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Lcy02g010180 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATCAGAGAGAGAGAGAGAGAGGGAGAAAAATGGCGTCGGTTCGAGGAGGTATGAAAGATTTCTACAAGCAAAAGAAAAAGAGTGGAATCTCCAAACCCAACAACAAGGCTTCAAAGCCCTCTTCTAGGAAAACCAAATCTCCGGCAAACTCCGCAACTTTGGGCTCCGGTGGCGTCCAACCGGCGGCTCTTATTTCTCACGGCTTCCTGGATCTTCAAGGTCTCTTTCTCTCTTCTTTTCTGGTCTCTCCAATTCCTCACGTTCCTGGAAAATTATTTTCTTCATTATGTTTCTTGAAACTGCAGTTACTGTTGTGGAGTTTGTGCCTCGCGATTGTGATTTGTGAAGGATTAAGTATGTTGCATTCTACAAGTTTTTGGATATCAATTGCAATTAAGTTATTCAATAGTTGAATTAAATACTCTCAATGTTTGGATCACTTTTAATGTTTCGGATGAAGAATATTATCGAGTTAATGTGTTTAGTCTTATGCCTCGTGATTATGAAGGATTAGGCATGTTGAAGTAATTGGATATTTGAATTAAGACCATCCATTGTCTGGGTTTCTTTAACTTCTGCTTCATGGTTATGAAGGATTAAGCATAGAGTCAAGAGGTTGTGGGATACCAGTTTCTATTAAGTTCTGTAATAGTTGAATTATAGACACCTAATGTTTGGATTTCTTTAAACTTTCGACTGCAATACTGTTATCTGACTTATGTGTTTGGACGTCTGATATGGCGCTATACTGCCGGGATATTTATGTATCTTTTGCTTTGTCGATTTTTATAGACTGCATTTTGTTTCATTTTGTTTTAGATGATTATGGTGAGTCTGAGAATATGGTGAGGCAATTTGACATGAACATGGCCTATGGACCTTGCCTTGGAATGACCAGAATGGAACGGTGGGAGCGTGCCTGTAATCTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCCGGCAAAGTGCAGTTAGAGTGCTTGTGGGATTCCCGAGTTTAAAGACTAGTATGTTAGCTGTGTTATTTTTTATTAATGTATGAAGTGTGTGTTGTGTTTTGGGACAAAATGTTCAGCCTCTGGCTGAAATGATAATCACTTCTCCTATTATGTGAATGGGCTAGAATGTTTACTGATATTAGCTCTCTTGTTATTTACTTTTCAGTTATGTGTTGCAAACGACGAGTAGTTGTATAGTTAAACTTGGTGAATTTTTTCCTTTCCCAATGTTGTTATAATTTGCTCAAATG GATCAGAGAGAGAGAGAGAGAGGGAGAAAAATGGCGTCGGTTCGAGGAGGTATGAAAGATTTCTACAAGCAAAAGAAAAAGAGTGGAATCTCCAAACCCAACAACAAGGCTTCAAAGCCCTCTTCTAGGAAAACCAAATCTCCGGCAAACTCCGCAACTTTGGGCTCCGGTGGCGTCCAACCGGCGGCTCTTATTTCTCACGGCTTCCTGGATCTTCAAGATGATTATGGTGAGTCTGAGAATATGGTGAGGCAATTTGACATGAACATGGCCTATGGACCTTGCCTTGGAATGACCAGAATGGAACGGTGGGAGCGTGCCTGTAATCTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCCGGCAAAGTGCAGTTAGAGTGCTTGTGGGATTCCCGAGTTTAAAGACTAGTATGTTAGCTGTGTTATTTTTTATTAATGTATGAAGTGTGTGTTGTGTTTTGGGACAAAATGTTCAGCCTCTGGCTGAAATGATAATCACTTCTCCTATTATGTGAATGGGCTAGAATGTTTACTGATATTAGCTCTCTTGTTATTTACTTTTCAGTTATGTGTTGCAAACGACGAGTAGTTGTATAGTTAAACTTGGTGAATTTTTTCCTTTCCCAATGTTGTTATAATTTGCTCAAATG ATGGCGTCGGTTCGAGGAGGTATGAAAGATTTCTACAAGCAAAAGAAAAAGAGTGGAATCTCCAAACCCAACAACAAGGCTTCAAAGCCCTCTTCTAGGAAAACCAAATCTCCGGCAAACTCCGCAACTTTGGGCTCCGGTGGCGTCCAACCGGCGGCTCTTATTTCTCACGGCTTCCTGGATCTTCAAGATGATTATGGTGAGTCTGAGAATATGGTGAGGCAATTTGACATGAACATGGCCTATGGACCTTGCCTTGGAATGACCAGAATGGAACGGTGGGAGCGTGCCTGTAATCTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCCGGCAAAGTGCAGTTAGAGTGCTTGTGGGATTCCCGAGTTTAA MASVRGGMKDFYKQKKKSGISKPNNKASKPSSRKTKSPANSATLGSGGVQPAALISHGFLDLQDDYGESENMVRQFDMNMAYGPCLGMTRMERWERACNLGLNPPKDIETLLKAGKVQLECLWDSRV Homology
BLAST of Lcy02g010180 vs. ExPASy Swiss-Prot
Match: Q3T0X9 (DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.8e-08 Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Lcy02g010180 vs. ExPASy Swiss-Prot
Match: Q9HCU8 (DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07 Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of Lcy02g010180 vs. ExPASy Swiss-Prot
Match: Q9CWP8 (DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07 Identity = 22/43 (51.16%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of Lcy02g010180 vs. ExPASy Swiss-Prot
Match: O59835 (DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdm1 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.6e-06 Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0
BLAST of Lcy02g010180 vs. ExPASy TrEMBL
Match: A0A5A7UNL0 (DNA polymerase delta subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00460 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 9.2e-55 Identity = 111/127 (87.40%), Postives = 117/127 (92.13%), Query Frame = 0
BLAST of Lcy02g010180 vs. ExPASy TrEMBL
Match: A0A1S3CT23 (DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 9.2e-55 Identity = 111/127 (87.40%), Postives = 117/127 (92.13%), Query Frame = 0
BLAST of Lcy02g010180 vs. ExPASy TrEMBL
Match: A0A0A0KND6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.9e-52 Identity = 108/127 (85.04%), Postives = 114/127 (89.76%), Query Frame = 0
BLAST of Lcy02g010180 vs. ExPASy TrEMBL
Match: A0A6J1H180 (uncharacterized protein LOC111459143 OS=Cucurbita moschata OX=3662 GN=LOC111459143 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.2e-49 Identity = 104/127 (81.89%), Postives = 111/127 (87.40%), Query Frame = 0
BLAST of Lcy02g010180 vs. ExPASy TrEMBL
Match: A0A6J1K4T3 (uncharacterized protein LOC111491182 OS=Cucurbita maxima OX=3661 GN=LOC111491182 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 2.9e-48 Identity = 102/127 (80.31%), Postives = 110/127 (86.61%), Query Frame = 0
BLAST of Lcy02g010180 vs. NCBI nr
Match: XP_038875328.1 (DNA polymerase delta subunit 4 [Benincasa hispida]) HSP 1 Score: 224.6 bits (571), Expect = 5.0e-55 Identity = 111/127 (87.40%), Postives = 116/127 (91.34%), Query Frame = 0
BLAST of Lcy02g010180 vs. NCBI nr
Match: XP_008467236.1 (PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo] >KAA0055161.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa] >TYK00302.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa]) HSP 1 Score: 222.6 bits (566), Expect = 1.9e-54 Identity = 111/127 (87.40%), Postives = 117/127 (92.13%), Query Frame = 0
BLAST of Lcy02g010180 vs. NCBI nr
Match: XP_004143634.1 (uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical protein Csa_000175 [Cucumis sativus]) HSP 1 Score: 214.9 bits (546), Expect = 3.9e-52 Identity = 108/127 (85.04%), Postives = 114/127 (89.76%), Query Frame = 0
BLAST of Lcy02g010180 vs. NCBI nr
Match: XP_022957680.1 (uncharacterized protein LOC111459143 [Cucurbita moschata]) HSP 1 Score: 205.7 bits (522), Expect = 2.4e-49 Identity = 104/127 (81.89%), Postives = 111/127 (87.40%), Query Frame = 0
BLAST of Lcy02g010180 vs. NCBI nr
Match: XP_023532644.1 (uncharacterized protein LOC111794744 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 204.1 bits (518), Expect = 7.0e-49 Identity = 103/127 (81.10%), Postives = 110/127 (86.61%), Query Frame = 0
BLAST of Lcy02g010180 vs. TAIR 10
Match: AT1G09815.1 (polymerase delta 4 ) HSP 1 Score: 147.1 bits (370), Expect = 9.4e-36 Identity = 77/130 (59.23%), Postives = 93/130 (71.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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