLQSFQNAAVRCFQSVVLQQAQSMRVVVSWVPPAENELKLNIDESVRPESGAA 77
           L++WA+ Y+  F+ A    F   V   A+     V W+PP +   K+N D S       A
Sbjct: 3   LVEWANKYVMEFREANSNPFPGRVTNTAE-----VLWLPPDKRIYKINTDASFLASDQHA 62

Query: 78  SGGAVLRNHRGEVLLMACEILPKCWNVDLAEGWAMLRGIQIARQMGFSSFHVETDSLRLS 137
             G ++RN RG+V+  A + L    +VD+AE    + G+Q+A ++G +   +ETDS R+ 
Sbjct: 63  GLGIIIRNDRGQVMASATKYLENIQSVDMAEAIVAVEGLQLASKIGVNPVILETDSSRIF 122

Query: 138 RVLTDDVDDISEVGAIMEEIRGLLRQDSSCRVLFTPRQGNLVAHTMASLAFLYANF-IWL 197
            + +   +D+SE G I+ + +    Q       F  R+GN  AH +A  A L   F IW+
Sbjct: 123 NLFSQPSEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRALLLREFSIWM 182

Query: 198 EDWPIEATDVL 208
           EDWP+E    L
Sbjct: 183 EDWPLELKSCL 188

[Close]

BLAST of Lcy02g011870 vs. ExPASy TrEMBL
Match: A0A7J7GYW5 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_016191 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-19
Identity = 58/164 (35.37%), Postives = 90/164 (54.88%), Query Frame = 0


Query: 52  VSWVPPAENELKLNIDESVRPESGAASGGAVLRNHRGEVLLMACEILPKCWNVDLAEGWA 111
           V W  PA   LK+N D ++  E  A   G V+RNH GEV+    E LP   + D AE +A
Sbjct: 666 VGWCAPANGWLKINFDGALFKELKAVGVGVVIRNHLGEVMAALSERLPFWVDSDCAEAYA 725

Query: 112 MLRGIQIARQMGFSSFHVETDSLRLSRVLTDDVDDISEVGAIMEEIRGLLRQDSSCRVLF 171
             + +++AR +GFS  H+E DSLR+ + L ++ + +SE G I+ +  G  +  S   V  
Sbjct: 726 ATKAVELARDLGFSDIHLEGDSLRIVKALREEAEFMSEYGHILLQTVGACKSFSRFHVSH 785

Query: 172 TPRQGNLVAHTMASLAFLYANF--IWLEDWPIEATDVLVRDLSS 214
             RQGN +AH +A +A  + N+  +W+ D P     +   ++SS
Sbjct: 786 VGRQGNGLAHGLARMA-RHQNYQQVWMGDLPASLIAIATSEVSS 828

[Close]

BLAST of Lcy02g011870 vs. ExPASy TrEMBL
Match: A0A2P6SAP1 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0328181 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.7e-17
Identity = 63/203 (31.03%), Postives = 97/203 (47.78%), Query Frame = 0


Query: 10   GREYDDRNLMQWASDYLQSFQNAAVRCFQSVVLQQAQSMRVVVSWVPPAENELKLNIDES 69
            G  ++  N  QWAS +L  +Q       Q    +Q +S R    W  P    LK+NID S
Sbjct: 1016 GSVFNAYNAAQWASKFLGEYQ-------QVHPTRQKKSGRTRAKWENPPTGRLKINIDGS 1075

Query: 70   VRPESGAASGGAVLRNHRGEVLLMACEILPKCWNVDLAEGWAMLRGIQIARQMGFSSFHV 129
             RPESG    G V+R+ +G  +       P   +    E  A   G+ +A    +  F +
Sbjct: 1076 YRPESGDGGIGVVIRDDKGSCMAAMARYFPNVLSAFHMEAEACRAGLLLAIYQEWDEFIL 1135

Query: 130  ETDSLRLSRVLTDDVDDISEVGAIMEEIRGLLRQDSSCRVLFTPRQGNLVAHTMASLA-F 189
            E+D   +   L  +++D SEVG I+++ +  L    S ++    R+ N VA+ +A LA  
Sbjct: 1136 ESDCSLMVAALNQNLEDRSEVGRIIDDCKSYLTSLHSIKISHVFREANGVANRLAHLARS 1195

Query: 190  LYANFIWLEDWPIEATDVLVRDL 212
             + N +WLE+ P+   DVL  DL
Sbjct: 1196 KFLNDVWLEEAPVIIQDVLYEDL 1211

[Close]

BLAST of Lcy02g011870 vs. ExPASy TrEMBL
Match: A0A7J7G0B6 (RNase H domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_030294 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16
Identity = 55/161 (34.16%), Postives = 86/161 (53.42%), Query Frame = 0


Query: 51  VVSWVPPAENELKLNIDESVRPESGAASGGAVLRNHRGEVLLMACEILPKCWNVDLAEGW 110
           VV W  PAE   K+N D +   E      G V+RN  GEV+    E LP   + D AE +
Sbjct: 141 VVRWCAPAEGWFKINFDGAWFKELQTVGVGVVIRNSMGEVMGAMSEQLPFWVDADCAEAF 200

Query: 111 AMLRGIQIARQMGFSSFHVETDSLRLSRVLTDDVDDISEVGAIMEEIRGLLRQDSSCRVL 170
           A  + I++A+ +GFS   +E DSL + + L +DV+ + E G ++ ++ G  R   S +V 
Sbjct: 201 AAAKAIELAKYLGFSDIILEGDSLNIVKALWEDVELLPEYGHLVSQVVGASRLFRSFQVC 260

Query: 171 FTPRQGNLVAHTMASLA-FLYANFIWLEDWPIEATDVLVRD 211
              R GN++AH +A +A  L    +W+E+ P    +V+  D
Sbjct: 261 HVGRMGNMLAHGLAWMARDLDHQLVWMEEVPQALIEVVAAD 301

[Close]

BLAST of Lcy02g011870 vs. NCBI nr
Match: XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia])

HSP 1 Score: 125.9 bits (315), Expect = 4.0e-25
Identity = 76/199 (38.19%), Postives = 110/199 (55.28%), Query Frame = 0


Query: 17  NLMQWASDYLQSFQNAAVRCFQSVVLQQAQSMRVVVSWVPPAENELKLNIDESVRPESGA 76
           +L+ W+ +YLQ +Q A      ++V+   +  RV + W PPA   LK+N+D + R ES  
Sbjct: 70  DLVSWSENYLQVYQAAQRSSXSALVV--CRPPRVAI-WRPPAAPLLKVNVDAAFRKESFV 129

Query: 77  ASGGAVLRNHRGEVLLMACEILPKCWNVDLAEGWAMLRGIQIARQMGFSSFHVETDSLRL 136
           A  G ++R+  G V L A  +L +  +VD  EG+A+  GI +A + GF  F +ETDSLR+
Sbjct: 130 AGVGVIIRDSTGLVYLTAIRLLARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRI 189

Query: 137 SRVLTDDVDDISEVGAIMEEIRGLLRQDSS-CRVLFTPRQGNLVAHTMASLAFLYANF-I 196
             +LT D  D SEVG +   I+  L   +      FT R GN  AH +A LA    +  I
Sbjct: 190 FNLLTTDCVDDSEVGVLCSVIKLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTSPHLQI 249

Query: 197 WLEDWPIEATDVLVRDLSS 214
           W+E+WP E + VL  D  S
Sbjct: 250 WVEEWPDEISSVLAVDCRS 265

[Close]

BLAST of Lcy02g011870 vs. NCBI nr
Match: XP_022140628.1 (uncharacterized protein LOC111011237 [Momordica charantia])

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-21
Identity = 63/191 (32.98%), Postives = 98/191 (51.31%), Query Frame = 0


Query: 18  LMQWASDYLQSFQNAAVRCFQSVVLQQAQSMRVVVSWVPPAENELKLNIDESVRPESGAA 77
           L++WA+ Y+  F+ A    F   V   A+     V W+PP +   K+N D S       A
Sbjct: 3   LVEWANKYVMEFREANSNPFPGRVTNTAE-----VLWLPPDKRIYKINTDASFLASDQHA 62

Query: 78  SGGAVLRNHRGEVLLMACEILPKCWNVDLAEGWAMLRGIQIARQMGFSSFHVETDSLRLS 137
             G ++RN RG+V+  A + L    +VD+AE    + G+Q+A ++G +   +ETDS R+ 
Sbjct: 63  GLGIIIRNDRGQVMASATKYLENIQSVDMAEAIVAVEGLQLASKIGVNPVILETDSSRIF 122

Query: 138 RVLTDDVDDISEVGAIMEEIRGLLRQDSSCRVLFTPRQGNLVAHTMASLAFLYANF-IWL 197
            + +   +D+SE G I+ + +    Q       F  R+GN  AH +A  A L   F IW+
Sbjct: 123 NLFSQPSEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRALLLREFSIWM 182

Query: 198 EDWPIEATDVL 208
           EDWP+E    L
Sbjct: 183 EDWPLELKSCL 188

[Close]

BLAST of Lcy02g011870 vs. NCBI nr
Match: XP_028115288.1 (uncharacterized protein LOC114313136 isoform X3 [Camellia sinensis])

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-19
Identity = 59/164 (35.98%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 52  VSWVPPAENELKLNIDESVRPESGAASGGAVLRNHRGEVLLMACEILPKCWNVDLAEGWA 111
           V W  PA   LK+N D ++  E  A   G V+RNH GEV+    E LP   + D AE +A
Sbjct: 657 VGWCAPANGWLKINFDGALFKELKAVGVGVVIRNHLGEVMAALSERLPFWVDSDCAEAYA 716

Query: 112 MLRGIQIARQMGFSSFHVETDSLRLSRVLTDDVDDISEVGAIMEEIRGLLRQDSSCRVLF 171
             + +++AR +G S  H+E DSLR+ +VL ++ + +SE G I+ +  G+ +  S   V  
Sbjct: 717 ATKAVELARDLGLSDIHLEGDSLRIVKVLREEAEFMSEYGHILLQTVGVCKSFSRFHVSH 776

Query: 172 TPRQGNLVAHTMASLAFLYANF--IWLEDWPIEATDVLVRDLSS 214
             RQGN +AH +A +A  + N+  +W+E  P     +   D+SS
Sbjct: 777 VGRQGNGLAHGLARMA-RHQNYHQVWMEGLPASLIAIATSDVSS 819

[Close]

BLAST of Lcy02g011870 vs. NCBI nr
Match: XP_028115297.1 (uncharacterized protein LOC114313136 isoform X6 [Camellia sinensis] >XP_028115298.1 uncharacterized protein LOC114313136 isoform X6 [Camellia sinensis] >XP_028115299.1 uncharacterized protein LOC114313136 isoform X6 [Camellia sinensis] >XP_028115300.1 uncharacterized protein LOC114313136 isoform X6 [Camellia sinensis] >XP_028115301.1 uncharacterized protein LOC114313136 isoform X6 [Camellia sinensis])

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-19
Identity = 59/164 (35.98%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 52  VSWVPPAENELKLNIDESVRPESGAASGGAVLRNHRGEVLLMACEILPKCWNVDLAEGWA 111
           V W  PA   LK+N D ++  E  A   G V+RNH GEV+    E LP   + D AE +A
Sbjct: 667 VGWCAPANGWLKINFDGALFKELKAVGVGVVIRNHLGEVMAALSERLPFWVDSDCAEAYA 726

Query: 112 MLRGIQIARQMGFSSFHVETDSLRLSRVLTDDVDDISEVGAIMEEIRGLLRQDSSCRVLF 171
             + +++AR +G S  H+E DSLR+ +VL ++ + +SE G I+ +  G+ +  S   V  
Sbjct: 727 ATKAVELARDLGLSDIHLEGDSLRIVKVLREEAEFMSEYGHILLQTVGVCKSFSRFHVSH 786

Query: 172 TPRQGNLVAHTMASLAFLYANF--IWLEDWPIEATDVLVRDLSS 214
             RQGN +AH +A +A  + N+  +W+E  P     +   D+SS
Sbjct: 787 VGRQGNGLAHGLARMA-RHQNYHQVWMEGLPASLIAIATSDVSS 829

[Close]

BLAST of Lcy02g011870 vs. NCBI nr
Match: XP_028115286.1 (uncharacterized protein LOC114313136 isoform X1 [Camellia sinensis])

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-19
Identity = 59/164 (35.98%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 52  VSWVPPAENELKLNIDESVRPESGAASGGAVLRNHRGEVLLMACEILPKCWNVDLAEGWA 111
           V W  PA   LK+N D ++  E  A   G V+RNH GEV+    E LP   + D AE +A
Sbjct: 700 VGWCAPANGWLKINFDGALFKELKAVGVGVVIRNHLGEVMAALSERLPFWVDSDCAEAYA 759

Query: 112 MLRGIQIARQMGFSSFHVETDSLRLSRVLTDDVDDISEVGAIMEEIRGLLRQDSSCRVLF 171
             + +++AR +G S  H+E DSLR+ +VL ++ + +SE G I+ +  G+ +  S   V  
Sbjct: 760 ATKAVELARDLGLSDIHLEGDSLRIVKVLREEAEFMSEYGHILLQTVGVCKSFSRFHVSH 819

Query: 172 TPRQGNLVAHTMASLAFLYANF--IWLEDWPIEATDVLVRDLSS 214
             RQGN +AH +A +A  + N+  +W+E  P     +   D+SS
Sbjct: 820 VGRQGNGLAHGLARMA-RHQNYHQVWMEGLPASLIAIATSDVSS 862

[Close]

BLAST of Lcy02g011870 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 4.6e-11
Identity = 52/184 (28.26%), Postives = 91/184 (49.46%), Query Frame = 0


Query: 10  GREYDDRNLMQWASDYLQSF--QNAAVRCFQSVVLQQAQSMRVVVSWVPPAENELKLNID 69
           GRE++ + +++ A D L+ +  +  A  C     + ++   R    W PP    +K N D
Sbjct: 378 GREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGR----WRPPPHQWVKCNTD 437

Query: 70  ESVRPESGAASGGAVLRNHRGEVLLMACEILPKCWNVDLAEGWAMLRGIQIARQMGFSSF 129
            +   ++     G VLRN +GEV  M    LPK  +V  AE  AM   +    +  ++  
Sbjct: 438 ATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYNYV 497

Query: 130 HVETDSLRLSRVLTDDVDDISEVGAIMEEIRGLLRQDSSCRVLFTPRQGNLVAHTMA--S 189
             E+DS  L  +L +D +    +   +++++ LL Q +  + +F PR+GN +A  +A  S
Sbjct: 498 IFESDSQVLIEILNND-EIWPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVARES 556

The following BLAST results are available for this feature:

BLAST of Lcy02g011870 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy02g011870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBJ7	2.0e-25	38.19	uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1CIF1	7.7e-22	32.98	uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A7J7GYW5	1.6e-19	35.37	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_016191 PE=3 SV=1	[more]
A0A2P6SAP1	5.7e-17	31.03	Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1...	[more]
A0A7J7G0B6	1.7e-16	34.16	RNase H domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_030294 P...	[more]

BLAST of Lcy02g011870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150944.1	4.0e-25	38.19	uncharacterized protein LOC111018973 [Momordica charantia]	[more]
XP_022140628.1	1.6e-21	32.98	uncharacterized protein LOC111011237 [Momordica charantia]	[more]
XP_028115288.1	1.1e-19	35.98	uncharacterized protein LOC114313136 isoform X3 [Camellia sinensis]	[more]
XP_028115297.1	1.1e-19	35.98	uncharacterized protein LOC114313136 isoform X6 [Camellia sinensis] >XP_02811529...	[more]
XP_028115286.1	1.1e-19	35.98	uncharacterized protein LOC114313136 isoform X1 [Camellia sinensis]	[more]

BLAST of Lcy02g011870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	4.6e-11	28.26	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 66..187 e-value: 4.9E-25 score: 87.7
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 60..188 e-value: 2.5E-12 score: 49.0
None	No IPR available	PANTHER	PTHR47723	OS05G0353850 PROTEIN	coord: 42..201
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 64..184 e-value: 1.81646E-22 score: 86.214
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 62..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g011870.1	Lcy02g011870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity