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Lcy02g011030 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCCAGATCGAAGATTGTTGCTGGAGGATTGTTTATTGCCAATTTCCCAAAGCCATCAGTTCTCAGCCCTCCTCTTTTACGCAGTCTCTTTCCCTCTGTTTTCGGCATCCGGTATGCTTTTTTCTCTTTTCGTTTTTGTTTTCGTTTCATCGGTTTTAGAGTATGCTTTGGAGTGACTTAAAAATAGTGATTTTGACGAAAATGATTCGTTAAAATTCATGATTGGAATTTGTGATCAATTTGTGGAGTTTTGTGATCTTTGATCTTCATGTTCTTTGTAGTCACTAAAAGTTTGTTTGGAATTATGAACACTTCTCATAATCCCAGTCCTAAATTTTTGGAAACCCAAGCCAAAACAGTCTGTTGATTAAATTTTCAAAATCTACTTTATATATATAAATAAGAATTTCTATTGGTACTTCACTTTTTTTGAACTACTTCTGAAATTGATTTCAAACTTATTTTCATGCTCATGAGTAAAATTGTTTCTGTTTAATATATATGTTATGTGTCCAAAGAGAACATTTAGGTCATGTTTGATAACTATTTCGTTTTTGGTTTTTAGTTTTTGAAAATTAAACTTATAAATACTACTTCCACTTTCTTTGTTTTGTTATCTACAACATTCCCATGTTTTCAAAAACCAAATCAAAATTTGAAAAAAAAAAGAAAAAAAAAGTAGTTTTCAAAAACTTGTTTTTATTTTTGGAATTTTGCTAAGATCTCAAATGTCTACTTAACAAAAATTAAAACCACAAGAAAATTGAGAGAAAACAAGCATAATTTTCAAAAACCAAATGGTTATCAAACGGGCCTTAACTTTTTTCTTTCTTTTTTTTGTTTTGATGTTGGTATAATTCATGTCAAACTAAACATACACTATCTAAAACTTTTTAAACGAGGTAGAAATGCTTTGATCACCGAATTATGAGGTGAAAAAAGTAATAAGAATAAAATATTGGTTTATATTCTACTTAATTTAAATTATTTAATGAAATTTTCATATGAAATTTAGTTCAAACTGGCTAGTTGTTTTAAATGGGCGTATCCCCAAACTTTATGGTAATATGTAATATGAAGATTAATTAACCAGGATCAACATGGATTTGTAAGAAAAAGAAAAAATCAATACGAAGTATTTTAAAATATAAATACTAAAAGTCTAGAGCAGAAGGAATGTGAGACGTTAAAGATTAAGGTAGAATTTAGGACATTTTTTATTAATATTGTATTTTTTAAAACTTTTTATTAAAATATAGTTATTTTGAAACTTATTATTAAGATATTGTTGTTTTAATTTTTCAGTCAAAGGTCATCTCTTGAAGAGACGACCTTCAAACGCGTGTCTGCAAGTCGTCTCTTCAAAAGACGACGTGCAGACGTGGCAATCATTTAAAAAAAAAAAAAATCATGAAGGTCGTCTCTTTAAGAGACGACCTCCACACAAAAATGAATAAAATCTGATGTTGGCAATATGGTGAGCGTGCGCCTTACTTTCGTACACTTCATGGGTTTGAGTCTCACCAGTAACGTTTGTGCAGTTTAATTTTTCTTTTTCGTTTTTGGTGCAGATTTTTGTTTTCTTTTTCTTTTTCAACTGTTCTTTTAAATTTGAAATTTAAATAGATAAATACCAATAATTTAATTTAAGTTATAAAATACACATATTCTTTATATTTTTTTATTTTGAATTATAAAATTATTGTAATCAAAATTTAAATTTAGTTCACACATTTTTTTTTAAAATATTGTAAGATAAAGATTTTAAAATATTTTTTTAAAAAATGTGTGGCCTAAATTAAAATTTTGATTATAATAATTTTATAATTCAAAATAAAAAAATATAAAGAATATGTGTATTTTATATCTTAAATTAAATTATTTATTATTTTTTTTTAGAAACACCTTAAATTAAATTATTCGTATTTATCTATTTAAATTTCAAATTTGAAAGAAAAGTGAAAAAAAGAAAAAGAAAACAAAAATCTGCACCAAAAACGAAAAAGAAAAAAAAACTGCACAAAGTTATCGGTGAGACTCGAACCCTTGAAGTGAAGGTTAGCAAGGCGCGAGCTCACAAAATTGCTAACATCAAATTTTGTTTATCTTTGTGTGGAGGTCGCGACCTTCACGATTTTTTTTTTTAAAATCATAACCACGTCTGCACGTCGTCTTTTGAAGAGACGATTTGCAGACAGCGTTTGAAAACAACAATATTTTCATAATAAGTTTCAAAACAACTATATTTTAATAAAAAGTTTTAAAAAATATAATATTAATAAAAAATGTCCTAGAATTTAAACTACTTTTCAAAAACTGAATAAAATAAAATAAAATAAAAAATACTTGAAAATATATAATAATCTAACCCAAAATAATAACAAATCCAACACAAGATTAAAAAAAATCAAATATGAAAAAATTCATCCCAATTAGTTAAAAAAAAAAGTTTAAGTAAATAAATCAATCAATCAAAATGCATCAACCCACATGTAATCAAGGAAATTTTATCATATTTGTAAATTATTTTTTAGAAAAATACACTTTAGGTTTTGGTTAAGTTTCATTTTGGTCTTTGAATTTTCAAACTCGACATTTTAGTCTCTGAAGTTTGGATTTCATTACATTTTAGTCCCTCCATCCATCTTTGCTAACTGTAGCTAATGTGACATTTTTTTATATTAAAAAAAATCTCCATTTTTTTAATTTAAATAGATTTTTAAAATTTTTCGTTTTCTTTTTCCGTTTCATCATCTTCTCCCCCTTCCCTATCTTTTTCCTCTAAACCTAATTTCAGCCTACCTTCACCGCCGCCGCCTGTCGCCACCATTGCTGGAAAAATCTTTTCTCTTATTTTTTCTTCTTTCTTCTCTTCCTTTTTCTTTCTCTTCTTCTTCTTCCTTTCTTATTTTTTTTCACAAAAATGGAAAAGGTTCTCTTTCTCCACTCTCCTTTCTTTCTTCTTCCTTTTCCCCCTTCTTTCTTCCTTCTTTTCTATCTTTTAAGGAAAAACAAAAAACAAAAAAAAAAACTCAGATTGTGATGAGACAATCTGGAATGCGCCTAAATCTGGAACGAAACCTAGATCTGGGTTGGTTTAAACTGAACCAAGAAATCATCTTCACATCCTCATTAGCGTTTTTCACAATCTTCTTGATCCTCGCGCAACAGCAGCGAGTGCGGCCCCGTCTTTCAGTACATCATGCTGACGACGGTGACAAAACCCAAATATGGCGATGCGGTTGTTTGTGGTTGGGAGCGACGGCGGCACAAATGAATGCATGAATTGATGTATCACGTAGAAAGGCCACTTGTTAATTTCAAAAAGAAGGAAAAAAAAAACAAAAAGAAAAGGAATGTCACTTGTTGGAGAATTTATTAGGTGCTCCCAATGCAATGCTCTGCGTAGTTTTACACCGTTGGATGTAAGAGAGAGAAATTGTAAAAGCACCTCAATTTTATATCTAACGGTTACTAGAGGTAGACCAAATTTGAAGATATACATCCAACAATGTAAAATTATCTAGAGCATTGCACCGGAAGCACCTAATAATTATTTTCCACTCGTTCATAGTATAATACCGACTCAATTCATCATTAGATTAAAATAAGTTTTTTTTTTTCTTTTCTGATCTTTAATGTTATCTTTTCTTTTTGTCTTTTAAGAAAAAAAAAATACATTATCTTTTTGTGTTAGGGTCGGTAATAGGACCTTATTATAATCACCGTGGCTTTTATATTTTTATTTGATCAGTTCATTAGAAGTCAAACTCACTAATTGCATATTTAATTAATTAAGAAAACTTGTAGCTATGTGCATAGCCCATTCTCATAAAAGTTAAGACATTACTAACCTTTGTCAAGAGTCAATAGTTTATAAATCTCCCCATTCCTATTTTAAAAGAACATGTAAGAAAACTTGTATCCATAGCTTCTTCTCCTTTCTAGCTTTCTCTTCTTTTTCTTCTTTTAGTAATTGGTTCCTAAAACGATGACTTTATAAGTGACTCTATAGTGATATGAATGAAGCTCTCATGTCTTTGTATTTGGTTTCACCCCAACAACCTCATATCAATGAAAATAATTGTCCTCAATTATATACCATAAATCTTCTCCTTTCCTAACAAGTGCTATTAAGAGTTAGGCTCGTTGACCAACTTTTTTTTATTGATGAAATCACTGGAATCCTTAAATGTCGAACAAAGAAATTGTGAGTCTCATTGGCATAATCACATGAGGATCTGTGTTGATCTCTCTTTTGAATTGATGGTGTGCTATAAAGCAAATGATTTGGCCTAAATAAAACCTAAATAAATGGATGCATACTTGAAAAGAGGCCCAAAGGTCCTTTGTTTATGGGGGGAGAATGGTTTGGAAAGTACAATCAAAGTCTCACATCAACTAGACAAAAAGAAAAGATCGTGAGTATGTAAGGAATAACACACACAACTTCATTAGTATGAAACATTTTGGGTAAAACCAAAAGTAGTCATGAGAGAATATATTCAAAGTGGACATAACATCATACAATAGTAAAAATATGAAGAGGTCTGTTGTTCTTTAAAACATATATTAACAACATACACACGTTTTAAGAATCAAACTCGAAAGTGCAAAGTTGAAACATGATTAGAACCGAAACCTTTTAAAACTAAAAAAAGCACTGACTAGACATAATCATCATCAAAGTTTCATGACTAAATTTCTTATTTGACCTTATATCATATTCATTCAATCAATCCTTTTCGTTTTTCTTGTTTTTAGGGCAGGTCATTGGTCAGCATATGAGAAGAACCCTGAGGAGCAAATCTGCCCAACAGTAGTACCAGACCATGTGATCCACTCTCTATCTGAAAACTACTGGGTCCCACATCCTGAAACTGGAGTTTTTGGGCCACAAACAACCCACCACAGTTCTGTTCCAAACGACACGTCGGCTGGTGGGGGCGGCCATAAAGAGGGCTCGGTTCTGGAACTCAAGGCTTGGTTCCGACACAACGGCCTCGAGGACTCTGAGAAGCCACATTTTCTGTAA ATGGCCGCCAGATCGAAGATTGTTGCTGGAGGATTGTTTATTGCCAATTTCCCAAAGCCATCAGTTCTCAGCCCTCCTCTTTTACGCAGTCTCTTTCCCTCTGTTTTCGGCATCCGGGCAGGTCATTGGTCAGCATATGAGAAGAACCCTGAGGAGCAAATCTGCCCAACAGTAGTACCAGACCATGTGATCCACTCTCTATCTGAAAACTACTGGGTCCCACATCCTGAAACTGGAGTTTTTGGGCCACAAACAACCCACCACAGTTCTGTTCCAAACGACACGTCGGCTGGTGGGGGCGGCCATAAAGAGGGCTCGGTTCTGGAACTCAAGGCTTGGTTCCGACACAACGGCCTCGAGGACTCTGAGAAGCCACATTTTCTGTAA ATGGCCGCCAGATCGAAGATTGTTGCTGGAGGATTGTTTATTGCCAATTTCCCAAAGCCATCAGTTCTCAGCCCTCCTCTTTTACGCAGTCTCTTTCCCTCTGTTTTCGGCATCCGGGCAGGTCATTGGTCAGCATATGAGAAGAACCCTGAGGAGCAAATCTGCCCAACAGTAGTACCAGACCATGTGATCCACTCTCTATCTGAAAACTACTGGGTCCCACATCCTGAAACTGGAGTTTTTGGGCCACAAACAACCCACCACAGTTCTGTTCCAAACGACACGTCGGCTGGTGGGGGCGGCCATAAAGAGGGCTCGGTTCTGGAACTCAAGGCTTGGTTCCGACACAACGGCCTCGAGGACTCTGAGAAGCCACATTTTCTGTAA MAARSKIVAGGLFIANFPKPSVLSPPLLRSLFPSVFGIRAGHWSAYEKNPEEQICPTVVPDHVIHSLSENYWVPHPETGVFGPQTTHHSSVPNDTSAGGGGHKEGSVLELKAWFRHNGLEDSEKPHFL Homology
BLAST of Lcy02g011030 vs. ExPASy Swiss-Prot
Match: F4KFM8 (Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN=At5g17165 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.5e-17 Identity = 58/127 (45.67%), Postives = 73/127 (57.48%), Query Frame = 0
BLAST of Lcy02g011030 vs. ExPASy TrEMBL
Match: A0A6J1K564 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 GN=LOC111490853 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 2.1e-38 Identity = 80/120 (66.67%), Postives = 94/120 (78.33%), Query Frame = 0
BLAST of Lcy02g011030 vs. ExPASy TrEMBL
Match: A0A6J1H0D3 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662 GN=LOC111459285 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 9.6e-36 Identity = 77/112 (68.75%), Postives = 88/112 (78.57%), Query Frame = 0
BLAST of Lcy02g011030 vs. ExPASy TrEMBL
Match: A0A0A0KRJ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168830 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 6.9e-34 Identity = 82/131 (62.60%), Postives = 93/131 (70.99%), Query Frame = 0
BLAST of Lcy02g011030 vs. ExPASy TrEMBL
Match: A0A5A7UIY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00300 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.4e-31 Identity = 81/135 (60.00%), Postives = 95/135 (70.37%), Query Frame = 0
BLAST of Lcy02g011030 vs. ExPASy TrEMBL
Match: A0A1S4E6U6 (uncharacterized protein LOC103504694 OS=Cucumis melo OX=3656 GN=LOC103504694 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 4.2e-31 Identity = 80/131 (61.07%), Postives = 92/131 (70.23%), Query Frame = 0
BLAST of Lcy02g011030 vs. NCBI nr
Match: KAG6605657.1 (ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 172.6 bits (436), Expect = 2.3e-39 Identity = 83/127 (65.35%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of Lcy02g011030 vs. NCBI nr
Match: XP_023532525.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 171.4 bits (433), Expect = 5.0e-39 Identity = 82/120 (68.33%), Postives = 94/120 (78.33%), Query Frame = 0
BLAST of Lcy02g011030 vs. NCBI nr
Match: XP_022995249.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita maxima]) HSP 1 Score: 168.3 bits (425), Expect = 4.3e-38 Identity = 80/120 (66.67%), Postives = 94/120 (78.33%), Query Frame = 0
BLAST of Lcy02g011030 vs. NCBI nr
Match: XP_022957877.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita moschata]) HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35 Identity = 77/112 (68.75%), Postives = 88/112 (78.57%), Query Frame = 0
BLAST of Lcy02g011030 vs. NCBI nr
Match: XP_038875585.1 (late embryogenesis abundant protein At5g17165-like [Benincasa hispida]) HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33 Identity = 83/123 (67.48%), Postives = 92/123 (74.80%), Query Frame = 0
BLAST of Lcy02g011030 vs. TAIR 10
Match: AT3G03150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 98.2 bits (243), Expect = 5.1e-21 Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of Lcy02g011030 vs. TAIR 10
Match: AT5G17165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03150.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18 Identity = 58/127 (45.67%), Postives = 73/127 (57.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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