Lcy02g011080 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g011080
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr02: 33583498 .. 33592431 (+)
RNA-Seq Expression	Lcy02g011080
Synteny	Lcy02g011080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATAACCAGGCGGAAACGCCAAAATTGCAATTCGAAACGAACCTATATATTAAACAAAGAAAATCCACGCATTCAAGCCAATTGTGAATTGTGATTGCTATCGCTATTGCTATTCCTATCCTCCCTTCCCAAGAATTAAACTAAACCCAGTAAAGCTTTCAGGTTCCACTTCCTTCACTTCCCTCTTTCTTTGAATCAATCCACAAATTTCTTATCATGAAACTGTAATTTGTAGTAAAGTTATAGCAATTCCCATTAGTTTCCCTGAGGTTTCCATTGCCATGGCATGTTCAGCAGTGCTTCCATTGGCCTTCGCTTCATCTTCCAAGGTATGTAGACCCACTTCTGCTTCATCTTCTTCTATTGAGCAACAGAGTGAAATCAATACAAATACGACTCAGAAATTTCGCTATAGTAGAGCTTCTCCTTCTGTTAGATGGCCCAACCTGAAATTAACCGAGAGTTTTCAGTTGCCGTCTCAAACCCATTTCACTGTTCCTTCTCCTTGGCAGACCCATGTGGTCGATGAATCGGAGGCTTCTGTGAGAACCCAAAATTCTGAGATTGAAGATGAGTTAGAATCTGTGGGAATGGCGAGTGATGAAACTCGAGAGGTTTTAGGGAGGCCTAGCAAAACGAGAGTGAAAAAGATGAACAAGTTAGCACTGAAGAGAGCCAAAGATTGGAGGGAGAGAGTGCAATTTTTGACTGATAGAATTTTAGCATTGAAACAGGATGAATTTGTAGCTGATGTGTTGGATGATAGGAAGGTTCAAATGACACCCACTGACTTTTGTTTTGTAGTGAAGTGGGTGGGGCGTTCGAATTGGCACAGGGCTTTGGAGGTGTATGAGTGGTTGAATTTGAGGCATTGGTATTCACCCAATGCTCGAATGTTGGCTACCATCTTGGCCGTGCTTGGAAAGGCCAATCAAGAAGCGTTGGCTGTAGAAATTTTTACCAGGTCTGAGCCTGCTATTGGCAATACTGTTCAAGTATACAATGCTATGATGGGCGTATATGCTCGGAATGGTCGGTTTGTTCAGGTTCAAGAGTTGCTTGATTTGATGAGGACAAGAGGGTGTGAGCCTGACCTTGTGAGTTTCAACACTTTAATAAATGCCCGGATGAAGTCGGGACCCATGACACCAAATTTATCCCTTCAATTTCTAAATGAGGTTAGGAAATCGGGCATTAGACCCGATATAATAACGTATAATACTTTAATTAGTGCTTGTTCCCGTGAATCGAATCTTGAGGAAGCAATGAAGGTATATAATGATATGGAGAGACATAATTGTCAACCTGATTTATGGACTTACAATGCTATGATATCAGTTTATGGGAGATGTGGGCTGGCCAGCAGAGCTGATCAGCTCTTTAAGGAATTGGAGTCCAAAGGGTTCTTTCCAGATGCAGTGACATATAATTCACTATTATATGCTTTTGCTAGAGAAGGGAATGTAGAGAAGGTAAAGGAAATTTGTGAAGAAATGGTAAATAATGGATTTGGTAAAGATGAGATGACATATAATACAATTATCCACATGTATGGGAAACAGGAGCAGCATGACCTGGCTTTCCAGCTTTACAGGGATATGAAATTGTCAGGCCGAATCCCCGACGAAGTTACATACACTGTTCTTATTGATTCACTTGGAAAATCAAGTAAAATGGAAGAAGCTGCAAACATAATGACCGAGATGTTGGATTCTGGAGTCAAACCCACTTTAAGGACATATAGTGCTTTAATATGTGGGTATGGCAAGGCTGGGAAACCAGTAGAAGCTGAAAAGACATTTGATTGTATGCTTAGGTCGGGGATTAGACCTGATTATTTGGCATACTCGGTTATGATTGATCTCTTTCTTAGGTTCAATGAGACAAAGAAAGCAATGTTGTTGTACAAGGAAATGGTGCGTGATGGTCTAACACCAGATGGTGCCCTCTATGAGGTTATGCTTCGGAACCTTGTGAAAGAAAAAAAATTGGATGACATTGATAAAGTAATAAGAGATATGCAAGAACAATGTGGTTTGAATCCTCAAGTTCTTTCTTCGATTCTTATAAAGGGTGAATGCTATGATCATGCTGCTAAAATGTTGAGATTGGCCCTTGACACTGGTTATGACCTAGACCATGAGAACTTATTATCTATTTTAAGTACATATAGTTTGTCGGGCAGGCACTTGGAAGCTTGTGAATTACTAGAATTTTTGAAAGAGAGGACTTCTAATTCCAATCAGCTGGTAACTGAATCACTGATAGTTGTACTTTGTAAGGCCAAGCAAATAGATGCTGCTCTAGTGGAATATGGTAATACTACTAGAGGGTTTAGTTCATATGGCACAAATTCCCTAGTGTATGAATGTTTGATTCAAGGATGCCAGGAAAAGGAACTCTTTGATATCGCATCTCACATTTTTTCTGACATGATGTTCTATGGTGTCAAAATTTCAGAAAACCTGTACCAAGTCATGATGCTTATGTACTGTAAAACAGGCTATCCTGAAATTGCCCATTATTTGCTTGAACGTGCAGAGCTTGAAGGGGTTGTAATAGATGATGTCTCTACTTATGTAAAAATTATTGAAGCATATGGGGAACTCAAGCTATGGCAGAAAGCTGAAAGTTTGGTTGGAAACCTGAGGCTAAAACTAGCTACCATTGATAGGAAGATTTGGAATGCATTAATACAAGCTTATGCCAAAAGCGGTTGCTACGAAAGAGCAAGGGCTGTTTTTAATACCATGATGCGTGATGGTCCTTCTCCCACCGTGAATTCCATTAATGGTTTATTGCAGGCATTAATTGTTGATAATCGATTGAAGGAACTTTATGTTGTAGTTCAGGAGTTGCAAGATATGGGCTTTAAGATAAGCAAAAGTTCTGTTCTTTTGATGCTTGATGCATTTGCTCGAGATGGAAACATATTTGAGGTGAAGAAAATTTACCATGGAATGAAAGCTGCAGGTTATCTTCCAACAATGCATCTTTATAGGAGTATGATTGAATTATTATGCACAGGAAAACGAGTTAGGGATGTTGAGGCCATGCTATCAGAAATGGAGGAGGCTGGATTTAAACCTGATTTGTCCATATTAAATTCCGTAATCAGGTTGTATGTAGGAGTTGAGGATTTCAGAAATGCTTCTAGAACATACCAGCTAATCCAAGAAACTGGACTTACACCAGATCAGGATACTTATAATTCTTTAATTATAATGTATTGTAGAGATTGTAGACCAGAAGAGGGGTTGTCACTGATGCATGAAATGAAAAGGCGGGGTATGGAGCCTGTGTTGGACACCTATAAAAGTTTGATTTCAGCTCTATCTAAAAGGCAGCTAGTTGAAGAAGCAGAGGAGCTTTTTGAAGAGTTGAGATCCACTGGATGTAAATTAGACCGGTTTTTTTATCATGTAATGATGAAAATGTATAGAAATTCAGGAAATCATTTGAAAGCAGAGCGCTTACTTGTCATGATGAAAGAGACAGGAATAGATCCTACTGTTGCAACAATGCACCTGTTAATGGTTTCCTATGGCAGTTCTGGTCACCCTAAGGAAGCTGAAAAGGTTCTTAATGATCTGAAAGCAACTGGTATGAACCTTGATACATTACCATATAGCTCAGTAATTGATGCCTATCTTAGAAACGGAGATTACAATGGTGGAATCCAGAAACTGATGGGAATGAAGGCAGATGGTATAGAGCCAGACTATAGAATATGGACGTGCTTTATAAGGGCTGCAAGTTTGTCTGAAAGTACAACTGAAGCCATTATCATTTTAAATGCATTGCGAGATACGGGATTTGATCTTCCAATCAGGTACCTACTAATTTTTCTAATGTTAAAGCGAGACAATGTTTCAGTTCTCTTGTAATATGTTGCTGTCAAGTAATTTCCGAAAATTGCCATTTCAAGACACAGCTTCTCTTGTAGGCTTTTAACAGAAAAATCAGGTTCACTGGTTCTGGAGGTTGACCAATATCTAGAGAAACTTGTAGCCATGGAAGATGATGATGCAGCATTTAACTTCGTCAATGCTTTAGAGGATCTGCTGTGGGCATTTGAACTTCGAGCCACTGCATCATGGATTTTCCAATTGGCAATCAAGAGAAATATATTCCGACAGGATATATTCAGGTAAATGCTAATTTGTTCTACTTTTTCTATCAAATTTATTATGCCATTACTAAGTTGTGGGAAATTTGGCTTTTACTTCAAATCTGCCAAGTTATCACCATCCAAGCTACTGAAGTTTGAATTTCCCTGTATATCACTGTGTAGGAAAATAAACCCATAAATTTTCGTGTATGAGAAGATCTAATGATTTATAAATTATCTCAACCTGTACTTTTTACTTATGCTTGGAGGAAAATAGGGAGAAACAGGGTAAATAACTTGAAAAAGGTTGCGCCCACAAGTAATTATGGGACAGAAAGGATATTTTTATATTTTGTCCCAACTTTTACTCTGTCCTTGCGTGCTTAAACTTCACGACTGAGAAAGATCATTGATTTATAAACAAATATAACGCCTCGGGGTGTATTCATCATCAAAAAGTTTCTGAATGAGATTCACACTTTAATAACTTGTGAAAAGTTGTTACAACCTCTTCAACTAGCGGTTCTTATGTAACTGCATGACCCTATTATGGTCAAGCCAAGTGGGCCAAATGATTGGAGTCAGCATGCTATTGTTGGTGGTTTGTGGTGGCTCCCCTGCAAATGATGGATGGATTCTAGGAATTTGTATTACTACTAATGCCTTTTTCGATAATGTACTACTTGTTAAATTGCTCCGGGATATGGAAAAGTGTCATTATGTCAATCGATTAAAACTTTTGCACTTTTGTTGGATTTTGCACTGAGAATCAATGCCTCTTCCAAGGATGGAGTTATGGTGGCATGTGGTGACTTTAGGGGCATTGACCCAAATCGTGGCTGACCTTGTTGAATAGATGAGCGGATTGGAACCCATACTTTATATTATGTTTTTTAGCCTTATTGTAGCCATATTATGAGATTGGAGACAATTTGTTTGTTACTTATATTAAATTGTTCAATTACTTTCTCATGCCCTAGTCTAATAACGCAGGGTAGCTGACAAGGACTGGGGTGCTGATTTTAGAAAGCTGTCTGCTGGTTCAGCTCTTGTTGCTCTGACTTTATGGCTTGACCATATGCAGGCTAGTTCTTTTCCTACGTTGTGCCAAATATTTTCCACATGAAGCTACCTCTACGCTGATTGAAAGTGTTAGCTGAATTACAATTGTGCATATGTTTTACGATATATTAATGTAGTATAGATAGATTATGGTTAGTGTAACAGTATGAACCCATCTAAGTCTCCACATCTACCCATGGCCTTGTCCTATTTATTGTACAAAGTCAAATCTAAGAAGGTAAAATAGAATAAGTAGAGAAGTTCAGAAGTCCAGGGAAAGCTACAAACCTGAAGAATGATGTTAGCCTTTTGAGAGAACTAACTTCCTTTCTACTGTATCCTTATTACCTCATATCCCCCCCCCCCCCCCCCACATTTATTTCTCACTCTCTCCCATGCAAACTGTTCCTTGAAATTTCCGAGTTTGCCCTTCCTTGTAGCTCTTATTAGCGTGCAAAACTGATGATGGTCTATCATTACCCCCTAGGCAGAGAAACATCTCGTCCACAAGTTAGAAAGGGGTGGCTACTTTTGCCCAGAAAATTCAAGCAATGACTCATTGGCCCATTCCTTCTATTGTGTATTATGATGTTTTCTAGGGCACAAGGGTTATTAATTTATCATTGCTGTTCCCTAGCAAATTTTTGGCTCTATTCTTGGCCTCTCACTCAACAACTTAAGTGGACTTTCTCTATTTGAATGAGGCAGCATTGGAGGCGTTCCAACAACCAATGTTTTAAAGGGCAAGAGGCTTACGCCTCGAGGCGAGCCTCGAGTCAAAGCTCTAACTTTTAGCCTTGAGACTTGCGCCTTCTTTGGAGCATAAGAGGCTTACGCCTTTATAAAAACGCATTGAGGCTTAAAGTCTCTACACCTCATATAATGGTTAGAAGAATAGTATTAATTTCTCCATTCTTTAAAAATATAAAGGTTTAAGCTGTAACAATTTGAAATATTACTACTTTTACCACTTAGGCTTTAAAAACATTGAAAATAAAAATTTATAGAATAGGTAAATCCTATAAGTGATAATAGTATTGATGGTAAAGATATACTTGTAGGATGTTTGTTCAAGTAGCAATTCAAGTGGGAGACTTTTTTTTTTTTTTTATACTTTTATATAAGTATTATGTTTAGCATTACTTGTTCACACAAATTTAGGATTTGCATAATGTTTTAAATTAAAATTGAGGCTTACGCCTCATACCGCCTCGAGACTTGTGCCTCGCCTCTTCAAGAGGAAAAGCCTCAAGACCGCCTTTAGCCTTTTAAAACATTGCCAACAACTAAAATGACCATGGGGACATTCAAGTCTGAGCATTGGCTGATTTTACTTGCCATTCACCATAGACGTGGTTGCTTCTGTTCTGCCACTAGGGTGGAGTCATTTTAATGCAGTCTCAGTGCCTAATATCCCACTTTATACAAAGCTCCATCACATTTTTCCCACCTTACACTCATTTATGAAAGAGAATTGATGGTGATACTCAAAGTACACGACTAAATTTATCTGTTAACCTTTTTTTAACCACTATGTTTGGACAGCGGTCAAACTTTGAAGCTGGATTACATGTCTTACTCCTTTATCAATCTATAATATCTTCTGAACTCAAGAAATATATATATATCTATAATGTCTGGTATATTGTTGCAGGATGCATCCTTGCAAGGTTTCCCAGAATCTCCAAAATCAGTTGTTCTGATCACTGGAATGGCAGAGTATAACATGGTTTCACTCAATAGCACACTAAAAGTATGCCTTTGGGAGATGGGTTCTCCTTTCCTGCCTTGTAGAACACGAAGCGGTCTCCTTATAGCAAAAGCTCATTCTCTAAGGATGTGGCTAAAGGATTCCTCTTTCTGTTTGGACCTTGAGTTGAAAGATGCCCCAGCTCTCCCAGAACTAAATTCAATGAAGCTAATTGATGGATGTTTTATAAGACGAGGTCTTGTTTCTGCATTCAAGGACATAACTGAAAGACTGGGATTTGTGAGGCCCAAGAAATTCTCTAGGTTGGCTTTGCTTCCTGATGAAAAGAGGGACAAGGTCATTAAAGCTGATTTAGAAGGTAGGAAAGAGAAGCTTGAAAAAGTGAAAAAAATGATCAAGTCTGGGAAGGTGAGGAGGATAACTAAGATAAAAAGGAGGACATACTATCGTAGCCTCGATGCTATGAAGAAAAATTAGAAAATTTTGGATGGTATAGCTTATGGTAATCAAGTTATTCCTCTTTTGGCCCCTTATCACCTTTGGCCATGAAGGCGGTTTCAACCGTAACTTTGAAATTCGAACAATGTTTGTTCACTCTCTACAGCTTGGCATTCATGTAAGACTTGTTCTATACCCCTCTTCGCATACAATTGATCCACTTGCAGGGCCGAGAGTTGGAAAAACAAAAAGGTCTGAATTTTCTTTATTTCTTGTATTTTAAATTAATAGAGTAACCATTATCTCAAGCAGAAGATAACTTCACATTTTTCCTTGGTTGAATTAAGGTAGAACAATGCTCGACTATCATTTTTCCTGTCAAATATCTGGAGTGAGATTCTCCTCAAGGAAGAATATTGGCAAGAATTCGATAACCCTTGCGAAAGCGACAACTTGGAGTTTAGACTTCAACTCCATATGTAGTTTGTCGGTGCTTTTTCTACAATGAGGTAGTCCCTTTAAATATATGTTTGTCTGTGCTCTAACTGGATTCTCATTTATTTATGGTATTTTGGCACTAGTTGGTATAGAACTATCATCTCCTCTTCCAACTGGAATCTTTTCTAGTGAAGCTTCAGTTGCCTCATCTATTTTATTTGATTCCCATTTAGTCTGGCGTTTGATGTTTTCAATTTTTTGGGTATTTTCTTCTGTGGATGAATCTCAATGGTTTCTTGATGACTGCCAGAAAGTTGCAGGCATAAACAACTTTTCTTGTAGTATGAGATTTTGTATTATAGTTGTCTAAGTTCTAAGCATGGAGCAGATGTCCTAAAAAATCAGCAGAAACAGCTTATCGTGGAACTCTCTCTTTAAAGTTAGGATAGAATTATCTTAACTTTTATTGAGGTTCCCCTCCAACTTGGTTAAATTTTATAGAATCTGCATCATTCTCATCTATCACTATTTTTGTGTAATATTGATTTTTTCCCCCACCTAGCGATTCTCTTATATGCCATTTTTTTCCATTAAGGTACTTCAAACTGATCATGAAGCAAAAAATTAGTAAAAGTACATCCATAGTGATGAAATTATTCAAACAAACGACGAATCAGAGTCTGGGCAGGTTCGCTTGTTGATCTGTCCGTTCTGTATTGGATTTGCTCAGGTGCAGAGATTCATTCACTTCATCTCTGAGATTTCTTGTTCTGTTTCCCTGTAAACTTAATTCTCCCTTAACACATTTTACTACAAGTTTGTGCTCTTTGGAAGCCATTGAAGATATGGTGATCATTTGCTTAAGTCTGCCATTTTTACAGGTAATTCATCAACTTAACAAGCTTAAACCTTCTGGCAGCAACTATTATTTATGGTCCCGGATGAATTTAAGCTGTTGTATGGATGAAGATGAACATGCGGTAGCTGCAAGGGTAGTAATTTATTATGTAGCATCAATAATGAATAGAGTATGCCAGATTCAATTGGTTTGGAATGGATTGGATTGCAATAAACTTGTATCTGATCTCATATCTAATTCTGTTTGAGATTCTTTGTTCATGCACTTAGTGAAGTATTTTTAAAGTATGTTTAATAGATTAACTTTTTTTTTA

mRNA sequence

CTTATAACCAGGCGGAAACGCCAAAATTGCAATTCGAAACGAACCTATATATTAAACAAAGAAAATCCACGCATTCAAGCCAATTGTGAATTGTGATTGCTATCGCTATTGCTATTCCTATCCTCCCTTCCCAAGAATTAAACTAAACCCAGTAAAGCTTTCAGGTTCCACTTCCTTCACTTCCCTCTTTCTTTGAATCAATCCACAAATTTCTTATCATGAAACTGTAATTTGTAGTAAAGTTATAGCAATTCCCATTAGTTTCCCTGAGGTTTCCATTGCCATGGCATGTTCAGCAGTGCTTCCATTGGCCTTCGCTTCATCTTCCAAGGTATGTAGACCCACTTCTGCTTCATCTTCTTCTATTGAGCAACAGAGTGAAATCAATACAAATACGACTCAGAAATTTCGCTATAGTAGAGCTTCTCCTTCTGTTAGATGGCCCAACCTGAAATTAACCGAGAGTTTTCAGTTGCCGTCTCAAACCCATTTCACTGTTCCTTCTCCTTGGCAGACCCATGTGGTCGATGAATCGGAGGCTTCTGTGAGAACCCAAAATTCTGAGATTGAAGATGAGTTAGAATCTGTGGGAATGGCGAGTGATGAAACTCGAGAGGTTTTAGGGAGGCCTAGCAAAACGAGAGTGAAAAAGATGAACAAGTTAGCACTGAAGAGAGCCAAAGATTGGAGGGAGAGAGTGCAATTTTTGACTGATAGAATTTTAGCATTGAAACAGGATGAATTTGTAGCTGATGTGTTGGATGATAGGAAGGTTCAAATGACACCCACTGACTTTTGTTTTGTAGTGAAGTGGGTGGGGCGTTCGAATTGGCACAGGGCTTTGGAGGTGTATGAGTGGTTGAATTTGAGGCATTGGTATTCACCCAATGCTCGAATGTTGGCTACCATCTTGGCCGTGCTTGGAAAGGCCAATCAAGAAGCGTTGGCTGTAGAAATTTTTACCAGGTCTGAGCCTGCTATTGGCAATACTGTTCAAGTATACAATGCTATGATGGGCGTATATGCTCGGAATGGTCGGTTTGTTCAGGTTCAAGAGTTGCTTGATTTGATGAGGACAAGAGGGTGTGAGCCTGACCTTGTGAGTTTCAACACTTTAATAAATGCCCGGATGAAGTCGGGACCCATGACACCAAATTTATCCCTTCAATTTCTAAATGAGGTTAGGAAATCGGGCATTAGACCCGATATAATAACGTATAATACTTTAATTAGTGCTTGTTCCCGTGAATCGAATCTTGAGGAAGCAATGAAGGTATATAATGATATGGAGAGACATAATTGTCAACCTGATTTATGGACTTACAATGCTATGATATCAGTTTATGGGAGATGTGGGCTGGCCAGCAGAGCTGATCAGCTCTTTAAGGAATTGGAGTCCAAAGGGTTCTTTCCAGATGCAGTGACATATAATTCACTATTATATGCTTTTGCTAGAGAAGGGAATGTAGAGAAGGTAAAGGAAATTTGTGAAGAAATGGTAAATAATGGATTTGGTAAAGATGAGATGACATATAATACAATTATCCACATGTATGGGAAACAGGAGCAGCATGACCTGGCTTTCCAGCTTTACAGGGATATGAAATTGTCAGGCCGAATCCCCGACGAAGTTACATACACTGTTCTTATTGATTCACTTGGAAAATCAAGTAAAATGGAAGAAGCTGCAAACATAATGACCGAGATGTTGGATTCTGGAGTCAAACCCACTTTAAGGACATATAGTGCTTTAATATGTGGGTATGGCAAGGCTGGGAAACCAGTAGAAGCTGAAAAGACATTTGATTGTATGCTTAGGTCGGGGATTAGACCTGATTATTTGGCATACTCGGTTATGATTGATCTCTTTCTTAGGTTCAATGAGACAAAGAAAGCAATGTTGTTGTACAAGGAAATGGTGCGTGATGGTCTAACACCAGATGGTGCCCTCTATGAGGTTATGCTTCGGAACCTTGTGAAAGAAAAAAAATTGGATGACATTGATAAAGTAATAAGAGATATGCAAGAACAATGTGGTTTGAATCCTCAAGTTCTTTCTTCGATTCTTATAAAGGGTGAATGCTATGATCATGCTGCTAAAATGTTGAGATTGGCCCTTGACACTGGTTATGACCTAGACCATGAGAACTTATTATCTATTTTAAGTACATATAGTTTGTCGGGCAGGCACTTGGAAGCTTGTGAATTACTAGAATTTTTGAAAGAGAGGACTTCTAATTCCAATCAGCTGGTAACTGAATCACTGATAGTTGTACTTTGTAAGGCCAAGCAAATAGATGCTGCTCTAGTGGAATATGGTAATACTACTAGAGGGTTTAGTTCATATGGCACAAATTCCCTAGTGTATGAATGTTTGATTCAAGGATGCCAGGAAAAGGAACTCTTTGATATCGCATCTCACATTTTTTCTGACATGATGTTCTATGGTGTCAAAATTTCAGAAAACCTGTACCAAGTCATGATGCTTATGTACTGTAAAACAGGCTATCCTGAAATTGCCCATTATTTGCTTGAACGTGCAGAGCTTGAAGGGGTTGTAATAGATGATGTCTCTACTTATGTAAAAATTATTGAAGCATATGGGGAACTCAAGCTATGGCAGAAAGCTGAAAGTTTGGTTGGAAACCTGAGGCTAAAACTAGCTACCATTGATAGGAAGATTTGGAATGCATTAATACAAGCTTATGCCAAAAGCGGTTGCTACGAAAGAGCAAGGGCTGTTTTTAATACCATGATGCGTGATGGTCCTTCTCCCACCGTGAATTCCATTAATGGTTTATTGCAGGCATTAATTGTTGATAATCGATTGAAGGAACTTTATGTTGTAGTTCAGGAGTTGCAAGATATGGGCTTTAAGATAAGCAAAAGTTCTGTTCTTTTGATGCTTGATGCATTTGCTCGAGATGGAAACATATTTGAGGTGAAGAAAATTTACCATGGAATGAAAGCTGCAGGTTATCTTCCAACAATGCATCTTTATAGGAGTATGATTGAATTATTATGCACAGGAAAACGAGTTAGGGATGTTGAGGCCATGCTATCAGAAATGGAGGAGGCTGGATTTAAACCTGATTTGTCCATATTAAATTCCGTAATCAGGTTGTATGTAGGAGTTGAGGATTTCAGAAATGCTTCTAGAACATACCAGCTAATCCAAGAAACTGGACTTACACCAGATCAGGATACTTATAATTCTTTAATTATAATGTATTGTAGAGATTGTAGACCAGAAGAGGGGTTGTCACTGATGCATGAAATGAAAAGGCGGGGTATGGAGCCTGTGTTGGACACCTATAAAAGTTTGATTTCAGCTCTATCTAAAAGGCAGCTAGTTGAAGAAGCAGAGGAGCTTTTTGAAGAGTTGAGATCCACTGGATGTAAATTAGACCGGTTTTTTTATCATGTAATGATGAAAATGTATAGAAATTCAGGAAATCATTTGAAAGCAGAGCGCTTACTTGTCATGATGAAAGAGACAGGAATAGATCCTACTGTTGCAACAATGCACCTGTTAATGGTTTCCTATGGCAGTTCTGGTCACCCTAAGGAAGCTGAAAAGGTTCTTAATGATCTGAAAGCAACTGGTATGAACCTTGATACATTACCATATAGCTCAGTAATTGATGCCTATCTTAGAAACGGAGATTACAATGGTGGAATCCAGAAACTGATGGGAATGAAGGCAGATGGTATAGAGCCAGACTATAGAATATGGACGTGCTTTATAAGGGCTGCAAGTTTGTCTGAAAGTACAACTGAAGCCATTATCATTTTAAATGCATTGCGAGATACGGGATTTGATCTTCCAATCAGGCTTTTAACAGAAAAATCAGGTTCACTGGTTCTGGAGGTTGACCAATATCTAGAGAAACTTGTAGCCATGGAAGATGATGATGCAGCATTTAACTTCGTCAATGCTTTAGAGGATCTGCTGTGGGCATTTGAACTTCGAGCCACTGCATCATGGATTTTCCAATTGGCAATCAAGAGAAATATATTCCGACAGGATATATTCAGGGTAGCTGACAAGGACTGGGGTGCTGATTTTAGAAAGCTGTCTGCTGGTTCAGCTCTTGTTGCTCTGACTTTATGGCTTGACCATATGCAGGATGCATCCTTGCAAGGTTTCCCAGAATCTCCAAAATCAGTTGTTCTGATCACTGGAATGGCAGAGTATAACATGGTTTCACTCAATAGCACACTAAAAGTATGCCTTTGGGAGATGGGTTCTCCTTTCCTGCCTTGTAGAACACGAAGCGGTCTCCTTATAGCAAAAGCTCATTCTCTAAGGATGTGGCTAAAGGATTCCTCTTTCTGTTTGGACCTTGAGTTGAAAGATGCCCCAGCTCTCCCAGAACTAAATTCAATGAAGCTAATTGATGGATGTTTTATAAGACGAGGTCTTGTTTCTGCATTCAAGGACATAACTGAAAGACTGGGATTTGTGAGGCCCAAGAAATTCTCTAGGTTGGCTTTGCTTCCTGATGAAAAGAGGGACAAGGTCATTAAAGCTGATTTAGAAGGTAGGAAAGAGAAGCTTGAAAAAGTGAAAAAAATGATCAAGTCTGGGAAGGTGAGGAGGATAACTAAGATAAAAAGGAGGACATACTATCGTAGCCTCGATGCTATGAAGAAAAATTAGAAAATTTTGGATGGTATAGCTTATGGTAATCAAGTTATTCCTCTTTTGGCCCCTTATCACCTTTGGCCATGAAGGCGGTTTCAACCGTAACTTTGAAATTCGAACAATGTTTGTTCACTCTCTACAGCTTGGCATTCATGTAAGACTTGTTCTATACCCCTCTTCGCATACAATTGATCCACTTGCAGGGCCGAGAGTTGGAAAAACAAAAAGGTAGAACAATGCTCGACTATCATTTTTCCTGTCAAATATCTGGAGTGAGATTCTCCTCAAGGAAGAATATTGGCAAGAATTCGATAACCCTTGCGAAAGCGACAACTTGGAGTTTAGACTTCAACTCCATATGTAGTTTGTCGGTGCTTTTTCTACAATGAGGTACTTCAAACTGATCATGAAGCAAAAAATTAGTAAAAGTACATCCATAGTGATGAAATTATTCAAACAAACGACGAATCAGAGTCTGGGCAGGTTCGCTTGTTGATCTGTCCGTTCTGTATTGGATTTGCTCAGGTAATTCATCAACTTAACAAGCTTAAACCTTCTGGCAGCAACTATTATTTATGGTCCCGGATGAATTTAAGCTGTTGTATGGATGAAGATGAACATGCGGTAGCTGCAAGGGTAGTAATTTATTATGTAGCATCAATAATGAATAGAGTATGCCAGATTCAATTGGTTTGGAATGGATTGGATTGCAATAAACTTGTATCTGATCTCATATCTAATTCTGTTTGAGATTCTTTGTTCATGCACTTAGTGAAGTATTTTTAAAGTATGTTTAATAGATTAACTTTTTTTTTA

Coding sequence (CDS)

ATGGCATGTTCAGCAGTGCTTCCATTGGCCTTCGCTTCATCTTCCAAGGTATGTAGACCCACTTCTGCTTCATCTTCTTCTATTGAGCAACAGAGTGAAATCAATACAAATACGACTCAGAAATTTCGCTATAGTAGAGCTTCTCCTTCTGTTAGATGGCCCAACCTGAAATTAACCGAGAGTTTTCAGTTGCCGTCTCAAACCCATTTCACTGTTCCTTCTCCTTGGCAGACCCATGTGGTCGATGAATCGGAGGCTTCTGTGAGAACCCAAAATTCTGAGATTGAAGATGAGTTAGAATCTGTGGGAATGGCGAGTGATGAAACTCGAGAGGTTTTAGGGAGGCCTAGCAAAACGAGAGTGAAAAAGATGAACAAGTTAGCACTGAAGAGAGCCAAAGATTGGAGGGAGAGAGTGCAATTTTTGACTGATAGAATTTTAGCATTGAAACAGGATGAATTTGTAGCTGATGTGTTGGATGATAGGAAGGTTCAAATGACACCCACTGACTTTTGTTTTGTAGTGAAGTGGGTGGGGCGTTCGAATTGGCACAGGGCTTTGGAGGTGTATGAGTGGTTGAATTTGAGGCATTGGTATTCACCCAATGCTCGAATGTTGGCTACCATCTTGGCCGTGCTTGGAAAGGCCAATCAAGAAGCGTTGGCTGTAGAAATTTTTACCAGGTCTGAGCCTGCTATTGGCAATACTGTTCAAGTATACAATGCTATGATGGGCGTATATGCTCGGAATGGTCGGTTTGTTCAGGTTCAAGAGTTGCTTGATTTGATGAGGACAAGAGGGTGTGAGCCTGACCTTGTGAGTTTCAACACTTTAATAAATGCCCGGATGAAGTCGGGACCCATGACACCAAATTTATCCCTTCAATTTCTAAATGAGGTTAGGAAATCGGGCATTAGACCCGATATAATAACGTATAATACTTTAATTAGTGCTTGTTCCCGTGAATCGAATCTTGAGGAAGCAATGAAGGTATATAATGATATGGAGAGACATAATTGTCAACCTGATTTATGGACTTACAATGCTATGATATCAGTTTATGGGAGATGTGGGCTGGCCAGCAGAGCTGATCAGCTCTTTAAGGAATTGGAGTCCAAAGGGTTCTTTCCAGATGCAGTGACATATAATTCACTATTATATGCTTTTGCTAGAGAAGGGAATGTAGAGAAGGTAAAGGAAATTTGTGAAGAAATGGTAAATAATGGATTTGGTAAAGATGAGATGACATATAATACAATTATCCACATGTATGGGAAACAGGAGCAGCATGACCTGGCTTTCCAGCTTTACAGGGATATGAAATTGTCAGGCCGAATCCCCGACGAAGTTACATACACTGTTCTTATTGATTCACTTGGAAAATCAAGTAAAATGGAAGAAGCTGCAAACATAATGACCGAGATGTTGGATTCTGGAGTCAAACCCACTTTAAGGACATATAGTGCTTTAATATGTGGGTATGGCAAGGCTGGGAAACCAGTAGAAGCTGAAAAGACATTTGATTGTATGCTTAGGTCGGGGATTAGACCTGATTATTTGGCATACTCGGTTATGATTGATCTCTTTCTTAGGTTCAATGAGACAAAGAAAGCAATGTTGTTGTACAAGGAAATGGTGCGTGATGGTCTAACACCAGATGGTGCCCTCTATGAGGTTATGCTTCGGAACCTTGTGAAAGAAAAAAAATTGGATGACATTGATAAAGTAATAAGAGATATGCAAGAACAATGTGGTTTGAATCCTCAAGTTCTTTCTTCGATTCTTATAAAGGGTGAATGCTATGATCATGCTGCTAAAATGTTGAGATTGGCCCTTGACACTGGTTATGACCTAGACCATGAGAACTTATTATCTATTTTAAGTACATATAGTTTGTCGGGCAGGCACTTGGAAGCTTGTGAATTACTAGAATTTTTGAAAGAGAGGACTTCTAATTCCAATCAGCTGGTAACTGAATCACTGATAGTTGTACTTTGTAAGGCCAAGCAAATAGATGCTGCTCTAGTGGAATATGGTAATACTACTAGAGGGTTTAGTTCATATGGCACAAATTCCCTAGTGTATGAATGTTTGATTCAAGGATGCCAGGAAAAGGAACTCTTTGATATCGCATCTCACATTTTTTCTGACATGATGTTCTATGGTGTCAAAATTTCAGAAAACCTGTACCAAGTCATGATGCTTATGTACTGTAAAACAGGCTATCCTGAAATTGCCCATTATTTGCTTGAACGTGCAGAGCTTGAAGGGGTTGTAATAGATGATGTCTCTACTTATGTAAAAATTATTGAAGCATATGGGGAACTCAAGCTATGGCAGAAAGCTGAAAGTTTGGTTGGAAACCTGAGGCTAAAACTAGCTACCATTGATAGGAAGATTTGGAATGCATTAATACAAGCTTATGCCAAAAGCGGTTGCTACGAAAGAGCAAGGGCTGTTTTTAATACCATGATGCGTGATGGTCCTTCTCCCACCGTGAATTCCATTAATGGTTTATTGCAGGCATTAATTGTTGATAATCGATTGAAGGAACTTTATGTTGTAGTTCAGGAGTTGCAAGATATGGGCTTTAAGATAAGCAAAAGTTCTGTTCTTTTGATGCTTGATGCATTTGCTCGAGATGGAAACATATTTGAGGTGAAGAAAATTTACCATGGAATGAAAGCTGCAGGTTATCTTCCAACAATGCATCTTTATAGGAGTATGATTGAATTATTATGCACAGGAAAACGAGTTAGGGATGTTGAGGCCATGCTATCAGAAATGGAGGAGGCTGGATTTAAACCTGATTTGTCCATATTAAATTCCGTAATCAGGTTGTATGTAGGAGTTGAGGATTTCAGAAATGCTTCTAGAACATACCAGCTAATCCAAGAAACTGGACTTACACCAGATCAGGATACTTATAATTCTTTAATTATAATGTATTGTAGAGATTGTAGACCAGAAGAGGGGTTGTCACTGATGCATGAAATGAAAAGGCGGGGTATGGAGCCTGTGTTGGACACCTATAAAAGTTTGATTTCAGCTCTATCTAAAAGGCAGCTAGTTGAAGAAGCAGAGGAGCTTTTTGAAGAGTTGAGATCCACTGGATGTAAATTAGACCGGTTTTTTTATCATGTAATGATGAAAATGTATAGAAATTCAGGAAATCATTTGAAAGCAGAGCGCTTACTTGTCATGATGAAAGAGACAGGAATAGATCCTACTGTTGCAACAATGCACCTGTTAATGGTTTCCTATGGCAGTTCTGGTCACCCTAAGGAAGCTGAAAAGGTTCTTAATGATCTGAAAGCAACTGGTATGAACCTTGATACATTACCATATAGCTCAGTAATTGATGCCTATCTTAGAAACGGAGATTACAATGGTGGAATCCAGAAACTGATGGGAATGAAGGCAGATGGTATAGAGCCAGACTATAGAATATGGACGTGCTTTATAAGGGCTGCAAGTTTGTCTGAAAGTACAACTGAAGCCATTATCATTTTAAATGCATTGCGAGATACGGGATTTGATCTTCCAATCAGGCTTTTAACAGAAAAATCAGGTTCACTGGTTCTGGAGGTTGACCAATATCTAGAGAAACTTGTAGCCATGGAAGATGATGATGCAGCATTTAACTTCGTCAATGCTTTAGAGGATCTGCTGTGGGCATTTGAACTTCGAGCCACTGCATCATGGATTTTCCAATTGGCAATCAAGAGAAATATATTCCGACAGGATATATTCAGGGTAGCTGACAAGGACTGGGGTGCTGATTTTAGAAAGCTGTCTGCTGGTTCAGCTCTTGTTGCTCTGACTTTATGGCTTGACCATATGCAGGATGCATCCTTGCAAGGTTTCCCAGAATCTCCAAAATCAGTTGTTCTGATCACTGGAATGGCAGAGTATAACATGGTTTCACTCAATAGCACACTAAAAGTATGCCTTTGGGAGATGGGTTCTCCTTTCCTGCCTTGTAGAACACGAAGCGGTCTCCTTATAGCAAAAGCTCATTCTCTAAGGATGTGGCTAAAGGATTCCTCTTTCTGTTTGGACCTTGAGTTGAAAGATGCCCCAGCTCTCCCAGAACTAAATTCAATGAAGCTAATTGATGGATGTTTTATAAGACGAGGTCTTGTTTCTGCATTCAAGGACATAACTGAAAGACTGGGATTTGTGAGGCCCAAGAAATTCTCTAGGTTGGCTTTGCTTCCTGATGAAAAGAGGGACAAGGTCATTAAAGCTGATTTAGAAGGTAGGAAAGAGAAGCTTGAAAAAGTGAAAAAAATGATCAAGTCTGGGAAGGTGAGGAGGATAACTAAGATAAAAAGGAGGACATACTATCGTAGCCTCGATGCTATGAAGAAAAATTAG

Protein sequence

MACSAVLPLAFASSSKVCRPTSASSSSIEQQSEINTNTTQKFRYSRASPSVRWPNLKLTESFQLPSQTHFTVPSPWQTHVVDESEASVRTQNSEIEDELESVGMASDETREVLGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCFVVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAIGNTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSLQFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVYGRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSILIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTSNSNQLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIASHIFSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIEAYGELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTVNSINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHGMKAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGVEDFRNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSLISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKETGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDAYLRNGDYNGGIQKLMGMKADGIEPDYRIWTCFIRAASLSESTTEAIIILNALRDTGFDLPIRLLTEKSGSLVLEVDQYLEKLVAMEDDDAAFNFVNALEDLLWAFELRATASWIFQLAIKRNIFRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGMAEYNMVSLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPELNSMKLIDGCFIRRGLVSAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIKSGKVRRITKIKRRTYYRSLDAMKKN

Homology

[Close]

BLAST of Lcy02g011080 vs. ExPASy Swiss-Prot
Match: Q5G1S8 (Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB1270 PE=2 SV=2)

HSP 1 Score: 1808.5 bits (4683), Expect = 0.0e+00
Identity = 926/1431 (64.71%), Postives = 1126/1431 (78.69%), Query Frame = 0


Query: 29   EQQSEIN--TNTTQKFRYSRASPSVRWPNLKLTESF-QLPSQTHFTVPSPWQTHVVDESE 88
            ++Q+ I+  T+++QKF YSRASP+VRWP+L L E +   PSQT  +  SP          
Sbjct: 25   DEQANISSTTSSSQKFTYSRASPAVRWPHLNLREIYDSTPSQTLSSPVSP---------- 84

Query: 89   ASVRTQNSEIEDELES--VGMASDETREVLGRPSKTRVKKMNKLALKRAKDWRERVQFLT 148
             +    + ++ D + S       DET     R    RVKKMNK+AL +AKDWRERV+FLT
Sbjct: 85   IAGTPDSGDVVDSIASREEQKTKDETAVATRR---RRVKKMNKVALIKAKDWRERVKFLT 144

Query: 149  DRILALKQDEFVADVLDDRKVQMTPTDFCFVVKWVGRSNWHRALEVYEWLNLRHWYSPNA 208
            D+IL+LK ++FVAD+LD R VQMTPTD+CFVVK VG+ +W RALEV+EWLNLRHW+SPNA
Sbjct: 145  DKILSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNA 204

Query: 209  RMLATILAVLGKANQEALAVEIFTRSEPAIGNTVQVYNAMMGVYARNGRFVQVQELLDLM 268
            RM+A IL VLG+ NQE+LAVEIFTR+EP +G+ VQVYNAMMGVY+R+G+F + QEL+D M
Sbjct: 205  RMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAM 264

Query: 269  RTRGCEPDLVSFNTLINARMKSGPMTPNLSLQFLNEVRKSGIRPDIITYNTLISACSRES 328
            R RGC PDL+SFNTLINAR+KSG +TPNL+++ L+ VR SG+RPD ITYNTL+SACSR+S
Sbjct: 265  RQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDS 324

Query: 329  NLEEAMKVYNDMERHNCQPDLWTYNAMISVYGRCGLASRADQLFKELESKGFFPDAVTYN 388
            NL+ A+KV+ DME H CQPDLWTYNAMISVYGRCGLA+ A++LF ELE KGFFPDAVTYN
Sbjct: 325  NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYN 384

Query: 389  SLLYAFAREGNVEKVKEICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMK-L 448
            SLLYAFARE N EKVKE+ ++M   GFGKDEMTYNTIIHMYGKQ Q DLA QLY+DMK L
Sbjct: 385  SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 444

Query: 449  SGRIPDEVTYTVLIDSLGKSSKMEEAANIMTEMLDSGVKPTLRTYSALICGYGKAGKPVE 508
            SGR PD +TYTVLIDSLGK+++  EAA +M+EMLD G+KPTL+TYSALICGY KAGK  E
Sbjct: 445  SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 504

Query: 509  AEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLR 568
            AE TF CMLRSG +PD LAYSVM+D+ LR NET+KA  LY++M+ DG TP   LYE+M+ 
Sbjct: 505  AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 564

Query: 569  NLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSILIKGECYDHAAKMLRLALDTGYDLDHEN 628
             L+KE + DDI K IRDM+E CG+NP  +SS+L+KGEC+D AA+ L++A+  GY+L+++ 
Sbjct: 565  GLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDT 624

Query: 629  LLSILSTYSLSGRHLEACELLEFLKERTSNSNQLVTESLIVVLCKAKQIDAALVEYGNTT 688
            LLSIL +YS SGRH EA ELLEFLKE  S S +L+TE+LIV+ CK   + AAL EY    
Sbjct: 625  LLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADP 684

Query: 689  RGFSSYGTNSLVYECLIQGCQEKELFDIASHIFSDMMFYGVKISENLYQVMMLMYCKTGY 748
                    +S +YE L+  C   E +  AS +FSD+   G + SE++ + M+++YCK G+
Sbjct: 685  CVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGF 744

Query: 749  PEIAHYLLERAELEGVVIDDVSTYVKIIEAYGELKLWQKAESLVGNLRLKLATIDRKIWN 808
            PE AH ++ +AE +G        Y  IIEAYG+ KLWQKAES+VGNLR    T D K WN
Sbjct: 745  PETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 804

Query: 809  ALIQAYAKSGCYERARAVFNTMMRDGPSPTVNSINGLLQALIVDNRLKELYVVVQELQDM 868
            +L+ AYA+ GCYERARA+FNTMMRDGPSPTV SIN LL AL VD RL+ELYVVV+ELQDM
Sbjct: 805  SLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 864

Query: 869  GFKISKSSVLLMLDAFARDGNIFEVKKIYHGMKAAGYLPTMHLYRSMIELLCTGKRVRDV 928
            GFKISKSS+LLMLDAFAR GNIFEVKKIY  MKAAGYLPT+ LYR MIELLC GKRVRD 
Sbjct: 865  GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 924

Query: 929  EAMLSEMEEAGFKPDLSILNSVIRLYVGVEDFRNASRTYQLIQETGLTPDQDTYNSLIIM 988
            E M+SEMEEA FK +L+I NS++++Y  +ED++   + YQ I+ETGL PD+ TYN+LIIM
Sbjct: 925  EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 984

Query: 989  YCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSLISALSKRQLVEEAEELFEELRSTGCKLD 1048
            YCRD RPEEG  LM +M+  G++P LDTYKSLISA  K++ +E+AE+LFEEL S G KLD
Sbjct: 985  YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1044

Query: 1049 RFFYHVMMKMYRNSGNHLKAERLLVMMKETGIDPTVATMHLLMVSYGSSGHPKEAEKVLN 1108
            R FYH MMK+ R+SG+  KAE+LL MMK  GI+PT+ATMHLLMVSY SSG+P+EAEKVL+
Sbjct: 1045 RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLS 1104

Query: 1109 DLKATGMNLDTLPYSSVIDAYLRNGDYNGGIQKLMGMKADGIEPDYRIWTCFIRAASLSE 1168
            +LK T + L TLPYSSVIDAYLR+ DYN GI++L+ MK +G+EPD+RIWTCF+RAAS S+
Sbjct: 1105 NLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSK 1164

Query: 1169 STTEAIIILNALRDTGFDLPIRLLTEKSGSLVLEVDQYLEKLVAMEDDDAAFNFVNALED 1228
               E +++L AL D GFDLPIRLL  +   LV EVD + EKL ++E D+AA NFVNAL +
Sbjct: 1165 EKIEVMLLLKALEDIGFDLPIRLLAGRPELLVSEVDGWFEKLKSIE-DNAALNFVNALLN 1224

Query: 1229 LLWAFELRATASWIFQLAIKRNIFRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQ 1288
            LLWAFELRATASW+FQL IKR IF  D+FRVADKDWGADFR+LS G+ALVALTLWLDHMQ
Sbjct: 1225 LLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALVALTLWLDHMQ 1284

Query: 1289 DASLQGFPESPKSVVLITGMAEYNMVSLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHSL 1348
            DASL+G+PESPKSVVLITG AEYN +SL+ TLK CLWEMGSPFLPC+TR+GLL+AKAHSL
Sbjct: 1285 DASLEGYPESPKSVVLITGTAEYNGISLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHSL 1344

Query: 1349 RMWLKDSSFCLDLELKDAPALPELNSMKLIDGCFIRRGLVSAFKDITERL-GFVRPKKFS 1408
            RMWLKDS FC DLELKD+ +LPE NSM LIDGCFIRRGLV AF  I ERL GFV PKKFS
Sbjct: 1345 RMWLKDSPFCFDLELKDSVSLPESNSMDLIDGCFIRRGLVPAFNHIKERLGGFVSPKKFS 1404

Query: 1409 RLALLPDEKRDKVIKADLEGRKEKLEKVKKMIKSGKVRRITKIKRRTYYRS 1453
            RLALLPDE R++VIK D+EG ++KLEK+KK     +   I    RR + RS
Sbjct: 1405 RLALLPDEMRERVIKTDIEGHRQKLEKMKKKKMGNETNGIN--TRRKFVRS 1439

[Close]

BLAST of Lcy02g011080 vs. ExPASy Swiss-Prot
Match: Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 2.7e-70
Identity = 241/1010 (23.86%), Postives = 428/1010 (42.38%), Query Frame = 0


Query: 193  LNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAIGNTVQVYNAMMGVYARNGR 252
            LNL H  +     +   L V GK  + A   ++  +    I      Y  +    +  G 
Sbjct: 112  LNLVH-TTETCNYMLEALRVDGKLEEMAYVFDLMQKR--IIKRDTNTYLTIFKSLSVKGG 171

Query: 253  FVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSLQFLNEVRKSGIRPDIITY 312
              Q    L  MR  G   +  S+N LI+  +KS   T   +++    +   G RP + TY
Sbjct: 172  LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTE--AMEVYRRMILEGFRPSLQTY 231

Query: 313  NTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVYGRCGLASRADQLFKELES 372
            ++L+    +  +++  M +  +ME    +P+++T+   I V GR G  + A ++ K ++ 
Sbjct: 232  SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 291

Query: 373  KGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDL 432
            +G  PD VTY  L+ A      ++  KE+ E+M       D +TY T++  +      D 
Sbjct: 292  EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 351

Query: 433  AFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTEMLDSGVKPTLRTYSALIC 492
              Q + +M+  G +PD VT+T+L+D+L K+    EA + +  M D G+ P L TY+ LIC
Sbjct: 352  VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 411

Query: 493  G-----------------------------------YGKAGKPVEAEKTFDCMLRSGIRP 552
            G                                   YGK+G  V A +TF+ M   GI P
Sbjct: 412  GLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAP 471

Query: 553  DYLAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVI 612
            + +A +  +    +    ++A  ++  +   GL PD   Y +M++   K  ++D+  K++
Sbjct: 472  NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLL 531

Query: 613  RDMQEQCGLNPQV-----LSSILIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSL 672
             +M E  G  P V     L + L K +  D A KM     +           ++L+    
Sbjct: 532  SEMMEN-GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 591

Query: 673  SGRHLEACELLEFLKERTSNSNQLVTESLIVVLCKAKQIDAAL---------------VE 732
            +G+  EA EL E + ++    N +   +L   LCK  ++  AL                 
Sbjct: 592  NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 651

Query: 733  YGNTTRGFSSYG-----------TNSLVYE------CLIQGCQEKELFDIASHIFSDMMF 792
            Y     G    G              LVY        L+ G  +  L + A  I ++ ++
Sbjct: 652  YNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLY 711

Query: 793  YGVKISENLY--QVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKII-------E 852
                   NL+   ++  +  + G      +  ER    G+  D  S  V II        
Sbjct: 712  NCADQPANLFWEDLIGSILAEAGIDNAVSF-SERLVANGICRDGDSILVPIIRYSCKHNN 771

Query: 853  AYGELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSP 912
              G   L++K    +G ++ KL T     +N LI    ++   E A+ VF  +   G  P
Sbjct: 772  VSGARTLFEKFTKDLG-VQPKLPT-----YNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 831

Query: 913  TVNSINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIY 972
             V + N LL A     ++ EL+ + +E+     + +  +  +++    + GN+ +   +Y
Sbjct: 832  DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 891

Query: 973  HG-MKAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVG 1032
            +  M    + PT   Y  +I+ L    R+ + + +   M + G +P+ +I N +I  +  
Sbjct: 892  YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 951

Query: 1033 VEDFRNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDT 1092
              +   A   ++ + + G+ PD  TY+ L+   C   R +EGL    E+K  G+ P +  
Sbjct: 952  AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 1011

Query: 1093 YKSLISALSKRQLVEEAEELFEELR-STGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMM 1120
            Y  +I+ L K   +EEA  LF E++ S G   D + Y+ ++     +G   +A ++   +
Sbjct: 1012 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1071

[Close]

BLAST of Lcy02g011080 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 6.1e-59
Identity = 185/763 (24.25%), Postives = 343/763 (44.95%), Query Frame = 0


Query: 112 VLGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDF 171
           VLG PS         +++++ K +   V+ L +++ +L     +A  LD  K +++  DF
Sbjct: 59  VLGNPS---------VSVEKGK-YSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDF 118

Query: 172 CFVVK-WVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTR-S 231
             V K + GR +W R+L +++++  + W  PN  +   ++++LG+       +E+F    
Sbjct: 119 ALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMP 178

Query: 232 EPAIGNTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMT 291
              +  +V  Y A++  Y RNGR+    ELLD M+     P ++++NT+INA  + G   
Sbjct: 179 SQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDW 238

Query: 292 PNLSLQFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNA 351
             L L    E+R  GI+PDI+TYNTL+SAC+     +EA  V+  M      PDL TY+ 
Sbjct: 239 EGL-LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 298

Query: 352 MISVYGRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNG 411
           ++  +G+     +   L  E+ S G  PD  +YN LL A+A+ G++++   +  +M   G
Sbjct: 299 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 358

Query: 412 FGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAA 471
              +  TY+ +++++G+  ++D   QL+ +MK S   PD  TY +LI+  G+    +E  
Sbjct: 359 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 418

Query: 472 NIMTEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLF 531
            +  +M++  ++P + TY  +I   GK G   +A K    M  + I P   AY+ +I+ F
Sbjct: 419 TLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAF 478

Query: 532 LRFNETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQ 591
            +    ++A++ +  M   G  P    +  +L +                          
Sbjct: 479 GQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA------------------------ 538

Query: 592 VLSSILIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKER 651
                  +G     +  +L   +D+G   + +   + +  Y   G+  EA +    +++ 
Sbjct: 539 -------RGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS 598

Query: 652 TSNSNQLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFD 711
             + ++   E+++ V   A+ +D                             C+E+    
Sbjct: 599 RCDPDERTLEAVLSVYSFARLVDE----------------------------CREQ---- 658

Query: 712 IASHIFSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKI 771
                F +M    +  S   Y +M+ +Y KT   +  + LLE   L   V +      ++
Sbjct: 659 -----FEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM-LSNRVSNIHQVIGQM 718

Query: 772 IEA-YGELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDG 831
           I+  Y +   WQ  E ++  L  +   +  + +NAL+ A    G  ERA  V N   + G
Sbjct: 719 IKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRG 740

Query: 832 PSPTVNSINGLLQALIVDNRLKE------LYVVVQELQDMGFK 866
             P +   N L+ ++ V +R+ E      L V + ++ DM  K
Sbjct: 779 LFPELFRKNKLVWSVDV-HRMSEGGMYTALSVWLNDINDMLLK 740

[Close]

BLAST of Lcy02g011080 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 230.7 bits (587), Expect = 1.0e-58
Identity = 214/980 (21.84%), Postives = 406/980 (41.43%), Query Frame = 0


Query: 236  TVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSLQ 295
            +V   NA++G   ++G  V V   L  M  R   PD+ +FN LIN     G      S  
Sbjct: 157  SVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSF--EKSSY 216

Query: 296  FLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVYG 355
             + ++ KSG  P I+TYNT++    ++   + A+++ + M+      D+ TYN +I    
Sbjct: 217  LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLC 276

Query: 356  RCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDEM 415
            R    ++   L +++  +   P+ VTYN+L+  F+ EG V    ++  EM++ G   + +
Sbjct: 277  RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 336

Query: 416  TYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTEM 475
            T+N +I  +  +     A +++  M+  G  P EV+Y VL+D L K+++ + A      M
Sbjct: 337  TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 396

Query: 476  LDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNET 535
              +GV     TY+ +I G  K G   EA    + M + GI PD + YS +I+ F +    
Sbjct: 397  KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 456

Query: 536  KKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSIL 595
            K A  +   + R GL+P+G +Y  ++ N  +   L +  ++   M  +         ++L
Sbjct: 457  KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 516

Query: 596  IKGEC----YDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTS 655
            +   C       A + +R     G   +  +   +++ Y  SG  L+A  + + + +   
Sbjct: 517  VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 576

Query: 656  NSNQLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIA 715
            +       SL+  LCK   +  A  E    +        ++++Y  L+    +      A
Sbjct: 577  HPTFFTYGSLLKGLCKGGHLREA--EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 636

Query: 716  SHIFSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIE 775
              +F +M+   +      Y  ++   C+ G   IA    + AE  G V+ +   Y   ++
Sbjct: 637  VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD 696

Query: 776  AYGELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSP 835
               +   W+        +     T D    NA+I  Y++ G  E+   +   M      P
Sbjct: 697  GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP 756

Query: 836  TVNSINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIY 895
             + + N                                   ++L  +++  ++     +Y
Sbjct: 757  NLTTYN-----------------------------------ILLHGYSKRKDVSTSFLLY 816

Query: 896  HGMKAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGV 955
              +   G LP      S++  +C    +     +L      G + D    N +I      
Sbjct: 817  RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 876

Query: 956  EDFRNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTY 1015
             +   A    +++   G++ D+DT ++++ +  R+ R +E   ++HEM ++G+ P    Y
Sbjct: 877  GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 936

Query: 1016 KSLISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKE 1075
              LI+ L +   ++ A  + EE+ +            M++     G   +A  LL  M +
Sbjct: 937  IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 996

Query: 1076 TGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDAYLRNGDYNG 1135
              + PT+A+   LM     +G+  EA ++   +   G+ LD + Y+ +I      GD   
Sbjct: 997  MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1056

Query: 1136 GIQKLMGMKADGIEPDYRIWTCFIRAASLSEST-TEAIIILNALRDTGFDLPIRLLTEKS 1195
              +    MK DG   +   +   IR     E+  + A IIL  L   GF   + L  +  
Sbjct: 1057 AFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQDSH 1093

Query: 1196 GSLVLEVDQYLEKLVAMEDD 1211
             +L +     +EKL A++ +
Sbjct: 1117 RNLKMA----MEKLKALQSN 1093

[Close]

BLAST of Lcy02g011080 vs. ExPASy Swiss-Prot
Match: Q9M907 (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX=3702 GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.3e-58
Identity = 177/779 (22.72%), Postives = 330/779 (42.36%), Query Frame = 0


Query: 295  QFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 354
            Q L E+  +G  P + T   ++  C + + L E   V   M +   +P    Y  +I  +
Sbjct: 119  QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178

Query: 355  GRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDE 414
                 +     LF++++  G+ P    + +L+  FA+EG V+    + +EM ++    D 
Sbjct: 179  SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238

Query: 415  MTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTE 474
            + YN  I  +GK  + D+A++ + +++ +G  PDEVTYT +I  L K+++++EA  +   
Sbjct: 239  VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298

Query: 475  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNE 534
            +  +   P    Y+ +I GYG AGK  EA    +     G  P  +AY+ ++    +  +
Sbjct: 299  LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358

Query: 535  TKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSI 594
              +A+ +++EM +D   P+ + Y +++  L +  KLD   + +RD  ++ GL P V +  
Sbjct: 359  VDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFE-LRDSMQKAGLFPNVRTVN 418

Query: 595  LIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTSNSN 654
            ++     D   K  +L                           EAC + E +  +    +
Sbjct: 419  IM----VDRLCKSQKLD--------------------------EACAMFEEMDYKVCTPD 478

Query: 655  QLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIASHI 714
            ++   SLI  L K  ++D A   Y       S   TNS+VY  LI+        +    I
Sbjct: 479  EITFCSLIDGLGKVGRVDDAYKVYEKMLD--SDCRTNSIVYTSLIKNFFNHGRKEDGHKI 538

Query: 715  FSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIEAYG 774
            + DM+         L    M    K G PE    + E  +    V  D  +Y  +I    
Sbjct: 539  YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV-PDARSYSILIHGLI 598

Query: 775  ELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTVN 834
            +     +   L  +++ +   +D + +N +I  + K G   +A  +   M   G  PTV 
Sbjct: 599  KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 658

Query: 835  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHGM 894
            +   ++  L   +RL E Y++ +E +    +++      ++D F + G I E   I   +
Sbjct: 659  TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 718

Query: 895  KAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGVEDF 954
               G  P ++ + S+++ L   + + +       M+E    P+      +I     V  F
Sbjct: 719  MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 778

Query: 955  RNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1014
              A   +Q +Q+ G+ P   +Y ++I    +     E  +L    K  G  P    Y ++
Sbjct: 779  NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 838

Query: 1015 ISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKETG 1074
            I  LS      +A  LFEE R  G  +      V++     +    +A  +  +++ETG
Sbjct: 839  IEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862

[Close]

BLAST of Lcy02g011080 vs. ExPASy TrEMBL
Match: A0A6J1H2M4 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111459534 PE=4 SV=1)

HSP 1 Score: 2682.9 bits (6953), Expect = 0.0e+00
Identity = 1360/1465 (92.83%), Postives = 1411/1465 (96.31%), Query Frame = 0


Query: 1    MACSAVLPLAFASSSKVCRPTSASSSSIEQQSEINTNTTQKFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLAFASSSKVC+PTSASS    +QSE NTNT+Q+FRYSRASPSVRWPNLKLTE
Sbjct: 1    MACSAVLPLAFASSSKVCKPTSASSI---EQSETNTNTSQQFRYSRASPSVRWPNLKLTE 60

Query: 61   SFQLPSQTHFTVPSPWQTHVVDESEASVRTQNSEI------EDELESVGMASDETREVLG 120
            SFQ PSQT FTV SP QTH VDESE S+RTQNSEI      EDELES+ M SDET+EVLG
Sbjct: 61   SFQPPSQTQFTVSSPSQTHGVDESEVSIRTQNSEIRDGDFVEDELESMVMVSDETQEVLG 120

Query: 121  RPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV 180
            RPSKTRVKKM KLALKRAKDWRERVQ LTDRILALKQDEFVADVLDDRKVQMTPTDFCFV
Sbjct: 121  RPSKTRVKKMTKLALKRAKDWRERVQLLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV 180

Query: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAIG 240
            VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSE AIG
Sbjct: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSESAIG 240

Query: 241  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSL 300
            NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNT+INARMKSGPM+PNL L
Sbjct: 241  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTMINARMKSGPMSPNLCL 300

Query: 301  QFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360
            QFLNEVRKSG+RPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY
Sbjct: 301  QFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360

Query: 361  GRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDE 420
            GRCGLASRA+QLFKEL SKGFFPDAVTYNSLLYAFAREGN EKVKEICEEMV+NGFGKDE
Sbjct: 361  GRCGLASRAEQLFKELASKGFFPDAVTYNSLLYAFAREGNEEKVKEICEEMVSNGFGKDE 420

Query: 421  MTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTE 480
            MTYNT+IHMYGKQEQHDLAFQLYRDMKLSGR PDEVTYTVLIDSLGKSSK+EEAAN+MTE
Sbjct: 421  MTYNTMIHMYGKQEQHDLAFQLYRDMKLSGRTPDEVTYTVLIDSLGKSSKIEEAANVMTE 480

Query: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNE 540
            MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPD LAYSVMIDLFLRFNE
Sbjct: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDCLAYSVMIDLFLRFNE 540

Query: 541  TKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSI 600
            TKKAM LY++MVRDGLTPDGALYEVMLRNL KE KLD+IDKVI DMQE+CGLNPQV+SSI
Sbjct: 541  TKKAMFLYRKMVRDGLTPDGALYEVMLRNLRKENKLDEIDKVISDMQERCGLNPQVISSI 600

Query: 601  LIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTSNSN 660
            L+K ECYDHAAKMLRLA+DTGYDLDHE LLSILSTYSLSGRHLEACELLEFLKE+TSNSN
Sbjct: 601  LVKEECYDHAAKMLRLAIDTGYDLDHETLLSILSTYSLSGRHLEACELLEFLKEKTSNSN 660

Query: 661  QLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIASHI 720
            QLVTES+IVVLCKAKQIDAALVEY NTTRGF S+GT+S+VYECL+QGCQEKELFDIASHI
Sbjct: 661  QLVTESMIVVLCKAKQIDAALVEYDNTTRGFGSFGTSSIVYECLLQGCQEKELFDIASHI 720

Query: 721  FSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIEAYG 780
            FSDMMFYGVKISE+LYQVMMLM+CKTGYPEIAHYLLERAELEGV++DDVSTYV IIEAYG
Sbjct: 721  FSDMMFYGVKISESLYQVMMLMHCKTGYPEIAHYLLERAELEGVIVDDVSTYVNIIEAYG 780

Query: 781  ELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTVN 840
            ELKLWQKAESLVG L+LKLATIDRKIWNALIQAYAKSGCYERARAVFNTMM +GPSP+VN
Sbjct: 781  ELKLWQKAESLVGKLKLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMCNGPSPSVN 840

Query: 841  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHGM 900
            SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSS+LLMLDAFARDGNIFEVKKIYHGM
Sbjct: 841  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSILLMLDAFARDGNIFEVKKIYHGM 900

Query: 901  KAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGVEDF 960
            KAAGYLPTMHLYRSMI LLC GKRVRDVEAML EMEEAGFKPDLSILNSVI+LYVGVEDF
Sbjct: 901  KAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLLEMEEAGFKPDLSILNSVIKLYVGVEDF 960

Query: 961  RNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020
            RNASR YQLIQETGLTPD+DTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL
Sbjct: 961  RNASRMYQLIQETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020

Query: 1021 ISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKETGI 1080
            ISALSKRQLVEEAEELFEELRS GCKLDRFFYHVMMKM+RN+GNHLKAERLLVMMKE+GI
Sbjct: 1021 ISALSKRQLVEEAEELFEELRSNGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESGI 1080

Query: 1081 DPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDAYLRNGDYNGGIQ 1140
            +PTVATMHLLMVSYGSSGHPKEAE+VLNDLKATGMNLDTLPYSSVIDAYLR GDYNGGI+
Sbjct: 1081 EPTVATMHLLMVSYGSSGHPKEAEQVLNDLKATGMNLDTLPYSSVIDAYLRKGDYNGGIE 1140

Query: 1141 KLMGMKADGIEPDYRIWTCFIRAASLSESTTEAIIILNALRDTGFDLPIRLLTEKSGSLV 1200
            KLM MKADGIEPDYRIWTCFIRAASLSE T EAIIILNALRDTGFDLPIRLLTEKS SLV
Sbjct: 1141 KLMEMKADGIEPDYRIWTCFIRAASLSEGTGEAIIILNALRDTGFDLPIRLLTEKSQSLV 1200

Query: 1201 LEVDQYLEKLVAMEDDDAAFNFVNALEDLLWAFELRATASWIFQLAIKRNIFRQDIFRVA 1260
            LEVDQ LEKL AMEDDDAAFNFVNALEDLLWAFELRATASW+FQLAIKRNI+RQDIFRVA
Sbjct: 1201 LEVDQCLEKLGAMEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRNIYRQDIFRVA 1260

Query: 1261 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGMAEYNMVSLNSTL 1320
            DKDWGADFRKLSAGSALVALTLWLDHMQDASLQG PESPKSVVLITG AEYNMVSLNSTL
Sbjct: 1261 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGCPESPKSVVLITGSAEYNMVSLNSTL 1320

Query: 1321 KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPELNSMKLIDG 1380
            KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFC DLELKDAPALPELNSMKLIDG
Sbjct: 1321 KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCSDLELKDAPALPELNSMKLIDG 1380

Query: 1381 CFIRRGLVSAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIK 1440
            CFIRRGLV AFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIK
Sbjct: 1381 CFIRRGLVPAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIK 1440

Query: 1441 SGKVRRITKIKRRTYYRSLDAMKKN 1460
            SGKVRRIT+IK+RTY+RSL+A+KKN
Sbjct: 1441 SGKVRRITRIKKRTYHRSLNAVKKN 1462

[Close]

BLAST of Lcy02g011080 vs. ExPASy TrEMBL
Match: A0A6J1K203 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111490996 PE=4 SV=1)

HSP 1 Score: 2677.9 bits (6940), Expect = 0.0e+00
Identity = 1356/1465 (92.56%), Postives = 1411/1465 (96.31%), Query Frame = 0


Query: 1    MACSAVLPLAFASSSKVCRPTSASSSSIEQQSEINTNTTQKFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLAFASSSKVC+PTSASS    +QSEINTNT+Q+FRYSRASPSVRWPNLKLTE
Sbjct: 50   MACSAVLPLAFASSSKVCKPTSASSI---EQSEINTNTSQQFRYSRASPSVRWPNLKLTE 109

Query: 61   SFQLPSQTHFTVPSPWQTHVVDESEASVRTQNSEI------EDELESVGMASDETREVLG 120
            SFQ PSQT FTVPSP QTH  DESE S+RTQNSEI      EDE ES+ M SDET+EVLG
Sbjct: 110  SFQPPSQTQFTVPSPSQTHGFDESEVSIRTQNSEIRDGDFVEDEFESMVMVSDETQEVLG 169

Query: 121  RPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV 180
            RPSKTRVKKM KLALKRAKDWRERVQFLTD+ILALKQDEFVADVLDDRKVQMTPTDFCFV
Sbjct: 170  RPSKTRVKKMTKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFCFV 229

Query: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAIG 240
            VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSE  IG
Sbjct: 230  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSESVIG 289

Query: 241  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSL 300
            NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNT+INARMKSG MTPNL L
Sbjct: 290  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTMINARMKSGSMTPNLCL 349

Query: 301  QFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360
            QFLNEVRKSG+RPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY
Sbjct: 350  QFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 409

Query: 361  GRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDE 420
            GRCGLASRA+QLFKEL SKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMV+NGFGKDE
Sbjct: 410  GRCGLASRAEQLFKELASKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVSNGFGKDE 469

Query: 421  MTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTE 480
            MTYNTIIHMYGKQE+HDLAFQLYRDMKLSGR PDEVTYTVLIDSLGKSSK+EEAANIMTE
Sbjct: 470  MTYNTIIHMYGKQEKHDLAFQLYRDMKLSGRTPDEVTYTVLIDSLGKSSKIEEAANIMTE 529

Query: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNE 540
            MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPD LAYSVMIDLFLRFNE
Sbjct: 530  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDCLAYSVMIDLFLRFNE 589

Query: 541  TKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSI 600
            TKKAM LY++M+RDGLTPDGALYEVMLRNL KE KLD+ID+VI DMQE+C LNPQV+SSI
Sbjct: 590  TKKAMFLYRKMLRDGLTPDGALYEVMLRNLRKENKLDEIDRVISDMQERCDLNPQVISSI 649

Query: 601  LIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTSNSN 660
            L+K ECYDHAAKMLRLA+DTGYDLDHE LLSILSTYSLSGRHLEACELLEFLKERTSNSN
Sbjct: 650  LVKEECYDHAAKMLRLAIDTGYDLDHETLLSILSTYSLSGRHLEACELLEFLKERTSNSN 709

Query: 661  QLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIASHI 720
            QLVTES+IVVLCKAKQIDAALVEY NTTRGF S+GT+S+VYECL+QGCQEKELFDIASHI
Sbjct: 710  QLVTESMIVVLCKAKQIDAALVEYDNTTRGFGSFGTSSIVYECLLQGCQEKELFDIASHI 769

Query: 721  FSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIEAYG 780
            FSDMMFYGVKISE+LYQVMMLM+CKTGYPEIAHYLLERAELEGV++DDVST VKIIEAYG
Sbjct: 770  FSDMMFYGVKISESLYQVMMLMHCKTGYPEIAHYLLERAELEGVIVDDVSTCVKIIEAYG 829

Query: 781  ELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTVN 840
            ELKLWQKAESLVG L+LKLATIDRKIWNALIQAYAKSGCYERARAVFNTMM +GPSP+VN
Sbjct: 830  ELKLWQKAESLVGKLKLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMCNGPSPSVN 889

Query: 841  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHGM 900
            SINGLLQALIVDNRLKELYVVVQELQDMGFK+SKSS+LLMLDAFARDGNIFEVKKIYHGM
Sbjct: 890  SINGLLQALIVDNRLKELYVVVQELQDMGFKVSKSSILLMLDAFARDGNIFEVKKIYHGM 949

Query: 901  KAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGVEDF 960
            KAAGYLPTMHLYRSMI LLC GKRVRDVEAML EMEEAGFKPDLSILNSVI+LYVGVEDF
Sbjct: 950  KAAGYLPTMHLYRSMIALLCNGKRVRDVEAMLLEMEEAGFKPDLSILNSVIKLYVGVEDF 1009

Query: 961  RNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020
            RNASR YQLIQETGLTPD+DTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL
Sbjct: 1010 RNASRMYQLIQETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1069

Query: 1021 ISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKETGI 1080
            ISALSKRQLVEEAEELFEELRS GCKLDRFFYHVMMKM+RN+GNHLKAERLLVMMKE+GI
Sbjct: 1070 ISALSKRQLVEEAEELFEELRSNGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESGI 1129

Query: 1081 DPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDAYLRNGDYNGGIQ 1140
            DPTVATMHLLMVSYGSSGHPKEAE+VLNDLKATGMNLDTLPYSSVIDAYLRNGDY GGIQ
Sbjct: 1130 DPTVATMHLLMVSYGSSGHPKEAEQVLNDLKATGMNLDTLPYSSVIDAYLRNGDYKGGIQ 1189

Query: 1141 KLMGMKADGIEPDYRIWTCFIRAASLSESTTEAIIILNALRDTGFDLPIRLLTEKSGSLV 1200
            KL+ MKADGIEPDYRIWTCFIRAASLSEST EAIIILNAL+DTGFDLPIRLLTEKS SLV
Sbjct: 1190 KLVEMKADGIEPDYRIWTCFIRAASLSESTGEAIIILNALQDTGFDLPIRLLTEKSQSLV 1249

Query: 1201 LEVDQYLEKLVAMEDDDAAFNFVNALEDLLWAFELRATASWIFQLAIKRNIFRQDIFRVA 1260
            LEVDQ LEKL AMEDDDAAFNFVNALEDLLWAFELRATASW+FQLAIKRNI+RQDIFRVA
Sbjct: 1250 LEVDQCLEKLGAMEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRNIYRQDIFRVA 1309

Query: 1261 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGMAEYNMVSLNSTL 1320
            DKDWGADFRKLSAGSALVALTLWLDHMQDASLQG PESPKSVVLITG AEYNMVSLNSTL
Sbjct: 1310 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGCPESPKSVVLITGSAEYNMVSLNSTL 1369

Query: 1321 KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPELNSMKLIDG 1380
            KVCLWEMGSPFLPCRTRSGLL+AK+HSLRMWLKDSSFC DLELKDAPALPELNSMKLIDG
Sbjct: 1370 KVCLWEMGSPFLPCRTRSGLLVAKSHSLRMWLKDSSFCSDLELKDAPALPELNSMKLIDG 1429

Query: 1381 CFIRRGLVSAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIK 1440
            CFIRRGLV AFKDITERLGFVRPKKFSRLALLPDEKRD+VIKADLEGRKEKLEKVKKMIK
Sbjct: 1430 CFIRRGLVPAFKDITERLGFVRPKKFSRLALLPDEKRDRVIKADLEGRKEKLEKVKKMIK 1489

Query: 1441 SGKVRRITKIKRRTYYRSLDAMKKN 1460
            SGKVRRIT+IK+RTY+RSL+A+KKN
Sbjct: 1490 SGKVRRITRIKKRTYHRSLNAVKKN 1511

[Close]

BLAST of Lcy02g011080 vs. ExPASy TrEMBL
Match: A0A6J1DUB0 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024083 PE=4 SV=1)

HSP 1 Score: 2654.4 bits (6879), Expect = 0.0e+00
Identity = 1336/1465 (91.19%), Postives = 1405/1465 (95.90%), Query Frame = 0


Query: 1    MACSAVLPLAFASSSKVCRPTSASSSSIEQQSEINTNTTQKFRYSRASPSVRWPNLKLTE 60
            MAC+AVLPLAFA+S+KV + TSASSSS EQ +EINTNTTQKF YSRASPSVRWPNLKLT+
Sbjct: 1    MACTAVLPLAFAASTKVRKVTSASSSSTEQHNEINTNTTQKFHYSRASPSVRWPNLKLTD 60

Query: 61   SFQLPSQTHFTVPSPWQTHVVDESEASVRTQNSEIED------ELESVGMASDETREVLG 120
            SFQLPSQTHFT+PSP QTHVVDES+ SVRTQNSEI+D      ELESVGM SDET+E LG
Sbjct: 61   SFQLPSQTHFTLPSPLQTHVVDESDVSVRTQNSEIKDGNCEGNELESVGMMSDETQEALG 120

Query: 121  RPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV 180
            R SKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV
Sbjct: 121  RRSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV 180

Query: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAIG 240
            VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSE AIG
Sbjct: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSESAIG 240

Query: 241  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSL 300
            NTVQVYNAMMGVYARNGRF+QVQ LLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSL
Sbjct: 241  NTVQVYNAMMGVYARNGRFLQVQGLLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSL 300

Query: 301  QFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360
            QFLNEVRKSG+RPDIITYNTLISACSRESNLEEAMKVYNDME HNCQPDLWTYNAMISVY
Sbjct: 301  QFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMEAHNCQPDLWTYNAMISVY 360

Query: 361  GRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDE 420
            GRCGLASRA++LFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMV+NGF KDE
Sbjct: 361  GRCGLASRAEKLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVSNGFAKDE 420

Query: 421  MTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTE 480
            MTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSK+EEA NIMTE
Sbjct: 421  MTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKIEEATNIMTE 480

Query: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNE 540
            MLDSGVKPTLRTYSALICGYGKAGKPVEAE TFDCMLRSGIRPDYLAYSVMIDLFLRFNE
Sbjct: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAENTFDCMLRSGIRPDYLAYSVMIDLFLRFNE 540

Query: 541  TKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSI 600
            TKKAMLLYKEMV DGLTPDG LYEVMLRNLVKE +LDDI+K IRDMQ++CGLNPQV+SSI
Sbjct: 541  TKKAMLLYKEMVCDGLTPDGVLYEVMLRNLVKENRLDDINKAIRDMQDKCGLNPQVISSI 600

Query: 601  LIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTSNSN 660
            LIKGEC+DHAAKMLR+A+DTGYDL+HENLLSILSTYSLSGRHLEACELLEF +ERTSNS+
Sbjct: 601  LIKGECFDHAAKMLRMAIDTGYDLNHENLLSILSTYSLSGRHLEACELLEFFRERTSNSD 660

Query: 661  QLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIASHI 720
             LV ESLIV+LCKA +IDAAL+EYGNTT+GF SYGT+S++YECLIQGCQEKELFD AS I
Sbjct: 661  HLVAESLIVLLCKAGKIDAALMEYGNTTKGFGSYGTSSIMYECLIQGCQEKELFDTASQI 720

Query: 721  FSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIEAYG 780
            FSDM+FYGVK S+NLYQVMMLM+CKTGYPEIAHYLLERAELE VVIDD+S YVKII+AYG
Sbjct: 721  FSDMIFYGVKTSKNLYQVMMLMHCKTGYPEIAHYLLERAELEEVVIDDISIYVKIIDAYG 780

Query: 781  ELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTVN 840
            ELKLWQKAESLVGNLRLKL TIDRKIWNALIQAYAKSGCYERARAVFN MM DGPSPTVN
Sbjct: 781  ELKLWQKAESLVGNLRLKLTTIDRKIWNALIQAYAKSGCYERARAVFNNMMHDGPSPTVN 840

Query: 841  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHGM 900
            SINGLL+ALIVDNRLKELYVVVQELQDMGFKISKSS+LL+LDAFARDGNIFEVKKIYHGM
Sbjct: 841  SINGLLKALIVDNRLKELYVVVQELQDMGFKISKSSILLILDAFARDGNIFEVKKIYHGM 900

Query: 901  KAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGVEDF 960
            KAAGYLPTMHLYRSMI LLC GKRVRDVEAMLSEMEEAGF+PDLSILNSVI+LYVGVEDF
Sbjct: 901  KAAGYLPTMHLYRSMIVLLCKGKRVRDVEAMLSEMEEAGFRPDLSILNSVIKLYVGVEDF 960

Query: 961  RNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020
            RNASR YQLI+E G TP++DTYNSLIIMYCRDCRPEEGLSLMHEMKR+GMEP+LDTYKSL
Sbjct: 961  RNASRVYQLIKEIGFTPNEDTYNSLIIMYCRDCRPEEGLSLMHEMKRQGMEPMLDTYKSL 1020

Query: 1021 ISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKETGI 1080
            ISALSKRQLVEEAEELFEELR+ GCKLDRFFYHVMMKM+RNSGNHLKAERLLVMMKETGI
Sbjct: 1021 ISALSKRQLVEEAEELFEELRANGCKLDRFFYHVMMKMFRNSGNHLKAERLLVMMKETGI 1080

Query: 1081 DPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDAYLRNGDYNGGIQ 1140
            DPTVATMHLLMVSYGSSGHPKEAE+VLNDLKAT MNLDTLPYSSVIDA+LRNGDY+GGIQ
Sbjct: 1081 DPTVATMHLLMVSYGSSGHPKEAERVLNDLKATSMNLDTLPYSSVIDAFLRNGDYDGGIQ 1140

Query: 1141 KLMGMKADGIEPDYRIWTCFIRAASLSESTTEAIIILNALRDTGFDLPIRLLTEKSGSLV 1200
            KLM MKADGIEPDYRIWTCFIRAAS SEST+EAII+LNALRDTGF+LP+RLLTE+SGSLV
Sbjct: 1141 KLMEMKADGIEPDYRIWTCFIRAASFSESTSEAIIVLNALRDTGFNLPVRLLTERSGSLV 1200

Query: 1201 LEVDQYLEKLVAMEDDDAAFNFVNALEDLLWAFELRATASWIFQLAIKRNIFRQDIFRVA 1260
            LEVDQ LEKL AMED DAAFNFVNALEDLLWAFELRATASW+F+LAIK++I++QDIFRVA
Sbjct: 1201 LEVDQVLEKLGAMEDGDAAFNFVNALEDLLWAFELRATASWVFELAIKKSIYQQDIFRVA 1260

Query: 1261 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGMAEYNMVSLNSTL 1320
            DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITG AEYNMVSLNSTL
Sbjct: 1261 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGTAEYNMVSLNSTL 1320

Query: 1321 KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPELNSMKLIDG 1380
            KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDA ALPE+NSMKLIDG
Sbjct: 1321 KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAQALPEINSMKLIDG 1380

Query: 1381 CFIRRGLVSAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIK 1440
            CFIRRGLV AFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVK MI 
Sbjct: 1381 CFIRRGLVPAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKNMIN 1440

Query: 1441 SGKVRRITKIKRRTYYRSLDAMKKN 1460
            SGKVRR+TKIKRR Y RS+  +KKN
Sbjct: 1441 SGKVRRLTKIKRRKYRRSIHTVKKN 1465

[Close]

BLAST of Lcy02g011080 vs. ExPASy TrEMBL
Match: A0A1S3CKK9 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501875 PE=4 SV=1)

HSP 1 Score: 2653.2 bits (6876), Expect = 0.0e+00
Identity = 1337/1466 (91.20%), Postives = 1401/1466 (95.57%), Query Frame = 0


Query: 1    MACSAVLPLAFASSSKVCRPTSASSSSIEQQSEINTNTTQKFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLAF SSSKVC+PTS+SSSSIEQ  EI+TNT+QKFRYSRASPSVRWPNLKLTE
Sbjct: 1    MACSAVLPLAFTSSSKVCKPTSSSSSSIEQHIEIHTNTSQKFRYSRASPSVRWPNLKLTE 60

Query: 61   SFQLPSQTHFTVPSP-WQTHVVDESEASVRTQNSEI-------EDELESVGMASDETREV 120
            SFQLPSQTHFT P P  QTH+VDESE S RTQ SEI       EDELES  M SDET+EV
Sbjct: 61   SFQLPSQTHFTAPPPSSQTHMVDESEVSPRTQTSEIRDGSSVEEDELESSRMVSDETQEV 120

Query: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFC 180
            LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALK DEFVADVLDDRKVQMTPTDFC
Sbjct: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKPDEFVADVLDDRKVQMTPTDFC 180

Query: 181  FVVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPA 240
            FVVKWVGRSNW RALEVYEWLNLRHWYSPNARMLATILAVLGKANQE LAVEIFTRSEPA
Sbjct: 181  FVVKWVGRSNWQRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA 240

Query: 241  IGNTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNL 300
            IGNTVQVYNAMMGVYARNGRFV VQELLDLMR RGCEPDLVSFNTLINARMKSGPMTPNL
Sbjct: 241  IGNTVQVYNAMMGVYARNGRFVLVQELLDLMRKRGCEPDLVSFNTLINARMKSGPMTPNL 300

Query: 301  SLQFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMIS 360
            SLQFLNEVRKSG+RPDIITYNTLISACSRESNLEEAMKVYNDMERHNC PDLWTYNAMIS
Sbjct: 301  SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCLPDLWTYNAMIS 360

Query: 361  VYGRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGK 420
            VYGRCGLASRA+QLF ELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMV+NGFGK
Sbjct: 361  VYGRCGLASRAEQLFMELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVSNGFGK 420

Query: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIM 480
            DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDE+TYT+LIDSLGKSSK+EEA NIM
Sbjct: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEITYTILIDSLGKSSKIEEAGNIM 480

Query: 481  TEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRF 540
            TEMLDSGVKPTLRTYSALICGYGK GKPVEAEK FDCMLRSGIRPDYLAYSVMIDLFLRF
Sbjct: 481  TEMLDSGVKPTLRTYSALICGYGKVGKPVEAEKIFDCMLRSGIRPDYLAYSVMIDLFLRF 540

Query: 541  NETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLS 600
            NETKKAMLLYKEMV DGLTPDGALYEVMLRNLVKE KLDDIDKV+RDMQE+CG+NPQ +S
Sbjct: 541  NETKKAMLLYKEMVCDGLTPDGALYEVMLRNLVKENKLDDIDKVVRDMQEECGMNPQAIS 600

Query: 601  SILIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTSN 660
            S+LIKGECY HAAKMLR+A++TGYDLD+ENLLSILSTYSLSGRHLEACELLEFLKE+TSN
Sbjct: 601  SVLIKGECYGHAAKMLRVAIETGYDLDNENLLSILSTYSLSGRHLEACELLEFLKEKTSN 660

Query: 661  SNQLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIAS 720
            SNQLVTESLIVVLCK KQIDAALVEYGN  R F SYGT+SL+YECLIQGCQEKELFD AS
Sbjct: 661  SNQLVTESLIVVLCKTKQIDAALVEYGNMKRVFGSYGTSSLMYECLIQGCQEKELFDTAS 720

Query: 721  HIFSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIEA 780
            HIFSDMMFYGVKIS+ LYQVM+LMYCK GYPEIAHYLLERAELEG+V+DDVSTYV+II++
Sbjct: 721  HIFSDMMFYGVKISDKLYQVMILMYCKRGYPEIAHYLLERAELEGIVVDDVSTYVEIIDS 780

Query: 781  YGELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPT 840
            +GELKLWQKAESLVGN+RLKLA +DRKIWNALIQAYAK GCYERARAVFNTMMRDGPSPT
Sbjct: 781  FGELKLWQKAESLVGNMRLKLAAVDRKIWNALIQAYAKCGCYERARAVFNTMMRDGPSPT 840

Query: 841  VNSINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900
            V SINGLLQALI DNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH
Sbjct: 841  VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900

Query: 901  GMKAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGVE 960
            GMKAAGYLPTMHLYRSMI LLC GKRVRDVEAMLSEMEEAGFKPDL ILNSVI+LYVGVE
Sbjct: 901  GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEEAGFKPDLFILNSVIKLYVGVE 960

Query: 961  DFRNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020
            DF+NASR Y LI ETGLTPD+DTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK
Sbjct: 961  DFKNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020

Query: 1021 SLISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKET 1080
            SLISALSKRQLVEEAEELFEELR +G KLDRFFYHVMMKM+RN+GNHLKAE LLVMMKE+
Sbjct: 1021 SLISALSKRQLVEEAEELFEELRGSGYKLDRFFYHVMMKMFRNTGNHLKAESLLVMMKES 1080

Query: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDAYLRNGDYNGG 1140
            GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGM+LDTLPYSSVIDAYLRN DY+GG
Sbjct: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRDYSGG 1140

Query: 1141 IQKLMGMKADGIEPDYRIWTCFIRAASLSESTTEAIIILNALRDTGFDLPIRLLTEKSGS 1200
            IQKLM MKADGIEPDYRIWTCFIRAASLSES++EAIIILNAL+DTGFDLPIRLLT+KSG+
Sbjct: 1141 IQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQDTGFDLPIRLLTQKSGT 1200

Query: 1201 LVLEVDQYLEKLVAMEDDDAAFNFVNALEDLLWAFELRATASWIFQLAIKRNIFRQDIFR 1260
            L+LEVDQ+LEKL A+EDDDAAFNFVNALEDLLWAFELRATASW+FQLAIKR+I+RQDIFR
Sbjct: 1201 LILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRSIYRQDIFR 1260

Query: 1261 VADKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGMAEYNMVSLNS 1320
            VADKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITG AEYNM+SLNS
Sbjct: 1261 VADKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGTAEYNMISLNS 1320

Query: 1321 TLKVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPELNSMKLI 1380
            TLKVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPE NSMK+I
Sbjct: 1321 TLKVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPEFNSMKVI 1380

Query: 1381 DGCFIRRGLVSAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKM 1440
            +GCFIRRGLV AFKDIT RLGFVRPKKFSRLALLPDEKRDKVI+ADLEGRKEKLEKVK++
Sbjct: 1381 NGCFIRRGLVPAFKDITGRLGFVRPKKFSRLALLPDEKRDKVIEADLEGRKEKLEKVKQL 1440

Query: 1441 IKSGKVRRITKIKRRTYYRSLDAMKK 1459
            I+SGK +RITKIK+R YYR LDA+KK
Sbjct: 1441 IESGKAKRITKIKKRAYYRRLDALKK 1466

[Close]

BLAST of Lcy02g011080 vs. ExPASy TrEMBL
Match: A0A5A7UY21 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1779G00040 PE=4 SV=1)

HSP 1 Score: 2653.2 bits (6876), Expect = 0.0e+00
Identity = 1337/1466 (91.20%), Postives = 1401/1466 (95.57%), Query Frame = 0


Query: 1    MACSAVLPLAFASSSKVCRPTSASSSSIEQQSEINTNTTQKFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLAF SSSKVC+PTS+SSSSIEQ  EI+TNT+QKFRYSRASPSVRWPNLKLTE
Sbjct: 1    MACSAVLPLAFTSSSKVCKPTSSSSSSIEQHIEIHTNTSQKFRYSRASPSVRWPNLKLTE 60

Query: 61   SFQLPSQTHFTVPSP-WQTHVVDESEASVRTQNSEI-------EDELESVGMASDETREV 120
            SFQLPSQTHFT P P  QTH+VDESE S RTQ SEI       EDELES  M SDET+EV
Sbjct: 61   SFQLPSQTHFTAPPPSSQTHMVDESEVSPRTQTSEIRDGSSVEEDELESSRMVSDETQEV 120

Query: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFC 180
            LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALK DEFVADVLDDRKVQMTPTDFC
Sbjct: 121  LGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKPDEFVADVLDDRKVQMTPTDFC 180

Query: 181  FVVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPA 240
            FVVKWVGRSNW RALEVYEWLNLRHWYSPNARMLATILAVLGKANQE LAVEIFTRSEPA
Sbjct: 181  FVVKWVGRSNWQRALEVYEWLNLRHWYSPNARMLATILAVLGKANQETLAVEIFTRSEPA 240

Query: 241  IGNTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNL 300
            IGNTVQVYNAMMGVYARNGRFV VQELLDLMR RGCEPDLVSFNTLINARMKSGPMTPNL
Sbjct: 241  IGNTVQVYNAMMGVYARNGRFVLVQELLDLMRKRGCEPDLVSFNTLINARMKSGPMTPNL 300

Query: 301  SLQFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMIS 360
            SLQFLNEVRKSG+RPDIITYNTLISACSRESNLEEAMKVYNDMERHNC PDLWTYNAMIS
Sbjct: 301  SLQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCLPDLWTYNAMIS 360

Query: 361  VYGRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGK 420
            VYGRCGLASRA+QLF ELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMV+NGFGK
Sbjct: 361  VYGRCGLASRAEQLFMELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVSNGFGK 420

Query: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIM 480
            DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDE+TYT+LIDSLGKSSK+EEA NIM
Sbjct: 421  DEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEITYTILIDSLGKSSKIEEAGNIM 480

Query: 481  TEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRF 540
            TEMLDSGVKPTLRTYSALICGYGK GKPVEAEK FDCMLRSGIRPDYLAYSVMIDLFLRF
Sbjct: 481  TEMLDSGVKPTLRTYSALICGYGKVGKPVEAEKIFDCMLRSGIRPDYLAYSVMIDLFLRF 540

Query: 541  NETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLS 600
            NETKKAMLLYKEMV DGLTPDGALYEVMLRNLVKE KLDDIDKV+RDMQE+CG+NPQ +S
Sbjct: 541  NETKKAMLLYKEMVCDGLTPDGALYEVMLRNLVKENKLDDIDKVVRDMQEECGMNPQAIS 600

Query: 601  SILIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTSN 660
            S+LIKGECY HAAKMLR+A++TGYDLD+ENLLSILSTYSLSGRHLEACELLEFLKE+TSN
Sbjct: 601  SVLIKGECYGHAAKMLRVAIETGYDLDNENLLSILSTYSLSGRHLEACELLEFLKEKTSN 660

Query: 661  SNQLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIAS 720
            SNQLVTESLIVVLCK KQIDAALVEYGN  R F SYGT+SL+YECLIQGCQEKELFD AS
Sbjct: 661  SNQLVTESLIVVLCKTKQIDAALVEYGNMKRVFGSYGTSSLMYECLIQGCQEKELFDTAS 720

Query: 721  HIFSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIEA 780
            HIFSDMMFYGVKIS+ LYQVM+LMYCK GYPEIAHYLLERAELEG+V+DDVSTYV+II++
Sbjct: 721  HIFSDMMFYGVKISDKLYQVMILMYCKRGYPEIAHYLLERAELEGIVVDDVSTYVEIIDS 780

Query: 781  YGELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPT 840
            +GELKLWQKAESLVGN+RLKLA +DRKIWNALIQAYAK GCYERARAVFNTMMRDGPSPT
Sbjct: 781  FGELKLWQKAESLVGNMRLKLAAVDRKIWNALIQAYAKCGCYERARAVFNTMMRDGPSPT 840

Query: 841  VNSINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900
            V SINGLLQALI DNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH
Sbjct: 841  VISINGLLQALIADNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYH 900

Query: 901  GMKAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGVE 960
            GMKAAGYLPTMHLYRSMI LLC GKRVRDVEAMLSEMEEAGFKPDL ILNSVI+LYVGVE
Sbjct: 901  GMKAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLSEMEEAGFKPDLFILNSVIKLYVGVE 960

Query: 961  DFRNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020
            DF+NASR Y LI ETGLTPD+DTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK
Sbjct: 961  DFKNASRVYHLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYK 1020

Query: 1021 SLISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKET 1080
            SLISALSKRQLVEEAEELFEELR +G KLDRFFYHVMMKM+RN+GNHLKAE LLVMMKE+
Sbjct: 1021 SLISALSKRQLVEEAEELFEELRGSGYKLDRFFYHVMMKMFRNTGNHLKAESLLVMMKES 1080

Query: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDAYLRNGDYNGG 1140
            GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGM+LDTLPYSSVIDAYLRN DY+GG
Sbjct: 1081 GIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRDYSGG 1140

Query: 1141 IQKLMGMKADGIEPDYRIWTCFIRAASLSESTTEAIIILNALRDTGFDLPIRLLTEKSGS 1200
            IQKLM MKADGIEPDYRIWTCFIRAASLSES++EAIIILNAL+DTGFDLPIRLLT+KSG+
Sbjct: 1141 IQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQDTGFDLPIRLLTQKSGT 1200

Query: 1201 LVLEVDQYLEKLVAMEDDDAAFNFVNALEDLLWAFELRATASWIFQLAIKRNIFRQDIFR 1260
            L+LEVDQ+LEKL A+EDDDAAFNFVNALEDLLWAFELRATASW+FQLAIKR+I+RQDIFR
Sbjct: 1201 LILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRSIYRQDIFR 1260

Query: 1261 VADKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGMAEYNMVSLNS 1320
            VADKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITG AEYNM+SLNS
Sbjct: 1261 VADKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGTAEYNMISLNS 1320

Query: 1321 TLKVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPELNSMKLI 1380
            TLKVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPE NSMK+I
Sbjct: 1321 TLKVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPEFNSMKVI 1380

Query: 1381 DGCFIRRGLVSAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKM 1440
            +GCFIRRGLV AFKDIT RLGFVRPKKFSRLALLPDEKRDKVI+ADLEGRKEKLEKVK++
Sbjct: 1381 NGCFIRRGLVPAFKDITGRLGFVRPKKFSRLALLPDEKRDKVIEADLEGRKEKLEKVKQL 1440

Query: 1441 IKSGKVRRITKIKRRTYYRSLDAMKK 1459
            I+SGK +RITKIK+R YYR LDA+KK
Sbjct: 1441 IESGKAKRITKIKKRAYYRRLDALKK 1466

[Close]

BLAST of Lcy02g011080 vs. NCBI nr
Match: XP_022958253.1 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucurbita moschata] >XP_022958254.1 pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucurbita moschata])

HSP 1 Score: 2682.9 bits (6953), Expect = 0.0e+00
Identity = 1360/1465 (92.83%), Postives = 1411/1465 (96.31%), Query Frame = 0


Query: 1    MACSAVLPLAFASSSKVCRPTSASSSSIEQQSEINTNTTQKFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLAFASSSKVC+PTSASS    +QSE NTNT+Q+FRYSRASPSVRWPNLKLTE
Sbjct: 1    MACSAVLPLAFASSSKVCKPTSASSI---EQSETNTNTSQQFRYSRASPSVRWPNLKLTE 60

Query: 61   SFQLPSQTHFTVPSPWQTHVVDESEASVRTQNSEI------EDELESVGMASDETREVLG 120
            SFQ PSQT FTV SP QTH VDESE S+RTQNSEI      EDELES+ M SDET+EVLG
Sbjct: 61   SFQPPSQTQFTVSSPSQTHGVDESEVSIRTQNSEIRDGDFVEDELESMVMVSDETQEVLG 120

Query: 121  RPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV 180
            RPSKTRVKKM KLALKRAKDWRERVQ LTDRILALKQDEFVADVLDDRKVQMTPTDFCFV
Sbjct: 121  RPSKTRVKKMTKLALKRAKDWRERVQLLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV 180

Query: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAIG 240
            VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSE AIG
Sbjct: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSESAIG 240

Query: 241  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSL 300
            NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNT+INARMKSGPM+PNL L
Sbjct: 241  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTMINARMKSGPMSPNLCL 300

Query: 301  QFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360
            QFLNEVRKSG+RPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY
Sbjct: 301  QFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360

Query: 361  GRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDE 420
            GRCGLASRA+QLFKEL SKGFFPDAVTYNSLLYAFAREGN EKVKEICEEMV+NGFGKDE
Sbjct: 361  GRCGLASRAEQLFKELASKGFFPDAVTYNSLLYAFAREGNEEKVKEICEEMVSNGFGKDE 420

Query: 421  MTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTE 480
            MTYNT+IHMYGKQEQHDLAFQLYRDMKLSGR PDEVTYTVLIDSLGKSSK+EEAAN+MTE
Sbjct: 421  MTYNTMIHMYGKQEQHDLAFQLYRDMKLSGRTPDEVTYTVLIDSLGKSSKIEEAANVMTE 480

Query: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNE 540
            MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPD LAYSVMIDLFLRFNE
Sbjct: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDCLAYSVMIDLFLRFNE 540

Query: 541  TKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSI 600
            TKKAM LY++MVRDGLTPDGALYEVMLRNL KE KLD+IDKVI DMQE+CGLNPQV+SSI
Sbjct: 541  TKKAMFLYRKMVRDGLTPDGALYEVMLRNLRKENKLDEIDKVISDMQERCGLNPQVISSI 600

Query: 601  LIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTSNSN 660
            L+K ECYDHAAKMLRLA+DTGYDLDHE LLSILSTYSLSGRHLEACELLEFLKE+TSNSN
Sbjct: 601  LVKEECYDHAAKMLRLAIDTGYDLDHETLLSILSTYSLSGRHLEACELLEFLKEKTSNSN 660

Query: 661  QLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIASHI 720
            QLVTES+IVVLCKAKQIDAALVEY NTTRGF S+GT+S+VYECL+QGCQEKELFDIASHI
Sbjct: 661  QLVTESMIVVLCKAKQIDAALVEYDNTTRGFGSFGTSSIVYECLLQGCQEKELFDIASHI 720

Query: 721  FSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIEAYG 780
            FSDMMFYGVKISE+LYQVMMLM+CKTGYPEIAHYLLERAELEGV++DDVSTYV IIEAYG
Sbjct: 721  FSDMMFYGVKISESLYQVMMLMHCKTGYPEIAHYLLERAELEGVIVDDVSTYVNIIEAYG 780

Query: 781  ELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTVN 840
            ELKLWQKAESLVG L+LKLATIDRKIWNALIQAYAKSGCYERARAVFNTMM +GPSP+VN
Sbjct: 781  ELKLWQKAESLVGKLKLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMCNGPSPSVN 840

Query: 841  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHGM 900
            SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSS+LLMLDAFARDGNIFEVKKIYHGM
Sbjct: 841  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSILLMLDAFARDGNIFEVKKIYHGM 900

Query: 901  KAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGVEDF 960
            KAAGYLPTMHLYRSMI LLC GKRVRDVEAML EMEEAGFKPDLSILNSVI+LYVGVEDF
Sbjct: 901  KAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLLEMEEAGFKPDLSILNSVIKLYVGVEDF 960

Query: 961  RNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020
            RNASR YQLIQETGLTPD+DTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL
Sbjct: 961  RNASRMYQLIQETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020

Query: 1021 ISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKETGI 1080
            ISALSKRQLVEEAEELFEELRS GCKLDRFFYHVMMKM+RN+GNHLKAERLLVMMKE+GI
Sbjct: 1021 ISALSKRQLVEEAEELFEELRSNGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESGI 1080

Query: 1081 DPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDAYLRNGDYNGGIQ 1140
            +PTVATMHLLMVSYGSSGHPKEAE+VLNDLKATGMNLDTLPYSSVIDAYLR GDYNGGI+
Sbjct: 1081 EPTVATMHLLMVSYGSSGHPKEAEQVLNDLKATGMNLDTLPYSSVIDAYLRKGDYNGGIE 1140

Query: 1141 KLMGMKADGIEPDYRIWTCFIRAASLSESTTEAIIILNALRDTGFDLPIRLLTEKSGSLV 1200
            KLM MKADGIEPDYRIWTCFIRAASLSE T EAIIILNALRDTGFDLPIRLLTEKS SLV
Sbjct: 1141 KLMEMKADGIEPDYRIWTCFIRAASLSEGTGEAIIILNALRDTGFDLPIRLLTEKSQSLV 1200

Query: 1201 LEVDQYLEKLVAMEDDDAAFNFVNALEDLLWAFELRATASWIFQLAIKRNIFRQDIFRVA 1260
            LEVDQ LEKL AMEDDDAAFNFVNALEDLLWAFELRATASW+FQLAIKRNI+RQDIFRVA
Sbjct: 1201 LEVDQCLEKLGAMEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRNIYRQDIFRVA 1260

Query: 1261 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGMAEYNMVSLNSTL 1320
            DKDWGADFRKLSAGSALVALTLWLDHMQDASLQG PESPKSVVLITG AEYNMVSLNSTL
Sbjct: 1261 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGCPESPKSVVLITGSAEYNMVSLNSTL 1320

Query: 1321 KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPELNSMKLIDG 1380
            KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFC DLELKDAPALPELNSMKLIDG
Sbjct: 1321 KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCSDLELKDAPALPELNSMKLIDG 1380

Query: 1381 CFIRRGLVSAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIK 1440
            CFIRRGLV AFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIK
Sbjct: 1381 CFIRRGLVPAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIK 1440

Query: 1441 SGKVRRITKIKRRTYYRSLDAMKKN 1460
            SGKVRRIT+IK+RTY+RSL+A+KKN
Sbjct: 1441 SGKVRRITRIKKRTYHRSLNAVKKN 1462

[Close]

BLAST of Lcy02g011080 vs. NCBI nr
Match: KAG7035564.1 (Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2680.6 bits (6947), Expect = 0.0e+00
Identity = 1359/1465 (92.76%), Postives = 1410/1465 (96.25%), Query Frame = 0


Query: 1    MACSAVLPLAFASSSKVCRPTSASSSSIEQQSEINTNTTQKFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLAFASSSKVC+PTSASS    +QSE NTNTTQ+FRYSRASPSVRWPNLKLTE
Sbjct: 1    MACSAVLPLAFASSSKVCKPTSASSI---EQSETNTNTTQQFRYSRASPSVRWPNLKLTE 60

Query: 61   SFQLPSQTHFTVPSPWQTHVVDESEASVRTQNSEI------EDELESVGMASDETREVLG 120
            SFQ PSQT FTV SP QTH VDESE S+RTQNSEI      EDELES+ M SDET+EVLG
Sbjct: 61   SFQPPSQTQFTVSSPSQTHGVDESEVSIRTQNSEIRDGDFVEDELESMVMVSDETQEVLG 120

Query: 121  RPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV 180
            RPSKTRVK+M KLALKRAKDWRERVQ LTDRILALKQDEFVADVLDDRKVQMTPTDFCFV
Sbjct: 121  RPSKTRVKRMTKLALKRAKDWRERVQLLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV 180

Query: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAIG 240
            VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSE AIG
Sbjct: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSESAIG 240

Query: 241  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSL 300
            NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNT+INARMKSGPMTPNL L
Sbjct: 241  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTMINARMKSGPMTPNLCL 300

Query: 301  QFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360
            QFLNEVRKSG+RPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY
Sbjct: 301  QFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360

Query: 361  GRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDE 420
            GRCGLASRA+QLFKEL SKGFFPDAVTYNSLLYAFAREGN EKVKEICEEMV+NGFGKDE
Sbjct: 361  GRCGLASRAEQLFKELASKGFFPDAVTYNSLLYAFAREGNKEKVKEICEEMVSNGFGKDE 420

Query: 421  MTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTE 480
            MTYNT+IHMYGKQEQHDLAFQLYRDMKLSGR PDEVTYTVLIDSLGKSSK+EEAAN+MTE
Sbjct: 421  MTYNTMIHMYGKQEQHDLAFQLYRDMKLSGRTPDEVTYTVLIDSLGKSSKIEEAANVMTE 480

Query: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNE 540
            MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPD LAYSVMIDLFLRFNE
Sbjct: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDCLAYSVMIDLFLRFNE 540

Query: 541  TKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSI 600
            TKKAM LY++MVRDGLTPDGALYEVMLRNL KE KLD+IDKVI DMQE+CGLNPQV+SSI
Sbjct: 541  TKKAMFLYRKMVRDGLTPDGALYEVMLRNLRKENKLDEIDKVISDMQERCGLNPQVISSI 600

Query: 601  LIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTSNSN 660
            L+K ECYDHAAKMLRLA+DTGYDLDHE LLSILSTYSLSGRHLEACELLEFLKE+TSNSN
Sbjct: 601  LVKEECYDHAAKMLRLAIDTGYDLDHETLLSILSTYSLSGRHLEACELLEFLKEKTSNSN 660

Query: 661  QLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIASHI 720
            QLVTES+IVVLCKAKQIDAALVEY NTTRGF S+GT+S+VYECL+QGCQEKELFDIASHI
Sbjct: 661  QLVTESMIVVLCKAKQIDAALVEYDNTTRGFGSFGTSSIVYECLLQGCQEKELFDIASHI 720

Query: 721  FSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIEAYG 780
            FSDMMFYGVKISE+LY+VMMLM+CKTGYPEIAHYLLERAELEGV++DDVSTYV IIEAYG
Sbjct: 721  FSDMMFYGVKISESLYRVMMLMHCKTGYPEIAHYLLERAELEGVIVDDVSTYVNIIEAYG 780

Query: 781  ELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTVN 840
            ELKLWQKAESLVG L+LKLATIDRKIWNALIQAYAKSGCYERARAVFNTMM +GPSP+VN
Sbjct: 781  ELKLWQKAESLVGKLKLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMCNGPSPSVN 840

Query: 841  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHGM 900
            SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSS+LLMLDAFARDGNIFEVKKIYHGM
Sbjct: 841  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSILLMLDAFARDGNIFEVKKIYHGM 900

Query: 901  KAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGVEDF 960
            KAAGYLPTMHLYRSMI LLC GKRVRDVEAML EMEEAGFKPDLSILNSVI+LYVGVEDF
Sbjct: 901  KAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLLEMEEAGFKPDLSILNSVIKLYVGVEDF 960

Query: 961  RNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020
            RNASR YQLI ETGLTPD+DTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL
Sbjct: 961  RNASRMYQLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020

Query: 1021 ISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKETGI 1080
            ISALSKRQLVEEAEELFEELRS GCKLDRFFYHVMMKM+RN+GNHLKAERLLVMMKE+GI
Sbjct: 1021 ISALSKRQLVEEAEELFEELRSNGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESGI 1080

Query: 1081 DPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDAYLRNGDYNGGIQ 1140
            +PTVATMHLLMVSYGSSGHPKEAE+VLNDLKATGMNLDTLPYSSVIDAYLR GDYNGGI+
Sbjct: 1081 EPTVATMHLLMVSYGSSGHPKEAEQVLNDLKATGMNLDTLPYSSVIDAYLRKGDYNGGIE 1140

Query: 1141 KLMGMKADGIEPDYRIWTCFIRAASLSESTTEAIIILNALRDTGFDLPIRLLTEKSGSLV 1200
            KLM MKADGIEPDYRIWTCFIRAASLSE T EAIIILNALRDTGFDLPIRLLTEKS SLV
Sbjct: 1141 KLMEMKADGIEPDYRIWTCFIRAASLSEGTGEAIIILNALRDTGFDLPIRLLTEKSQSLV 1200

Query: 1201 LEVDQYLEKLVAMEDDDAAFNFVNALEDLLWAFELRATASWIFQLAIKRNIFRQDIFRVA 1260
            LEVDQ LEKL AMEDDDAAFNFVNALEDLLWAFELRATASW+FQLAIKRNI+RQDIFRVA
Sbjct: 1201 LEVDQCLEKLGAMEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRNIYRQDIFRVA 1260

Query: 1261 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGMAEYNMVSLNSTL 1320
            DKDWGADFRKLSAGSALVALTLWLDHMQDASLQG PESPKSVVLITG AEYNMVSLNSTL
Sbjct: 1261 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGCPESPKSVVLITGSAEYNMVSLNSTL 1320

Query: 1321 KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPELNSMKLIDG 1380
            KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFC DLELKDAPALPELNSMKLIDG
Sbjct: 1321 KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCSDLELKDAPALPELNSMKLIDG 1380

Query: 1381 CFIRRGLVSAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIK 1440
            CFIRRGLV AFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIK
Sbjct: 1381 CFIRRGLVPAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIK 1440

Query: 1441 SGKVRRITKIKRRTYYRSLDAMKKN 1460
            SGKVRRIT+IK+RTY+RSL+A+KKN
Sbjct: 1441 SGKVRRITRIKKRTYHRSLNAVKKN 1462

[Close]

BLAST of Lcy02g011080 vs. NCBI nr
Match: XP_022995470.1 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucurbita maxima] >XP_022995471.1 pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucurbita maxima] >XP_022995472.1 pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucurbita maxima])

HSP 1 Score: 2677.9 bits (6940), Expect = 0.0e+00
Identity = 1356/1465 (92.56%), Postives = 1411/1465 (96.31%), Query Frame = 0


Query: 1    MACSAVLPLAFASSSKVCRPTSASSSSIEQQSEINTNTTQKFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLAFASSSKVC+PTSASS    +QSEINTNT+Q+FRYSRASPSVRWPNLKLTE
Sbjct: 50   MACSAVLPLAFASSSKVCKPTSASSI---EQSEINTNTSQQFRYSRASPSVRWPNLKLTE 109

Query: 61   SFQLPSQTHFTVPSPWQTHVVDESEASVRTQNSEI------EDELESVGMASDETREVLG 120
            SFQ PSQT FTVPSP QTH  DESE S+RTQNSEI      EDE ES+ M SDET+EVLG
Sbjct: 110  SFQPPSQTQFTVPSPSQTHGFDESEVSIRTQNSEIRDGDFVEDEFESMVMVSDETQEVLG 169

Query: 121  RPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV 180
            RPSKTRVKKM KLALKRAKDWRERVQFLTD+ILALKQDEFVADVLDDRKVQMTPTDFCFV
Sbjct: 170  RPSKTRVKKMTKLALKRAKDWRERVQFLTDKILALKQDEFVADVLDDRKVQMTPTDFCFV 229

Query: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAIG 240
            VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSE  IG
Sbjct: 230  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSESVIG 289

Query: 241  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSL 300
            NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNT+INARMKSG MTPNL L
Sbjct: 290  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTMINARMKSGSMTPNLCL 349

Query: 301  QFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360
            QFLNEVRKSG+RPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY
Sbjct: 350  QFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 409

Query: 361  GRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDE 420
            GRCGLASRA+QLFKEL SKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMV+NGFGKDE
Sbjct: 410  GRCGLASRAEQLFKELASKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVSNGFGKDE 469

Query: 421  MTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTE 480
            MTYNTIIHMYGKQE+HDLAFQLYRDMKLSGR PDEVTYTVLIDSLGKSSK+EEAANIMTE
Sbjct: 470  MTYNTIIHMYGKQEKHDLAFQLYRDMKLSGRTPDEVTYTVLIDSLGKSSKIEEAANIMTE 529

Query: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNE 540
            MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPD LAYSVMIDLFLRFNE
Sbjct: 530  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDCLAYSVMIDLFLRFNE 589

Query: 541  TKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSI 600
            TKKAM LY++M+RDGLTPDGALYEVMLRNL KE KLD+ID+VI DMQE+C LNPQV+SSI
Sbjct: 590  TKKAMFLYRKMLRDGLTPDGALYEVMLRNLRKENKLDEIDRVISDMQERCDLNPQVISSI 649

Query: 601  LIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTSNSN 660
            L+K ECYDHAAKMLRLA+DTGYDLDHE LLSILSTYSLSGRHLEACELLEFLKERTSNSN
Sbjct: 650  LVKEECYDHAAKMLRLAIDTGYDLDHETLLSILSTYSLSGRHLEACELLEFLKERTSNSN 709

Query: 661  QLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIASHI 720
            QLVTES+IVVLCKAKQIDAALVEY NTTRGF S+GT+S+VYECL+QGCQEKELFDIASHI
Sbjct: 710  QLVTESMIVVLCKAKQIDAALVEYDNTTRGFGSFGTSSIVYECLLQGCQEKELFDIASHI 769

Query: 721  FSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIEAYG 780
            FSDMMFYGVKISE+LYQVMMLM+CKTGYPEIAHYLLERAELEGV++DDVST VKIIEAYG
Sbjct: 770  FSDMMFYGVKISESLYQVMMLMHCKTGYPEIAHYLLERAELEGVIVDDVSTCVKIIEAYG 829

Query: 781  ELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTVN 840
            ELKLWQKAESLVG L+LKLATIDRKIWNALIQAYAKSGCYERARAVFNTMM +GPSP+VN
Sbjct: 830  ELKLWQKAESLVGKLKLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMCNGPSPSVN 889

Query: 841  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHGM 900
            SINGLLQALIVDNRLKELYVVVQELQDMGFK+SKSS+LLMLDAFARDGNIFEVKKIYHGM
Sbjct: 890  SINGLLQALIVDNRLKELYVVVQELQDMGFKVSKSSILLMLDAFARDGNIFEVKKIYHGM 949

Query: 901  KAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGVEDF 960
            KAAGYLPTMHLYRSMI LLC GKRVRDVEAML EMEEAGFKPDLSILNSVI+LYVGVEDF
Sbjct: 950  KAAGYLPTMHLYRSMIALLCNGKRVRDVEAMLLEMEEAGFKPDLSILNSVIKLYVGVEDF 1009

Query: 961  RNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020
            RNASR YQLIQETGLTPD+DTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL
Sbjct: 1010 RNASRMYQLIQETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1069

Query: 1021 ISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKETGI 1080
            ISALSKRQLVEEAEELFEELRS GCKLDRFFYHVMMKM+RN+GNHLKAERLLVMMKE+GI
Sbjct: 1070 ISALSKRQLVEEAEELFEELRSNGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESGI 1129

Query: 1081 DPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDAYLRNGDYNGGIQ 1140
            DPTVATMHLLMVSYGSSGHPKEAE+VLNDLKATGMNLDTLPYSSVIDAYLRNGDY GGIQ
Sbjct: 1130 DPTVATMHLLMVSYGSSGHPKEAEQVLNDLKATGMNLDTLPYSSVIDAYLRNGDYKGGIQ 1189

Query: 1141 KLMGMKADGIEPDYRIWTCFIRAASLSESTTEAIIILNALRDTGFDLPIRLLTEKSGSLV 1200
            KL+ MKADGIEPDYRIWTCFIRAASLSEST EAIIILNAL+DTGFDLPIRLLTEKS SLV
Sbjct: 1190 KLVEMKADGIEPDYRIWTCFIRAASLSESTGEAIIILNALQDTGFDLPIRLLTEKSQSLV 1249

Query: 1201 LEVDQYLEKLVAMEDDDAAFNFVNALEDLLWAFELRATASWIFQLAIKRNIFRQDIFRVA 1260
            LEVDQ LEKL AMEDDDAAFNFVNALEDLLWAFELRATASW+FQLAIKRNI+RQDIFRVA
Sbjct: 1250 LEVDQCLEKLGAMEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRNIYRQDIFRVA 1309

Query: 1261 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGMAEYNMVSLNSTL 1320
            DKDWGADFRKLSAGSALVALTLWLDHMQDASLQG PESPKSVVLITG AEYNMVSLNSTL
Sbjct: 1310 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGCPESPKSVVLITGSAEYNMVSLNSTL 1369

Query: 1321 KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPELNSMKLIDG 1380
            KVCLWEMGSPFLPCRTRSGLL+AK+HSLRMWLKDSSFC DLELKDAPALPELNSMKLIDG
Sbjct: 1370 KVCLWEMGSPFLPCRTRSGLLVAKSHSLRMWLKDSSFCSDLELKDAPALPELNSMKLIDG 1429

Query: 1381 CFIRRGLVSAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIK 1440
            CFIRRGLV AFKDITERLGFVRPKKFSRLALLPDEKRD+VIKADLEGRKEKLEKVKKMIK
Sbjct: 1430 CFIRRGLVPAFKDITERLGFVRPKKFSRLALLPDEKRDRVIKADLEGRKEKLEKVKKMIK 1489

Query: 1441 SGKVRRITKIKRRTYYRSLDAMKKN 1460
            SGKVRRIT+IK+RTY+RSL+A+KKN
Sbjct: 1490 SGKVRRITRIKKRTYHRSLNAVKKN 1511

[Close]

BLAST of Lcy02g011080 vs. NCBI nr
Match: XP_038901451.1 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 [Benincasa hispida] >XP_038901452.1 pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 [Benincasa hispida] >XP_038901453.1 pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 [Benincasa hispida] >XP_038901454.1 pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 2675.2 bits (6933), Expect = 0.0e+00
Identity = 1352/1465 (92.29%), Postives = 1407/1465 (96.04%), Query Frame = 0


Query: 1    MACSAVLPLAFASSSKVCRPTSA-SSSSIEQQSEINTNTTQKFRYSRASPSVRWPNLKLT 60
            MACSAVLPLA ASSSKVC+PTSA SSSSIEQQSEI+ NTTQ FRYSRASPSVRWPNLKLT
Sbjct: 1    MACSAVLPLAVASSSKVCKPTSASSSSSIEQQSEIHANTTQNFRYSRASPSVRWPNLKLT 60

Query: 61   ESFQLPSQTHFTVPSPWQTHVVDESEASVRTQNSEI------EDELESVGMASDETREVL 120
            ESFQLPSQTHFT PSP QTH+VDESE S+RTQNSEI      EDE ES  M  DETREVL
Sbjct: 61   ESFQLPSQTHFTAPSPSQTHMVDESEVSLRTQNSEIRDGSYVEDESESSRMVGDETREVL 120

Query: 121  GRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCF 180
            GRP+KTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCF
Sbjct: 121  GRPNKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCF 180

Query: 181  VVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAI 240
            VVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAI
Sbjct: 181  VVKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAI 240

Query: 241  GNTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLS 300
            GNTVQVYNAMMGVYARNGRF+ VQELLDLMR RGCEPDLVSFNTLINARMKSGPMTPNLS
Sbjct: 241  GNTVQVYNAMMGVYARNGRFILVQELLDLMRKRGCEPDLVSFNTLINARMKSGPMTPNLS 300

Query: 301  LQFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISV 360
            LQFLNEVRKSG+RPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISV
Sbjct: 301  LQFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISV 360

Query: 361  YGRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKD 420
            YGRCGLA++A+QLFKELESKGFFPDAVTYNSLLYAFAREGNV+KVKEICEEMV+NGFGKD
Sbjct: 361  YGRCGLANKAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVKKVKEICEEMVSNGFGKD 420

Query: 421  EMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMT 480
            EMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSS++EEAANIMT
Sbjct: 421  EMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSRIEEAANIMT 480

Query: 481  EMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFN 540
            EMLDSGVKPTL+TYSALICGYGKAGKPVEAE TFDCMLRSGIRPDYLAYSVMIDLFLRFN
Sbjct: 481  EMLDSGVKPTLKTYSALICGYGKAGKPVEAETTFDCMLRSGIRPDYLAYSVMIDLFLRFN 540

Query: 541  ETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLSS 600
            ETKKAMLLYKEMVRDGL PDGALYEVMLRNLVKE KLDDIDKVIRDMQEQCG+NPQV+SS
Sbjct: 541  ETKKAMLLYKEMVRDGLIPDGALYEVMLRNLVKENKLDDIDKVIRDMQEQCGMNPQVISS 600

Query: 601  ILIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTSNS 660
            IL+KGECY HA+ MLRLA+DTG +LD ENLLSILSTYSLSGRHLEACELLEFLKE+TSNS
Sbjct: 601  ILLKGECYGHASTMLRLAIDTGCELDDENLLSILSTYSLSGRHLEACELLEFLKEKTSNS 660

Query: 661  NQLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIASH 720
            NQLV ESLIVVLCKAKQIDAALVEYGNTTRGF S+GT+SL+YECLIQGCQEKELF  ASH
Sbjct: 661  NQLVVESLIVVLCKAKQIDAALVEYGNTTRGFGSHGTSSLMYECLIQGCQEKELFHTASH 720

Query: 721  IFSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIEAY 780
            IFSDMMF GVKISENLYQVMM M+CK GYP+ AHYLLERAELEGVV+DDVSTYV+II+AY
Sbjct: 721  IFSDMMFCGVKISENLYQVMMHMHCKIGYPDTAHYLLERAELEGVVVDDVSTYVEIIDAY 780

Query: 781  GELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTV 840
            GELKLWQKAESLVGN RLKLA IDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTV
Sbjct: 781  GELKLWQKAESLVGNARLKLAIIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTV 840

Query: 841  NSINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHG 900
             SINGLLQALI DNRLKELY VVQELQDMGFKISKSSVLLMLDAF+RDGNIFEVKKIYHG
Sbjct: 841  ISINGLLQALIADNRLKELYAVVQELQDMGFKISKSSVLLMLDAFSRDGNIFEVKKIYHG 900

Query: 901  MKAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGVED 960
            MKAAGYLPTMHLYRSM+ LLC GKRVRDVEA+LSEMEEAGFKPDLSILNSVI+LYVGVED
Sbjct: 901  MKAAGYLPTMHLYRSMVALLCKGKRVRDVEAILSEMEEAGFKPDLSILNSVIKLYVGVED 960

Query: 961  FRNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKS 1020
            FRNASR Y LI ETGLTPD+DTYNSLI MYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKS
Sbjct: 961  FRNASRVYHLILETGLTPDEDTYNSLITMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKS 1020

Query: 1021 LISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKETG 1080
            LISALSK+QLVEEAEELFEELR++GCKLDRFFYHVMMKM+RN+GNHLKAERLLVMMKE+G
Sbjct: 1021 LISALSKKQLVEEAEELFEELRASGCKLDRFFYHVMMKMFRNTGNHLKAERLLVMMKESG 1080

Query: 1081 IDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDAYLRNGDYNGGI 1140
            IDPTVATMHLLMVSYGSSGHPKEAEKV NDLKATGMNLDTLPYSSVIDAYLRN DY+GGI
Sbjct: 1081 IDPTVATMHLLMVSYGSSGHPKEAEKVFNDLKATGMNLDTLPYSSVIDAYLRNKDYSGGI 1140

Query: 1141 QKLMGMKADGIEPDYRIWTCFIRAASLSESTTEAIIILNALRDTGFDLPIRLLTEKSGSL 1200
            QKLM MKADGIEPDYRIWTCFIRAASLSEST+EAIIIL ALRDTGFDLPIRLLT+KSGSL
Sbjct: 1141 QKLMAMKADGIEPDYRIWTCFIRAASLSESTSEAIIILTALRDTGFDLPIRLLTQKSGSL 1200

Query: 1201 VLEVDQYLEKLVAMEDDDAAFNFVNALEDLLWAFELRATASWIFQLAIKRNIFRQDIFRV 1260
            +LEVDQ+LEKL  +EDDDA FNFVNALEDLLWAFELRATASW+FQLAIKR+I+R+DIFRV
Sbjct: 1201 ILEVDQFLEKLGVLEDDDATFNFVNALEDLLWAFELRATASWVFQLAIKRSIYRKDIFRV 1260

Query: 1261 ADKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGMAEYNMVSLNST 1320
            ADKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITG AEYNMVSLNST
Sbjct: 1261 ADKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGTAEYNMVSLNST 1320

Query: 1321 LKVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPELNSMKLID 1380
            LKVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPELNSMKLID
Sbjct: 1321 LKVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPELNSMKLID 1380

Query: 1381 GCFIRRGLVSAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMI 1440
            GCFIRRGLV AFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVK++I
Sbjct: 1381 GCFIRRGLVPAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKQII 1440

Query: 1441 KSGKVRRITKIKRRTYYRSLDAMKK 1459
            KSGKVRRI KIK+R YYR LDA+KK
Sbjct: 1441 KSGKVRRIRKIKKRAYYRRLDAVKK 1465

[Close]

BLAST of Lcy02g011080 vs. NCBI nr
Match: XP_023533489.1 (pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023533490.1 pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2666.0 bits (6909), Expect = 0.0e+00
Identity = 1353/1465 (92.35%), Postives = 1407/1465 (96.04%), Query Frame = 0


Query: 1    MACSAVLPLAFASSSKVCRPTSASSSSIEQQSEINTNTTQKFRYSRASPSVRWPNLKLTE 60
            MACSAVLPLAFASSSKVC+PTSASS    +QSE NTNT+Q+FRYSRASPSVRWPNLKLTE
Sbjct: 1    MACSAVLPLAFASSSKVCKPTSASSI---EQSETNTNTSQQFRYSRASPSVRWPNLKLTE 60

Query: 61   SFQLPSQTHFTVPSPWQTHVVDESEASVRTQNSEI------EDELESVGMASDETREVLG 120
            SFQ PSQT FTV SP QTH VDESE S+RTQNSEI      EDELES+ M SDET+EVLG
Sbjct: 61   SFQPPSQTQFTVSSPSQTHGVDESEVSIRTQNSEIRDGDFVEDELESMVMVSDETQEVLG 120

Query: 121  RPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV 180
            RPSKTRVKKM KLALKRAKDWRERVQ LTDRILALKQDEFVADVLDDRKVQMTPTDFCFV
Sbjct: 121  RPSKTRVKKMTKLALKRAKDWRERVQLLTDRILALKQDEFVADVLDDRKVQMTPTDFCFV 180

Query: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAIG 240
            VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSE AIG
Sbjct: 181  VKWVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSESAIG 240

Query: 241  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSL 300
            NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNT+INARMKSGPMTPNL L
Sbjct: 241  NTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTMINARMKSGPMTPNLCL 300

Query: 301  QFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360
            QFLNEVRKSG+RPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY
Sbjct: 301  QFLNEVRKSGVRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 360

Query: 361  GRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDE 420
            GRCGLASRA+QLFKEL SKGFFPDAVTYNSLLYAFAREGN EKVKEICEEMV+NGFGKDE
Sbjct: 361  GRCGLASRAEQLFKELASKGFFPDAVTYNSLLYAFAREGNEEKVKEICEEMVSNGFGKDE 420

Query: 421  MTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTE 480
            MTYNT+IHMYGKQEQHDLAFQLYRDMKLSGR PDEVTYTVLIDSLGKSSK+EEAAN+MTE
Sbjct: 421  MTYNTMIHMYGKQEQHDLAFQLYRDMKLSGRTPDEVTYTVLIDSLGKSSKIEEAANVMTE 480

Query: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNE 540
            MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPD LAYSVMIDLFLRFNE
Sbjct: 481  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDCLAYSVMIDLFLRFNE 540

Query: 541  TKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSI 600
            TKKAM LY++MVRDGLTPDGALYEVMLRNL KE KLD+IDKVI DMQE+CGLNPQV+SSI
Sbjct: 541  TKKAMFLYRKMVRDGLTPDGALYEVMLRNLRKENKLDEIDKVISDMQERCGLNPQVISSI 600

Query: 601  LIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTSNSN 660
            L+K ECYDHAAKMLRLA+DTGYDLDHE LLSILSTYSLSGRHLEACELLEFLK++TSNSN
Sbjct: 601  LVKEECYDHAAKMLRLAIDTGYDLDHETLLSILSTYSLSGRHLEACELLEFLKDKTSNSN 660

Query: 661  QLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIASHI 720
            QLVTES+IVVLCKAKQIDAALVEYGN    F S+GT+S+VYECL+QGCQEKELFDIASHI
Sbjct: 661  QLVTESMIVVLCKAKQIDAALVEYGNR---FGSFGTSSIVYECLLQGCQEKELFDIASHI 720

Query: 721  FSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIEAYG 780
            FSDMMFYGVKISE+LYQ MMLM+CKTGYPEIAHYLLERAELEGV++DDVSTYVKIIEAYG
Sbjct: 721  FSDMMFYGVKISESLYQFMMLMHCKTGYPEIAHYLLERAELEGVIVDDVSTYVKIIEAYG 780

Query: 781  ELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTVN 840
            ELKLWQKAESLVG L+LKLATIDRKIWNALIQAYAKSGCYERARAVFNTMM +GPSP+VN
Sbjct: 781  ELKLWQKAESLVGKLKLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMCNGPSPSVN 840

Query: 841  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHGM 900
            SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSS+LLMLDAFARDGN+FEVKKIYHGM
Sbjct: 841  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSILLMLDAFARDGNVFEVKKIYHGM 900

Query: 901  KAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGVEDF 960
            KAAGYLPTMHLYRSMI LLC GKRVRDVEAML EMEEAGFKPDLSILNSVI+LYVGVEDF
Sbjct: 901  KAAGYLPTMHLYRSMIALLCKGKRVRDVEAMLLEMEEAGFKPDLSILNSVIKLYVGVEDF 960

Query: 961  RNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020
            RNASR YQLI ETGLTPD+DTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL
Sbjct: 961  RNASRMYQLILETGLTPDEDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1020

Query: 1021 ISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKETGI 1080
            ISALSKRQLVEEAEELFEELRS GCKLDRFFYHVMMKM+RN+G+HLKAERLLVMMKE+GI
Sbjct: 1021 ISALSKRQLVEEAEELFEELRSNGCKLDRFFYHVMMKMFRNTGDHLKAERLLVMMKESGI 1080

Query: 1081 DPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDAYLRNGDYNGGIQ 1140
            +PTVATMHLLMVSYGSSGHPKEAE+VLNDLKATGMNLDTLPYSSVIDAYLR GDYNGGI+
Sbjct: 1081 EPTVATMHLLMVSYGSSGHPKEAEQVLNDLKATGMNLDTLPYSSVIDAYLRKGDYNGGIE 1140

Query: 1141 KLMGMKADGIEPDYRIWTCFIRAASLSESTTEAIIILNALRDTGFDLPIRLLTEKSGSLV 1200
            KLM MKADGIEPDYRIWTCFIRAASLSE T EAIIILNALRDTGFDLPIRLLTEKS SLV
Sbjct: 1141 KLMEMKADGIEPDYRIWTCFIRAASLSEGTGEAIIILNALRDTGFDLPIRLLTEKSQSLV 1200

Query: 1201 LEVDQYLEKLVAMEDDDAAFNFVNALEDLLWAFELRATASWIFQLAIKRNIFRQDIFRVA 1260
            LEVDQ LEKL AMEDDDAAFNFVNALEDLLWAFELRATASW+FQLAIKRNI+RQDIFRVA
Sbjct: 1201 LEVDQCLEKLGAMEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRNIYRQDIFRVA 1260

Query: 1261 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGFPESPKSVVLITGMAEYNMVSLNSTL 1320
            DKDWGADFRKLSAGSALVALTLWLDHMQDASLQG PESPKSVVLITG AEYNMVSLNSTL
Sbjct: 1261 DKDWGADFRKLSAGSALVALTLWLDHMQDASLQGCPESPKSVVLITGSAEYNMVSLNSTL 1320

Query: 1321 KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCLDLELKDAPALPELNSMKLIDG 1380
            KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFC DLELKDAPALPELNSMKLIDG
Sbjct: 1321 KVCLWEMGSPFLPCRTRSGLLIAKAHSLRMWLKDSSFCSDLELKDAPALPELNSMKLIDG 1380

Query: 1381 CFIRRGLVSAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMIK 1440
            CFIRRGLV AFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKM+K
Sbjct: 1381 CFIRRGLVPAFKDITERLGFVRPKKFSRLALLPDEKRDKVIKADLEGRKEKLEKVKKMMK 1440

Query: 1441 SGKVRRITKIKRRTYYRSLDAMKKN 1460
            SGKVRRIT+IK+RTY+RSL+A+KKN
Sbjct: 1441 SGKVRRITRIKKRTYHRSLNAVKKN 1459

[Close]

BLAST of Lcy02g011080 vs. TAIR 10
Match: AT3G18110.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 1808.5 bits (4683), Expect = 0.0e+00
Identity = 926/1431 (64.71%), Postives = 1126/1431 (78.69%), Query Frame = 0


Query: 29   EQQSEIN--TNTTQKFRYSRASPSVRWPNLKLTESF-QLPSQTHFTVPSPWQTHVVDESE 88
            ++Q+ I+  T+++QKF YSRASP+VRWP+L L E +   PSQT  +  SP          
Sbjct: 25   DEQANISSTTSSSQKFTYSRASPAVRWPHLNLREIYDSTPSQTLSSPVSP---------- 84

Query: 89   ASVRTQNSEIEDELES--VGMASDETREVLGRPSKTRVKKMNKLALKRAKDWRERVQFLT 148
             +    + ++ D + S       DET     R    RVKKMNK+AL +AKDWRERV+FLT
Sbjct: 85   IAGTPDSGDVVDSIASREEQKTKDETAVATRR---RRVKKMNKVALIKAKDWRERVKFLT 144

Query: 149  DRILALKQDEFVADVLDDRKVQMTPTDFCFVVKWVGRSNWHRALEVYEWLNLRHWYSPNA 208
            D+IL+LK ++FVAD+LD R VQMTPTD+CFVVK VG+ +W RALEV+EWLNLRHW+SPNA
Sbjct: 145  DKILSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNA 204

Query: 209  RMLATILAVLGKANQEALAVEIFTRSEPAIGNTVQVYNAMMGVYARNGRFVQVQELLDLM 268
            RM+A IL VLG+ NQE+LAVEIFTR+EP +G+ VQVYNAMMGVY+R+G+F + QEL+D M
Sbjct: 205  RMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAM 264

Query: 269  RTRGCEPDLVSFNTLINARMKSGPMTPNLSLQFLNEVRKSGIRPDIITYNTLISACSRES 328
            R RGC PDL+SFNTLINAR+KSG +TPNL+++ L+ VR SG+RPD ITYNTL+SACSR+S
Sbjct: 265  RQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDS 324

Query: 329  NLEEAMKVYNDMERHNCQPDLWTYNAMISVYGRCGLASRADQLFKELESKGFFPDAVTYN 388
            NL+ A+KV+ DME H CQPDLWTYNAMISVYGRCGLA+ A++LF ELE KGFFPDAVTYN
Sbjct: 325  NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYN 384

Query: 389  SLLYAFAREGNVEKVKEICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMK-L 448
            SLLYAFARE N EKVKE+ ++M   GFGKDEMTYNTIIHMYGKQ Q DLA QLY+DMK L
Sbjct: 385  SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 444

Query: 449  SGRIPDEVTYTVLIDSLGKSSKMEEAANIMTEMLDSGVKPTLRTYSALICGYGKAGKPVE 508
            SGR PD +TYTVLIDSLGK+++  EAA +M+EMLD G+KPTL+TYSALICGY KAGK  E
Sbjct: 445  SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 504

Query: 509  AEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLR 568
            AE TF CMLRSG +PD LAYSVM+D+ LR NET+KA  LY++M+ DG TP   LYE+M+ 
Sbjct: 505  AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 564

Query: 569  NLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSILIKGECYDHAAKMLRLALDTGYDLDHEN 628
             L+KE + DDI K IRDM+E CG+NP  +SS+L+KGEC+D AA+ L++A+  GY+L+++ 
Sbjct: 565  GLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDT 624

Query: 629  LLSILSTYSLSGRHLEACELLEFLKERTSNSNQLVTESLIVVLCKAKQIDAALVEYGNTT 688
            LLSIL +YS SGRH EA ELLEFLKE  S S +L+TE+LIV+ CK   + AAL EY    
Sbjct: 625  LLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADP 684

Query: 689  RGFSSYGTNSLVYECLIQGCQEKELFDIASHIFSDMMFYGVKISENLYQVMMLMYCKTGY 748
                    +S +YE L+  C   E +  AS +FSD+   G + SE++ + M+++YCK G+
Sbjct: 685  CVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGF 744

Query: 749  PEIAHYLLERAELEGVVIDDVSTYVKIIEAYGELKLWQKAESLVGNLRLKLATIDRKIWN 808
            PE AH ++ +AE +G        Y  IIEAYG+ KLWQKAES+VGNLR    T D K WN
Sbjct: 745  PETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 804

Query: 809  ALIQAYAKSGCYERARAVFNTMMRDGPSPTVNSINGLLQALIVDNRLKELYVVVQELQDM 868
            +L+ AYA+ GCYERARA+FNTMMRDGPSPTV SIN LL AL VD RL+ELYVVV+ELQDM
Sbjct: 805  SLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 864

Query: 869  GFKISKSSVLLMLDAFARDGNIFEVKKIYHGMKAAGYLPTMHLYRSMIELLCTGKRVRDV 928
            GFKISKSS+LLMLDAFAR GNIFEVKKIY  MKAAGYLPT+ LYR MIELLC GKRVRD 
Sbjct: 865  GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 924

Query: 929  EAMLSEMEEAGFKPDLSILNSVIRLYVGVEDFRNASRTYQLIQETGLTPDQDTYNSLIIM 988
            E M+SEMEEA FK +L+I NS++++Y  +ED++   + YQ I+ETGL PD+ TYN+LIIM
Sbjct: 925  EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 984

Query: 989  YCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSLISALSKRQLVEEAEELFEELRSTGCKLD 1048
            YCRD RPEEG  LM +M+  G++P LDTYKSLISA  K++ +E+AE+LFEEL S G KLD
Sbjct: 985  YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1044

Query: 1049 RFFYHVMMKMYRNSGNHLKAERLLVMMKETGIDPTVATMHLLMVSYGSSGHPKEAEKVLN 1108
            R FYH MMK+ R+SG+  KAE+LL MMK  GI+PT+ATMHLLMVSY SSG+P+EAEKVL+
Sbjct: 1045 RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLS 1104

Query: 1109 DLKATGMNLDTLPYSSVIDAYLRNGDYNGGIQKLMGMKADGIEPDYRIWTCFIRAASLSE 1168
            +LK T + L TLPYSSVIDAYLR+ DYN GI++L+ MK +G+EPD+RIWTCF+RAAS S+
Sbjct: 1105 NLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSK 1164

Query: 1169 STTEAIIILNALRDTGFDLPIRLLTEKSGSLVLEVDQYLEKLVAMEDDDAAFNFVNALED 1228
               E +++L AL D GFDLPIRLL  +   LV EVD + EKL ++E D+AA NFVNAL +
Sbjct: 1165 EKIEVMLLLKALEDIGFDLPIRLLAGRPELLVSEVDGWFEKLKSIE-DNAALNFVNALLN 1224

Query: 1229 LLWAFELRATASWIFQLAIKRNIFRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQ 1288
            LLWAFELRATASW+FQL IKR IF  D+FRVADKDWGADFR+LS G+ALVALTLWLDHMQ
Sbjct: 1225 LLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALVALTLWLDHMQ 1284

Query: 1289 DASLQGFPESPKSVVLITGMAEYNMVSLNSTLKVCLWEMGSPFLPCRTRSGLLIAKAHSL 1348
            DASL+G+PESPKSVVLITG AEYN +SL+ TLK CLWEMGSPFLPC+TR+GLL+AKAHSL
Sbjct: 1285 DASLEGYPESPKSVVLITGTAEYNGISLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHSL 1344

Query: 1349 RMWLKDSSFCLDLELKDAPALPELNSMKLIDGCFIRRGLVSAFKDITERL-GFVRPKKFS 1408
            RMWLKDS FC DLELKD+ +LPE NSM LIDGCFIRRGLV AF  I ERL GFV PKKFS
Sbjct: 1345 RMWLKDSPFCFDLELKDSVSLPESNSMDLIDGCFIRRGLVPAFNHIKERLGGFVSPKKFS 1404

Query: 1409 RLALLPDEKRDKVIKADLEGRKEKLEKVKKMIKSGKVRRITKIKRRTYYRS 1453
            RLALLPDE R++VIK D+EG ++KLEK+KK     +   I    RR + RS
Sbjct: 1405 RLALLPDEMRERVIKTDIEGHRQKLEKMKKKKMGNETNGIN--TRRKFVRS 1439

[Close]

BLAST of Lcy02g011080 vs. TAIR 10
Match: AT4G31850.1 (proton gradient regulation 3 )

HSP 1 Score: 269.2 bits (687), Expect = 1.9e-71
Identity = 241/1010 (23.86%), Postives = 428/1010 (42.38%), Query Frame = 0


Query: 193  LNLRHWYSPNARMLATILAVLGKANQEALAVEIFTRSEPAIGNTVQVYNAMMGVYARNGR 252
            LNL H  +     +   L V GK  + A   ++  +    I      Y  +    +  G 
Sbjct: 112  LNLVH-TTETCNYMLEALRVDGKLEEMAYVFDLMQKR--IIKRDTNTYLTIFKSLSVKGG 171

Query: 253  FVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSLQFLNEVRKSGIRPDIITY 312
              Q    L  MR  G   +  S+N LI+  +KS   T   +++    +   G RP + TY
Sbjct: 172  LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTE--AMEVYRRMILEGFRPSLQTY 231

Query: 313  NTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVYGRCGLASRADQLFKELES 372
            ++L+    +  +++  M +  +ME    +P+++T+   I V GR G  + A ++ K ++ 
Sbjct: 232  SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 291

Query: 373  KGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDEMTYNTIIHMYGKQEQHDL 432
            +G  PD VTY  L+ A      ++  KE+ E+M       D +TY T++  +      D 
Sbjct: 292  EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 351

Query: 433  AFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTEMLDSGVKPTLRTYSALIC 492
              Q + +M+  G +PD VT+T+L+D+L K+    EA + +  M D G+ P L TY+ LIC
Sbjct: 352  VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 411

Query: 493  G-----------------------------------YGKAGKPVEAEKTFDCMLRSGIRP 552
            G                                   YGK+G  V A +TF+ M   GI P
Sbjct: 412  GLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAP 471

Query: 553  DYLAYSVMIDLFLRFNETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVI 612
            + +A +  +    +    ++A  ++  +   GL PD   Y +M++   K  ++D+  K++
Sbjct: 472  NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLL 531

Query: 613  RDMQEQCGLNPQV-----LSSILIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSL 672
             +M E  G  P V     L + L K +  D A KM     +           ++L+    
Sbjct: 532  SEMMEN-GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 591

Query: 673  SGRHLEACELLEFLKERTSNSNQLVTESLIVVLCKAKQIDAAL---------------VE 732
            +G+  EA EL E + ++    N +   +L   LCK  ++  AL                 
Sbjct: 592  NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 651

Query: 733  YGNTTRGFSSYG-----------TNSLVYE------CLIQGCQEKELFDIASHIFSDMMF 792
            Y     G    G              LVY        L+ G  +  L + A  I ++ ++
Sbjct: 652  YNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLY 711

Query: 793  YGVKISENLY--QVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKII-------E 852
                   NL+   ++  +  + G      +  ER    G+  D  S  V II        
Sbjct: 712  NCADQPANLFWEDLIGSILAEAGIDNAVSF-SERLVANGICRDGDSILVPIIRYSCKHNN 771

Query: 853  AYGELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSP 912
              G   L++K    +G ++ KL T     +N LI    ++   E A+ VF  +   G  P
Sbjct: 772  VSGARTLFEKFTKDLG-VQPKLPT-----YNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 831

Query: 913  TVNSINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIY 972
             V + N LL A     ++ EL+ + +E+     + +  +  +++    + GN+ +   +Y
Sbjct: 832  DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 891

Query: 973  HG-MKAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVG 1032
            +  M    + PT   Y  +I+ L    R+ + + +   M + G +P+ +I N +I  +  
Sbjct: 892  YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 951

Query: 1033 VEDFRNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDT 1092
              +   A   ++ + + G+ PD  TY+ L+   C   R +EGL    E+K  G+ P +  
Sbjct: 952  AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 1011

Query: 1093 YKSLISALSKRQLVEEAEELFEELR-STGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMM 1120
            Y  +I+ L K   +EEA  LF E++ S G   D + Y+ ++     +G   +A ++   +
Sbjct: 1012 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1071

[Close]

BLAST of Lcy02g011080 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 231.5 bits (589), Expect = 4.4e-60
Identity = 185/763 (24.25%), Postives = 343/763 (44.95%), Query Frame = 0


Query: 112 VLGRPSKTRVKKMNKLALKRAKDWRERVQFLTDRILALKQDEFVADVLDDRKVQMTPTDF 171
           VLG PS         +++++ K +   V+ L +++ +L     +A  LD  K +++  DF
Sbjct: 59  VLGNPS---------VSVEKGK-YSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDF 118

Query: 172 CFVVK-WVGRSNWHRALEVYEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFTR-S 231
             V K + GR +W R+L +++++  + W  PN  +   ++++LG+       +E+F    
Sbjct: 119 ALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMP 178

Query: 232 EPAIGNTVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMT 291
              +  +V  Y A++  Y RNGR+    ELLD M+     P ++++NT+INA  + G   
Sbjct: 179 SQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDW 238

Query: 292 PNLSLQFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNA 351
             L L    E+R  GI+PDI+TYNTL+SAC+     +EA  V+  M      PDL TY+ 
Sbjct: 239 EGL-LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 298

Query: 352 MISVYGRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNG 411
           ++  +G+     +   L  E+ S G  PD  +YN LL A+A+ G++++   +  +M   G
Sbjct: 299 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 358

Query: 412 FGKDEMTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAA 471
              +  TY+ +++++G+  ++D   QL+ +MK S   PD  TY +LI+  G+    +E  
Sbjct: 359 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 418

Query: 472 NIMTEMLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLF 531
            +  +M++  ++P + TY  +I   GK G   +A K    M  + I P   AY+ +I+ F
Sbjct: 419 TLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAF 478

Query: 532 LRFNETKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQ 591
            +    ++A++ +  M   G  P    +  +L +                          
Sbjct: 479 GQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA------------------------ 538

Query: 592 VLSSILIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKER 651
                  +G     +  +L   +D+G   + +   + +  Y   G+  EA +    +++ 
Sbjct: 539 -------RGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS 598

Query: 652 TSNSNQLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFD 711
             + ++   E+++ V   A+ +D                             C+E+    
Sbjct: 599 RCDPDERTLEAVLSVYSFARLVDE----------------------------CREQ---- 658

Query: 712 IASHIFSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKI 771
                F +M    +  S   Y +M+ +Y KT   +  + LLE   L   V +      ++
Sbjct: 659 -----FEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM-LSNRVSNIHQVIGQM 718

Query: 772 IEA-YGELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDG 831
           I+  Y +   WQ  E ++  L  +   +  + +NAL+ A    G  ERA  V N   + G
Sbjct: 719 IKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRG 740

Query: 832 PSPTVNSINGLLQALIVDNRLKE------LYVVVQELQDMGFK 866
             P +   N L+ ++ V +R+ E      L V + ++ DM  K
Sbjct: 779 LFPELFRKNKLVWSVDV-HRMSEGGMYTALSVWLNDINDMLLK 740

[Close]

BLAST of Lcy02g011080 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 230.7 bits (587), Expect = 7.4e-60
Identity = 214/980 (21.84%), Postives = 406/980 (41.43%), Query Frame = 0


Query: 236  TVQVYNAMMGVYARNGRFVQVQELLDLMRTRGCEPDLVSFNTLINARMKSGPMTPNLSLQ 295
            +V   NA++G   ++G  V V   L  M  R   PD+ +FN LIN     G      S  
Sbjct: 197  SVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSF--EKSSY 256

Query: 296  FLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVYG 355
             + ++ KSG  P I+TYNT++    ++   + A+++ + M+      D+ TYN +I    
Sbjct: 257  LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLC 316

Query: 356  RCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDEM 415
            R    ++   L +++  +   P+ VTYN+L+  F+ EG V    ++  EM++ G   + +
Sbjct: 317  RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 376

Query: 416  TYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTEM 475
            T+N +I  +  +     A +++  M+  G  P EV+Y VL+D L K+++ + A      M
Sbjct: 377  TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 436

Query: 476  LDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNET 535
              +GV     TY+ +I G  K G   EA    + M + GI PD + YS +I+ F +    
Sbjct: 437  KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 496

Query: 536  KKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSIL 595
            K A  +   + R GL+P+G +Y  ++ N  +   L +  ++   M  +         ++L
Sbjct: 497  KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 556

Query: 596  IKGEC----YDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTS 655
            +   C       A + +R     G   +  +   +++ Y  SG  L+A  + + + +   
Sbjct: 557  VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 616

Query: 656  NSNQLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIA 715
            +       SL+  LCK   +  A  E    +        ++++Y  L+    +      A
Sbjct: 617  HPTFFTYGSLLKGLCKGGHLREA--EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 676

Query: 716  SHIFSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIE 775
              +F +M+   +      Y  ++   C+ G   IA    + AE  G V+ +   Y   ++
Sbjct: 677  VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD 736

Query: 776  AYGELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSP 835
               +   W+        +     T D    NA+I  Y++ G  E+   +   M      P
Sbjct: 737  GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP 796

Query: 836  TVNSINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIY 895
             + + N                                   ++L  +++  ++     +Y
Sbjct: 797  NLTTYN-----------------------------------ILLHGYSKRKDVSTSFLLY 856

Query: 896  HGMKAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGV 955
              +   G LP      S++  +C    +     +L      G + D    N +I      
Sbjct: 857  RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 916

Query: 956  EDFRNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTY 1015
             +   A    +++   G++ D+DT ++++ +  R+ R +E   ++HEM ++G+ P    Y
Sbjct: 917  GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 976

Query: 1016 KSLISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKE 1075
              LI+ L +   ++ A  + EE+ +            M++     G   +A  LL  M +
Sbjct: 977  IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 1036

Query: 1076 TGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMNLDTLPYSSVIDAYLRNGDYNG 1135
              + PT+A+   LM     +G+  EA ++   +   G+ LD + Y+ +I      GD   
Sbjct: 1037 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1096

Query: 1136 GIQKLMGMKADGIEPDYRIWTCFIRAASLSEST-TEAIIILNALRDTGFDLPIRLLTEKS 1195
              +    MK DG   +   +   IR     E+  + A IIL  L   GF   + L  +  
Sbjct: 1097 AFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQDSH 1133

Query: 1196 GSLVLEVDQYLEKLVAMEDD 1211
             +L +     +EKL A++ +
Sbjct: 1157 RNLKMA----MEKLKALQSN 1133

[Close]

BLAST of Lcy02g011080 vs. TAIR 10
Match: AT3G06920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 229.6 bits (584), Expect = 1.7e-59
Identity = 177/779 (22.72%), Postives = 330/779 (42.36%), Query Frame = 0


Query: 295  QFLNEVRKSGIRPDIITYNTLISACSRESNLEEAMKVYNDMERHNCQPDLWTYNAMISVY 354
            Q L E+  +G  P + T   ++  C + + L E   V   M +   +P    Y  +I  +
Sbjct: 119  QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178

Query: 355  GRCGLASRADQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEICEEMVNNGFGKDE 414
                 +     LF++++  G+ P    + +L+  FA+EG V+    + +EM ++    D 
Sbjct: 179  SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238

Query: 415  MTYNTIIHMYGKQEQHDLAFQLYRDMKLSGRIPDEVTYTVLIDSLGKSSKMEEAANIMTE 474
            + YN  I  +GK  + D+A++ + +++ +G  PDEVTYT +I  L K+++++EA  +   
Sbjct: 239  VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298

Query: 475  MLDSGVKPTLRTYSALICGYGKAGKPVEAEKTFDCMLRSGIRPDYLAYSVMIDLFLRFNE 534
            +  +   P    Y+ +I GYG AGK  EA    +     G  P  +AY+ ++    +  +
Sbjct: 299  LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358

Query: 535  TKKAMLLYKEMVRDGLTPDGALYEVMLRNLVKEKKLDDIDKVIRDMQEQCGLNPQVLSSI 594
              +A+ +++EM +D   P+ + Y +++  L +  KLD   + +RD  ++ GL P V +  
Sbjct: 359  VDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFE-LRDSMQKAGLFPNVRTVN 418

Query: 595  LIKGECYDHAAKMLRLALDTGYDLDHENLLSILSTYSLSGRHLEACELLEFLKERTSNSN 654
            ++     D   K  +L                           EAC + E +  +    +
Sbjct: 419  IM----VDRLCKSQKLD--------------------------EACAMFEEMDYKVCTPD 478

Query: 655  QLVTESLIVVLCKAKQIDAALVEYGNTTRGFSSYGTNSLVYECLIQGCQEKELFDIASHI 714
            ++   SLI  L K  ++D A   Y       S   TNS+VY  LI+        +    I
Sbjct: 479  EITFCSLIDGLGKVGRVDDAYKVYEKMLD--SDCRTNSIVYTSLIKNFFNHGRKEDGHKI 538

Query: 715  FSDMMFYGVKISENLYQVMMLMYCKTGYPEIAHYLLERAELEGVVIDDVSTYVKIIEAYG 774
            + DM+         L    M    K G PE    + E  +    V  D  +Y  +I    
Sbjct: 539  YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV-PDARSYSILIHGLI 598

Query: 775  ELKLWQKAESLVGNLRLKLATIDRKIWNALIQAYAKSGCYERARAVFNTMMRDGPSPTVN 834
            +     +   L  +++ +   +D + +N +I  + K G   +A  +   M   G  PTV 
Sbjct: 599  KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 658

Query: 835  SINGLLQALIVDNRLKELYVVVQELQDMGFKISKSSVLLMLDAFARDGNIFEVKKIYHGM 894
            +   ++  L   +RL E Y++ +E +    +++      ++D F + G I E   I   +
Sbjct: 659  TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 718

Query: 895  KAAGYLPTMHLYRSMIELLCTGKRVRDVEAMLSEMEEAGFKPDLSILNSVIRLYVGVEDF 954
               G  P ++ + S+++ L   + + +       M+E    P+      +I     V  F
Sbjct: 719  MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 778

Query: 955  RNASRTYQLIQETGLTPDQDTYNSLIIMYCRDCRPEEGLSLMHEMKRRGMEPVLDTYKSL 1014
              A   +Q +Q+ G+ P   +Y ++I    +     E  +L    K  G  P    Y ++
Sbjct: 779  NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 838

Query: 1015 ISALSKRQLVEEAEELFEELRSTGCKLDRFFYHVMMKMYRNSGNHLKAERLLVMMKETG 1074
            I  LS      +A  LFEE R  G  +      V++     +    +A  +  +++ETG
Sbjct: 839  IEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862

The following BLAST results are available for this feature:

BLAST of Lcy02g011080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5G1S8	0.0e+00	64.71	Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidop...	[more]
Q9SZ52	2.7e-70	23.86	Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop...	[more]
Q9S7Q2	6.1e-59	24.25	Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop...	[more]
Q9LVQ5	1.0e-58	21.84	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX...	[more]
Q9M907	2.3e-58	22.72	Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX...	[more]

BLAST of Lcy02g011080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2M4	0.0e+00	92.83	pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Cucurbit...	[more]
A0A6J1K203	0.0e+00	92.56	pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Cucurbit...	[more]
A0A6J1DUB0	0.0e+00	91.19	pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Momordic...	[more]
A0A1S3CKK9	0.0e+00	91.20	pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Cucumis ...	[more]
A0A5A7UY21	0.0e+00	91.20	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Lcy02g011080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958253.1	0.0e+00	92.83	pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucurbita ...	[more]
KAG7035564.1	0.0e+00	92.76	Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosper...	[more]
XP_022995470.1	0.0e+00	92.56	pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucurbita ...	[more]
XP_038901451.1	0.0e+00	92.29	pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 ...	[more]
XP_023533489.1	0.0e+00	92.35	pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucurbita ...	[more]

BLAST of Lcy02g011080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18110.1	0.0e+00	64.71	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G31850.1	1.9e-71	23.86	proton gradient regulation 3	[more]
AT1G74850.1	4.4e-60	24.25	plastid transcriptionally active 2	[more]
AT5G55840.1	7.4e-60	21.84	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G06920.1	1.7e-59	22.72	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..41
None	No IPR available	PANTHER	PTHR47933:SF31	OS06G0199100 PROTEIN	coord: 12..1352
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 12..1352
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 459..647
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 128..289 e-value: 1.5E-23 score: 85.3 coord: 603..756 e-value: 4.3E-9 score: 38.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1049..1169 e-value: 1.2E-18 score: 69.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 876..1037 e-value: 4.6E-37 score: 130.0 coord: 419..596 e-value: 1.5E-41 score: 144.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 762..875 e-value: 3.9E-17 score: 64.7 coord: 290..410 e-value: 6.2E-37 score: 129.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 297..355 e-value: 1.4E-15 score: 57.1 coord: 541..591 e-value: 0.003 score: 17.6 coord: 1099..1147 e-value: 0.0022 score: 18.0 coord: 1030..1089 e-value: 3.8E-5 score: 23.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 380..410 e-value: 1.4E-6 score: 28.2 coord: 873..898 e-value: 0.2 score: 12.0 coord: 906..934 e-value: 0.22 score: 11.9 coord: 800..828 e-value: 3.3E-6 score: 27.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 380..411 e-value: 2.5E-7 score: 28.4 coord: 1116..1147 e-value: 7.3E-4 score: 17.5 coord: 905..937 e-value: 3.4E-5 score: 21.7 coord: 486..518 e-value: 1.5E-7 score: 29.2 coord: 346..379 e-value: 4.2E-7 score: 27.7 coord: 521..553 e-value: 5.2E-5 score: 21.2 coord: 975..1006 e-value: 2.4E-8 score: 31.6 coord: 239..271 e-value: 3.8E-7 score: 27.9 coord: 416..449 e-value: 4.3E-7 score: 27.7 coord: 1046..1077 e-value: 0.0017 score: 16.4 coord: 310..343 e-value: 6.8E-11 score: 39.7 coord: 450..483 e-value: 8.4E-7 score: 26.8 coord: 800..832 e-value: 3.8E-7 score: 27.9 coord: 1010..1042 e-value: 1.3E-6 score: 26.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 237..281 e-value: 1.9E-9 score: 37.6 coord: 971..1020 e-value: 1.3E-10 score: 41.3 coord: 486..528 e-value: 5.8E-8 score: 32.8 coord: 412..460 e-value: 1.4E-14 score: 54.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 343..377 score: 12.320559
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 378..412 score: 11.651919
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 308..342 score: 13.778412
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1112..1146 score: 9.88715
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 448..482 score: 12.441133
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 413..447 score: 11.640958
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 518..552 score: 10.522905
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1007..1041 score: 10.47906
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 797..831 score: 12.035565
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 483..517 score: 12.309597
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 236..270 score: 11.629997
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1042..1076 score: 10.117337
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 972..1006 score: 13.033043
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 902..936 score: 10.13926
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 271..307 score: 9.393891

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g011080.1	Lcy02g011080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0005515	protein binding