Lcy02g011700 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g011700
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein
Location	Chr02: 35276676 .. 35277012 (-)
RNA-Seq Expression	Lcy02g011700
Synteny	Lcy02g011700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGAAAAAGTGAAGGTTGCAATCTATAGACATGAAGGAAAACATGTAGATGAACTCTCGTCTTTTTATAAGGTGGTGCATCAAATTCTAATTGATCGTTGGAACAAAAATAACACTCCACTCCATTGTTTGGCACATTCTCTAAACCCAAGGTACTCTAATACATCTTAGATGTTCTTTTTGTCGTAAGAAAAAAAAAATTCTACGCACACTCTATAGTTTGATGTATTTTAAAATTTTATTTAGGTATTATAGTGAACAATGGCTTCAAGAAGACAAGAATCGAGTCCCACCACATAAAGATTTAGAAGTATCTCTGGAGAAGATGAAGTGA

mRNA sequence

ATGATTGAAAAAGTGAAGGTTGCAATCTATAGACATGAAGGAAAACATGTAGATGAACTCTCGTCTTTTTATAAGGTGGTGCATCAAATTCTAATTGATCGTTGGAACAAAAATAACACTCCACTCCATTGTTTGGCACATTCTCTAAACCCAAGGTATTATAGTGAACAATGGCTTCAAGAAGACAAGAATCGAGTCCCACCACATAAAGATTTAGAAGTATCTCTGGAGAAGATGAAGTGA

Coding sequence (CDS)

ATGATTGAAAAAGTGAAGGTTGCAATCTATAGACATGAAGGAAAACATGTAGATGAACTCTCGTCTTTTTATAAGGTGGTGCATCAAATTCTAATTGATCGTTGGAACAAAAATAACACTCCACTCCATTGTTTGGCACATTCTCTAAACCCAAGGTATTATAGTGAACAATGGCTTCAAGAAGACAAGAATCGAGTCCCACCACATAAAGATTTAGAAGTATCTCTGGAGAAGATGAAGTGA

Protein sequence

MIEKVKVAIYRHEGKHVDELSSFYKVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQEDKNRVPPHKDLEVSLEKMK

Homology

[Close]

BLAST of Lcy02g011700 vs. ExPASy TrEMBL
Match: A0A6J1DT13 (uncharacterized protein LOC111023231 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023231 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 69/80 (86.25%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MIEKVKVAIYRHEGKHVDELSSFYKVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 60
           MIEKVK AIYR++GKH+D++SSFY+VVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ
Sbjct: 615 MIEKVKAAIYRYKGKHLDKISSFYRVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 674

Query: 61  EDKNRVPPHKDLEVSLEKMK 81
           EDKNRVPPH+DLEV+ E+MK
Sbjct: 675 EDKNRVPPHQDLEVTRERMK 694

[Close]

BLAST of Lcy02g011700 vs. ExPASy TrEMBL
Match: A0A6J1DUJ6 (uncharacterized protein LOC111023231 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023231 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 69/80 (86.25%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MIEKVKVAIYRHEGKHVDELSSFYKVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 60
           MIEKVK AIYR++GKH+D++SSFY+VVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ
Sbjct: 479 MIEKVKAAIYRYKGKHLDKISSFYRVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 538

Query: 61  EDKNRVPPHKDLEVSLEKMK 81
           EDKNRVPPH+DLEV+ E+MK
Sbjct: 539 EDKNRVPPHQDLEVTRERMK 558

[Close]

BLAST of Lcy02g011700 vs. ExPASy TrEMBL
Match: A0A443N8D6 (DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00314100 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.4e-30
Identity = 62/80 (77.50%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 1   MIEKVKVAIYRHEGKHVDELSSFYKVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 60
           MIEKVK  I+RHEGK  DELS FY VVHQIL+D WNKNNTPLHCLAHSLNPRYYS++WLQ
Sbjct: 491 MIEKVKTTIFRHEGKRHDELSGFYDVVHQILVDHWNKNNTPLHCLAHSLNPRYYSDEWLQ 550

Query: 61  EDKNRVPPHKDLEVSLEKMK 81
           ED +RVPP+KD+EVS E+ K
Sbjct: 551 EDPSRVPPYKDVEVSRERKK 570

[Close]

BLAST of Lcy02g011700 vs. ExPASy TrEMBL
Match: A0A3S3MGR4 (DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01212600 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 7.1e-29
Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 0


Query: 1   MIEKVKVAIYRHEGKHVDELSSFYKVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 60
           MIEKVK AIYRHEGK +DE S+FY+VVH+IL+DRWNKNNTPLHCLAHSLNPRYYSE WL 
Sbjct: 289 MIEKVKGAIYRHEGKILDETSTFYEVVHKILVDRWNKNNTPLHCLAHSLNPRYYSEHWLH 348

Query: 61  EDKNRVPPHKDLEVSLEKMK 81
           ED +RV  H+D+EV+ E+MK
Sbjct: 349 EDPSRVASHRDMEVARERMK 368

[Close]

BLAST of Lcy02g011700 vs. ExPASy TrEMBL
Match: A0A7J0FQI8 (BED-type domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_14g0005460 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.3e-29
Identity = 61/80 (76.25%), Postives = 69/80 (86.25%), Query Frame = 0


Query: 1   MIEKVKVAIYRHEGKHVDELSSFYKVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 60
           MIE+VK AIYRHEGK  +E S+FY V+HQIL+DRWNKNNTPLHCLAHSLNPRYYS+ WL 
Sbjct: 431 MIEQVKAAIYRHEGKMHEEDSTFYGVIHQILVDRWNKNNTPLHCLAHSLNPRYYSDDWLH 490

Query: 61  EDKNRVPPHKDLEVSLEKMK 81
           E  NRVPPHKD EVS E++K
Sbjct: 491 ESANRVPPHKDEEVSRERLK 510

[Close]

BLAST of Lcy02g011700 vs. NCBI nr
Match: XP_022156306.1 (uncharacterized protein LOC111023231 isoform X2 [Momordica charantia])

HSP 1 Score: 155.2 bits (391), Expect = 2.3e-34
Identity = 69/80 (86.25%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MIEKVKVAIYRHEGKHVDELSSFYKVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 60
           MIEKVK AIYR++GKH+D++SSFY+VVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ
Sbjct: 479 MIEKVKAAIYRYKGKHLDKISSFYRVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 538

Query: 61  EDKNRVPPHKDLEVSLEKMK 81
           EDKNRVPPH+DLEV+ E+MK
Sbjct: 539 EDKNRVPPHQDLEVTRERMK 558

[Close]

BLAST of Lcy02g011700 vs. NCBI nr
Match: XP_022156304.1 (uncharacterized protein LOC111023231 isoform X1 [Momordica charantia])

HSP 1 Score: 155.2 bits (391), Expect = 2.3e-34
Identity = 69/80 (86.25%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MIEKVKVAIYRHEGKHVDELSSFYKVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 60
           MIEKVK AIYR++GKH+D++SSFY+VVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ
Sbjct: 615 MIEKVKAAIYRYKGKHLDKISSFYRVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 674

Query: 61  EDKNRVPPHKDLEVSLEKMK 81
           EDKNRVPPH+DLEV+ E+MK
Sbjct: 675 EDKNRVPPHQDLEVTRERMK 694

[Close]

BLAST of Lcy02g011700 vs. NCBI nr
Match: XP_028104766.1 (uncharacterized protein LOC114303817 [Camellia sinensis])

HSP 1 Score: 140.6 bits (353), Expect = 6.0e-30
Identity = 60/80 (75.00%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1   MIEKVKVAIYRHEGKHVDELSSFYKVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 60
           MIEKVK++IYRHEGK +DE S+FY VVHQIL+DRWNKNNTPLHC+AHSLNP+YYS++WL 
Sbjct: 230 MIEKVKMSIYRHEGKRIDEESTFYNVVHQILVDRWNKNNTPLHCMAHSLNPKYYSDEWLH 289

Query: 61  EDKNRVPPHKDLEVSLEKMK 81
           ED+NRVPPH+D EV+ E+ K
Sbjct: 290 EDQNRVPPHRDEEVTRERNK 309

[Close]

BLAST of Lcy02g011700 vs. NCBI nr
Match: XP_028060997.1 (uncharacterized protein LOC114264544 [Camellia sinensis])

HSP 1 Score: 140.6 bits (353), Expect = 6.0e-30
Identity = 60/80 (75.00%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1   MIEKVKVAIYRHEGKHVDELSSFYKVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 60
           MIEKVK++IYRHEGK +DE S+FY VVHQIL+DRWNKNNTPLHC+AHSLNP+YYS++WL 
Sbjct: 68  MIEKVKMSIYRHEGKRIDEESTFYNVVHQILVDRWNKNNTPLHCMAHSLNPKYYSDEWLH 127

Query: 61  EDKNRVPPHKDLEVSLEKMK 81
           ED+NRVPPH+D EV+ E+ K
Sbjct: 128 EDQNRVPPHRDEEVTRERNK 147

[Close]

BLAST of Lcy02g011700 vs. NCBI nr
Match: XP_028113472.1 (uncharacterized protein LOC114311527 [Camellia sinensis])

HSP 1 Score: 140.6 bits (353), Expect = 6.0e-30
Identity = 60/80 (75.00%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1  MIEKVKVAIYRHEGKHVDELSSFYKVVHQILIDRWNKNNTPLHCLAHSLNPRYYSEQWLQ 60
          MIEKVK++IYRHEGK +DE S+FY VVHQIL+DRWNKNNTPLHC+AHSLNP+YYS++WL 
Sbjct: 1  MIEKVKMSIYRHEGKRIDEESTFYNVVHQILVDRWNKNNTPLHCMAHSLNPKYYSDEWLH 60

Query: 61 EDKNRVPPHKDLEVSLEKMK 81
          ED+NRVPPH+D EV+ E+ K
Sbjct: 61 EDQNRVPPHRDEEVTRERNK 80

The following BLAST results are available for this feature:

BLAST of Lcy02g011700 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy02g011700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DT13	1.1e-34	86.25	uncharacterized protein LOC111023231 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DUJ6	1.1e-34	86.25	uncharacterized protein LOC111023231 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A443N8D6	8.4e-30	77.50	DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein OS=Cinn...	[more]
A0A3S3MGR4	7.1e-29	76.25	DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein OS=Cinn...	[more]
A0A7J0FQI8	9.3e-29	76.25	BED-type domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_14g0005460...	[more]

BLAST of Lcy02g011700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156306.1	2.3e-34	86.25	uncharacterized protein LOC111023231 isoform X2 [Momordica charantia]	[more]
XP_022156304.1	2.3e-34	86.25	uncharacterized protein LOC111023231 isoform X1 [Momordica charantia]	[more]
XP_028104766.1	6.0e-30	75.00	uncharacterized protein LOC114303817 [Camellia sinensis]	[more]
XP_028060997.1	6.0e-30	75.00	uncharacterized protein LOC114264544 [Camellia sinensis]	[more]
XP_028113472.1	6.0e-30	75.00	uncharacterized protein LOC114311527 [Camellia sinensis]	[more]

BLAST of Lcy02g011700 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32166	OSJNBA0013A04.12 PROTEIN	coord: 1..80
None	No IPR available	PANTHER	PTHR32166:SF81	HAT TRANSPOSON SUPERFAMILY PROTEIN	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g011700.1	Lcy02g011700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0046983	protein dimerization activity