Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGCCCAAGTGAGTCTGAGACTGGATCGTTTCATTGTTAATCCAAATTTTTGCTCACTTTTTGAGAACTTTCAGGTGACCAATTTGGATTGGGCGAAATCTGATCACCGACCAATCGAGCTTCATGTGGAGGGTTTGTCTTCTTCGAGGGTTAGAGGTCGGAGGCGGAGAATTTTTAAATTTGAGGAGGGGGACCCGTAATGACGACTATATAAATATTATTCGAAGATCTGGAGCTTGGGAGTGCACTTCGATACCAACACAACCTTTGCATAAAGTTCTTAAAAACTGTGCATCTGTGCTGGGAGGGTGGGGATCCTGTCAGAATAAAAGACTGAGGCTTGATATCAAAGAAATGAAAGACAAAATTAAATTGGCTTATGATTGTGTATCGCCGATTAATTTTGATGAAATTCATCATTTGGAACGTCAATTGGATTCTTTACTCCTGGATGATGAAATTTACTGGAAGCAACGTTCTCGAGAGAATTGGCTCAATTGGGGGGACCGCAATACCAGATGGTTTCATCAGAAAGCTTCGATGGGACGGCGGCGGAATTGGATTTGTGGAATTGAGGATGCGGATGGAGTTTGGAGAACAGATACTTCTGAGGTTCAGGACATCTTCCTGAAGTATTTTATGAATATATTCACATCTAATAAACCGGATATGGGGGACGTGGATAAGATCATTGGTTTTGTCCCTAGAAGAATTACTGCGGAGATGAATCAGAGGCTTATATCTCATTTTTCTAAGGAAGAAGTGATCTCAGCAATCAAAAGTTTTCCCCCGACAAAAGCACCTGGCCCAGATGGATTCCCTGCTCTATTTTATCATAAATACTGGGACATTGTGGGTCTTACAACAATCTCCAATTGTTTGGCTATTTTGAATTCGGATGAGCCAGTGTAG
mRNA sequence
ATGGGGGCCCAAGTGAGTCTGAGACTGGATCGTTTCATTGTTAATCCAAATTTTTGCTCACTTTTTGAGAACTTTCAGGTGACCAATTTGGATTGGGCGAAATCTGATCACCGACCAATCGAGCTTCATGTGGAGGGTTTGTCTTCTTCGAGGAATAAAAGACTGAGGCTTGATATCAAAGAAATGAAAGACAAAATTAAATTGGCTTATGATTGTGTATCGCCGATTAATTTTGATGAAATTCATCATTTGGAACGTCAATTGGATTCTTTACTCCTGGATGATGAAATTTACTGGAAGCAACGTTCTCGAGAGAATTGGCTCAATTGGGGGGACCGCAATACCAGATGGTTTCATCAGAAAGCTTCGATGGGACGGCGGCGGAATTGGATTTGTGGAATTGAGGATGCGGATGGAGTTTGGAGAACAGATACTTCTGAGGTTCAGGACATCTTCCTGAAGTATTTTATGAATATATTCACATCTAATAAACCGGATATGGGGGACGTGGATAAGATCATTGGTTTTGTCCCTAGAAGAATTACTGCGGAGATGAATCAGAGGCTTATATCTCATTTTTCTAAGGAAGAAGTGATCTCAGCAATCAAAAGTTTTCCCCCGACAAAAGCACCTGGCCCAGATGGATTCCCTGCTCTATTTTATCATAAATACTGGGACATTGTGGGTCTTACAACAATCTCCAATTGTTTGGCTATTTTGAATTCGGATGAGCCAGTGTAG
Coding sequence (CDS)
ATGGGGGCCCAAGTGAGTCTGAGACTGGATCGTTTCATTGTTAATCCAAATTTTTGCTCACTTTTTGAGAACTTTCAGGTGACCAATTTGGATTGGGCGAAATCTGATCACCGACCAATCGAGCTTCATGTGGAGGGTTTGTCTTCTTCGAGGAATAAAAGACTGAGGCTTGATATCAAAGAAATGAAAGACAAAATTAAATTGGCTTATGATTGTGTATCGCCGATTAATTTTGATGAAATTCATCATTTGGAACGTCAATTGGATTCTTTACTCCTGGATGATGAAATTTACTGGAAGCAACGTTCTCGAGAGAATTGGCTCAATTGGGGGGACCGCAATACCAGATGGTTTCATCAGAAAGCTTCGATGGGACGGCGGCGGAATTGGATTTGTGGAATTGAGGATGCGGATGGAGTTTGGAGAACAGATACTTCTGAGGTTCAGGACATCTTCCTGAAGTATTTTATGAATATATTCACATCTAATAAACCGGATATGGGGGACGTGGATAAGATCATTGGTTTTGTCCCTAGAAGAATTACTGCGGAGATGAATCAGAGGCTTATATCTCATTTTTCTAAGGAAGAAGTGATCTCAGCAATCAAAAGTTTTCCCCCGACAAAAGCACCTGGCCCAGATGGATTCCCTGCTCTATTTTATCATAAATACTGGGACATTGTGGGTCTTACAACAATCTCCAATTGTTTGGCTATTTTGAATTCGGATGAGCCAGTGTAG
Protein sequence
MGAQVSLRLDRFIVNPNFCSLFENFQVTNLDWAKSDHRPIELHVEGLSSSRNKRLRLDIKEMKDKIKLAYDCVSPINFDEIHHLERQLDSLLLDDEIYWKQRSRENWLNWGDRNTRWFHQKASMGRRRNWICGIEDADGVWRTDTSEVQDIFLKYFMNIFTSNKPDMGDVDKIIGFVPRRITAEMNQRLISHFSKEEVISAIKSFPPTKAPGPDGFPALFYHKYWDIVGLTTISNCLAILNSDEPV
Homology
BLAST of Lcy02g011580 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 60.1 bits (144), Expect = 4.1e-08
Identity = 29/100 (29.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query: 126 RRRNWICGIEDADGVWRTDTSEVQDIFLKYFMNIFTSNKPDMGDVDKIIG-FVPRRITAE 185
R +N I I++ G TD +E+Q +Y+ +++ + ++ ++D + + R+ E
Sbjct: 385 REKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQE 444
Query: 186 MNQRLISHFSKEEVISAIKSFPPTKAPGPDGFPALFYHKY 225
+ L + E+++ I S P K+PGPDGF A FY +Y
Sbjct: 445 EVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRY 484
BLAST of Lcy02g011580 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 50.4 bits (119), Expect = 3.3e-05
Identity = 31/128 (24.22%), Postives = 59/128 (46.09%), Query Frame = 0
Query: 102 RSRENWLNWGDRNTRWFHQKASMGRRRNWICGIEDADGVWRTDTSEVQDIFLKYFMNIFT 161
RSR L DR +R+F+ R I + DG D ++D ++ N+F+
Sbjct: 359 RSRMQLLCDMDRGSRFFYALEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLFS 418
Query: 162 SNKPDMGDVDKIIGFVPRRITAEMNQRLISHFSKEEVISAIKSFPPTKAPGPDGFPALFY 221
+ +++ +P ++ +RL + + +E+ A++ P K+PG DG F+
Sbjct: 419 PDPISPDACEELWDGLP-VVSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFF 478
Query: 222 HKYWDIVG 230
+WD +G
Sbjct: 479 QFFWDTLG 485
BLAST of Lcy02g011580 vs. ExPASy TrEMBL
Match:
A0A803P9M1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 173.3 bits (438), Expect = 1.2e-39
Identity = 95/275 (34.55%), Postives = 152/275 (55.27%), Query Frame = 0
Query: 8 RLDRFIVNPNFCSLFENFQVTNLDWAKSDHRPIELHVEGLSS------------------ 67
RLDR + N + F+ + LDW +SDHRP+ + + ++
Sbjct: 414 RLDRGLCNEEWLQNFDGADILVLDWWESDHRPLVVEMPIVAERERCGKVKRKSRFHFEEA 473
Query: 68 -----------------SRNKRLRLDIKEMKDKIKLAYDCVSPIN----FDEIHHLERQL 127
++NK+ L +K K+K A +SP + E+ LE+QL
Sbjct: 474 WGFKLKTKKVGAALRVWNKNKKKTLQVK--TKKLKKAISELSPRQDSSIWGELKTLEKQL 533
Query: 128 DSLLLDDEIYWKQRSRENWLNWGDRNTRWFHQKASMGRRRNWICGIEDADGVWRTDTSEV 187
+ +L DE YW+QRS+ WL WGD NT++F++KAS R++N I G+ D+ G+W+TDT+ +
Sbjct: 534 NVVLEKDEKYWRQRSQTLWLKWGDLNTKYFYRKASARRKKNEIKGLVDSMGIWQTDTTMI 593
Query: 188 QDIFLKYFMNIFTSNKPDMGDVDKIIGFVPRRITAEMNQRLISHFSKEEVISAIKSFPPT 244
+ + YF N+F+++ +M VD+++ V ++T MN+ L+ F+ EEVI+A+K+ P
Sbjct: 594 KKLIEDYFGNLFSTSNLNMDQVDEMLRRVRPKVTNIMNEVLMHPFAAEEVINAVKNMNPV 653
BLAST of Lcy02g011580 vs. ExPASy TrEMBL
Match:
A0A6J1DY29 (uncharacterized protein LOC111025237 OS=Momordica charantia OX=3673 GN=LOC111025237 PE=4 SV=1)
HSP 1 Score: 172.2 bits (435), Expect = 2.7e-39
Identity = 89/207 (43.00%), Postives = 129/207 (62.32%), Query Frame = 0
Query: 2 GAQVSLRLDRFIVNPNFCSLFENFQVTNLDWAKSDHRPIELHVEGLSSSRNKRLRLDIKE 61
G Q+ LDRF+ N +F SLF + + +L W+KSDHR I LH+ L SS+ KR ++
Sbjct: 52 GDQLWKCLDRFLCNDSFNSLFPDASIIHLPWSKSDHRAIGLHLYALPSSQIKRSHKPVRF 111
Query: 62 MKDKIKLAYDCVS-----PINFDEIHHLERQLDSLLLDDEIYWKQRSRENWLNWGDRNTR 121
+ ++ +C P++F IH +E L LL +EI+WKQRSRE+WL WGD N +
Sbjct: 112 EEYWVRNP-ECEQLISPLPLDFTIIHDIENDLAGLLELEEIFWKQRSREDWLKWGDCNFK 171
Query: 122 WFHQKASMGRRRNWICGIEDADGVWRTDTSEVQDIFLKYFMNIFTSNKPDMGDVDKIIGF 181
WFH+KA+M + N+I GIED G W + E+ +IF+ YF +IFTS P D+D I
Sbjct: 172 WFHKKATMRKSCNYIHGIEDQYGCWTEEPKEIGNIFITYFQDIFTSTSPLPLDIDSITTH 231
Query: 182 VPRRITAEMNQRLISHFSKEEVISAIK 204
+P RIT+E+N +L++ + EE+ AIK
Sbjct: 232 IPTRITSEINAQLLAPYKYEEIEIAIK 257
BLAST of Lcy02g011580 vs. ExPASy TrEMBL
Match:
A0A6J5TXB8 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS12969 PE=4 SV=1)
HSP 1 Score: 169.5 bits (428), Expect = 1.8e-38
Identity = 97/299 (32.44%), Postives = 158/299 (52.84%), Query Frame = 0
Query: 4 QVSLRLDRFIVNPNFCSLFENFQVTNLDWAKSDHRPIELHVEG--LSSSRNK-------- 63
++ +RLDR + ++C+ F +V +L+ KSDH PI + + LS++R++
Sbjct: 120 EIRIRLDRALATTDWCTRFPGTKVLHLNPTKSDHLPIRITISKRMLSNTRHRNLFRFEEM 179
Query: 64 ----------------------------------RLRL-------------DIKEMKDKI 123
RLRL IK ++ K+
Sbjct: 180 WVQHENCMETIREEWLQPESGSAPRAVTEKLKRTRLRLLGWSRGIFGSLPHQIKSIQTKL 239
Query: 124 -KLAYDCVSPINFDEIHHLERQLDSLLLDDEIYWKQRSRENWLNWGDRNTRWFHQKASMG 183
+L ++P + L +LDSL+ +EIYW+QRSR WL GDRNT++FH KAS
Sbjct: 240 GELLEAPLTPQTVETRKELTAKLDSLMAKNEIYWRQRSRALWLKAGDRNTKYFHYKASSR 299
Query: 184 RRRNWICGIEDADGVWRTDTSEVQDIFLKYFMNIFTSNKPDMGDVDKIIGFVPRRITAEM 243
+RRN I G+ED +G+W+T E+++ + YF +F+SN D +++ + R++ EM
Sbjct: 300 KRRNTISGLEDENGIWQTSEPELENTVVHYFQQLFSSN--GNTDYEEVADVMRGRVSEEM 359
Query: 244 NQRLISHFSKEEVISAIKSFPPTKAPGPDGFPALFYHKYWDIVGLTTISNCLAILNSDE 245
N++L++ F+ EE+ A+ P+KAPGPDGF LFY +YWD+VG+ +S L L++ +
Sbjct: 360 NRKLLADFTAEEIKHALFQMHPSKAPGPDGFSPLFYQQYWDVVGVDVVSAILHFLHTGQ 416
BLAST of Lcy02g011580 vs. ExPASy TrEMBL
Match:
A0A803PI64 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 167.5 bits (423), Expect = 6.8e-38
Identity = 79/198 (39.90%), Postives = 120/198 (60.61%), Query Frame = 0
Query: 44 VEGLSSSRNKRLRLDIKEMKDKIKLAYDCVSPINFDEIHHLERQLDSLLLDDEIYWKQRS 103
++ + + K L IK++K + P + E+ +E+QL+++L DE YW+QRS
Sbjct: 531 LDSWNRKKKKVLNQKIKKLKTTLIELSSSSDPGAWVEVKKIEKQLNAVLEKDEKYWRQRS 590
Query: 104 RENWLNWGDRNTRWFHQKASMGRRRNWICGIEDADGVWRTDTSEVQDIFLKYFMNIFTSN 163
R WL WGD NT++FH+KAS R++N I G+ D GVW ++ VQ + YF NIF S+
Sbjct: 591 RALWLKWGDLNTKFFHRKASARRKKNAIKGLMDDIGVWHSEAGMVQRLVENYFWNIFCSS 650
Query: 164 KPDMGDVDKIIGFVPRRITAEMNQRLISHFSKEEVISAIKSFPPTKAPGPDGFPALFYHK 223
+++I +P ++T +MN+ L+ F+ EE++ A+K PTKAPG DG PALFYHK
Sbjct: 651 SMPHDVFEEVINVIPPKVTDDMNEMLLEDFTAEEIVKAVKDMNPTKAPGCDGLPALFYHK 710
Query: 224 YWDIVGLTTISNCLAILN 242
+W + I CL +LN
Sbjct: 711 FWSNLKQDVIGMCLKVLN 728
BLAST of Lcy02g011580 vs. ExPASy TrEMBL
Match:
M5VU98 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa022115mg PE=4 SV=1)
HSP 1 Score: 166.4 bits (420), Expect = 1.5e-37
Identity = 99/297 (33.33%), Postives = 149/297 (50.17%), Query Frame = 0
Query: 5 VSLRLDRFIVNPNFCSLFENFQVTNLDWAKSDHRPIELHVEGLSSSRNKRLRLDIKEM-- 64
V +RLDR + ++ +LF F V +LD ++SDH PI + + + +++ R + M
Sbjct: 603 VRVRLDRALATTSWQNLFPGFSVQHLDPSRSDHLPILVRIRHATCQKSRYRRFHFEAMWT 662
Query: 65 -----KDKIKLAYDCV-----------------------SPINFDEIHH----------- 124
+ IK ++ V S F I
Sbjct: 663 THVDCEKTIKQVWESVGNLDPMVGLDKKIKQMTWVLQRWSKSTFGHIKEETRVLRAKLAS 722
Query: 125 ----------------LERQLDSLLLDDEIYWKQRSRENWLNWGDRNTRWFHQKASMGRR 184
+++ LD LL +E+YW QRSRENWL GD+NT +FHQKA+ RR
Sbjct: 723 LFQAPYSERVEEDRRVVQKSLDELLAKNELYWCQRSRENWLKAGDKNTSYFHQKATNRRR 782
Query: 185 RNWICGIEDADGVWRTDTSEVQDIFLKYFMNIFTSNKPDMGDVDKIIGFVPRRITAEMNQ 244
RN I G+ED++G WRT + I + YF ++F S+ M +++I+ + ++TA+M Q
Sbjct: 783 RNIIKGLEDSNGCWRTSRQGITSIVIDYFGDLFRSSGSSM--MEEILSALEPKVTADMQQ 842
BLAST of Lcy02g011580 vs. NCBI nr
Match:
XP_022158772.1 (uncharacterized protein LOC111025237 [Momordica charantia])
HSP 1 Score: 172.2 bits (435), Expect = 5.7e-39
Identity = 89/207 (43.00%), Postives = 129/207 (62.32%), Query Frame = 0
Query: 2 GAQVSLRLDRFIVNPNFCSLFENFQVTNLDWAKSDHRPIELHVEGLSSSRNKRLRLDIKE 61
G Q+ LDRF+ N +F SLF + + +L W+KSDHR I LH+ L SS+ KR ++
Sbjct: 52 GDQLWKCLDRFLCNDSFNSLFPDASIIHLPWSKSDHRAIGLHLYALPSSQIKRSHKPVRF 111
Query: 62 MKDKIKLAYDCVS-----PINFDEIHHLERQLDSLLLDDEIYWKQRSRENWLNWGDRNTR 121
+ ++ +C P++F IH +E L LL +EI+WKQRSRE+WL WGD N +
Sbjct: 112 EEYWVRNP-ECEQLISPLPLDFTIIHDIENDLAGLLELEEIFWKQRSREDWLKWGDCNFK 171
Query: 122 WFHQKASMGRRRNWICGIEDADGVWRTDTSEVQDIFLKYFMNIFTSNKPDMGDVDKIIGF 181
WFH+KA+M + N+I GIED G W + E+ +IF+ YF +IFTS P D+D I
Sbjct: 172 WFHKKATMRKSCNYIHGIEDQYGCWTEEPKEIGNIFITYFQDIFTSTSPLPLDIDSITTH 231
Query: 182 VPRRITAEMNQRLISHFSKEEVISAIK 204
+P RIT+E+N +L++ + EE+ AIK
Sbjct: 232 IPTRITSEINAQLLAPYKYEEIEIAIK 257
BLAST of Lcy02g011580 vs. NCBI nr
Match:
XP_024038343.1 (uncharacterized protein LOC112097373 [Citrus clementina])
HSP 1 Score: 171.8 bits (434), Expect = 7.4e-39
Identity = 93/235 (39.57%), Postives = 132/235 (56.17%), Query Frame = 0
Query: 14 VNP--NFCSLFENFQVTNLDWAKSDHRPIELHVEGLSSSRNKRLRLDIKEMKDKIKLAYD 73
VNP F + +N + W+K + R R K+L K M L
Sbjct: 231 VNPVSMFQKVSKNSMARLILWSKEEFR-----------GRQKKLE---KLMNQLRSLKLS 290
Query: 74 CVSPINFDEIHHLERQLDSLLLDDEIYWKQRSRENWLNWGDRNTRWFHQKASMGRRRNWI 133
V + ++I +ERQ+ +L DDEIYWKQRSR +WL GD+NT++FH KAS +++N I
Sbjct: 291 RVQYVKGNKIKEVERQIQYMLADDEIYWKQRSRADWLKGGDKNTKFFHHKASSRKKKNRI 350
Query: 134 CGIEDADGVWRTDTSEVQDIFLKYFMNIFTSNKPDMGDVDKIIGFVPRRITAEMNQRLIS 193
GIE+A G W + V+ F KYF N+FT++KP+ + + + RR++ EMN+ L
Sbjct: 351 WGIENAAGNWIENAEGVEFEFNKYFTNLFTTSKPNQDQIAAALSGISRRVSTEMNESLEM 410
Query: 194 HFSKEEVISAIKSFPPTKAPGPDGFPALFYHKYWDIVGLTTISNCLAILNSDEPV 247
F+ EEV+ A+ PTKAPGPDG PA+F+ K+W V +S CL ILN V
Sbjct: 411 PFTPEEVVEALTQMCPTKAPGPDGLPAVFFQKHWQRVKQGVLSTCLHILNKQGDV 451
BLAST of Lcy02g011580 vs. NCBI nr
Match:
XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])
HSP 1 Score: 171.8 bits (434), Expect = 7.4e-39
Identity = 81/187 (43.32%), Postives = 119/187 (63.64%), Query Frame = 0
Query: 59 IKEMKDKI-KLAYDCVSPINFDEIHHLERQLDSLLLDDEIYWKQRSRENWLNWGDRNTRW 118
+K++K K+ ++ ++ EI E Q++ +LLD+E+YWKQRSR +WL GD+NT++
Sbjct: 263 LKQLKKKLSEMKHNFTQREEVSEIKSTEEQIEKMLLDEEVYWKQRSRADWLKEGDKNTKY 322
Query: 119 FHQKASMGRRRNWICGIEDADGVWRTDTSEVQDIFLKYFMNIFTSNKPDMGDVDKIIGFV 178
FH KAS +R+N I G+ D VW D V+ F +YF ++FT++ P ++ + +
Sbjct: 323 FHSKASSRKRKNRIWGVMDQHDVWVDDREGVEKQFCEYFASLFTTSSPSEKQIEAALAGL 382
Query: 179 PRRITAEMNQRLISHFSKEEVISAIKSFPPTKAPGPDGFPALFYHKYWDIVGLTTISNCL 238
R+T EMN +L S F++EEV +A+ PTKAPGPDG PA F+ K+WD V L IS CL
Sbjct: 383 KPRVTLEMNNQLDSPFTEEEVSTALSQMCPTKAPGPDGLPAAFFQKHWDSVKLGVISTCL 442
Query: 239 AILNSDE 245
ILN E
Sbjct: 443 HILNGRE 449
BLAST of Lcy02g011580 vs. NCBI nr
Match:
CAB4268750.1 (unnamed protein product [Prunus armeniaca])
HSP 1 Score: 169.5 bits (428), Expect = 3.7e-38
Identity = 97/299 (32.44%), Postives = 158/299 (52.84%), Query Frame = 0
Query: 4 QVSLRLDRFIVNPNFCSLFENFQVTNLDWAKSDHRPIELHVEG--LSSSRNK-------- 63
++ +RLDR + ++C+ F +V +L+ KSDH PI + + LS++R++
Sbjct: 120 EIRIRLDRALATTDWCTRFPGTKVLHLNPTKSDHLPIRITISKRMLSNTRHRNLFRFEEM 179
Query: 64 ----------------------------------RLRL-------------DIKEMKDKI 123
RLRL IK ++ K+
Sbjct: 180 WVQHENCMETIREEWLQPESGSAPRAVTEKLKRTRLRLLGWSRGIFGSLPHQIKSIQTKL 239
Query: 124 -KLAYDCVSPINFDEIHHLERQLDSLLLDDEIYWKQRSRENWLNWGDRNTRWFHQKASMG 183
+L ++P + L +LDSL+ +EIYW+QRSR WL GDRNT++FH KAS
Sbjct: 240 GELLEAPLTPQTVETRKELTAKLDSLMAKNEIYWRQRSRALWLKAGDRNTKYFHYKASSR 299
Query: 184 RRRNWICGIEDADGVWRTDTSEVQDIFLKYFMNIFTSNKPDMGDVDKIIGFVPRRITAEM 243
+RRN I G+ED +G+W+T E+++ + YF +F+SN D +++ + R++ EM
Sbjct: 300 KRRNTISGLEDENGIWQTSEPELENTVVHYFQQLFSSN--GNTDYEEVADVMRGRVSEEM 359
Query: 244 NQRLISHFSKEEVISAIKSFPPTKAPGPDGFPALFYHKYWDIVGLTTISNCLAILNSDE 245
N++L++ F+ EE+ A+ P+KAPGPDGF LFY +YWD+VG+ +S L L++ +
Sbjct: 360 NRKLLADFTAEEIKHALFQMHPSKAPGPDGFSPLFYQQYWDVVGVDVVSAILHFLHTGQ 416
BLAST of Lcy02g011580 vs. NCBI nr
Match:
XP_015388020.1 (uncharacterized protein LOC107177951 [Citrus sinensis])
HSP 1 Score: 166.0 bits (419), Expect = 4.1e-37
Identity = 71/163 (43.56%), Postives = 106/163 (65.03%), Query Frame = 0
Query: 79 DEIHHLERQLDSLLLDDEIYWKQRSRENWLNWGDRNTRWFHQKASMGRRRNWICGIEDAD 138
D++ LERQ+D LL+D+EIYW+QRSR WL GD+NT++FH KAS +R+NWI GI D +
Sbjct: 182 DQVKLLERQIDDLLIDEEIYWRQRSRAVWLQEGDKNTKFFHSKASARKRKNWISGIVDEN 241
Query: 139 GVWRTDTSEVQDIFLKYFMNIFTSNKPDMGDVDKIIGFVPRRITAEMNQRLISHFSKEEV 198
W +++ +F +Y+ N+FTS P ++ + +P +++AEMN L F++ ++
Sbjct: 242 NRWSEKAEDIERMFCEYYHNLFTSTNPSQQHLELALRNMPHKVSAEMNSHLDQPFTEADI 301
Query: 199 ISAIKSFPPTKAPGPDGFPALFYHKYWDIVGLTTISNCLAILN 242
+ A+ PTKAPGPDG P F+ K+W V I+ CL ILN
Sbjct: 302 LEALSQMHPTKAPGPDGLPTAFFQKHWASVSEGVIATCLHILN 344
BLAST of Lcy02g011580 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 77.4 bits (189), Expect = 1.8e-14
Identity = 45/143 (31.47%), Postives = 78/143 (54.55%), Query Frame = 0
Query: 96 EIYWKQRSRENWLNWGDRNTRWFHQKASMGRRRNWICGIEDADGVWRTDTSEVQDIFLKY 155
E +++Q+SR WL GD NTR+FH+ + +N I + D V + ++V+++ + Y
Sbjct: 432 ESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAY 491
Query: 156 FMNIFTSNK----PDMGDVDKIIGFVPRRITAEMNQRLISHFSKEEVISAIKSFPPTKAP 215
+ ++ S+ PD V +I P R + RL + S +E+ +A+ + P KAP
Sbjct: 492 YTHLLGSDSDILTPD--SVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAP 551
Query: 216 GPDGFPALFYHKYWDIVGLTTIS 235
GPD F A F+ + W +V +TI+
Sbjct: 552 GPDSFTAEFFWESWFVVKDSTIA 572
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O00370 | 4.1e-08 | 29.00 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
P14381 | 3.3e-05 | 24.22 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
A0A803P9M1 | 1.2e-39 | 34.55 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A6J1DY29 | 2.7e-39 | 43.00 | uncharacterized protein LOC111025237 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J5TXB8 | 1.8e-38 | 32.44 | Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=... | [more] |
A0A803PI64 | 6.8e-38 | 39.90 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
M5VU98 | 1.5e-37 | 33.33 | Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU... | [more] |
Match Name | E-value | Identity | Description | |
AT1G43760.1 | 1.8e-14 | 31.47 | DNAse I-like superfamily protein | [more] |