Lcy02g011190 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g011190
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CCHC-type domain-containing protein
Location	Chr02: 33785415 .. 33786374 (+)
RNA-Seq Expression	Lcy02g011190
Synteny	Lcy02g011190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCAAAACATTCATCCCAAAGATATGGAATAGAGAAGGGAGAATTAGTTTCAAAACCATGGGAAGAAACACTTTCCTTTGCAAATTTAGAAACAACAGAGACAAAGAATGGGTGGTTAAAGGAGGACCTTGGAACTTTGACAAGGCTTTAATCATCATAGAGGAACCAAAGGGAGAGAGCAGAATATCAAATGCAGAGTTCAGGTATGTTAAATTCTGGATTCATATTCACGACTTACCTATGGTGTGCATGAGCAGGAAACGAGCAGAGGCTCTGGGGAATCTGATAGGCAGCTTCGAAGACGTTGACTGGGATGAAGATGACAGAAGGGGAGAAAACACTCTGAGATTACAAGTAAAGTTAGATATCACAAAGCCGCTGAAAAGAGGGTTGATGATCAGAGTGGGTACAAAAGCCGAAGAAGCATGGGTGAAAATAACGTATGAAAGAATGCCAGATTTTTGTTATAAATGTGGTATCATCGGACATGTCAAAGACGAATGTGAAAATCAGGTCGACCCAGAGGAAGAACATGAATATGGAGATTGGATGAGGAATATGACGACCCCGACAAGCCCACATGTCTACAGAAGCCCAACTTACAGAGCAAATTATGGATGGAACAAAGGAAGAGGCAGGGGCCGAGGCATGAGATCCTATGATTGGCGGCAAACTAAACTGAACTATAGAAATCAGAAAAATGAATATCATAGGTCTACTGCCGGAGAGACTGCCGGAAAACAGGCTGGAGACATCAGGGACGATCGGAGCAAAAGTAGAACAGATGAGACAGGGAAGAAGCTCGAATCCCATAGCAGTACTGTTCCAACGGCTAATAAAGTGTCAGACGACAAGACAAAAGGAAAAGAAAAGGCAGGAATGTCAGAAGAACAGAGGCAAGAGAAGACTAAGGATAAAGGGAAGCAAATACTAAGTAGTCAGACAAGGGACATCTGA

mRNA sequence

ATGTTCAAAACATTCATCCCAAAGATATGGAATAGAGAAGGGAGAATTAGTTTCAAAACCATGGGAAGAAACACTTTCCTTTGCAAATTTAGAAACAACAGAGACAAAGAATGGGTGGTTAAAGGAGGACCTTGGAACTTTGACAAGGCTTTAATCATCATAGAGGAACCAAAGGGAGAGAGCAGAATATCAAATGCAGAGTTCAGGTATGTTAAATTCTGGATTCATATTCACGACTTACCTATGGTGTGCATGAGCAGGAAACGAGCAGAGGCTCTGGGGAATCTGATAGGCAGCTTCGAAGACGTTGACTGGGATGAAGATGACAGAAGGGGAGAAAACACTCTGAGATTACAAGTAAAGTTAGATATCACAAAGCCGCTGAAAAGAGGGTTGATGATCAGAGTGGGTACAAAAGCCGAAGAAGCATGGGTGAAAATAACGTATGAAAGAATGCCAGATTTTTGTTATAAATGTGGTATCATCGGACATGTCAAAGACGAATGTGAAAATCAGGTCGACCCAGAGGAAGAACATGAATATGGAGATTGGATGAGGAATATGACGACCCCGACAAGCCCACATGTCTACAGAAGCCCAACTTACAGAGCAAATTATGGATGGAACAAAGGAAGAGGCAGGGGCCGAGGCATGAGATCCTATGATTGGCGGCAAACTAAACTGAACTATAGAAATCAGAAAAATGAATATCATAGGTCTACTGCCGGAGAGACTGCCGGAAAACAGGCTGGAGACATCAGGGACGATCGGAGCAAAAGTAGAACAGATGAGACAGGGAAGAAGCTCGAATCCCATAGCAGTACTGTTCCAACGGCTAATAAAGTGTCAGACGACAAGACAAAAGGAAAAGAAAAGGCAGGAATGTCAGAAGAACAGAGGCAAGAGAAGACTAAGGATAAAGGGAAGCAAATACTAAGTAGTCAGACAAGGGACATCTGA

Coding sequence (CDS)

ATGTTCAAAACATTCATCCCAAAGATATGGAATAGAGAAGGGAGAATTAGTTTCAAAACCATGGGAAGAAACACTTTCCTTTGCAAATTTAGAAACAACAGAGACAAAGAATGGGTGGTTAAAGGAGGACCTTGGAACTTTGACAAGGCTTTAATCATCATAGAGGAACCAAAGGGAGAGAGCAGAATATCAAATGCAGAGTTCAGGTATGTTAAATTCTGGATTCATATTCACGACTTACCTATGGTGTGCATGAGCAGGAAACGAGCAGAGGCTCTGGGGAATCTGATAGGCAGCTTCGAAGACGTTGACTGGGATGAAGATGACAGAAGGGGAGAAAACACTCTGAGATTACAAGTAAAGTTAGATATCACAAAGCCGCTGAAAAGAGGGTTGATGATCAGAGTGGGTACAAAAGCCGAAGAAGCATGGGTGAAAATAACGTATGAAAGAATGCCAGATTTTTGTTATAAATGTGGTATCATCGGACATGTCAAAGACGAATGTGAAAATCAGGTCGACCCAGAGGAAGAACATGAATATGGAGATTGGATGAGGAATATGACGACCCCGACAAGCCCACATGTCTACAGAAGCCCAACTTACAGAGCAAATTATGGATGGAACAAAGGAAGAGGCAGGGGCCGAGGCATGAGATCCTATGATTGGCGGCAAACTAAACTGAACTATAGAAATCAGAAAAATGAATATCATAGGTCTACTGCCGGAGAGACTGCCGGAAAACAGGCTGGAGACATCAGGGACGATCGGAGCAAAAGTAGAACAGATGAGACAGGGAAGAAGCTCGAATCCCATAGCAGTACTGTTCCAACGGCTAATAAAGTGTCAGACGACAAGACAAAAGGAAAAGAAAAGGCAGGAATGTCAGAAGAACAGAGGCAAGAGAAGACTAAGGATAAAGGGAAGCAAATACTAAGTAGTCAGACAAGGGACATCTGA

Protein sequence

MFKTFIPKIWNREGRISFKTMGRNTFLCKFRNNRDKEWVVKGGPWNFDKALIIIEEPKGESRISNAEFRYVKFWIHIHDLPMVCMSRKRAEALGNLIGSFEDVDWDEDDRRGENTLRLQVKLDITKPLKRGLMIRVGTKAEEAWVKITYERMPDFCYKCGIIGHVKDECENQVDPEEEHEYGDWMRNMTTPTSPHVYRSPTYRANYGWNKGRGRGRGMRSYDWRQTKLNYRNQKNEYHRSTAGETAGKQAGDIRDDRSKSRTDETGKKLESHSSTVPTANKVSDDKTKGKEKAGMSEEQRQEKTKDKGKQILSSQTRDI

Homology

[Close]

BLAST of Lcy02g011190 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 5.7e-37
Identity = 70/195 (35.90%), Postives = 118/195 (60.51%), Query Frame = 0


Query: 2   FKTFIPKIWNREGRISFKTMGRNTFLCKFRNNRDKEWVVKGGPWNFDKALIIIEEPKGES 61
           FK+ I  IW  +  ++ + MG N F  +F+N  D++ +++GGPW FDK L+++ E  G  
Sbjct: 56  FKSTISTIWQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSE 115

Query: 62  RISNAEFRYVKFWIHIHDLPMVCMSRKRAEALGNLIGSFEDVDWDEDDRRGENTLRLQVK 121
           ++++ +FRYV FWI +H+LP+ C++R+    LG L+G  +++D  E        +R++V 
Sbjct: 116 KVTDLQFRYVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVL 175

Query: 122 LDITKPLKRGLMIRVGTKAEEAWVKITYERMPDFCYKCGIIGHVKDEC---ENQVDPEEE 181
           +D+  PLKRGL + +G   +   V I YER+P+FCY CG IGH+  +C     ++     
Sbjct: 176 IDVMNPLKRGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSS 235

Query: 182 HEYGDWMRNMTTPTS 194
            ++G WMR ++   S
Sbjct: 236 FKFGPWMRAVSRTRS 250

[Close]

BLAST of Lcy02g011190 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-36
Identity = 105/305 (34.43%), Postives = 154/305 (50.49%), Query Frame = 0


Query: 10  WNREGRISFKTMGRNTFLCKFRNNRDKEWVVKGGPWNFDKALIIIEEPKGESRISNAEFR 69
           W  E +++ +++G+N FL  F    D   V+K GPW FDKALI++++P     IS  EF 
Sbjct: 65  WKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFN 124

Query: 70  YVKFWIHIHDLPMVCMSRKRAEALGNLIGSFEDVDWDEDDRRGENTLRLQVKLDITKPLK 129
            V FWIH+ DLPM  +++  A  LGN IG+F DVD +E       +LR++V +DITKPL+
Sbjct: 125 RVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLR 184

Query: 130 RGLMIRVGTKAEEAWVKITYERMPDFCYKCGIIGHVKDECE-----NQVDPEEEHEYGDW 189
           RG+ I +       W+ I YER+PDFCY CG+IGH   +C+      Q D     EYG W
Sbjct: 185 RGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPW 244

Query: 190 MRNMTTPTSPHVYR---SPTYRANYGWNKGRGRGRGMRSYDWRQTKLNYRNQKNEYHRST 249
           +R + +       R   SP    + G +    + RG+      +TK     Q N+     
Sbjct: 245 LRFVGSKAGAQKGRKGKSPAREDSCGSSSMNSKERGV-----EETKQQLSEQTNQ--DGF 304

Query: 250 AGETAGKQAGDIRDDRSKSRTDETGKKLESHSSTVPTANKVSDDKTKGKEKAGMSEEQRQ 307
             + A +Q GD     +  R   TG  L   S++   +       ++G  K  MS+   +
Sbjct: 305 QSQAAAEQTGD-----AGGRASATGCALGMESNSWDHSINDFPKSSQGSRKKLMSDVLNK 357

[Close]

BLAST of Lcy02g011190 vs. ExPASy TrEMBL
Match: A0A6P9EGW2 (uncharacterized protein LOC118348645 OS=Juglans regia OX=51240 GN=LOC118348645 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-36
Identity = 83/226 (36.73%), Postives = 122/226 (53.98%), Query Frame = 0


Query: 2   FKTFIPKIWNREGRISFKTMGRNTFLCKFRNNRDKEWVVKGGPWNFDKALIIIEEPKGES 61
           FK  + ++WN EG I+FK +GRN FL +F N+  +  V+ G PW+FD+ LI I+E KG  
Sbjct: 55  FKATMTRLWNGEGGITFKDLGRNKFLLEFHNSTVRTRVLTGRPWSFDRNLICIQECKGRL 114

Query: 62  RISNAEFRYVKFWIHIHDLPMVCMSRKRAEALGNLIGSFEDVDWDEDDRRGENTLRLQVK 121
            + + +F    FW+ + DLP   M+++ +E LG   G    VD DE  R     LR++V 
Sbjct: 115 ALKDIDFSLEPFWLQLQDLPFATMNKRTSEKLGTSAGKVIMVDVDEKGRAWGEVLRVKVM 174

Query: 122 LDITKPLKRGLMIRVGTKAEEAWVKITYERMPDFCYKCGIIGHVKDECENQVDPEEEH-- 181
           +D++KPL RG +I VG     +W+   YE++P FCY CGI+ H    C         H  
Sbjct: 175 IDLSKPLTRGCVINVGD--ARSWIPFKYEKLPSFCYYCGIVLHTHHRCSRHFSDGSTHTK 234

Query: 182 ---EYGDWMRNMTTPTSPHVYRSPTYRANYGWNKGRGRGRGMRSYD 223
              +YG W+R    P +P+ Y++    +N    K  G GR   S D
Sbjct: 235 SPLQYGPWLR-ADPPQNPNHYKT---HSNSPEGKTTGNGRQANSDD 274

[Close]

BLAST of Lcy02g011190 vs. ExPASy TrEMBL
Match: A0A6P9E2G0 (uncharacterized protein LOC118344688 OS=Juglans regia OX=51240 GN=LOC118344688 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.1e-35
Identity = 77/205 (37.56%), Postives = 112/205 (54.63%), Query Frame = 0


Query: 2   FKTFIPKIWNREGRISFKTMGRNTFLCKFRNNRDKEWVVKGGPWNFDKALIIIEEPKGES 61
           FK  + ++WN E  I+FK +GRN FL KF N   +  V+   PW+FD+ LI I+E KG  
Sbjct: 55  FKATMTRLWNGEDVITFKDLGRNKFLLKFHNPIVRTKVLTSRPWSFDRNLICIQECKGSL 114

Query: 62  RISNAEFRYVKFWIHIHDLPMVCMSRKRAEALGNLIGSFEDVDWDEDDRRGENTLRLQVK 121
            + + +F    FW+ +HDLP   M+++  E LG   G    VD DE  R     LR++V 
Sbjct: 115 ALKDLDFSLEPFWLQLHDLPFAAMNKRTGEKLGTSAGKVIMVDVDEKGRSWGGVLRVKVM 174

Query: 122 LDITKPLKRGLMIRVGTKAEEAWVKITYERMPDFCYKCGIIGHVKDECENQVDPEEEH-- 181
           ++++KPL RG +I VG     +W+   YER+P FCY CGI+ H +  C         H  
Sbjct: 175 INLSKPLTRGCVINVGD--ARSWIPFKYERLPSFCYYCGIVLHSQHRCSRHFSDGSTHTE 234

Query: 182 ---EYGDWMRNMTTPTSPHVYRSPT 202
              +YG W+R    P  P+ Y++ T
Sbjct: 235 SPPQYGPWLR-ADPPQKPNHYKTLT 256

[Close]

BLAST of Lcy02g011190 vs. ExPASy TrEMBL
Match: A0A5C7ICE5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_008162 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 9.1e-35
Identity = 84/269 (31.23%), Postives = 142/269 (52.79%), Query Frame = 0


Query: 2   FKTFIPKIWNREGRISFKTMGRNTFLCKFRNNRDKEWVVKGGPWNFDKALIIIEEPKGES 61
           F+T +PKIW  +  +  + +  NTFL  FRN  D+ W++ GGPW FD  L+++E+P G  
Sbjct: 56  FRTVMPKIW--QTTLDVEVVQDNTFLFYFRNQGDRFWILSGGPWTFDNCLLVLEKPSGVR 115

Query: 62  RISNAEFRYVKFWIHIHDLPMVCMSRKRAEALGNLIGSFEDVDWDEDDRRGENTLRLQVK 121
            I +  F  V FW+ I + P++CM+++  E +G+LIG   D+D           +RL+V 
Sbjct: 116 DIISLAFNRVAFWLQIPNAPLLCMTKEMGEFIGHLIGELRDIDVGITGECFGKYMRLKVA 175

Query: 122 LDITKPLKRGLMIRVGTKAEEAWVKITYERMPDFCYKCGIIGHVKDECENQ----VDPEE 181
           +D++KPLKR L + +  K +E+ + + YE++P++C+ CGIIGH   +C  +    +   +
Sbjct: 176 VDVSKPLKRFLRLEL-EKGKESILLLRYEKLPEYCFHCGIIGHSYQDCGQRRGEDIGGSK 235

Query: 182 EHEYGDWMRNMTTP-----TSPHVYRSPTYRANYGWNKGRGRGRGMRSYDWRQTKLNYRN 241
           + EYG WMR    P     T  +  R    ++ +G  +    G   +   WR  +++  +
Sbjct: 236 DFEYGPWMRASDPPGRNNVTGSYRLRGEGSKSGFGGARFHNGGHSRKEESWRSRRVSVNS 295

Query: 242 --QKNEYHRSTAGETAGKQAGDIRDDRSK 260
                E    +A +T    AG + D   K
Sbjct: 296 PVYPTEEREGSAQDTGA--AGAVSDQTVK 319

[Close]

BLAST of Lcy02g011190 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 164.9 bits (416), Expect = 1.2e-36
Identity = 70/195 (35.90%), Postives = 118/195 (60.51%), Query Frame = 0


Query: 2   FKTFIPKIWNREGRISFKTMGRNTFLCKFRNNRDKEWVVKGGPWNFDKALIIIEEPKGES 61
           FK+ I  IW  +  ++ + MG N F  +F+N  D++ +++GGPW FDK L+++ E  G  
Sbjct: 56  FKSTISTIWQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSE 115

Query: 62  RISNAEFRYVKFWIHIHDLPMVCMSRKRAEALGNLIGSFEDVDWDEDDRRGENTLRLQVK 121
           ++++ +FRYV FWI +H+LP+ C++R+    LG L+G  +++D  E        +R++V 
Sbjct: 116 KVTDLQFRYVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVL 175

Query: 122 LDITKPLKRGLMIRVGTKAEEAWVKITYERMPDFCYKCGIIGHVKDEC---ENQVDPEEE 181
           +D+  PLKRGL + +G   +   V I YER+P+FCY CG IGH+  +C     ++     
Sbjct: 176 IDVMNPLKRGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSS 235

Query: 182 HEYGDWMRNMTTPTS 194
            ++G WMR ++   S
Sbjct: 236 FKFGPWMRAVSRTRS 250

[Close]

BLAST of Lcy02g011190 vs. NCBI nr
Match: XP_035546596.1 (uncharacterized protein LOC118348645 [Juglans regia])

HSP 1 Score: 162.5 bits (410), Expect = 5.8e-36
Identity = 83/226 (36.73%), Postives = 122/226 (53.98%), Query Frame = 0


Query: 2   FKTFIPKIWNREGRISFKTMGRNTFLCKFRNNRDKEWVVKGGPWNFDKALIIIEEPKGES 61
           FK  + ++WN EG I+FK +GRN FL +F N+  +  V+ G PW+FD+ LI I+E KG  
Sbjct: 55  FKATMTRLWNGEGGITFKDLGRNKFLLEFHNSTVRTRVLTGRPWSFDRNLICIQECKGRL 114

Query: 62  RISNAEFRYVKFWIHIHDLPMVCMSRKRAEALGNLIGSFEDVDWDEDDRRGENTLRLQVK 121
            + + +F    FW+ + DLP   M+++ +E LG   G    VD DE  R     LR++V 
Sbjct: 115 ALKDIDFSLEPFWLQLQDLPFATMNKRTSEKLGTSAGKVIMVDVDEKGRAWGEVLRVKVM 174

Query: 122 LDITKPLKRGLMIRVGTKAEEAWVKITYERMPDFCYKCGIIGHVKDECENQVDPEEEH-- 181
           +D++KPL RG +I VG     +W+   YE++P FCY CGI+ H    C         H  
Sbjct: 175 IDLSKPLTRGCVINVGD--ARSWIPFKYEKLPSFCYYCGIVLHTHHRCSRHFSDGSTHTK 234

Query: 182 ---EYGDWMRNMTTPTSPHVYRSPTYRANYGWNKGRGRGRGMRSYD 223
              +YG W+R    P +P+ Y++    +N    K  G GR   S D
Sbjct: 235 SPLQYGPWLR-ADPPQNPNHYKT---HSNSPEGKTTGNGRQANSDD 274

[Close]

BLAST of Lcy02g011190 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 162.5 bits (410), Expect = 5.8e-36
Identity = 105/305 (34.43%), Postives = 154/305 (50.49%), Query Frame = 0


Query: 10  WNREGRISFKTMGRNTFLCKFRNNRDKEWVVKGGPWNFDKALIIIEEPKGESRISNAEFR 69
           W  E +++ +++G+N FL  F    D   V+K GPW FDKALI++++P     IS  EF 
Sbjct: 65  WKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFN 124

Query: 70  YVKFWIHIHDLPMVCMSRKRAEALGNLIGSFEDVDWDEDDRRGENTLRLQVKLDITKPLK 129
            V FWIH+ DLPM  +++  A  LGN IG+F DVD +E       +LR++V +DITKPL+
Sbjct: 125 RVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLR 184

Query: 130 RGLMIRVGTKAEEAWVKITYERMPDFCYKCGIIGHVKDECE-----NQVDPEEEHEYGDW 189
           RG+ I +       W+ I YER+PDFCY CG+IGH   +C+      Q D     EYG W
Sbjct: 185 RGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPW 244

Query: 190 MRNMTTPTSPHVYR---SPTYRANYGWNKGRGRGRGMRSYDWRQTKLNYRNQKNEYHRST 249
           +R + +       R   SP    + G +    + RG+      +TK     Q N+     
Sbjct: 245 LRFVGSKAGAQKGRKGKSPAREDSCGSSSMNSKERGV-----EETKQQLSEQTNQ--DGF 304

Query: 250 AGETAGKQAGDIRDDRSKSRTDETGKKLESHSSTVPTANKVSDDKTKGKEKAGMSEEQRQ 307
             + A +Q GD     +  R   TG  L   S++   +       ++G  K  MS+   +
Sbjct: 305 QSQAAAEQTGD-----AGGRASATGCALGMESNSWDHSINDFPKSSQGSRKKLMSDVLNK 357

[Close]

BLAST of Lcy02g011190 vs. NCBI nr
Match: KAF5462052.1 (hypothetical protein F2P56_018092 [Juglans regia])

HSP 1 Score: 162.2 bits (409), Expect = 7.6e-36
Identity = 75/190 (39.47%), Postives = 108/190 (56.84%), Query Frame = 0


Query: 2   FKTFIPKIWNREGRISFKTMGRNTFLCKFRNNRDKEWVVKGGPWNFDKALIIIEEPKGES 61
           FK  + ++WN EG ISFK +GRN FL +F N   +  ++ G PW+FD+ LI I+E KG  
Sbjct: 55  FKATMTRLWNGEGGISFKDLGRNKFLLEFHNPTVRNRLLTGRPWSFDRNLICIQECKGRL 114

Query: 62  RISNAEFRYVKFWIHIHDLPMVCMSRKRAEALGNLIGSFEDVDWDEDDRRGENTLRLQVK 121
            + + +F    FW+ +HDLP   M+++  E LG   G    VD DE  R     LR++V 
Sbjct: 115 ALKDIDFSLEPFWLQLHDLPFATMNKRMGEKLGTSAGKVIMVDVDEKGRVCGGVLRVKVM 174

Query: 122 LDITKPLKRGLMIRVGTKAEEAWVKITYERMPDFCYKCGIIGHVKDECENQVDPEEEH-- 181
           +D++KPL RG +I VG     +W+   YER+P FCY CGI+ H + +C         H  
Sbjct: 175 IDLSKPLTRGCVINVGD--ARSWIPFKYERLPSFCYYCGIVLHTQHKCSRHFSDGSTHTE 234

Query: 182 ---EYGDWMR 187
              +YG W+R
Sbjct: 235 SPLQYGPWLR 242

[Close]

BLAST of Lcy02g011190 vs. NCBI nr
Match: XP_042961334.1 (uncharacterized protein LOC122296019 [Carya illinoinensis])

HSP 1 Score: 159.1 bits (401), Expect = 6.5e-35
Identity = 76/186 (40.86%), Postives = 105/186 (56.45%), Query Frame = 0


Query: 6   IPKIWNREGRISFKTMGRNTFLCKFRNNRDKEWVVKGGPWNFDKALIIIEEPKGESRISN 65
           +PKIWN EGR++FK +GRN FL +F+   DK  V+ G PW+FDK L+ I++ +G   + +
Sbjct: 62  LPKIWNAEGRVAFKEVGRNMFLVEFKTKTDKTRVMNGRPWSFDKCLLCIQDCEGAKSVKD 121

Query: 66  AEFRYVKFWIHIHDLPMVCMSRKRAEALGNLIGSFEDVDWDEDDRRGENTLRLQVKLDIT 125
            +F    FWI  HD+P   MS    E LGN +G    VD +  +      LR++V LDIT
Sbjct: 122 MQFCNEPFWIQCHDMPFAGMSASMGERLGNSLGKVLTVDTNGSETCWGKFLRVKVMLDIT 181

Query: 126 KPLKRGLMIRVGTKAEEAWVKITYERMPDFCYKCGIIGHVKDECE-----NQVDPEEEHE 185
           KPL RG  I +    E+ W+   YER+ +FCY CG I H +  CE      Q       +
Sbjct: 182 KPLARGRFINM--DGEKYWIPFRYERLNNFCYHCGAIKHGEGGCEKLEVGQQAGVSSGKQ 241

Query: 186 YGDWMR 187
           YG W+R
Sbjct: 242 YGAWLR 245

The following BLAST results are available for this feature:

BLAST of Lcy02g011190 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy02g011190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5C7H9Y2	5.7e-37	35.90	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926...	[more]
A0A6J1DU55	2.8e-36	34.43	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6P9EGW2	2.8e-36	36.73	uncharacterized protein LOC118348645 OS=Juglans regia OX=51240 GN=LOC118348645 P...	[more]
A0A6P9E2G0	3.1e-35	37.56	uncharacterized protein LOC118344688 OS=Juglans regia OX=51240 GN=LOC118344688 P...	[more]
A0A5C7ICE5	9.1e-35	31.23	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00816...	[more]

BLAST of Lcy02g011190 vs. NCBI nr


Match Name	E-value	Identity	Description
TXG54013.1	1.2e-36	35.90	hypothetical protein EZV62_019269 [Acer yangbiense]	[more]
XP_035546596.1	5.8e-36	36.73	uncharacterized protein LOC118348645 [Juglans regia]	[more]
XP_022156185.1	5.8e-36	34.43	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
KAF5462052.1	7.6e-36	39.47	hypothetical protein F2P56_018092 [Juglans regia]	[more]
XP_042961334.1	6.5e-35	40.86	uncharacterized protein LOC122296019 [Carya illinoinensis]	[more]

BLAST of Lcy02g011190 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 3..109 e-value: 6.7E-21 score: 74.3
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 122..170 e-value: 5.6E-15 score: 54.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..270
None	No IPR available	PANTHER	PTHR31286:SF62	SUBFAMILY NOT NAMED	coord: 5..308
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 5..308
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 156..171 score: 9.454925

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g011190.1	Lcy02g011190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding