Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAACACACTAATCCTGGCTCACGAGTAGAGTGGAAAATAAAGACTACACAGAGTGAAGGACATGCCATCCTTACTTCTGTTTTTTGGGCCTTTGGACCTTGCATTGAGGCTTTTAAGTATTGTCGGCCTATCATTCAAATATATGGCACTCACTTATATGGTAAGTATAGAGGAAAGTTATTGATTGCAACTTCGGTTGACTCTAACAGACATTTGCTCCCACTTGCATTTGCCATAGTTGATGAAGAGTGTCGTGACACGTGGGGATGGTTTCTGAAACACCTTAGACAAATTGTTACACACGAGGAGGTATGTTTAATTTCATATCGACATGGTGGTATAATTTTGGCTGTTAATAATCCAAACAATGGATGGACAGGGCCTAAATCTCATCATAGATTTTGCTTACGACATATTGTTAGCAACTTCAATAAAAAATACAAGTCGAAGCAATTGAAAAATTTTGTTTACCGTGCTGGGTGTCAACACCAAGTCCGAAAGTACAACAAGGTTGTCGAAGAGATTAAAGAAATCTGTAGCACTTGTATGAGCTTCTTCAGTAATATTGGTATTGAGAAGTGGACTCAATCACATGATGGAGTGGTTAGGTATGGGTGGATGACCACTAACCTATCAGAGTGCATCAACAGTGTTCTTAAGGGCGCTCGTATGTTGCCAATCACTGCGCTCGCTCAACTTACCTTCTATAGATGTGTAAAATATTTTGAGAGGAGAAGAGAAGAAACCAGAGGCGCTTTGGCTCGAAGAGAGAAATATACTAGGTAATTATAATATTCAAATTACTTTTTTTTTTTATTAGTCAACTTACTTTATTCAAATATACACATCATACTGAATCCAATATTATATTAGGTACGCTCATGATAAGATCGTTAAATGGGCCACAAGATCAAGTAAGCATGAGGTGTTGTCATATGATCGATCCACTGGTGTATTTCACGTGAAAACTGGGCTTCATTATTTCAATGCCAAAGGAGAGAATCTTCAGACTCAGAGGTTAACTGCAGATGAACGCTACTGTTCCTGCAATAAGTGGCAAACCTTTGGCATTCCATGTTCACATTTTATGGCAGTTTGCTCACGCTTGAATTTGAATTATGAAGATTTCATTGAGGACTACTATAAGCTTTCAACGTATACTCAGTGCTACTCTCCTTAG
mRNA sequence
ATGGTGAAACACACTAATCCTGGCTCACGAGTAGAGTGGAAAATAAAGACTACACAGAGTGAAGGACATGCCATCCTTACTTCTGTTTTTTGGGCCTTTGGACCTTGCATTGAGGCTTTTAAGTATTGTCGGCCTATCATTCAAATATATGGCACTCACTTATATGGTAAGTATAGAGGAAAGTTATTGATTGCAACTTCGGTTGACTCTAACAGACATTTGCTCCCACTTGCATTTGCCATAGTTGATGAAGAGTGTCGTGACACGTGGGGATGGTTTCTGAAACACCTTAGACAAATTGTTACACACGAGGAGGTATGTTTAATTTCATATCGACATGGTGGTATAATTTTGGCTGTTAATAATCCAAACAATGGATGGACAGGGCCTAAATCTCATCATAGATTTTGCTTACGACATATTGTTAGCAACTTCAATAAAAAATACAAGTCGAAGCAATTGAAAAATTTTGTTTACCGTGCTGGGTGTCAACACCAAGTCCGAAAGTACAACAAGGTTGTCGAAGAGATTAAAGAAATCTGTAGCACTTGTATGAGCTTCTTCAGTAATATTGGTATTGAGAAGTGGACTCAATCACATGATGGAGTGGTTAGGTATGGGTGGATGACCACTAACCTATCAGAGTGCATCAACAGTGTTCTTAAGGGCGCTCGTATGTTGCCAATCACTGCGCTCGCTCAACTTACCTTCTATAGATGTGTAAAATATTTTGAGAGGAGAAGAGAAGAAACCAGAGGCGCTTTGGCTCGAAGAGAGAAATATACTAGGTACGCTCATGATAAGATCGTTAAATGGGCCACAAGATCAAGTAAGCATGAGGTGTTGTCATATGATCGATCCACTGGTGTATTTCACGTGAAAACTGGGCTTCATTATTTCAATGCCAAAGGAGAGAATCTTCAGACTCAGAGGTTAACTGCAGATGAACGCTACTGTTCCTGCAATAAGTGGCAAACCTTTGGCATTCCATGTTCACATTTTATGGCAGTTTGCTCACGCTTGAATTTGAATTATGAAGATTTCATTGAGGACTACTATAAGCTTTCAACGTATACTCAGTGCTACTCTCCTTAG
Coding sequence (CDS)
ATGGTGAAACACACTAATCCTGGCTCACGAGTAGAGTGGAAAATAAAGACTACACAGAGTGAAGGACATGCCATCCTTACTTCTGTTTTTTGGGCCTTTGGACCTTGCATTGAGGCTTTTAAGTATTGTCGGCCTATCATTCAAATATATGGCACTCACTTATATGGTAAGTATAGAGGAAAGTTATTGATTGCAACTTCGGTTGACTCTAACAGACATTTGCTCCCACTTGCATTTGCCATAGTTGATGAAGAGTGTCGTGACACGTGGGGATGGTTTCTGAAACACCTTAGACAAATTGTTACACACGAGGAGGTATGTTTAATTTCATATCGACATGGTGGTATAATTTTGGCTGTTAATAATCCAAACAATGGATGGACAGGGCCTAAATCTCATCATAGATTTTGCTTACGACATATTGTTAGCAACTTCAATAAAAAATACAAGTCGAAGCAATTGAAAAATTTTGTTTACCGTGCTGGGTGTCAACACCAAGTCCGAAAGTACAACAAGGTTGTCGAAGAGATTAAAGAAATCTGTAGCACTTGTATGAGCTTCTTCAGTAATATTGGTATTGAGAAGTGGACTCAATCACATGATGGAGTGGTTAGGTATGGGTGGATGACCACTAACCTATCAGAGTGCATCAACAGTGTTCTTAAGGGCGCTCGTATGTTGCCAATCACTGCGCTCGCTCAACTTACCTTCTATAGATGTGTAAAATATTTTGAGAGGAGAAGAGAAGAAACCAGAGGCGCTTTGGCTCGAAGAGAGAAATATACTAGGTACGCTCATGATAAGATCGTTAAATGGGCCACAAGATCAAGTAAGCATGAGGTGTTGTCATATGATCGATCCACTGGTGTATTTCACGTGAAAACTGGGCTTCATTATTTCAATGCCAAAGGAGAGAATCTTCAGACTCAGAGGTTAACTGCAGATGAACGCTACTGTTCCTGCAATAAGTGGCAAACCTTTGGCATTCCATGTTCACATTTTATGGCAGTTTGCTCACGCTTGAATTTGAATTATGAAGATTTCATTGAGGACTACTATAAGCTTTCAACGTATACTCAGTGCTACTCTCCTTAG
Protein sequence
MVKHTNPGSRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCRPIIQIYGTHLYGKYRGKLLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHEEVCLISYRHGGIILAVNNPNNGWTGPKSHHRFCLRHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKEICSTCMSFFSNIGIEKWTQSHDGVVRYGWMTTNLSECINSVLKGARMLPITALAQLTFYRCVKYFERRREETRGALARREKYTRYAHDKIVKWATRSSKHEVLSYDRSTGVFHVKTGLHYFNAKGENLQTQRLTADERYCSCNKWQTFGIPCSHFMAVCSRLNLNYEDFIEDYYKLSTYTQCYSP
Homology
BLAST of Lcy02g010890 vs. ExPASy TrEMBL
Match:
A0A6J1CRF1 (uncharacterized protein LOC111013502 OS=Momordica charantia OX=3673 GN=LOC111013502 PE=4 SV=1)
HSP 1 Score: 509.6 bits (1311), Expect = 1.1e-140
Identity = 237/327 (72.48%), Postives = 273/327 (83.49%), Query Frame = 0
Query: 38 EAFKYCRPIIQIYGTHLYGKYRGKLLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHL 97
+AF+ RP++QI GTHLY KY+GKLLIATSVDSN HLLPLAFAIVDEE R TWGWF K+L
Sbjct: 70 KAFQKFRPMLQIDGTHLYIKYKGKLLIATSVDSNGHLLPLAFAIVDEESRQTWGWFFKNL 129
Query: 98 RQIVTHEEVCLISYRHGGIILAVNNPNNGWTGPKSHHRFCLRHIVSNFNKKYKSKQLKNF 157
R++VTHEE+CLIS RHGGII AVNN +NGWTGPKSHHRFCLRH+ SN N KYK +LK+
Sbjct: 130 RKVVTHEEICLISDRHGGIIXAVNNLDNGWTGPKSHHRFCLRHVSSNSNHKYKCTELKDL 189
Query: 158 VYRAGCQHQVRKYNKVVEEIKEICSTCMSFFSNIGIEKWTQSHDGVVRYGWMTTNLSECI 217
VYRAG Q Q+RKYNK VE IK + S+CM+FF NI IEKWT SHDG RY W TTNLSECI
Sbjct: 190 VYRAGAQFQIRKYNKEVENIKLLNSSCMNFFRNIEIEKWTLSHDGGCRYEWATTNLSECI 249
Query: 218 NSVLKGARMLPITALAQLTFYRCVKYFERRREETRGALARREKYTRYAHDKIVKWATRSS 277
N VLK ARMLPITAL +LT YRCVKYFE+RREETR AL+R EKYTRYA+DK+V+WA RS+
Sbjct: 250 NGVLKRARMLPITALVELTVYRCVKYFEKRREETRDALSRNEKYTRYAYDKLVRWAARST 309
Query: 278 KHEVLSYDRSTGVFHVKTGLHYFNAKGENLQTQRLTADERYCSCNKWQTFGIPCSHFMAV 337
KH V+SYDR GVFHVKTGLHY+N+KG N Q R+TA+E C+CNKWQT+G+PCS+ M V
Sbjct: 310 KHTVVSYDRVVGVFHVKTGLHYYNSKGGNTQIMRITAEECSCTCNKWQTYGMPCSYLMTV 369
Query: 338 CSRLNLNYEDFIEDYYKLSTYTQCYSP 365
CS LN NYED+IED YKLS Y + Y+P
Sbjct: 370 CSHLNFNYEDYIEDPYKLSRYAEAYTP 396
BLAST of Lcy02g010890 vs. ExPASy TrEMBL
Match:
A0A5D3BR89 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00280 PE=4 SV=1)
HSP 1 Score: 492.7 bits (1267), Expect = 1.4e-135
Identity = 223/348 (64.08%), Postives = 271/348 (77.87%), Query Frame = 0
Query: 17 TTQSEGHAILTSVFWAFGPCIEAFKYCRPIIQIYGTHLYGKYRGKLLIATSVDSNRHLLP 76
TT EGH IL+SVFWAFGPCIE+F CRP+IQ + K++I T +DSN H+LP
Sbjct: 5 TTPIEGHVILSSVFWAFGPCIESFSRCRPLIQNRRHSPVWQVSRKVIIVTYIDSNGHILP 64
Query: 77 LAFAIVDEECRDTWGWFLKHLRQIVTHEEVCLISYRHGGIILAVNNPNNGWTGPKSHHRF 136
LAF +V+EE D+WGWFL+HL+QIVTH+EVCL+S RH GII AVNN +NGW HHRF
Sbjct: 65 LAFVVVEEESADSWGWFLRHLKQIVTHDEVCLVSDRHAGIISAVNNLDNGWAEVNCHHRF 124
Query: 137 CLRHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKEICSTCMSFFSNIGIEKW 196
CLRH+VSNF K YK LKN+ YR GCQ Q+RK++K ++++ I S CMSFF +I I+KW
Sbjct: 125 CLRHVVSNFYKSYKFTPLKNYAYRVGCQFQIRKFDKAIQDLMRINSRCMSFFYDIPIKKW 184
Query: 197 TQSHDGVVRYGWMTTNLSECINSVLKGARMLPITALAQLTFYRCVKYFERRREETRGALA 256
TQ+HDG +YGWMTTNLSEC+N V KGARML I A+AQ+TF++CV Y +RREE + L
Sbjct: 185 TQAHDGGFQYGWMTTNLSECMNGVFKGARMLSINAIAQITFFKCVSYL-KRREEIKVVLE 244
Query: 257 RREKYTRYAHDKIVKWATRSSKHEVLSYDRSTGVFHVKTGLHYFNAKGENLQTQRLTADE 316
RR+KYT YA +KI+KW+ RSSKHEV SYDRS G+FHVKTG H N+K N+Q RL+A E
Sbjct: 245 RRDKYTGYALEKILKWSVRSSKHEVQSYDRSEGIFHVKTGRHELNSKEGNIQILRLSASE 304
Query: 317 RYCSCNKWQTFGIPCSHFMAVCSRLNLNYEDFIEDYYKLSTYTQCYSP 365
RYCSCNKWQ FGIPCSHFMAVCSR N+NYEDF+EDYYK+ TY CY+P
Sbjct: 305 RYCSCNKWQAFGIPCSHFMAVCSRFNMNYEDFVEDYYKILTYVACYAP 351
BLAST of Lcy02g010890 vs. ExPASy TrEMBL
Match:
A0A1S3C4P2 (uncharacterized protein LOC103496991 OS=Cucumis melo OX=3656 GN=LOC103496991 PE=4 SV=1)
HSP 1 Score: 481.5 bits (1238), Expect = 3.1e-132
Identity = 224/373 (60.05%), Postives = 272/373 (72.92%), Query Frame = 0
Query: 17 TTQSEGHAILTSVFWAFGPCIEAFKYCRPIIQIYGTHLYGKYRGKLLIATSVDSNRHLLP 76
TT EGH IL+SVFWAFGPCIE+F CRP+IQ + K++I T +DSN H+LP
Sbjct: 5 TTPIEGHVILSSVFWAFGPCIESFSRCRPLIQNRRHSPVWQVSRKVIIVTYIDSNGHILP 64
Query: 77 LAFAIVDEECRDTWGWFLKHLRQIVTHEEVCLISYRHGGIILAVNNPNNGWTGPKSHHRF 136
LAF +V+EE D+WGWFL+HL+QIVTH+EVCL+S RH GII AVNN +NGW HHRF
Sbjct: 65 LAFVVVEEESADSWGWFLRHLKQIVTHDEVCLVSDRHAGIISAVNNLDNGWAEVNCHHRF 124
Query: 137 CLRHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKEICSTCMSFFSNIGIEKW 196
CLRH+VSNF K YK LKN+ YR GCQ Q+RK++K ++++ I S CMSFF +I I+KW
Sbjct: 125 CLRHVVSNFYKSYKFTPLKNYAYRVGCQFQIRKFDKAIQDLMRINSRCMSFFYDIPIKKW 184
Query: 197 TQSHDGVVRYGWMTTNLSECINSVLKGARMLPITALAQLTFYRCVKYFERRREETRGALA 256
TQ+HDG +YGWMTTNLSEC+N V KGARML I A+AQ+TF++CV Y +RREE + L
Sbjct: 185 TQAHDGGFQYGWMTTNLSECMNGVFKGARMLSINAIAQITFFKCVSYL-KRREEIKVVLE 244
Query: 257 RREKYT-------------------------RYAHDKIVKWATRSSKHEVLSYDRSTGVF 316
RR+KYT RYA +KI+KW+ RSSKHEV SYDRS G+F
Sbjct: 245 RRDKYTGYGFLNFTVGNRSYGVHVILIASIFRYALEKILKWSVRSSKHEVQSYDRSEGIF 304
Query: 317 HVKTGLHYFNAKGENLQTQRLTADERYCSCNKWQTFGIPCSHFMAVCSRLNLNYEDFIED 365
HVKTG H N+K N+Q RL+A ERYCSCNKWQ FGIPCSHFMAVCSR N+NYEDF+ED
Sbjct: 305 HVKTGRHELNSKEGNIQILRLSASERYCSCNKWQAFGIPCSHFMAVCSRFNMNYEDFVED 364
BLAST of Lcy02g010890 vs. ExPASy TrEMBL
Match:
A0A5D3BS92 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00230 PE=4 SV=1)
HSP 1 Score: 424.5 bits (1090), Expect = 4.5e-115
Identity = 201/364 (55.22%), Postives = 259/364 (71.15%), Query Frame = 0
Query: 2 VKHTNPGSRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCRPIIQIYGTHLYGKYRGK 61
V H NPG+RV+W + G I VFWAFGP IE FKYCRP+IQI GTHLYGKY+GK
Sbjct: 234 VVHYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGK 293
Query: 62 LLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHEE-VCLISYRHGGIILAV 121
+L A S+D+N H+ PLAFAIV+ E +W WFL LRQ VT + +CLIS RH GI+ A+
Sbjct: 294 MLTALSIDANGHIFPLAFAIVEGENASSWSWFLYALRQYVTDRDGICLISDRHRGILSAI 353
Query: 122 NNPNNGWTGPKSHHRFCLRHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKEI 181
NN GW+ P++ HR+CLRH+ SNFN KYKSKQLK+ V+RAG QHQ RK+ + ++EIK++
Sbjct: 354 NNEEIGWSEPRAFHRYCLRHVASNFNNKYKSKQLKDLVFRAGNQHQRRKFIRNMKEIKQL 413
Query: 182 CSTCMSFFSNIGIEKWTQSHDGVVRYGWMTTNLSECINSVLKGARMLPITALAQLTFYRC 241
C+ FF +I ++KWTQSHD RYGWMT+N +EC+N V KGARMLP+T+L +LTFYR
Sbjct: 414 NPECLEFFEDIDLQKWTQSHDNGYRYGWMTSNAAECMNGVFKGARMLPMTSLVRLTFYRT 473
Query: 242 VKYFERRREETRGALARREKYTRYAHDKIVKWATRSSKHEVLSYDRSTGVFHVKTGLHYF 301
+ YFERRR E A+ R E YT YA K+ KW TR+S H V S DR T F V TG+
Sbjct: 474 ILYFERRRAEISEAVDRGEVYTEYAMKKLKKWETRASAHSVTSIDRETQTFEVHTGMSMI 533
Query: 302 NA-KGENLQTQRLTADERYCSCNKWQTFGIPCSHFMAVCSRLNLNYEDFIEDYYKLSTYT 361
+ KG++ TQ ++ E CSCNKWQ+F IPCSH +AVC+ ++L Y +I++ Y LS +
Sbjct: 534 SPYKGQH--TQVVSLMEGTCSCNKWQSFKIPCSHVIAVCNYMHLTYAAYIDECYLLSNFK 593
Query: 362 QCYS 364
QCY+
Sbjct: 594 QCYA 595
BLAST of Lcy02g010890 vs. ExPASy TrEMBL
Match:
A0A5A7TN56 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00290 PE=4 SV=1)
HSP 1 Score: 423.3 bits (1087), Expect = 1.0e-114
Identity = 200/364 (54.95%), Postives = 259/364 (71.15%), Query Frame = 0
Query: 2 VKHTNPGSRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCRPIIQIYGTHLYGKYRGK 61
V H NPG+RV+W + G I VFWAFGP IE FKYCRP+IQI GTHLYGKY+GK
Sbjct: 234 VVHYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGK 293
Query: 62 LLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHEE-VCLISYRHGGIILAV 121
+L A S+D+N H+ PLAFAIV+ E +W WFL LRQ VT + +CLIS RH GI+ A+
Sbjct: 294 MLTALSIDANGHIFPLAFAIVEGENASSWSWFLYALRQYVTDRDGICLISDRHRGILSAI 353
Query: 122 NNPNNGWTGPKSHHRFCLRHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKEI 181
NN GW+ P++ HR+CLRH+ SNFN KYKSKQLK+ V+RAG QHQ RK+ + ++EIK++
Sbjct: 354 NNEEIGWSEPRAFHRYCLRHVASNFNNKYKSKQLKDLVFRAGNQHQRRKFIRNMKEIKQL 413
Query: 182 CSTCMSFFSNIGIEKWTQSHDGVVRYGWMTTNLSECINSVLKGARMLPITALAQLTFYRC 241
C+ FF +I ++KWTQSHD RYGWMT+N +EC+N V KGARMLP+T+L +LTFYR
Sbjct: 414 NPECLEFFEDIDLQKWTQSHDNGYRYGWMTSNAAECMNGVFKGARMLPMTSLVRLTFYRT 473
Query: 242 VKYFERRREETRGALARREKYTRYAHDKIVKWATRSSKHEVLSYDRSTGVFHVKTGLHYF 301
+ YFERRR E A+ R E YT YA K+ +W TR+S H V S DR T F V TG+
Sbjct: 474 ILYFERRRAEISEAVDRGEVYTEYAMKKLKRWETRASAHSVTSIDRETQTFEVHTGMSMI 533
Query: 302 NA-KGENLQTQRLTADERYCSCNKWQTFGIPCSHFMAVCSRLNLNYEDFIEDYYKLSTYT 361
+ KG++ TQ ++ E CSCNKWQ+F IPCSH +AVC+ ++L Y +I++ Y LS +
Sbjct: 534 SPYKGQH--TQVVSLMEGTCSCNKWQSFKIPCSHVIAVCNYMHLTYAAYIDECYLLSNFK 593
Query: 362 QCYS 364
QCY+
Sbjct: 594 QCYA 595
BLAST of Lcy02g010890 vs. NCBI nr
Match:
XP_022143642.1 (uncharacterized protein LOC111013502 [Momordica charantia])
HSP 1 Score: 509.6 bits (1311), Expect = 2.2e-140
Identity = 237/327 (72.48%), Postives = 273/327 (83.49%), Query Frame = 0
Query: 38 EAFKYCRPIIQIYGTHLYGKYRGKLLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHL 97
+AF+ RP++QI GTHLY KY+GKLLIATSVDSN HLLPLAFAIVDEE R TWGWF K+L
Sbjct: 70 KAFQKFRPMLQIDGTHLYIKYKGKLLIATSVDSNGHLLPLAFAIVDEESRQTWGWFFKNL 129
Query: 98 RQIVTHEEVCLISYRHGGIILAVNNPNNGWTGPKSHHRFCLRHIVSNFNKKYKSKQLKNF 157
R++VTHEE+CLIS RHGGII AVNN +NGWTGPKSHHRFCLRH+ SN N KYK +LK+
Sbjct: 130 RKVVTHEEICLISDRHGGIIXAVNNLDNGWTGPKSHHRFCLRHVSSNSNHKYKCTELKDL 189
Query: 158 VYRAGCQHQVRKYNKVVEEIKEICSTCMSFFSNIGIEKWTQSHDGVVRYGWMTTNLSECI 217
VYRAG Q Q+RKYNK VE IK + S+CM+FF NI IEKWT SHDG RY W TTNLSECI
Sbjct: 190 VYRAGAQFQIRKYNKEVENIKLLNSSCMNFFRNIEIEKWTLSHDGGCRYEWATTNLSECI 249
Query: 218 NSVLKGARMLPITALAQLTFYRCVKYFERRREETRGALARREKYTRYAHDKIVKWATRSS 277
N VLK ARMLPITAL +LT YRCVKYFE+RREETR AL+R EKYTRYA+DK+V+WA RS+
Sbjct: 250 NGVLKRARMLPITALVELTVYRCVKYFEKRREETRDALSRNEKYTRYAYDKLVRWAARST 309
Query: 278 KHEVLSYDRSTGVFHVKTGLHYFNAKGENLQTQRLTADERYCSCNKWQTFGIPCSHFMAV 337
KH V+SYDR GVFHVKTGLHY+N+KG N Q R+TA+E C+CNKWQT+G+PCS+ M V
Sbjct: 310 KHTVVSYDRVVGVFHVKTGLHYYNSKGGNTQIMRITAEECSCTCNKWQTYGMPCSYLMTV 369
Query: 338 CSRLNLNYEDFIEDYYKLSTYTQCYSP 365
CS LN NYED+IED YKLS Y + Y+P
Sbjct: 370 CSHLNFNYEDYIEDPYKLSRYAEAYTP 396
BLAST of Lcy02g010890 vs. NCBI nr
Match:
TYK01705.1 (uncharacterized protein E5676_scaffold775G00280 [Cucumis melo var. makuwa])
HSP 1 Score: 492.7 bits (1267), Expect = 2.8e-135
Identity = 223/348 (64.08%), Postives = 271/348 (77.87%), Query Frame = 0
Query: 17 TTQSEGHAILTSVFWAFGPCIEAFKYCRPIIQIYGTHLYGKYRGKLLIATSVDSNRHLLP 76
TT EGH IL+SVFWAFGPCIE+F CRP+IQ + K++I T +DSN H+LP
Sbjct: 5 TTPIEGHVILSSVFWAFGPCIESFSRCRPLIQNRRHSPVWQVSRKVIIVTYIDSNGHILP 64
Query: 77 LAFAIVDEECRDTWGWFLKHLRQIVTHEEVCLISYRHGGIILAVNNPNNGWTGPKSHHRF 136
LAF +V+EE D+WGWFL+HL+QIVTH+EVCL+S RH GII AVNN +NGW HHRF
Sbjct: 65 LAFVVVEEESADSWGWFLRHLKQIVTHDEVCLVSDRHAGIISAVNNLDNGWAEVNCHHRF 124
Query: 137 CLRHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKEICSTCMSFFSNIGIEKW 196
CLRH+VSNF K YK LKN+ YR GCQ Q+RK++K ++++ I S CMSFF +I I+KW
Sbjct: 125 CLRHVVSNFYKSYKFTPLKNYAYRVGCQFQIRKFDKAIQDLMRINSRCMSFFYDIPIKKW 184
Query: 197 TQSHDGVVRYGWMTTNLSECINSVLKGARMLPITALAQLTFYRCVKYFERRREETRGALA 256
TQ+HDG +YGWMTTNLSEC+N V KGARML I A+AQ+TF++CV Y +RREE + L
Sbjct: 185 TQAHDGGFQYGWMTTNLSECMNGVFKGARMLSINAIAQITFFKCVSYL-KRREEIKVVLE 244
Query: 257 RREKYTRYAHDKIVKWATRSSKHEVLSYDRSTGVFHVKTGLHYFNAKGENLQTQRLTADE 316
RR+KYT YA +KI+KW+ RSSKHEV SYDRS G+FHVKTG H N+K N+Q RL+A E
Sbjct: 245 RRDKYTGYALEKILKWSVRSSKHEVQSYDRSEGIFHVKTGRHELNSKEGNIQILRLSASE 304
Query: 317 RYCSCNKWQTFGIPCSHFMAVCSRLNLNYEDFIEDYYKLSTYTQCYSP 365
RYCSCNKWQ FGIPCSHFMAVCSR N+NYEDF+EDYYK+ TY CY+P
Sbjct: 305 RYCSCNKWQAFGIPCSHFMAVCSRFNMNYEDFVEDYYKILTYVACYAP 351
BLAST of Lcy02g010890 vs. NCBI nr
Match:
XP_008457265.1 (PREDICTED: uncharacterized protein LOC103496991 [Cucumis melo])
HSP 1 Score: 481.5 bits (1238), Expect = 6.5e-132
Identity = 224/373 (60.05%), Postives = 272/373 (72.92%), Query Frame = 0
Query: 17 TTQSEGHAILTSVFWAFGPCIEAFKYCRPIIQIYGTHLYGKYRGKLLIATSVDSNRHLLP 76
TT EGH IL+SVFWAFGPCIE+F CRP+IQ + K++I T +DSN H+LP
Sbjct: 5 TTPIEGHVILSSVFWAFGPCIESFSRCRPLIQNRRHSPVWQVSRKVIIVTYIDSNGHILP 64
Query: 77 LAFAIVDEECRDTWGWFLKHLRQIVTHEEVCLISYRHGGIILAVNNPNNGWTGPKSHHRF 136
LAF +V+EE D+WGWFL+HL+QIVTH+EVCL+S RH GII AVNN +NGW HHRF
Sbjct: 65 LAFVVVEEESADSWGWFLRHLKQIVTHDEVCLVSDRHAGIISAVNNLDNGWAEVNCHHRF 124
Query: 137 CLRHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKEICSTCMSFFSNIGIEKW 196
CLRH+VSNF K YK LKN+ YR GCQ Q+RK++K ++++ I S CMSFF +I I+KW
Sbjct: 125 CLRHVVSNFYKSYKFTPLKNYAYRVGCQFQIRKFDKAIQDLMRINSRCMSFFYDIPIKKW 184
Query: 197 TQSHDGVVRYGWMTTNLSECINSVLKGARMLPITALAQLTFYRCVKYFERRREETRGALA 256
TQ+HDG +YGWMTTNLSEC+N V KGARML I A+AQ+TF++CV Y +RREE + L
Sbjct: 185 TQAHDGGFQYGWMTTNLSECMNGVFKGARMLSINAIAQITFFKCVSYL-KRREEIKVVLE 244
Query: 257 RREKYT-------------------------RYAHDKIVKWATRSSKHEVLSYDRSTGVF 316
RR+KYT RYA +KI+KW+ RSSKHEV SYDRS G+F
Sbjct: 245 RRDKYTGYGFLNFTVGNRSYGVHVILIASIFRYALEKILKWSVRSSKHEVQSYDRSEGIF 304
Query: 317 HVKTGLHYFNAKGENLQTQRLTADERYCSCNKWQTFGIPCSHFMAVCSRLNLNYEDFIED 365
HVKTG H N+K N+Q RL+A ERYCSCNKWQ FGIPCSHFMAVCSR N+NYEDF+ED
Sbjct: 305 HVKTGRHELNSKEGNIQILRLSASERYCSCNKWQAFGIPCSHFMAVCSRFNMNYEDFVED 364
BLAST of Lcy02g010890 vs. NCBI nr
Match:
TYK02543.1 (uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa])
HSP 1 Score: 424.5 bits (1090), Expect = 9.4e-115
Identity = 201/364 (55.22%), Postives = 259/364 (71.15%), Query Frame = 0
Query: 2 VKHTNPGSRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCRPIIQIYGTHLYGKYRGK 61
V H NPG+RV+W + G I VFWAFGP IE FKYCRP+IQI GTHLYGKY+GK
Sbjct: 234 VVHYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGK 293
Query: 62 LLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHEE-VCLISYRHGGIILAV 121
+L A S+D+N H+ PLAFAIV+ E +W WFL LRQ VT + +CLIS RH GI+ A+
Sbjct: 294 MLTALSIDANGHIFPLAFAIVEGENASSWSWFLYALRQYVTDRDGICLISDRHRGILSAI 353
Query: 122 NNPNNGWTGPKSHHRFCLRHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKEI 181
NN GW+ P++ HR+CLRH+ SNFN KYKSKQLK+ V+RAG QHQ RK+ + ++EIK++
Sbjct: 354 NNEEIGWSEPRAFHRYCLRHVASNFNNKYKSKQLKDLVFRAGNQHQRRKFIRNMKEIKQL 413
Query: 182 CSTCMSFFSNIGIEKWTQSHDGVVRYGWMTTNLSECINSVLKGARMLPITALAQLTFYRC 241
C+ FF +I ++KWTQSHD RYGWMT+N +EC+N V KGARMLP+T+L +LTFYR
Sbjct: 414 NPECLEFFEDIDLQKWTQSHDNGYRYGWMTSNAAECMNGVFKGARMLPMTSLVRLTFYRT 473
Query: 242 VKYFERRREETRGALARREKYTRYAHDKIVKWATRSSKHEVLSYDRSTGVFHVKTGLHYF 301
+ YFERRR E A+ R E YT YA K+ KW TR+S H V S DR T F V TG+
Sbjct: 474 ILYFERRRAEISEAVDRGEVYTEYAMKKLKKWETRASAHSVTSIDRETQTFEVHTGMSMI 533
Query: 302 NA-KGENLQTQRLTADERYCSCNKWQTFGIPCSHFMAVCSRLNLNYEDFIEDYYKLSTYT 361
+ KG++ TQ ++ E CSCNKWQ+F IPCSH +AVC+ ++L Y +I++ Y LS +
Sbjct: 534 SPYKGQH--TQVVSLMEGTCSCNKWQSFKIPCSHVIAVCNYMHLTYAAYIDECYLLSNFK 593
Query: 362 QCYS 364
QCY+
Sbjct: 594 QCYA 595
BLAST of Lcy02g010890 vs. NCBI nr
Match:
KAA0044308.1 (uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa])
HSP 1 Score: 423.3 bits (1087), Expect = 2.1e-114
Identity = 200/364 (54.95%), Postives = 259/364 (71.15%), Query Frame = 0
Query: 2 VKHTNPGSRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCRPIIQIYGTHLYGKYRGK 61
V H NPG+RV+W + G I VFWAFGP IE FKYCRP+IQI GTHLYGKY+GK
Sbjct: 234 VVHYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGK 293
Query: 62 LLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHEE-VCLISYRHGGIILAV 121
+L A S+D+N H+ PLAFAIV+ E +W WFL LRQ VT + +CLIS RH GI+ A+
Sbjct: 294 MLTALSIDANGHIFPLAFAIVEGENASSWSWFLYALRQYVTDRDGICLISDRHRGILSAI 353
Query: 122 NNPNNGWTGPKSHHRFCLRHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKEI 181
NN GW+ P++ HR+CLRH+ SNFN KYKSKQLK+ V+RAG QHQ RK+ + ++EIK++
Sbjct: 354 NNEEIGWSEPRAFHRYCLRHVASNFNNKYKSKQLKDLVFRAGNQHQRRKFIRNMKEIKQL 413
Query: 182 CSTCMSFFSNIGIEKWTQSHDGVVRYGWMTTNLSECINSVLKGARMLPITALAQLTFYRC 241
C+ FF +I ++KWTQSHD RYGWMT+N +EC+N V KGARMLP+T+L +LTFYR
Sbjct: 414 NPECLEFFEDIDLQKWTQSHDNGYRYGWMTSNAAECMNGVFKGARMLPMTSLVRLTFYRT 473
Query: 242 VKYFERRREETRGALARREKYTRYAHDKIVKWATRSSKHEVLSYDRSTGVFHVKTGLHYF 301
+ YFERRR E A+ R E YT YA K+ +W TR+S H V S DR T F V TG+
Sbjct: 474 ILYFERRRAEISEAVDRGEVYTEYAMKKLKRWETRASAHSVTSIDRETQTFEVHTGMSMI 533
Query: 302 NA-KGENLQTQRLTADERYCSCNKWQTFGIPCSHFMAVCSRLNLNYEDFIEDYYKLSTYT 361
+ KG++ TQ ++ E CSCNKWQ+F IPCSH +AVC+ ++L Y +I++ Y LS +
Sbjct: 534 SPYKGQH--TQVVSLMEGTCSCNKWQSFKIPCSHVIAVCNYMHLTYAAYIDECYLLSNFK 593
Query: 362 QCYS 364
QCY+
Sbjct: 594 QCYA 595
BLAST of Lcy02g010890 vs. TAIR 10
Match:
AT1G64260.1 (MuDR family transposase )
HSP 1 Score: 181.4 bits (459), Expect = 1.3e-45
Identity = 105/363 (28.93%), Postives = 181/363 (49.86%), Query Frame = 0
Query: 4 HTNPGSRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCRPIIQIYGTHLYGKYRGKLL 63
H++ G V+W+ + A VFW+F IE F++CRP+I + L GKY+ KL+
Sbjct: 336 HSSNGLLVDWQYDLFPNPDFASFRGVFWSFSQSIEGFQHCRPLIVVDTKSLNGKYQLKLM 395
Query: 64 IATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVT-HEEVCLISYRHGGIILAVNN 123
IA+ VD+ PLAFA+ E D+W WF +R+ VT +++CLIS I+ VN
Sbjct: 396 IASGVDAANKFFPLAFAVTKEVSTDSWRWFFTKIREKVTQRKDLCLISSPLRDIVAVVNE 455
Query: 124 PNNGWTGPKSHHRFCLRHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKEICS 183
P + W P +HH+FCL H+ S F ++ L++ V +AG +Q +++ + +IKE
Sbjct: 456 PGSLWQEPWAHHKFCLNHLRSQFLGVFRDYNLESLVEQAGSTNQKEEFDSYMNDIKEKNP 515
Query: 184 TCMSFFSNIGIEKWTQSHDGVVRYGWMTTNLSECINSVLKGAR--MLPITALAQLTFYRC 243
+ I KW +HD +RYG + + E + +V +G + +T L F
Sbjct: 516 EAWKWLDQIPRHKWALAHDSGLRYGIIEID-REALFAVCRGFPYCTVAMTGGVMLMFDEL 575
Query: 244 VKYFERRREETRGALARREKYTRYAHDKIVKWATRSSKHEVLSYDRSTGVFHVKTGLHYF 303
F++ +L R YT DK+ ++ T S + + +R + F V
Sbjct: 576 RSSFDKSLSSIYSSLNRGVVYTEPFMDKLEEFMTDSIPYVITQLERDS--FKV------- 635
Query: 304 NAKGENLQTQRLTADERYCSCNKWQTFGIPCSHFMAVCSRLNLNYEDFIEDYYKLSTYTQ 363
++ + + + C+C K+Q++ PC H +AV +L +N ++++ Y + Y +
Sbjct: 636 -SESSEKEEWIVQLNVSTCTCRKFQSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYCK 687
BLAST of Lcy02g010890 vs. TAIR 10
Match:
AT1G49920.1 (MuDR family transposase )
HSP 1 Score: 176.4 bits (446), Expect = 4.2e-44
Identity = 107/372 (28.76%), Postives = 179/372 (48.12%), Query Frame = 0
Query: 2 VKHTNPGSRVEWKIKT-TQSEGHAILTSVFWAFGPCIEAFKYCRPIIQIYGTHLYGKYRG 61
V H++ G V+W+ + T HA +FWAF I+ F++CRP+I + +L GKY+
Sbjct: 336 VLHSSNGLLVDWQYDSLTHDPEHASFRGLFWAFSQSIQGFQHCRPLIVVDTKNLGGKYKM 395
Query: 62 KLLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHEE-VCLISYRHGGIILA 121
KL+IA++ D+ PLAFA+ E D+W WFL +R+ VT + +CLIS I+
Sbjct: 396 KLMIASAFDATNQYFPLAFAVTKEVSVDSWRWFLTRIREKVTQRQGICLISSPDPDILAV 455
Query: 122 VNNPNNGWTGPKSHHRFCLRHIVSNFNKKYK--SKQLKNFVYRAGCQHQVRKYNKVVEEI 181
+N P + W P ++HRFCL H+ S + V AG Q +++ ++EI
Sbjct: 456 INEPGSQWKEPWAYHRFCLYHLCSKLCSVSPGFDYNMHFLVDEAGSSSQKEEFDSYMKEI 515
Query: 182 KEICSTCMSFFSNIGIEKWTQSHDGVVRYGWMTTNLSECINSVLKGARMLPITALAQLTF 241
KE + +W +HD RYG M + +E + +V K R + + L F
Sbjct: 516 KERNPEAWKWLDQFPPHQWALAHDDGRRYGIMRID-TEALFAVCKRFRKVAMAGGVMLLF 575
Query: 242 YRCVKYFERRREETRGALARREKYTRYAHDKIVKWATRSSKHEVLSYDRSTGVFHV---- 301
+ F + +RG+L + YT + +K+ ++ T S + + V
Sbjct: 576 GQLKDAFAESFKLSRGSLKHGDVYTEHVMEKLEEFETDSDTWVITITPLERDAYQVSMAP 635
Query: 302 --KTGLHYFNAKGENLQTQRLTADERYCSCNKWQTFGIPCSHFMAVCSRLNLNYEDFIED 361
KT L + + + + ++ C+C ++Q PC H +AVC L +N +++D
Sbjct: 636 KKKTRL---MGQSNDSTSGIVQLNDTTCTCGEFQKNKFPCLHALAVCDELKINPLQYVDD 695
Query: 362 YYKLSTYTQCYS 364
Y + Y + YS
Sbjct: 696 CYTVERYHKTYS 703
BLAST of Lcy02g010890 vs. TAIR 10
Match:
AT1G64255.1 (MuDR family transposase )
HSP 1 Score: 171.4 bits (433), Expect = 1.3e-42
Identity = 109/360 (30.28%), Postives = 167/360 (46.39%), Query Frame = 0
Query: 8 GSRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCRPIIQIYGTHLYGKYRGKLLIATS 67
G V+WK + A VFWAF IE F++CRP+I + +L +Y+ KL+IA+
Sbjct: 347 GLLVDWKYDLFPNPNFASFCGVFWAFPQSIEGFQHCRPLIVVDTKNLNCEYQLKLMIASG 406
Query: 68 VDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHEE-VCLISYRHGGIILAVNNPNNG 127
VD+ PLAFA+ E D W WFL +R+ VT + +CLIS H II VN +
Sbjct: 407 VDAANKYFPLAFAVTKEVSTDIWRWFLTGIREKVTQRKGLCLISSPHPDIIAVVNESGSQ 466
Query: 128 WTGPKSHHRFCLRHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKEICSTCMS 187
W P ++HRF L H S F++ + S L + RAG Q ++ + +IKE
Sbjct: 467 WQEPWAYHRFSLNHFYSQFSRVFPSFCLGARIRRAGSTSQKDEFVSYMNDIKEKNPEARK 526
Query: 188 FFSNIGIEKWTQSHDGVVRYGWMTTN---LSECINSVLKGARMLPITALAQLTFYRCVKY 247
+ +W +HD RYG M N L N+ + + +T L F
Sbjct: 527 WLDQFPQNRWALAHDNGRRYGIMEINTKALFAVCNAFEQAGHV--VTGSVLLLFDELRSK 586
Query: 248 FERRREETRGALARREKYTRYAHDKIVKWATRSSKHEVLSYDRSTGVFHVKTGLHYFNAK 307
F++ +R +L + YT DK+ ++ T + + F V T L K
Sbjct: 587 FDKSFSCSRSSLNCGDVYTEPVMDKLEEFRTTFVTYSYIVTPLDNNAFQVATALD----K 646
Query: 308 GENLQTQRLTADERYCSCNKWQTFGIPCSHFMAVCSRLNLNYEDFIEDYYKLSTYTQCYS 364
GE + + + C+C +Q + PC H +AVC +L N +++D Y L + Y+
Sbjct: 647 GECI----VQLSDCSCTCGDFQRYKFPCLHALAVCKKLKFNPLQYVDDCYTLERLKRTYA 696
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CRF1 | 1.1e-140 | 72.48 | uncharacterized protein LOC111013502 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
| A0A5D3BR89 | 1.4e-135 | 64.08 | SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
| A0A1S3C4P2 | 3.1e-132 | 60.05 | uncharacterized protein LOC103496991 OS=Cucumis melo OX=3656 GN=LOC103496991 PE=... | [more] |
| A0A5D3BS92 | 4.5e-115 | 55.22 | SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
| A0A5A7TN56 | 1.0e-114 | 54.95 | SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022143642.1 | 2.2e-140 | 72.48 | uncharacterized protein LOC111013502 [Momordica charantia] | [more] |
| TYK01705.1 | 2.8e-135 | 64.08 | uncharacterized protein E5676_scaffold775G00280 [Cucumis melo var. makuwa] | [more] |
| XP_008457265.1 | 6.5e-132 | 60.05 | PREDICTED: uncharacterized protein LOC103496991 [Cucumis melo] | [more] |
| TYK02543.1 | 9.4e-115 | 55.22 | uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa] | [more] |
| KAA0044308.1 | 2.1e-114 | 54.95 | uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa] | [more] |
