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Lcy02g011020 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTCACTTCACCCATTACAAAACCACATTAATATTATTTTGAAATCTTCCTCTTTCCATTGCAATTGCATGGCCGCCACTTCGAAGCTTATTATTATTGCTCGACCACTCGCTCATTTGCGGAAGCCAGTCCCTTTTTCTTCGGTTTTCACCCTCCGGTACGCCTACGCTTTTTCTTCTTCCCTTTTTGTTTTTTTTTTGTATTTTTGTACTTTTTTTTAAGTTACAACTTCACCATATTTGTGTTCATTTAGTCTTTGAATTTTAAAAAGTCATAATAAGTTACTAAGACTCCGTTTGATAACCATTTAGGTCTCGTTTGATAACTATATTTGGTTTTTGAAAATTATGCTTATTTTCTCCTAAATTTTGTACCATGGCTTTCATCCTAGTTAAGATTGTATTTGAATTCCTAGTCAAATTTCAAAAACAAAAACAAGTTTTTGAAAACTTTTTTTTTTTTTTGTTTCCAAAATTGGACTTGGTTTTGAAAACTAAGGTAGAAGATTGATACTTAAACCAAGAAACTTATAGGTGGAAGAAGTATGTGTGTGTAAGCTTAATTTTCAAAAACCAAAAACCAAATGGTTATCAAATGGGGCCTTGATTTTTTGGTTTTTTGTTTTTGAAAATATGCTTGTTTTCTTCCAATTTTCCATGTTTATGTTAAGGACATATTTGAATTCCTAGCCAAATTCCAAAAACAAAAACAACTTTTTTGAAAACTACATTTTTTTTTAGTTTTCAAATATTGGCTTGGCTTTTTAAAACATGAAAACAAGGTAGATGAAAAAACAAAGAAACTTATAAGTGAGAGTAGTGATTATAAGCTTAATTTTAAAAAATCAAAAACCAAAAACCAAATGGTTATTTCATAAGGCCCCGTTTGATAACCACTTCGTTTTTTGTTTTGGGTTTTTGAAAATTATGCTTGTTTTCTCCTAAATTGTCTATCATGACTTTCATCCTTGTTAGTGATCCATTTGAATTCCTAGCCAAATTCTAAAAACAAAAACAAGTTTTTGAAAACTACTTTTTTTTTTTCAAATTGGACTTGGTTTTTGAAAACAAGGAAGAAAGTTGATACTAAAACAAAAAAAAAACTTGTAAGTGAAATTAGGCGTGTATAAGCTTAATTTTCAAAAACCAAAAACAAAAAACGAAATGGTTATCAAACGGGGCCTAAATTTTTACTTTTGTGTCTAATAAGTCATTAAACTATTGAACGTAAAATTGAAAATTCAGAAATTTAGGATAAAAAATTGAAAGTTTAAGGATCTATGAAACACTTTTTTATGGATAAAATAACACAAATATGAAAGTTTAACGATGTATTAGACAACTTCTAAGAGTTCAGAGATTAAATAGACTCAAATCTTGAAAGTTTTGGAAGTAAACTTAACTTAACCTAGTTTTTTTTTTTTTTTTTTAATTTTATTGGAACCTAGTTTTGTTACTCGAATTGGGATTTTGTGATCGAACATTTCCTTTGATTTGTTTTGATGTGGGAAATTTAATTTTGGATGTCGTATTGATATTGCTCTGGAAAAGTTTACTAAGAAGAAACCGAAACATTATGTTCATCAAAATTTTCGAGTCGGGATGATACAAAATAGTCCGATGGATTGAGACAATATTGGAATAATTTTTGAAATAAAAGATTTTTTTTTAGTTAATAGAGTGTTTGAAATGGTTTTTGGGGAAACAATGTTTTTAAATAAAAATCATAATTCCTTTGAACGCCTTTAAAAGAATTAGTAATTAAAAGTGTGTTAGTATAGTTTTTAAATGATTTTGAAATGAAAAAAATAAAATTATTTTTAAAAATCTTAATAAATAAAAAATAAAAATAAAAAAAATAGATTATTTTTTAAACTCTTTGCATAACAAGAAAAAAAACTATCTATAGAAGAATAGAACCACTTTTTAATATTGTGTAGCGAAATAAGTTTGTTGTTAAAAGAACTTTTTAAAAACGGAAGAATTAAAAGTATTTTTATTAAAAGAATCTTGAAAAAGTAATAGGCACCCCAGGTAATTCTTGGCAAAATATTTATTATATAAGTACCTTTTAGAAACCATTTAGTCCATTCTGGTTGTGTCTACTACAATTTAAAAAATGTTTAATGGGTATCAAATTTTTAATTTTGGGTTAAATAAGTTTATAACTTTTAATCTTGTATTTTATACTTTATGGATTTTTAAACTTTTATTTTTGTATCGAATAAGTTTCTAATCTATACAATATTTTTTAAAGTTCAGGATCAATTTGACGTAAGATGAAAGTGTCAAAGTGTATCAATTTTAAGACTACACTTGTAATTTAATTTATATAATTTAAGAATTTCTTAAATAATATTTTAATATCTAAAATTTCAAAATGCTCCTTTTTTTTCGCTAGCAAAAGGCTCATTTTACTATTTCTTTTAATTTTCAACTGAATGCTACCAATTTTTTAAAAATAAAATATTTTTAGCCATTTATTAGCACTAGGGTAAAAAACATTGATGAGTGAAACATTGGAAGTTTTTTTTTTTCCTTTCCTTTTCTTTTTGGTTGTCTAGATAAGTAAAAAAAGAATTTTTTGTTAACAACTTCAAAATACTAAAAGATACTTTAAAAAAAAAAAAAAAGTTAATTGGTTTCTTTTATGGTATGGAACATGCTGATGATTACTTTTAAGTCTGGTAAAGAACCTAAGATAATATAATACATTTCTTATTTCAATAACAAAAATGATTTTTTTATCAACAAAAACATAGTTCAACTACCAAGAAGTTAGAAAATCAAATCTCCCACTCCCACATCGATAAGAAATAATTTAATTATATTTGACAAAAATAATTTGTAATGATAATATTAAAAACCAATTAACGACTACAAAGTTAATATTTTACGAAGTAATTTTCTAGTATAATTATTTTCAGGAAATCTAATATAATACCTTAAGATTCAAATTTATAATTGTGAATGATTTGAATGGATATCACATAGTTTAATATTTCATTACTTAAATCATTATTATTTAATTAAGGACAGTCTTGTTCTTTGCATATGCTTTTCTTTAGTTTCTCTTTTAAATTTGGGGTAAAAAAAAGTTAATTATCTTACAAAATGTTATGATTTCCTTGGACAAGGACAGGATCTTTGTACTTTAGGTCTATTTTATTTTCATTCAAAGTTGAGGAATGATAAAGGGGGAAAAAAGAAAATCAAATGTTTTGATAACCATACGTTTTCAACTGCAATCGCTTAGGTTTGACGTTGGAGTGGCATGGTTTTTGATACGCATCTTCTATATTCTTATCCGATATTGCTGCCTGCCTCATGCGTTTTTCTTTTTCTTTTTTCTCTTTTTTTTTTTTTTTTTCTTTTTAATTTTTATTATAATCTATGAATTGATAAATTATACAATACAAGTCAAACTCACTTATTGTATATTTAATTAAGAAAAATTTTAATTCCATTTGTTTTATCTTGAACTTAAAAAGAATACAAAATTTTTGTCTAATAGATGGATCAAACTTTAAAAGATAACAAATAGATCAAAATTAAAAGTTTATGAAAACTATTAGACACAAAATTAAAAACTTAATGACCTATTACGCGTTCGCTTTTTAAAATTTATAAATGTATTTAGACATTTTTTAAAGTTCAAAAACCTATTATACATAAACTTGAAAGTTGAAGAATATATTTAACAATTGATAATTTATGGTAGAAGAATCAAAATTAAAAAATTCATCATATCATAAACATTGATAAAAATTTTAGGCCCTGTACACACCTATAAGTTTCTTTGTTTTAGTATAATCTTCTTCCTTGTTTTCAAAAACCAAGTCCAATTTTGAAAAAAAAAAAAAAAATAGTTTTCAAAAACTTGTTTTTGTTTTTAGAATTTGACTAGGAATTCAAATGGATCCTTAAAAATGATGAAAGTCATGGTAGAGAATTTAGAAAAAAACAAGCATAATTTTCAAAACCAAATAATTATGAACGGACCTTAATGTTTAGAAGCAATTAAACACAATCATCAACAATATCTTATTTGATGCAACAAAATTTCTATTTTCCTATTTTTTTTTCAGGACAGGTCATTGGTCAGCATATGAGAAGAATCCAGAGGAGCAAATCTGCCCAACAGTGGTACCAGACCATGTGATCTCCCCTCTTTCTGAGAGCTACTGGGTCCCACATCCTGAAACCGGAGTTTTTGGGCCACAAACAACCCACCACAATTCTATTCCAAACGACACGTCGACTGGTTGTGGCGGCCGGAAAGAGGGCTCGGTTCTAGAACTCCAGGCTTGGTTCCGACACAACGGCCTCGAGGATTCTGAGAAGCCACATTTTCTGTAATAATAATATCTCAACGTCTATGATAAGATAATACGATAATATAAGATCACTGAAATAATATACATATATACCGATTAATAATAAGCTGTTAAGCTTATATGCACTGCACTAGTTAAGAACTTACTATCTATCTTATATTATGAATATCTTAATATTGTGTATTTTGGATTGAGCGTTATGCTTATTTTCAAGCTGTATTATTCTGAATGCATGTGTGTGCTACAGAGAAACTTGGTAATAAGATATGGTTTTAATCTATCCCCAA ACTCACTTCACCCATTACAAAACCACATTAATATTATTTTGAAATCTTCCTCTTTCCATTGCAATTGCATGGCCGCCACTTCGAAGCTTATTATTATTGCTCGACCACTCGCTCATTTGCGGAAGCCAGTCCCTTTTTCTTCGGTTTTCACCCTCCGGACAGGTCATTGGTCAGCATATGAGAAGAATCCAGAGGAGCAAATCTGCCCAACAGTGGTACCAGACCATGTGATCTCCCCTCTTTCTGAGAGCTACTGGGTCCCACATCCTGAAACCGGAGTTTTTGGGCCACAAACAACCCACCACAATTCTATTCCAAACGACACGTCGACTGGTTGTGGCGGCCGGAAAGAGGGCTCGGTTCTAGAACTCCAGGCTTGGTTCCGACACAACGGCCTCGAGGATTCTGAGAAGCCACATTTTCTGTAATAATAATATCTCAACGTCTATGATAAGATAATACGATAATATAAGATCACTGAAATAATATACATATATACCGATTAATAATAAGCTGTTAAGCTTATATGCACTGCACTAGTTAAGAACTTACTATCTATCTTATATTATGAATATCTTAATATTGTGTATTTTGGATTGAGCGTTATGCTTATTTTCAAGCTGTATTATTCTGAATGCATGTGTGTGCTACAGAGAAACTTGGTAATAAGATATGGTTTTAATCTATCCCCAA ATGGCCGCCACTTCGAAGCTTATTATTATTGCTCGACCACTCGCTCATTTGCGGAAGCCAGTCCCTTTTTCTTCGGTTTTCACCCTCCGGACAGGTCATTGGTCAGCATATGAGAAGAATCCAGAGGAGCAAATCTGCCCAACAGTGGTACCAGACCATGTGATCTCCCCTCTTTCTGAGAGCTACTGGGTCCCACATCCTGAAACCGGAGTTTTTGGGCCACAAACAACCCACCACAATTCTATTCCAAACGACACGTCGACTGGTTGTGGCGGCCGGAAAGAGGGCTCGGTTCTAGAACTCCAGGCTTGGTTCCGACACAACGGCCTCGAGGATTCTGAGAAGCCACATTTTCTGTAA MAATSKLIIIARPLAHLRKPVPFSSVFTLRTGHWSAYEKNPEEQICPTVVPDHVISPLSESYWVPHPETGVFGPQTTHHNSIPNDTSTGCGGRKEGSVLELQAWFRHNGLEDSEKPHFL Homology
BLAST of Lcy02g011020 vs. ExPASy Swiss-Prot
Match: F4KFM8 (Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN=At5g17165 PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.2e-18 Identity = 52/119 (43.70%), Postives = 72/119 (60.50%), Query Frame = 0
BLAST of Lcy02g011020 vs. ExPASy TrEMBL
Match: A0A6J1K564 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 GN=LOC111490853 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 3.0e-39 Identity = 84/122 (68.85%), Postives = 94/122 (77.05%), Query Frame = 0
BLAST of Lcy02g011020 vs. ExPASy TrEMBL
Match: A0A6J1H0D3 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662 GN=LOC111459285 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 5.2e-36 Identity = 79/114 (69.30%), Postives = 88/114 (77.19%), Query Frame = 0
BLAST of Lcy02g011020 vs. ExPASy TrEMBL
Match: A0A0A0KRJ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168830 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.5e-30 Identity = 78/129 (60.47%), Postives = 89/129 (68.99%), Query Frame = 0
BLAST of Lcy02g011020 vs. ExPASy TrEMBL
Match: A0A5A7UIY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00300 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 5.8e-27 Identity = 71/132 (53.79%), Postives = 87/132 (65.91%), Query Frame = 0
BLAST of Lcy02g011020 vs. ExPASy TrEMBL
Match: A0A1S4E6U6 (uncharacterized protein LOC103504694 OS=Cucumis melo OX=3656 GN=LOC103504694 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.9e-26 Identity = 69/121 (57.02%), Postives = 82/121 (67.77%), Query Frame = 0
BLAST of Lcy02g011020 vs. NCBI nr
Match: KAG6605657.1 (ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 171.8 bits (434), Expect = 3.6e-39 Identity = 84/122 (68.85%), Postives = 94/122 (77.05%), Query Frame = 0
BLAST of Lcy02g011020 vs. NCBI nr
Match: XP_023532525.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 171.8 bits (434), Expect = 3.6e-39 Identity = 84/122 (68.85%), Postives = 94/122 (77.05%), Query Frame = 0
BLAST of Lcy02g011020 vs. NCBI nr
Match: XP_022995249.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita maxima]) HSP 1 Score: 171.0 bits (432), Expect = 6.1e-39 Identity = 84/122 (68.85%), Postives = 94/122 (77.05%), Query Frame = 0
BLAST of Lcy02g011020 vs. NCBI nr
Match: XP_022957877.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita moschata]) HSP 1 Score: 160.2 bits (404), Expect = 1.1e-35 Identity = 79/114 (69.30%), Postives = 88/114 (77.19%), Query Frame = 0
BLAST of Lcy02g011020 vs. NCBI nr
Match: XP_004143665.1 (late embryogenesis abundant protein At5g17165 [Cucumis sativus]) HSP 1 Score: 141.4 bits (355), Expect = 5.2e-30 Identity = 78/129 (60.47%), Postives = 89/129 (68.99%), Query Frame = 0
BLAST of Lcy02g011020 vs. TAIR 10
Match: AT3G03150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 96.3 bits (238), Expect = 1.8e-20 Identity = 45/88 (51.14%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of Lcy02g011020 vs. TAIR 10
Match: AT5G17165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03150.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.0 bits (232), Expect = 8.9e-20 Identity = 52/119 (43.70%), Postives = 72/119 (60.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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